F405174

General Info

Members Datasets Scaffolds Average Seq Length
319 233 638 252

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_1310062|Ga0436360_1310062_408_1223
Length 271
Sequence MEQDRLPPLDCRHEETPMLSRPDASAAVATRPFNNLLRRLNRADYGLLEPHLAKAETRAGDLFYSPGDDVDTVHFPCGPSLVSYVVPHEDGRDVETILVGREGAVGGIVSQGFLPAYTRITVKFGGPFTRLPVVRLEAAKASSLTLRNVFARYADCMLAQIFQSTACNAIHSIEQRAAKWIVSAMERTGNSDTVPLTHEQLATLLGVGRSYTSRVIQIFKAEGILDTRRGAIVVRNREALERRACTCNESVKTHFEEVLRGVYPTEEPASP

Samples

Sample ID Description Type Environment
1 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
72 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
113 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
114 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
115 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
116 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
119 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
120 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
121 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
122 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
123 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
124 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
125 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
126 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
127 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
128 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
129 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
130 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
131 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
134 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
135 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
136 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
137 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
138 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
139 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
140 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
141 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
142 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
143 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
144 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
145 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
146 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
147 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
148 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
149 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
150 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
151 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
152 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
153 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
154 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
155 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
156 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
157 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
158 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
159 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
163 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
164 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
168 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
171 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
172 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
173 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
187 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
188 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
189 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
190 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
