F404883

General Info

Members Datasets Scaffolds Average Seq Length
318 206 636 506

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2920760137|2920766293
Length 605
Sequence ATVCVRRGGATRAAAGAALRSRRYRQRCKNNVTHQSPPCLPDGSRLNAPLIDGTVALDDVTAEAVPSISPAPRCRRCSCRLPPFLRGGFVRRRGAMSVNTTMETQPMTISAEKEAMILRLYHVERWRCGTIATQLHCHHTTVFRVLKEAGLPRHRPVIRPAEIDQYLPFVQRTLETYPDLTASRLYGMVQERGYKGSASHFRHMIALHRPRKAAEAFLRLRTLPGEQGQVDWAHFGHIEIGKARRPLMAFVMVLSYSRDIYLRFFLDARMENFLRGHAGAFSAWNGLPRVLLYDNLKSAVLERQGDAIRFHPTLLAFAGHYRFEPRPVAVARGNEKGRVERAIRHIREAFFIARKFKDLDDLNAQAEQWCRNQAADRPCPEDRTMTVRQVFAQEQPMLLPLPANPYPIEEQIAAKVGKTPYVRFDLNDYSVPHTHVRRTLTVRADLAQVRIFDAATMIASHRRSYDRGQQIEDPRHLKALVAVKREARQHRGLNSLTHAVPAYQKLMIRAAERGANIGAITNAMLKLLDLYGATELQAAVEDALQAGASHSRSVRAVLERRRIARGAPPPVETRLPEHVRKKDTVVQPHKLDRYDQLTSAGNDDE

Samples

Sample ID Description Type Environment
1 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
20 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
29 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
30 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
31 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
32 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
56 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
57 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
58 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
59 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
60 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
61 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
62 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
63 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
64 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
65 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
66 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
67 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
68 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
69 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
71 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
72 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
73 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
74 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
75 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
76 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
78 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
79 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
80 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
81 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
82 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
83 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
84 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
85 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
86 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
87 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
88 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
89 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
90 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
91 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
94 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
98 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
99 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
100 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
101 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
102 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
103 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
104 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
105 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
109 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
110 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
113 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
114 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
115 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
116 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
117 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
118 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
122 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
126 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
127 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
130 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
131 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
132 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
133 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
134 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
137 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
140 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
141 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
142 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
145 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
146 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
147 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
148 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
149 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
150 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
151 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
152 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
155 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
158 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
159 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
160 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
161 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
162 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
163 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
164 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
165 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
166 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
167 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
168 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
169 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
170 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
171 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
172 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
173 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
174 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
175 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
176 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
177 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
178 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
179 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
180 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
181 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
182 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
183 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
184 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
185 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
189 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
190 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
191 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
192 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
193 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
194 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
195 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
196 2508501050 Microvirga lupini Lut6 Isolate Nodule
197 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
198 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
199 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
200 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
201 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
202 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
203 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
204 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
205 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
206 8004312739 Mesorhizobium sp. M7A.F.Ca.MR.362.00.0.0 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.77
Metatranscriptomes 0.31
Isolates 6.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.94
Nodule 1.89
Rhizoplane 4.4
Rhizosphere 82.7
Stem 0
Stem Tuber 0
Unclassified 3.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065714_10082937 3300005288 Bacteria 2278
2 Ga0070658_10046341 3300005327 Bacteria 3519
3 Ga0070682_100020477 3300005337 Bacteria 3891
4 Ga0070687_100021013 3300005343 Bacteria 3061
5 Ga0070671_100048678 3300005355 Bacteria 3526
6 Ga0070667_100048208 3300005367 Unclassified 3585
7 Ga0070708_100052987 3300005445 Bacteria 3599
8 Ga0070663_100029693 3300005455 Bacteria 3738
9 Ga0070663_100031564 3300005455 Bacteria 3641
10 Ga0070678_100043653 3300005456 Bacteria 3195
11 Ga0070678_100075295 3300005456 Bacteria 2539
12 Ga0070706_100057416 3300005467 Bacteria 3592
13 Ga0070679_100070857 3300005530 Bacteria 3477
14 Ga0070672_100048152 3300005543 Bacteria 3311
15 Ga0068855_100082034 3300005563 Bacteria 3737
16 Ga0068855_100111275 3300005563 Bacteria 3144
17 Ga0068857_100045143 3300005577 Bacteria 3909
18 Ga0068852_100060001 3300005616 Bacteria 3301
19 Ga0068851_10014589 3300005834 Bacteria 3732
20 Ga0081539_10030044 3300005985 Bacteria 3382
21 Ga0070717_10056137 3300006028 Bacteria 3252
22 Ga0070715_10026747 3300006163 Bacteria 2298
23 Ga0105251_10017062 3300009011 Bacteria 3901
24 Ga0105240_10137000 3300009093 Bacteria 2931
25 Ga0105243_10046958 3300009148 Bacteria 3398
26 Ga0105242_10065445 3300009176 Bacteria 2999
27 Ga0105237_10088799 3300009545 Bacteria 3080
28 Ga0105237_10108883 3300009545 Bacteria 2762
29 Ga0157369_10206500 3300013105 Bacteria 2060
30 Ga0157374_10060656 3300013296 Bacteria 3540
31 Ga0157378_10099267 3300013297 Bacteria 2656
32 Ga0163162_10095746 3300013306 Bacteria 3056
33 Ga0183362_10002 3300015683 Bacteria 1432711
34 Ga0163161_10027691 3300017792 Bacteria 4021
35 Ga0213871_10006413 3300021441 Bacteria 2486
36 Ga0207713_1015045 3300025735 Bacteria 3987
37 Ga0207647_10033708 3300025904 Bacteria 3276
38 Ga0207685_10027407 3300025905 Bacteria 1993
39 Ga0207684_10049464 3300025910 Bacteria 3566
40 Ga0207654_10027929 3300025911 Bacteria 3072
41 Ga0207695_10009764 3300025913 Bacteria 11807
42 Ga0207671_10002844 3300025914 Bacteria 17982
43 Ga0207671_10036562 3300025914 Bacteria 3642
44 Ga0207671_10055506 3300025914 Bacteria 2934
45 Ga0207662_10019276 3300025918 Bacteria 3879
46 Ga0207657_10031485 3300025919 Bacteria 4804
47 Ga0207652_10076273 3300025921 Bacteria 2923
48 Ga0207694_10012846 3300025924 Bacteria 6306
49 Ga0207644_10057048 3300025931 Bacteria 2819
50 Ga0207690_10028626 3300025932 Bacteria 3532
51 Ga0207690_10065464 3300025932 Bacteria 2486
52 Ga0207669_10021603 3300025937 Bacteria 3401
53 Ga0207704_10024366 3300025938 Bacteria 3281
54 Ga0207658_10051148 3300025986 Unclassified 3043
55 Ga0207639_10003696 3300026041 Bacteria 10288
56 Ga0207678_10036412 3300026067 Bacteria 4283
57 Ga0207678_10049536 3300026067 Bacteria 3630
58 Ga0207648_10093558 3300026089 Bacteria 2628
59 Ga0207674_10092730 3300026116 Bacteria 3009
60 Ga0207683_10059395 3300026121 Bacteria 3359
61 Ga0207698_10010654 3300026142 Bacteria 5925
62 Ga0207698_10100742 3300026142 Bacteria 2394