193 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
194 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
195 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
196 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
197 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
198 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
199 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
200 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
201 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
202 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
203 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
204 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
205 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
206 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
207 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
208 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
209 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
210 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
211 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
212 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
213 2906610324
214 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
215 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
216 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
217 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
218 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
219 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
220 2922425934
221 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
222 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
223 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
224 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
225 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
226 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
227 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
228 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
229 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
230 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
231 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
232 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
233 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.91
Metatranscriptomes 0.63
Isolates 9.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.33
Nodule 8.46
Rhizoplane 2.82
Rhizosphere 73.67
Stem 0
Stem Tuber 0
Unclassified 0.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436360_1310062 3300039438 Bacteria 3636
2 JGI25406J46586_10011424 3300003203 Bacteria 3895
3 rootH1_10123431 3300003323 Bacteria 5018
4 JGI25404J52841_10020365 3300003659 Bacteria 1437
5 JGI25404J52841_10038371 3300003659 Bacteria 1016
6 Ga0070658_10502700 3300005327 Bacteria 1047
7 Ga0070683_100050137 3300005329 Bacteria 3863
8 Ga0070683_100863520 3300005329 Bacteria 868
9 Ga0070680_100352353 3300005336 Bacteria 1252
10 Ga0068868_100082871 3300005338 Bacteria 2573
11 Ga0070668_100040747 3300005347 Bacteria 3555
12 Ga0070675_100522893 3300005354 Bacteria 1071
13 Ga0070671_100279968 3300005355 Bacteria 1418
14 Ga0070709_10000546 3300005434 Bacteria 22073
15 Ga0070709_10031551 3300005434 Bacteria 3188
16 Ga0070709_10041604 3300005434 Bacteria 2832
17 Ga0070714_100010805 3300005435 Bacteria 7229
18 Ga0070714_100380407 3300005435 Bacteria 1331
19 Ga0070713_100034301 3300005436 Bacteria 4075
20 Ga0070713_100089601 3300005436 Bacteria 2643
21 Ga0070710_10001828 3300005437 Bacteria 10031
22 Ga0070710_10012421 3300005437 Bacteria 4230
23 Ga0070711_100003633 3300005439 Bacteria 9014
24 Ga0070711_100006438 3300005439 Bacteria 7080
25 Ga0070663_100212987 3300005455 Bacteria 1514
26 Ga0070663_100307699 3300005455 Bacteria 1270