63 Ga0268266_10081972 3300028379 Bacteria 2813
64 Ga0265318_10022582 3300028577 Bacteria 2514
65 Ga0307517_10087426 3300028786 Unclassified 2589
66 Ga0307515_10089799 3300028794 Bacteria 3862
67 Ga0307515_10127855 3300028794 Bacteria 2823
68 Ga0265327_10024138 3300031251 Bacteria 3580
69 Ga0265316_10032820 3300031344 Bacteria 4235
70 Ga0265316_10044674 3300031344 Bacteria 3521
71 Ga0307509_10067806 3300031507 Bacteria 3735
72 Ga0316575_10011297 3300031665 Bacteria 3302
73 Ga0316575_10014136 3300031665 Bacteria 2993
74 Ga0316575_10016110 3300031665 Bacteria 2825
75 Ga0316579_10003327 3300031691 Bacteria 6244
76 Ga0316579_10013651 3300031691 Bacteria 3497
77 Ga0316579_10018981 3300031691 Bacteria 3033
78 Ga0316579_10031751 3300031691 Bacteria 2419
79 Ga0316576_10033443 3300031727 Bacteria 3660
80 Ga0316576_10036386 3300031727 Bacteria 3519
81 Ga0316576_10052884 3300031727 Bacteria 2958
82 Ga0316576_10160937 3300031727 Bacteria 1693
83 Ga0316576_10161229 3300031727 Unclassified 1692
84 Ga0316578_10021448 3300031728 Bacteria 3585
85 Ga0316578_10023138 3300031728 Bacteria 3475
86 Ga0316577_10021783 3300031733 Bacteria 3556
87 Ga0316577_10028291 3300031733 Bacteria 3126
88 Ga0316577_10032626 3300031733 Unclassified 2909
89 Ga0307407_10019769 3300031903 Bacteria 3436
90 Ga0316583_10010093 3300032133 Bacteria 3401
91 Ga0316583_10035577 3300032133 Bacteria 1767
92 Ga0316585_10009508 3300032137 Bacteria 2839
93 Ga0316585_10014637 3300032137 Bacteria 2347
94 Ga0316593_10004631 3300032168 Bacteria 3548
95 Ga0373958_0000584 3300034819 Bacteria 4524
96 Ga0373938_0000924 3300034957 Bacteria 4699
97 Ga0373928_0002696 3300035084 Bacteria 3433
98 Ga0373934_0010971 3300035086 Bacteria 3407
99 Ga0373949_0002671 3300035090 Bacteria 4479
100 Ga0373951_0003448 3300035091 Bacteria 3834
101 Ga0373923_0008642 3300035111 Bacteria 3644
102 Ga0373932_0002711 3300035112 Bacteria 4409
103 Ga0373939_0002353 3300035114 Bacteria 4471
104 Ga0373941_0001873 3300035115 Bacteria 4548
105 Ga0373953_0006497 3300035117 Bacteria 3855
106 Ga0373954_0008804 3300035118 Bacteria 4440
107 Ga0373956_0007635 3300035119 Bacteria 4359
108 Ga0373956_0011941 3300035119 Bacteria 3590
109 Ga0373957_0007311 3300035120 Bacteria 3531
110 Ga0373960_0001192 3300035121 Bacteria 5682
111 Ga0373955_0023141 3300035172 Bacteria 3161
112 Ga0373942_0001940 3300035207 Bacteria 5177
113 Ga0373961_0002551 3300035241 Bacteria 4692
114 Ga0373962_0002122 3300035242 Bacteria 4732
115 Ga0316574_0029574 3300035398 Bacteria 3310
116 Ga0373931_0010361 3300035691 Bacteria 4479
117 Ga0373933_0024828 3300035724 Bacteria 3433
118 Ga0373937_0062496 3300036401 Bacteria 3423
119 Ga0373937_0066123 3300036401 Bacteria 3328
120 Ga0316582_0023033 3300036647 Bacteria 3706
121 Ga0316582_0024936 3300036647 Bacteria 3584
122 Ga0316582_0034306 3300036647 Bacteria 3124
123 Ga0316582_0037226 3300036647 Bacteria 3015
124 Ga0316582_0044892 3300036647 Bacteria 2780
125 Ga0316582_0112580 3300036647 Bacteria 1813
126 Ga0316584_0028541 3300036712 Bacteria 4116
127 Ga0316584_0035309 3300036712 Bacteria 3709
128 Ga0316584_0051903 3300036712 Bacteria 3067
129 Ga0316584_0067124 3300036712 Bacteria 2688
130 Ga0395900_0027346 3300037418 Bacteria 5841
131 Ga0395905_0125909 3300037471 Bacteria 2409
132 Ga0316581_0006264 3300037588 Bacteria 3140
133 Ga0400490_05197 3300038726 Bacteria 3641
134 Ga0400491_09224 3300038727 Bacteria 4010
135 Ga0400485_16326 3300038735 Unclassified 2002
136 Ga0400488_07062 3300038741 Bacteria 3614
137 Ga0400488_48402 3300038741 Unclassified 2773
138 Ga0400483_071851 3300039062 Bacteria 8395
139 Ga0400483_140398 3300039062 Unclassified 2397
140 Ga0400483_201661 3300039062 Bacteria 3300
141 Ga0400483_241532 3300039062 Unclassified 2829