27 Ga0070662_100072461 3300005457 Bacteria 2543
28 Ga0070681_10040607 3300005458 Bacteria 4660
29 Ga0070681_10059093 3300005458 Bacteria 3813
30 Ga0070681_10115437 3300005458 Bacteria 2623
31 Ga0070684_100032560 3300005535 Bacteria 4443
32 Ga0068853_100112770 3300005539 Bacteria 2416
33 Ga0068853_100556514 3300005539 Bacteria 1087
34 Ga0070665_100203392 3300005548 Bacteria 1980
35 Ga0068855_100814115 3300005563 Bacteria 992
36 Ga0070664_100212649 3300005564 Bacteria 1728
37 Ga0068857_100169095 3300005577 Bacteria 1986
38 Ga0068856_100086455 3300005614 Bacteria 3115
39 Ga0068859_100161401 3300005617 Bacteria 2320
40 Ga0068864_100071722 3300005618 Bacteria 3017
41 Ga0068861_100158179 3300005719 Bacteria 1866
42 Ga0068863_100437769 3300005841 Bacteria 1282
43 Ga0068858_100225791 3300005842 Bacteria 1774
44 Ga0068860_100226111 3300005843 Bacteria 1818
45 Ga0081455_10012470 3300005937 Bacteria 8480
46 Ga0081540_1009206 3300005983 Bacteria 6811
47 Ga0081540_1015618 3300005983 Bacteria 4800
48 Ga0081540_1023970 3300005983 Bacteria 3553
49 Ga0081540_1025052 3300005983 Bacteria 3446
50 Ga0081540_1142256 3300005983 Bacteria 961
51 Ga0081539_10000966 3300005985 Bacteria 53690
52 Ga0070717_10281006 3300006028 Bacteria 1476
53 Ga0070717_10286432 3300006028 Bacteria 1462
54 Ga0070717_10375292 3300006028 Bacteria 1275
55 Ga0075365_10055242 3300006038 Bacteria 2635
56 Ga0075365_10226720 3300006038 Bacteria 1311
57 Ga0075368_10017939 3300006042 Bacteria 2654
58 Ga0075363_100105660 3300006048 Bacteria 1561
59 Ga0075364_10105512 3300006051 Bacteria 1877
60 Ga0070716_100004958 3300006173 Bacteria 6409
61 Ga0075362_10037757 3300006177 Bacteria 2119
62 Ga0075367_10068347 3300006178 Bacteria 2131
63 Ga0075366_10209080 3300006195 Bacteria 1187
64 Ga0075434_100107166 3300006871 Bacteria 2804
65 Ga0097620_100161398 3300006931 Bacteria 2320
66 Ga0099795_10045042 3300007788 Unclassified 1585
67 Ga0105240_10464439 3300009093 Bacteria 1414
68 Ga0105240_10672238 3300009093 Bacteria 1133
69 Ga0105245_10124124 3300009098 Bacteria 2415
70 Ga0105247_10240564 3300009101 Bacteria 1233
71 Ga0114129_10305913 3300009147 Bacteria 2117
72 Ga0105242_10362391 3300009176 Bacteria 1342
73 Ga0105248_10129537 3300009177 Bacteria 2846
74 Ga0105237_10059962 3300009545 Bacteria 3807
75 Ga0105238_10180917 3300009551 Bacteria 2085
76 Ga0105238_10192608 3300009551 Bacteria 2015
77 Ga0099796_10094581 3300010159 Unclassified 1116
78 Ga0105239_10073980 3300010375 Bacteria 3746
79 Ga0105239_10225072 3300010375 Bacteria 2104
80 Ga0105239_10254719 3300010375 Bacteria 1972
81 Ga0157370_10198436 3300013104 Bacteria 1862
82 Ga0157369_10041788 3300013105 Bacteria 5003
83 Ga0157369_10654105 3300013105 Bacteria 1084
84 Ga0157374_10146993 3300013296 Bacteria 2290
85 Ga0157378_10113063 3300013297 Bacteria 2492
86 Ga0163162_10288485 3300013306 Bacteria 1773
87 Ga0157372_10279409 3300013307 Bacteria 1941
88 Ga0157375_10184671 3300013308 Bacteria 2238
89 Ga0157375_11047068 3300013308 Bacteria 954
90 Ga0163163_10491312 3300014325 Bacteria 1289
91 Ga0157376_10195769 3300014969 Bacteria 1856
92 Ga0206350_11506747 3300020080 Bacteria 1255
93 Ga0206353_11486682 3300020082 Bacteria 905
94 Ga0213876_10002007 3300021384 Bacteria 12182
95 Ga0213876_10031991 3300021384 Bacteria 2775
96 Ga0213876_10175071 3300021384 Bacteria 1142
97 Ga0209148_1010471 3300025254 Bacteria 1758
98 Ga0209233_1013735 3300025261 Bacteria 2305
99 Ga0209455_1006280 3300025272 Bacteria 3534
100 Ga0207692_10000323 3300025898 Bacteria 16534
101 Ga0207692_10003249 3300025898 Bacteria 6324
102 Ga0207647_10057234 3300025904 Bacteria 2391
103 Ga0207699_10000309 3300025906 Bacteria 26099
104 Ga0207699_10030379 3300025906 Bacteria 3022
105 Ga0207699_10033320 3300025906 Bacteria 2911
106 Ga0207654_10047691 3300025911 Bacteria 2448
107 Ga0207707_10035878 3300025912 Bacteria 4336
108 Ga0207707_10178641 3300025912 Bacteria 1853
109 Ga0207707_10545325 3300025912 Bacteria 986
110 Ga0207695_10134253 3300025913 Bacteria 2429
111 Ga0207695_10329910 3300025913 Bacteria 1414
112 Ga0207695_10509472 3300025913 Bacteria 1085
113 Ga0207693_10129976 3300025915 Bacteria 1980
114 Ga0207663_10013085 3300025916 Bacteria 4502
115 Ga0207663_10084804 3300025916 Bacteria 2084
116 Ga0207657_10209979 3300025919 Bacteria 1563
117 Ga0207652_10250122 3300025921 Bacteria 1598
118 Ga0207694_10175514 3300025924 Bacteria 1736
119 Ga0207659_10638431 3300025926 Bacteria 909
120 Ga0207687_10063644 3300025927 Bacteria 2612
121 Ga0207700_10014144 3300025928 Bacteria 5219
122 Ga0207700_10087969 3300025928 Bacteria 2444
123 Ga0207700_10297320 3300025928 Bacteria 1393
124 Ga0207664_10008224 3300025929 Bacteria 7262
125 Ga0207664_10133301 3300025929 Bacteria 2094
126 Ga0207706_10066276 3300025933 Bacteria 3178
127 Ga0207665_10047032 3300025939 Bacteria 2892
128 Ga0207711_10274199 3300025941 Bacteria 1552
129 Ga0207689_10075301 3300025942 Bacteria 2774
130 Ga0207661_10001081 3300025944 Bacteria 18103
131 Ga0207667_10216482 3300025949 Bacteria 1962
132 Ga0207667_10376997 3300025949 Bacteria 1446
133 Ga0207651_10370269 3300025960 Bacteria 1212
134 Ga0207712_10462535 3300025961 Bacteria 1078
135 Ga0207668_10036098 3300025972 Bacteria 3297
136 Ga0207640_10031696 3300025981 Bacteria 3269
137 Ga0207677_10104047 3300026023 Bacteria 2097
138 Ga0207703_10184051 3300026035 Bacteria 1845
139 Ga0207639_10331662 3300026041 Bacteria 1354
140 Ga0207678_10046341 3300026067 Bacteria 3760
141 Ga0207708_10286505 3300026075 Bacteria 1336
142 Ga0207702_10304280 3300026078 Bacteria 1514
143 Ga0207676_10144927 3300026095 Bacteria 2038
144 Ga0207674_10071321 3300026116 Bacteria 3491
145 Ga0207675_100242842 3300026118 Bacteria 1741
146 Ga0207683_10164458 3300026121 Bacteria 2007
147 Ga0207683_10317331 3300026121 Bacteria 1427
148 Ga0207428_10353514 3300027907 Bacteria 1081
149 Ga0268266_10002169 3300028379 Bacteria 21507
150 Ga0268266_10368100 3300028379 Bacteria 1353
151 Ga0268265_10310208 3300028380 Bacteria 1424
152 Ga0268264_10048351 3300028381 Bacteria 3539
153 Ga0265314_10003949 3300031711 Bacteria 14062
154 Ga0307405_10103650 3300031731 Bacteria 1913
155 Ga0307413_10079675 3300031824 Bacteria 2094
156 Ga0307406_10699107 3300031901 Bacteria 846
157 Ga0307407_10175315 3300031903 Bacteria 1416
158 Ga0307411_10044119 3300032005 Bacteria 2857
159 Ga0307415_100168062 3300032126 Bacteria 1707
160 Ga0307415_100168124 3300032126 Bacteria 1707
161 Ga0315911_1000008 3300033442 Bacteria 381285
162 Ga0373926_0008071 3300035083 Bacteria 3506
163 Ga0373944_0020546 3300035089 Bacteria 1904
164 Ga0373923_0007894 3300035111 Bacteria 3764
165 Ga0373936_0052386 3300035113 Bacteria 1653
166 Ga0373945_0023443 3300035116 Bacteria 2132
167 Ga0373954_0015273 3300035118 Bacteria 3432
168 Ga0373955_0017321 3300035172 Bacteria 3564
169 Ga0373931_0245371 3300035691 Bacteria 1087
170 Ga0373935_0020819 3300035692 Bacteria 4012
171 Ga0373927_0028560 3300035695 Bacteria 3639
172 Ga0373927_0044749 3300035695 Bacteria 2863
173 Ga0373947_0019572 3300035725 Bacteria 3903
174 Ga0373925_0012529 3300037068 Bacteria 6143
175 Ga0373925_0047838 3300037068 Bacteria 3185
176 Ga0395898_0017586 3300037466 Bacteria 7296
177 Ga0395898_0066925 3300037466 Bacteria 3479
178 Ga0395898_0373760 3300037466 Bacteria 1359
179 Ga0436364_0121092 3300037853 Bacteria 1639
180 Ga0436364_1404500 3300037853 Bacteria 8733
181 Ga0395901_0401019 3300038443 Bacteria 1409
182 Ga0436365_0166370 3300039437 Bacteria 3180
183 Ga0436365_0363904 3300039437 Bacteria 3294