142 Ga0400487_25810 3300039110 Unclassified 2887
143 Ga0436360_1309522 3300039438 Bacteria 4446
144 Ga0436361_0817575 3300039447 Bacteria 4007
145 Ga0436361_1090915 3300039447 Bacteria 3959
146 Ga0439465_0006441 3300041413 Bacteria 3730
147 Ga0466966_0031342 3300044684 Bacteria 3448
148 Ga0466959_0040927 3300045049 Bacteria 3423
149 Ga0495592_0016471 3300046454 Bacteria 5609
150 Ga0495592_0033872 3300046454 Bacteria 3852
151 Ga0495603_0020767 3300046455 Bacteria 3976
152 Ga0495629_0000973 3300046459 Bacteria 23032
153 Ga0495629_0029741 3300046459 Bacteria 3873
154 Ga0495629_0095988 3300046459 Bacteria 2068
155 Ga0495629_0119560 3300046459 Bacteria 1836
156 Ga0495653_0030641 3300046463 Bacteria 4282
157 Ga0495653_0060267 3300046463 Bacteria 2876
158 Ga0495650_0012160 3300046471 Bacteria 4648
159 Ga0495580_0018498 3300046472 Bacteria 5187
160 Ga0495580_0063274 3300046472 Bacteria 2595
161 Ga0495605_0020554 3300046474 Bacteria 3508
162 Ga0495664_0025668 3300046477 Bacteria 3431
163 Ga0495664_0040793 3300046477 Bacteria 2745
164 Ga0495664_0043649 3300046477 Bacteria 2657
165 Ga0495596_0011778 3300046500 Bacteria 3756
166 Ga0495596_0017323 3300046500 Bacteria 2985
167 Ga0495583_0017905 3300046506 Bacteria 3747
168 Ga0495606_0030018 3300046507 Bacteria 3806
169 Ga0495606_0043375 3300046507 Bacteria 3000
170 Ga0495608_0028706 3300046511 Bacteria 3780
171 Ga0495608_0038688 3300046511 Bacteria 3202
172 Ga0495608_0064492 3300046511 Bacteria 2401
173 Ga0495616_0032258 3300046513 Bacteria 2738
174 Ga0495620_0016926 3300046515 Bacteria 3645
175 Ga0495620_0018243 3300046515 Bacteria 3477
176 Ga0495628_0040169 3300046516 Bacteria 3739
177 Ga0495628_0041961 3300046516 Plasmid 3650
178 Ga0495628_0058425 3300046516 Bacteria 3031
179 Ga0495630_0002707 3300046517 Bacteria 12296
180 Ga0495632_0023564 3300046519 Bacteria 3286
181 Ga0495663_0009447 3300046525 Bacteria 2705
182 Ga0495642_0010400 3300046528 Bacteria 3564
183 Ga0495652_0096235 3300046529 Bacteria 2412
184 Ga0495665_0000350 3300046531 Bacteria 23288
185 Ga0495665_0015387 3300046531 Bacteria 4120
186 Ga0495665_0016191 3300046531 Bacteria 4018
187 Ga0495640_0034687 3300046533 Bacteria 3574
188 Ga0495640_0064923 3300046533 Bacteria 2466
189 Ga0495586_0022287 3300046535 Bacteria 3379
190 Ga0495586_0058593 3300046535 Bacteria 2091
191 Ga0495587_0020518 3300046536 Bacteria 4078
192 Ga0495587_0029217 3300046536 Bacteria 3348
193 Ga0495598_0005741 3300046537 Bacteria 2770
194 Ga0495598_0007926 3300046537 Bacteria 2457
195 Ga0495597_0004861 3300046542 Bacteria 7240
196 Ga0495597_0018500 3300046542 Bacteria 3270
197 Ga0495645_0139313 3300046543 Bacteria 1694
198 Ga0495667_0029916 3300046559 Bacteria 3662
199 Ga0495656_0010916 3300046615 Bacteria 3319
200 Ga0495656_0038910 3300046615 Bacteria 1972
201 Ga0495668_0029891 3300046616 Bacteria 3078
202 Ga0495634_0067487 3300046642 Bacteria 2366
203 Ga0495635_0006334 3300046663 Bacteria 8251
204 Ga0495635_0027400 3300046663 Bacteria 3964
205 Ga0495635_0028239 3300046663 Bacteria 3899
206 Ga0495635_0047643 3300046663 Bacteria 2955
207 Ga0495588_0019941 3300046674 Bacteria 3290
208 Ga0495588_0067366 3300046674 Bacteria 1858
209 Ga0495657_0034735 3300046675 Bacteria 3499
210 Ga0495657_0040557 3300046675 Bacteria 3192
211 Ga0495599_0026024 3300046678 Bacteria 3665
212 Ga0495599_0028733 3300046678 Bacteria 3484
213 Ga0495623_0024239 3300046679 Bacteria 3912
214 Ga0495623_0039701 3300046679 Bacteria 3007
215 Ga0495646_0022550 3300046680 Bacteria 3970
216 Ga0495646_0033247 3300046680 Bacteria 3207
217 Ga0495646_0035621 3300046680 Bacteria 3086
218 Ga0495658_0063342 3300046683 Bacteria 2127
219 Ga0495669_0010541 3300046684 Bacteria 3908
220 Ga0495669_0011469 3300046684 Bacteria 3763
221 Ga0495624_0004000 3300046690 Bacteria 10851
222 Ga0495624_0034406 3300046690 Bacteria 3277
223 Ga0495670_0014575 3300046691 Bacteria 3865
224 Ga0495671_0018254 3300046692 Bacteria 3724
225 Ga0495649_0022066 3300046694 Bacteria 3565
226 Ga0495649_0022374 3300046694 Bacteria 3537
227 Ga0495589_0026204 3300046794 Bacteria 2955
228 Ga0495600_0030192 3300046809 Bacteria 3510
229 Ga0495600_0032868 3300046809 Bacteria 3366
230 Ga0495660_0013919 3300046810 Bacteria 4663
231 Ga0495660_0018363 3300046810 Bacteria 4021
232 Ga0495660_0035979 3300046810 Bacteria 2763
233 Ga0495581_0031863 3300047315 Bacteria 3054
234 Ga0495604_0023238 3300047317 Bacteria 4946
235 Ga0495604_0043047 3300047317 Bacteria 3536
236 Ga0495604_0043155 3300047317 Bacteria 3531
237 Ga0495604_0122469 3300047317 Bacteria 1881
238 Ga0495636_0003623 3300047318 Bacteria 5993
239 Ga0495674_0052738 3300047319 Bacteria 3577
240 Ga0495674_0052850 3300047319 Bacteria 3573
241 Ga0495674_0058589 3300047319 Bacteria 3366
242 Ga0495674_0059627 3300047319 Bacteria 3332
243 Ga0495674_0082817 3300047319 Bacteria 2751
244 Ga0495672_0028168 3300047320 Bacteria 3559
245 Ga0495680_0000641 3300047322 Bacteria 39205
246 Ga0495680_0039572 3300047322 Bacteria 3759
247 Ga0495683_0015208 3300047323 Bacteria 4006
248 Ga0495675_0025748 3300047444 Bacteria 3748
249 Ga0495675_0030266 3300047444 Bacteria 3454
250 Ga0495675_0052354 3300047444 Bacteria 2592
251 Ga0495679_007429 3300047446 Bacteria 4569
252 Ga0495673_0016737 3300047469 Bacteria 3741
253 Ga0495673_0036355 3300047469 Bacteria 2260
254 Ga0495684_0037506 3300047471 Bacteria 3717
255 Ga0495593_0000181 3300047673 Bacteria 32756
256 Ga0495593_0023736 3300047673 Bacteria 3405
257 Ga0495602_0002870 3300048088 Bacteria 17644
258 Ga0495602_0053244 3300048088 Bacteria 3586
259 Ga0495602_0053614 3300048088 Bacteria 3569
260 Ga0495602_0067270 3300048088 Bacteria 3083
261 Ga0495614_0012417 3300048089 Bacteria 3737
262 Ga0496100_0027552 3300048903 Bacteria 3495
263 Ga0496100_0046152 3300048903 Bacteria 2799
264 Ga0496101_0045171 3300048904 Bacteria 3154
265 Ga0496102_0043964 3300048905 Bacteria 4051
266 Ga0496102_0057825 3300048905 Bacteria 3542
267 Ga0496104_0099420 3300048907 Bacteria 2785
268 Ga0496105_0061396 3300048908 Bacteria 3101
269 Ga0496109_0161409 3300048912 Bacteria 2100
270 Ga0496110_0021257 3300048913 Bacteria 5491
271 Ga0496110_0055708 3300048913 Bacteria 3479
272 Ga0496111_0088325 3300048914 Bacteria 2270
273 Ga0496113_0034100 3300048916 Bacteria 3711
274 Ga0496114_0057908 3300048917 Bacteria 3235
275 Ga0496114_0094846 3300048917 Bacteria 2538
276 Ga0496121_0053776 3300048924 Bacteria 3370
277 Ga0496121_0074410 3300048924 Bacteria 2717
278 Ga0496122_0036321 3300048925 Bacteria 3987
279 Ga0496123_0036905 3300048926 Bacteria 3457
280 Ga0496126_0047334 3300048929 Bacteria 3937
281 Ga0495678_011682 3300049459 Bacteria 4193
282 Ga0495678_011864 3300049459 Bacteria 4155
283 Ga0495682_0001318 3300049460 Bacteria 13797
284 Ga0501034_0002391 3300049571 Bacteria 22752
285 Ga0501034_0075613 3300049571 Bacteria 3374
286 Ga0501083_0046653 3300049744 Bacteria 2928
287 Ga0501044_0070941 3300049823 Bacteria 3543
288 Ga0495601_0026915 3300053077 Bacteria 3554
289 Ga0495612_0013778 3300053078 Bacteria 3257
290 Ga0495595_0014810 3300053084 Bacteria 3315
291 Ga0495619_0030229 3300053085 Bacteria 3505
292 Ga0495619_0034037 3300053085 Bacteria 3311
293 Ga0495619_0037220 3300053085 Bacteria 3169
294 Ga0500651_0019991 3300053093 Unclassified 4167
295 Ga0500627_0021349 3300053158 Bacteria 2612
296 Ga0500645_009191 3300053730 Bacteria 3331
297 2920766293 2920760137 Bacteria 7427611
298 2508726926 2508501050 Bacteria 9633614
299 2512344638 2512047030 Bacteria 9031815