184 Ga0436365_1302881 3300039437 Bacteria 2011
185 Ga0436365_1389730 3300039437 Bacteria 1373
186 Ga0436365_1537513 3300039437 Bacteria 9667
187 Ga0436361_0951472 3300039447 Bacteria 2940
188 Ga0436363_1339001 3300039450 Bacteria 1135
189 Ga0436363_1361534 3300039450 Bacteria 8627
190 Ga0436363_1451346 3300039450 Bacteria 2147
191 Ga0436362_0047340 3300039453 Bacteria 5483
192 Ga0451843_0199919 3300041509 Bacteria 900
193 Ga0466972_0000254 3300044658 Bacteria 35544
194 Ga0466966_0203651 3300044684 Bacteria 1197
195 Ga0466959_0143027 3300045049 Bacteria 1689
196 Ga0466958_0173612 3300045836 Bacteria 1366
197 Ga0466967_0066678 3300045976 Bacteria 3208
198 Ga0495592_0033867 3300046454 Bacteria 3853
199 Ga0495580_0026703 3300046472 Bacteria 4206
200 Ga0495639_0017393 3300046475 Bacteria 3122
201 Ga0495664_0013737 3300046477 Bacteria 4590
202 Ga0495618_0020228 3300046514 Bacteria 4099
203 Ga0495628_0249242 3300046516 Bacteria 1326
204 Ga0495628_0415114 3300046516 Bacteria 981
205 Ga0495630_0008615 3300046517 Bacteria 7320
206 Ga0495665_0044232 3300046531 Bacteria 2366
207 Ga0495640_0035629 3300046533 Bacteria 3521
208 Ga0495667_0058554 3300046559 Bacteria 2531
209 Ga0495623_0150484 3300046679 Bacteria 1376
210 Ga0495674_0022521 3300047319 Bacteria 5811
211 Ga0495676_0172016 3300047321 Bacteria 1524
212 Ga0495684_0011096 3300047471 Bacteria 6964
213 Ga0495593_0006174 3300047673 Bacteria 7049
214 Ga0496102_0104962 3300048905 Bacteria 2629
215 Ga0496104_0157007 3300048907 Bacteria 2183
216 Ga0496107_0036139 3300048910 Bacteria 3543
217 Ga0496107_0386487 3300048910 Bacteria 1041
218 Ga0496108_0307824 3300048911 Bacteria 1380
219 Ga0496111_0133338 3300048914 Bacteria 1839
220 Ga0496112_0154514 3300048915 Bacteria 2262
221 Ga0496113_0174296 3300048916 Bacteria 1704
222 Ga0496116_0140427 3300048919 Bacteria 1360
223 Ga0496118_0012760 3300048921 Bacteria 8025
224 Ga0496121_0031384 3300048924 Bacteria 4854
225 Ga0496121_0041127 3300048924 Bacteria 4045
226 Ga0496121_0067411 3300048924 Bacteria 2901
227 Ga0496121_0142554 3300048924 Bacteria 1775
228 Ga0496124_0336422 3300048927 Bacteria 1074
229 Ga0496125_0166069 3300048928 Bacteria 1491
230 Ga0496125_0194967 3300048928 Bacteria 1333
231 Ga0496126_0356251 3300048929 Bacteria 1196
232 Ga0496126_0570063 3300048929 Bacteria 896
233 Ga0501031_0139274 3300049568 Bacteria 1585
234 Ga0501032_0213480 3300049569 Bacteria 1257
235 Ga0501033_0336145 3300049570 Bacteria 1059
236 Ga0501034_0131037 3300049571 Bacteria 2490
237 Ga0501036_0117271 3300049572 Bacteria 2248
238 Ga0501036_0381498 3300049572 Bacteria 1176
239 Ga0501037_0147740 3300049573 Bacteria 1681
240 Ga0501037_0173155 3300049573 Bacteria 1533
241 Ga0501037_0324001 3300049573 Bacteria 1066
242 Ga0501037_0465943 3300049573 Bacteria 860
243 Ga0501038_0005755 3300049574 Bacteria 11484
244 Ga0501038_0787224 3300049574 Bacteria 707
245 Ga0501039_0049952 3300049575 Bacteria 3234
246 Ga0501039_0318610 3300049575 Bacteria 1222
247 Ga0501040_0008074 3300049576 Bacteria 6834
248 Ga0501042_0033854 3300049578 Bacteria 3622
249 Ga0501043_0012810 3300049579 Bacteria 6555
250 Ga0501043_0080026 3300049579 Bacteria 2567
251 Ga0501046_0146946 3300049580 Bacteria 1780
252 Ga0501046_0179398 3300049580 Bacteria 1584
253 Ga0501046_0212629 3300049580 Bacteria 1435
254 Ga0501047_0012836 3300049581 Bacteria 7937
255 Ga0501047_0016249 3300049581 Bacteria 7099
256 Ga0501047_0049258 3300049581 Bacteria 4068
257 Ga0501047_0229028 3300049581 Bacteria 1712
258 Ga0501070_0026171 3300049586 Bacteria 4896
259 Ga0501070_0033641 3300049586 Bacteria 4290
260 Ga0501070_0336464 3300049586 Bacteria 1226
261 Ga0501073_0039142 3300049589 Bacteria 3360
262 Ga0501073_0116888 3300049589 Bacteria 1848
263 Ga0501074_0267817 3300049590 Bacteria 1214