300 2513558515 2513237082 Bacteria 8640282
301 2516025064 2515154189 Bacteria 9629850
302 2792751059 2791355123 Bacteria 8049106
303 2792751308 2791355123 Bacteria 8049106
304 2792751338 2791355123 Bacteria 8049106
305 2792751457 2791355123 Bacteria 8049106
306 2792751479 2791355123 Bacteria 8049106
307 2792751556 2791355123 Bacteria 8049106
308 2792751630 2791355123 Bacteria 8049106
309 2842363653 2842357229 Bacteria 6485165
310 2882632923 2882632389 Bacteria 8154593
311 2924789421 2924784321 Bacteria 7416538
312 2990706487 2990703756 Bacteria 7715990
313 2990706557 2990703756 Bacteria 7715990
314 2990710453 2990703756 Bacteria 7715990
315 3004340580 3004334049 Bacteria 8449246
316 3004341309 3004334049 Bacteria 8449246
317 3004342118 3004334049 Bacteria 8449246
318 8004317253 8004312739 Bacteria 7444653
319 Ga0065714_10082937
320 Ga0070658_10046341
321 Ga0070682_100020477
322 Ga0070687_100021013
323 Ga0070671_100048678
324 Ga0070667_100048208
325 Ga0070708_100052987
326 Ga0070663_100029693
327 Ga0070663_100031564
328 Ga0070678_100043653
329 Ga0070678_100075295
330 Ga0070706_100057416
331 Ga0070679_100070857
332 Ga0070672_100048152
333 Ga0068855_100082034
334 Ga0068855_100111275
335 Ga0068857_100045143
336 Ga0068852_100060001
337 Ga0068851_10014589
338 Ga0081539_10030044
339 Ga0070717_10056137
340 Ga0070715_10026747
341 Ga0105251_10017062
342 Ga0105240_10137000
343 Ga0105243_10046958
344 Ga0105242_10065445
345 Ga0105237_10088799
346 Ga0105237_10108883
347 Ga0157369_10206500
348 Ga0157374_10060656
349 Ga0157378_10099267
350 Ga0163162_10095746
351 Ga0183362_10002
352 Ga0163161_10027691
353 Ga0213871_10006413
354 Ga0207713_1015045
355 Ga0207647_10033708
356 Ga0207685_10027407
357 Ga0207684_10049464
358 Ga0207654_10027929
359 Ga0207695_10009764
360 Ga0207671_10002844
361 Ga0207671_10036562
362 Ga0207671_10055506
363 Ga0207662_10019276
364 Ga0207657_10031485
365 Ga0207652_10076273
366 Ga0207694_10012846
367 Ga0207644_10057048
368 Ga0207690_10028626
369 Ga0207690_10065464
370 Ga0207669_10021603
371 Ga0207704_10024366
372 Ga0207658_10051148
373 Ga0207639_10003696
374 Ga0207678_10036412
375 Ga0207678_10049536
376 Ga0207648_10093558
377 Ga0207674_10092730
378 Ga0207683_10059395
379 Ga0207698_10010654
380 Ga0207698_10100742
381 Ga0268266_10081972
382 Ga0265318_10022582
383 Ga0307517_10087426
384 Ga0307515_10089799
385 Ga0307515_10127855
386 Ga0265327_10024138
387 Ga0265316_10032820
388 Ga0265316_10044674
389 Ga0307509_10067806
390 Ga0316575_10011297
391 Ga0316575_10014136
392 Ga0316575_10016110
393 Ga0316579_10003327
394 Ga0316579_10013651
395 Ga0316579_10018981
396 Ga0316579_10031751
397 Ga0316576_10033443
398 Ga0316576_10036386
399 Ga0316576_10052884
400 Ga0316576_10160937
401 Ga0316576_10161229
402 Ga0316578_10021448
403 Ga0316578_10023138
404 Ga0316577_10021783
405 Ga0316577_10028291
406 Ga0316577_10032626
407 Ga0307407_10019769
408 Ga0316583_10010093
409 Ga0316583_10035577
410 Ga0316585_10009508
411 Ga0316585_10014637
412 Ga0316593_10004631
413 Ga0373958_0000584
414 Ga0373938_0000924
415 Ga0373928_0002696
416 Ga0373934_0010971
417 Ga0373949_0002671
418 Ga0373951_0003448
419 Ga0373923_0008642
420 Ga0373932_0002711
421 Ga0373939_0002353
422 Ga0373941_0001873
423 Ga0373953_0006497
424 Ga0373954_0008804
425 Ga0373956_0007635
426 Ga0373956_0011941
427 Ga0373957_0007311
428 Ga0373960_0001192
429 Ga0373955_0023141
430 Ga0373942_0001940
431 Ga0373961_0002551
432 Ga0373962_0002122
433 Ga0316574_0029574
434 Ga0373931_0010361
435 Ga0373933_0024828
436 Ga0373937_0062496
437 Ga0373937_0066123
438 Ga0316582_0023033
439 Ga0316582_0024936
440 Ga0316582_0034306
441 Ga0316582_0037226
442 Ga0316582_0044892
443 Ga0316582_0112580
444 Ga0316584_0028541
445 Ga0316584_0035309
446 Ga0316584_0051903