264 Ga0501080_0070776 3300049742 Bacteria 3244
265 Ga0501080_0096866 3300049742 Bacteria 2739
266 Ga0501035_0038959 3300049822 Bacteria 4302
267 Ga0501035_0125815 3300049822 Bacteria 2237
268 Ga0501035_0130566 3300049822 Bacteria 2190
269 Ga0501044_0029816 3300049823 Bacteria 5752
270 Ga0501044_0031839 3300049823 Bacteria 5547
271 Ga0501044_0039036 3300049823 Bacteria 4955
272 Ga0501044_0049853 3300049823 Bacteria 4322
273 Ga0501044_0887574 3300049823 Bacteria 767
274 Ga0501045_0151976 3300049824 Bacteria 1722
275 nmdc:mga0yw44_85987_c1 3300050492 Bacteria 1980
276 nmdc:mga0yw44_95027_c1 3300050492 Bacteria 1890
277 nmdc:mga06z11_122962_c1 3300050494 Bacteria 1450
278 nmdc:mga06z11_66805_c1 3300050494 Bacteria 1891
279 nmdc:mga07m45_95536_c1 3300050496 Bacteria 1705
280 nmdc:mga08y16_353742_c1 3300050511 Bacteria 1508
281 nmdc:mga0n895_152152_c1 3300050512 Bacteria 2344
282 nmdc:mga0n895_58761_c1 3300050512 Bacteria 3792
283 Ga0495612_0210888 3300053078 Bacteria 858
284 Ga0500636_0120120 3300053177 Bacteria 1475
285 Ga0501084_0171285 3300054114 Bacteria 1832
286 Ga0501082_0039424 3300060353 Bacteria 4074
287 Ga0501082_0258075 3300060353 Bacteria 1516
288 2509151925 2508501128 Bacteria 8613869
289 2513660776 2513237096 Bacteria 8722461
290 2513863301 2513237137 Bacteria 9558895
291 2513922602 2513237145 Bacteria 8979722
292 2517888953 2517572143 Bacteria 9484767
293 2671122552 2667528175 Bacteria 7532676
294 2793073578 2791355197 Bacteria 8420563
295 2874607976 2874604998 Bacteria 7834745
296 2885383173 2885374607 Bacteria 8927485
297 2903751382 2903748898 Bacteria 9972761
298 2904691099 2904690495 Bacteria 9412302
299 2906612719
300 2906641390 2906635258 Bacteria 8601019
301 2906668730 2906660503 Bacteria 8595048
302 2908747553 2908739725 Bacteria 8628932
303 2908756493 2908756301 Bacteria 8864324
304 2922363915 2922361189 Bacteria 7436256
305 2922392495 2922386360 Bacteria 7017218
306 2922434112
307 2935637039 2935630451 Bacteria 8169952
308 2935776895 2935769743 Bacteria 7878163
309 2935783684 2935777560 Bacteria 8077691
310 2935792847 2935785616 Bacteria 7962367
311 2941513694 2941507105 Bacteria 8166816
312 2941521657 2941515067 Bacteria 8166720
313 2941529394 2941523033 Bacteria 8169134
314 3005475177 3005474847 Bacteria 9259049
315 8016609932 8016603502 Bacteria 8731218
316 8016615007 8016613128 Bacteria 8794220
317 8019562547 8019555841 Bacteria 9642137
318 8019572622 8019565922 Bacteria 9639779
319 8056691053 8056689827 Bacteria 6712655
320 Ga0436360_1310062
321 JGI25406J46586_10011424
322 rootH1_10123431
323 JGI25404J52841_10020365
324 JGI25404J52841_10038371
325 Ga0070658_10502700
326 Ga0070683_100050137
327 Ga0070683_100863520
328 Ga0070680_100352353
329 Ga0068868_100082871
330 Ga0070668_100040747
331 Ga0070675_100522893
332 Ga0070671_100279968
333 Ga0070709_10000546
334 Ga0070709_10031551
335 Ga0070709_10041604
336 Ga0070714_100010805
337 Ga0070714_100380407
338 Ga0070713_100034301
339 Ga0070713_100089601
340 Ga0070710_10001828
341 Ga0070710_10012421
342 Ga0070711_100003633
343 Ga0070711_100006438
344 Ga0070663_100212987
345 Ga0070663_100307699
346 Ga0070662_100072461
347 Ga0070681_10040607
348 Ga0070681_10059093
349 Ga0070681_10115437
350 Ga0070684_100032560
351 Ga0068853_100112770
352 Ga0068853_100556514
353 Ga0070665_100203392
354 Ga0068855_100814115
355 Ga0070664_100212649
356 Ga0068857_100169095
357 Ga0068856_100086455
358 Ga0068859_100161401
359 Ga0068864_100071722
360 Ga0068861_100158179
361 Ga0068863_100437769
362 Ga0068858_100225791
363 Ga0068860_100226111
364 Ga0081455_10012470
365 Ga0081540_1009206
366 Ga0081540_1015618
367 Ga0081540_1023970
368 Ga0081540_1025052
369 Ga0081540_1142256
370 Ga0081539_10000966
371 Ga0070717_10281006
372 Ga0070717_10286432
373 Ga0070717_10375292
374 Ga0075365_10055242
375 Ga0075365_10226720
376 Ga0075368_10017939
377 Ga0075363_100105660
378 Ga0075364_10105512
379 Ga0070716_100004958
380 Ga0075362_10037757
381 Ga0075367_10068347
382 Ga0075366_10209080
383 Ga0075434_100107166
384 Ga0097620_100161398
385 Ga0099795_10045042
386 Ga0105240_10464439
387 Ga0105240_10672238
388 Ga0105245_10124124
389 Ga0105247_10240564
390 Ga0114129_10305913
391 Ga0105242_10362391
392 Ga0105248_10129537
393 Ga0105237_10059962
394 Ga0105238_10180917
395 Ga0105238_10192608
396 Ga0099796_10094581
397 Ga0105239_10073980
398 Ga0105239_10225072
399 Ga0105239_10254719
400 Ga0157370_10198436
401 Ga0157369_10041788
402 Ga0157369_10654105
403 Ga0157374_10146993
404 Ga0157378_10113063
405 Ga0163162_10288485
406 Ga0157372_10279409
407 Ga0157375_10184671
408 Ga0157375_11047068
409 Ga0163163_10491312
410 Ga0157376_10195769
411 Ga0206350_11506747
412 Ga0206353_11486682
413 Ga0213876_10002007
414 Ga0213876_10031991
415 Ga0213876_10175071
416 Ga0209148_1010471
417 Ga0209233_1013735
418 Ga0209455_1006280
419 Ga0207692_10000323
420 Ga0207692_10003249
421 Ga0207647_10057234
422 Ga0207699_10000309
423 Ga0207699_10030379
424 Ga0207699_10033320
425 Ga0207654_10047691
426 Ga0207707_10035878
427 Ga0207707_10178641
428 Ga0207707_10545325
429 Ga0207695_10134253
430 Ga0207695_10329910
431 Ga0207695_10509472
432 Ga0207693_10129976
433 Ga0207663_10013085
434 Ga0207663_10084804
435 Ga0207657_10209979
436 Ga0207652_10250122
437 Ga0207694_10175514
438 Ga0207659_10638431
439 Ga0207687_10063644
440 Ga0207700_10014144
441 Ga0207700_10087969
442 Ga0207700_10297320
443 Ga0207664_10008224
444 Ga0207664_10133301
445 Ga0207706_10066276
446 Ga0207665_10047032
447 Ga0207711_10274199
448 Ga0207689_10075301
449 Ga0207661_10001081
450 Ga0207667_10216482
451 Ga0207667_10376997
452 Ga0207651_10370269
453 Ga0207712_10462535
454 Ga0207668_10036098
455 Ga0207640_10031696
456 Ga0207677_10104047
457 Ga0207703_10184051
458 Ga0207639_10331662
459 Ga0207678_10046341
460 Ga0207708_10286505
461 Ga0207702_10304280
462 Ga0207676_10144927
463 Ga0207674_10071321
464 Ga0207675_100242842
465 Ga0207683_10164458
466 Ga0207683_10317331
467 Ga0207428_10353514
468 Ga0268266_10002169
469 Ga0268266_10368100
470 Ga0268265_10310208
471 Ga0268264_10048351
472 Ga0265314_10003949
473 Ga0307405_10103650
474 Ga0307413_10079675
475 Ga0307406_10699107
476 Ga0307407_10175315
477 Ga0307411_10044119
478 Ga0307415_100168062
479 Ga0307415_100168124
480 Ga0315911_1000008
481 Ga0373926_0008071
482 Ga0373944_0020546
483 Ga0373923_0007894
484 Ga0373936_0052386
485 Ga0373945_0023443
486 Ga0373954_0015273
487 Ga0373955_0017321
488 Ga0373931_0245371
489 Ga0373935_0020819
490 Ga0373927_0028560
491 Ga0373927_0044749
492 Ga0373947_0019572
493 Ga0373925_0012529
494 Ga0373925_0047838
495 Ga0395898_0017586
496 Ga0395898_0066925
497 Ga0395898_0373760
498 Ga0436364_0121092
499 Ga0436364_1404500
500 Ga0395901_0401019
501 Ga0436365_0166370
502 Ga0436365_0363904
503 Ga0436365_1302881
504 Ga0436365_1389730
505 Ga0436365_1537513
506 Ga0436361_0951472
507 Ga0436363_1339001
508 Ga0436363_1361534
509 Ga0436363_1451346
510 Ga0436362_0047340
511 Ga0451843_0199919
512 Ga0466972_0000254
513 Ga0466966_0203651
514 Ga0466959_0143027
515 Ga0466958_0173612
516 Ga0466967_0066678
517 Ga0495592_0033867
518 Ga0495580_0026703
519 Ga0495639_0017393
520 Ga0495664_0013737
521 Ga0495618_0020228
522 Ga0495628_0249242
523 Ga0495628_0415114
524 Ga0495630_0008615
525 Ga0495665_0044232
526 Ga0495640_0035629
527 Ga0495667_0058554
528 Ga0495623_0150484
529 Ga0495674_0022521
530 Ga0495676_0172016
531 Ga0495684_0011096
532 Ga0495593_0006174
533 Ga0496102_0104962
534 Ga0496104_0157007
535 Ga0496107_0036139
536 Ga0496107_0386487
537 Ga0496108_0307824
538 Ga0496111_0133338
539 Ga0496112_0154514
540 Ga0496113_0174296
541 Ga0496116_0140427
542 Ga0496118_0012760
543 Ga0496121_0031384
544 Ga0496121_0041127
545 Ga0496121_0067411
546 Ga0496121_0142554
547 Ga0496124_0336422
548 Ga0496125_0166069
549 Ga0496125_0194967
550 Ga0496126_0356251
551 Ga0496126_0570063
552 Ga0501031_0139274
553 Ga0501032_0213480
554 Ga0501033_0336145
555 Ga0501034_0131037
556 Ga0501036_0117271
557 Ga0501036_0381498
558 Ga0501037_0147740
559 Ga0501037_0173155
560 Ga0501037_0324001
561 Ga0501037_0465943
562 Ga0501038_0005755
563 Ga0501038_0787224
564 Ga0501039_0049952
565 Ga0501039_0318610
566 Ga0501040_0008074
567 Ga0501042_0033854
568 Ga0501043_0012810
569 Ga0501043_0080026
570 Ga0501046_0146946
571 Ga0501046_0179398
572 Ga0501046_0212629
573 Ga0501047_0012836
574 Ga0501047_0016249
575 Ga0501047_0049258
576 Ga0501047_0229028
577 Ga0501070_0026171
578 Ga0501070_0033641
579 Ga0501070_0336464
580 Ga0501073_0039142
581 Ga0501073_0116888
582 Ga0501074_0267817
583 Ga0501080_0070776
584 Ga0501080_0096866
585 Ga0501035_0038959
586 Ga0501035_0125815
587 Ga0501035_0130566
588 Ga0501044_0029816
589 Ga0501044_0031839
590 Ga0501044_0039036
591 Ga0501044_0049853
592 Ga0501044_0887574
593 Ga0501045_0151976
594 nmdc:mga0yw44_85987_c1
595 nmdc:mga0yw44_95027_c1
596 nmdc:mga06z11_122962_c1
597 nmdc:mga06z11_66805_c1
598 nmdc:mga07m45_95536_c1
599 nmdc:mga08y16_353742_c1
600 nmdc:mga0n895_152152_c1
601 nmdc:mga0n895_58761_c1
602 Ga0495612_0210888
603 Ga0500636_0120120
604 Ga0501084_0171285
605 Ga0501082_0039424
606 Ga0501082_0258075
607 2509151925
608 2513660776
609 2513863301
610 2513922602
611 2517888953
612 2671122552
613 2793073578
614 2874607976
615 2885383173
616 2903751382
617 2904691099
618 2906612719
619 2906641390
620 2906668730
621 2908747553
622 2908756493
623 2922363915
624 2922392495
625 2922434112
626 2935637039
627 2935776895
628 2935783684
629 2935792847
630 2941513694
631 2941521657
632 2941529394
633 3005475177
634 8016609932
635 8016615007
636 8019562547
637 8019572622
638 8056691053

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13545

HTH_Crp_2

Crp-like helix-turn-helix domain

175

243

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ija-assembly1.cif.gz_B structure of s. aureus methicillin resistance factor mecr2 0.858 155 218
4i2o-assembly1.cif.gz_B the structure of fixk2 from bradyrhizobium japonicum 0.8461 35 228
5e44-assembly1.cif.gz_A-2 crystal structure of holo-fnr of a. fischeri 0.8318 23 226
7ff0-assembly1.cif.gz_A pseudomonas aeruginosa virulence factor regulator with camp ligand and auranofin 0.8247 24 218
4i2o-assembly1.cif.gz_B the structure of fixk2 from bradyrhizobium japonicum 0.823 35 228
ID Description Score Start End Superfamily
af_P9WMH5_174_242_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9425 154 225 1.10.10.10
af_P9WMH5_174_242_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9167 154 225 1.10.10.10
2zdbA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9055 155 226 1.10.10.10
3iwzA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8908 155 217 1.10.10.10
3mzhA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8901 155 226 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A528IJ54-F1-model_v4 Crp/Fnr family transcriptional regulator 0.9155 15 144
AF-A0A2U1UX82-F1-model_v4 Crp/Fnr family transcriptional regulator 0.915 15 134
AF-A0A4Q0SUI7-F1-model_v4 HTH crp-type domain-containing protein 0.882 136 243 GO:0003677
GO:0006355
AF-A0A3E1B469-F1-model_v4 Transcriptional regulator 0.8774 17 242 GO:0000160
GO:0003677
GO:0006355
AF-A0A2V9PUD1-F1-model_v4 Crp/Fnr family transcriptional regulator 0.8736 15 241 GO:0003677
GO:0003700
GO:0005829

Map