447 Ga0316584_0067124
448 Ga0395900_0027346
449 Ga0395905_0125909
450 Ga0316581_0006264
451 Ga0400490_05197
452 Ga0400491_09224
453 Ga0400485_16326
454 Ga0400488_07062
455 Ga0400488_48402
456 Ga0400483_071851
457 Ga0400483_140398
458 Ga0400483_201661
459 Ga0400483_241532
460 Ga0400487_25810
461 Ga0436360_1309522
462 Ga0436361_0817575
463 Ga0436361_1090915
464 Ga0439465_0006441
465 Ga0466966_0031342
466 Ga0466959_0040927
467 Ga0495592_0016471
468 Ga0495592_0033872
469 Ga0495603_0020767
470 Ga0495629_0000973
471 Ga0495629_0029741
472 Ga0495629_0095988
473 Ga0495629_0119560
474 Ga0495653_0030641
475 Ga0495653_0060267
476 Ga0495650_0012160
477 Ga0495580_0018498
478 Ga0495580_0063274
479 Ga0495605_0020554
480 Ga0495664_0025668
481 Ga0495664_0040793
482 Ga0495664_0043649
483 Ga0495596_0011778
484 Ga0495596_0017323
485 Ga0495583_0017905
486 Ga0495606_0030018
487 Ga0495606_0043375
488 Ga0495608_0028706
489 Ga0495608_0038688
490 Ga0495608_0064492
491 Ga0495616_0032258
492 Ga0495620_0016926
493 Ga0495620_0018243
494 Ga0495628_0040169
495 Ga0495628_0041961
496 Ga0495628_0058425
497 Ga0495630_0002707
498 Ga0495632_0023564
499 Ga0495663_0009447
500 Ga0495642_0010400
501 Ga0495652_0096235
502 Ga0495665_0000350
503 Ga0495665_0015387
504 Ga0495665_0016191
505 Ga0495640_0034687
506 Ga0495640_0064923
507 Ga0495586_0022287
508 Ga0495586_0058593
509 Ga0495587_0020518
510 Ga0495587_0029217
511 Ga0495598_0005741
512 Ga0495598_0007926
513 Ga0495597_0004861
514 Ga0495597_0018500
515 Ga0495645_0139313
516 Ga0495667_0029916
517 Ga0495656_0010916
518 Ga0495656_0038910
519 Ga0495668_0029891
520 Ga0495634_0067487
521 Ga0495635_0006334
522 Ga0495635_0027400
523 Ga0495635_0028239
524 Ga0495635_0047643
525 Ga0495588_0019941
526 Ga0495588_0067366
527 Ga0495657_0034735
528 Ga0495657_0040557
529 Ga0495599_0026024
530 Ga0495599_0028733
531 Ga0495623_0024239
532 Ga0495623_0039701
533 Ga0495646_0022550
534 Ga0495646_0033247
535 Ga0495646_0035621
536 Ga0495658_0063342
537 Ga0495669_0010541
538 Ga0495669_0011469
539 Ga0495624_0004000
540 Ga0495624_0034406
541 Ga0495670_0014575
542 Ga0495671_0018254
543 Ga0495649_0022066
544 Ga0495649_0022374
545 Ga0495589_0026204
546 Ga0495600_0030192
547 Ga0495600_0032868
548 Ga0495660_0013919
549 Ga0495660_0018363
550 Ga0495660_0035979
551 Ga0495581_0031863
552 Ga0495604_0023238
553 Ga0495604_0043047
554 Ga0495604_0043155
555 Ga0495604_0122469
556 Ga0495636_0003623
557 Ga0495674_0052738
558 Ga0495674_0052850
559 Ga0495674_0058589
560 Ga0495674_0059627
561 Ga0495674_0082817
562 Ga0495672_0028168
563 Ga0495680_0000641
564 Ga0495680_0039572
565 Ga0495683_0015208
566 Ga0495675_0025748
567 Ga0495675_0030266
568 Ga0495675_0052354
569 Ga0495679_007429
570 Ga0495673_0016737
571 Ga0495673_0036355
572 Ga0495684_0037506
573 Ga0495593_0000181
574 Ga0495593_0023736
575 Ga0495602_0002870
576 Ga0495602_0053244
577 Ga0495602_0053614
578 Ga0495602_0067270
579 Ga0495614_0012417
580 Ga0496100_0027552
581 Ga0496100_0046152
582 Ga0496101_0045171
583 Ga0496102_0043964
584 Ga0496102_0057825
585 Ga0496104_0099420
586 Ga0496105_0061396
587 Ga0496109_0161409
588 Ga0496110_0021257
589 Ga0496110_0055708
590 Ga0496111_0088325
591 Ga0496113_0034100
592 Ga0496114_0057908
593 Ga0496114_0094846
594 Ga0496121_0053776
595 Ga0496121_0074410
596 Ga0496122_0036321
597 Ga0496123_0036905
598 Ga0496126_0047334
599 Ga0495678_011682
600 Ga0495678_011864
601 Ga0495682_0001318
602 Ga0501034_0002391
603 Ga0501034_0075613
604 Ga0501083_0046653
605 Ga0501044_0070941
606 Ga0495601_0026915
607 Ga0495612_0013778
608 Ga0495595_0014810
609 Ga0495619_0030229
610 Ga0495619_0034037
611 Ga0495619_0037220
612 Ga0500651_0019991
613 Ga0500627_0021349
614 Ga0500645_009191
615 2920766293
616 2508726926
617 2512344638
618 2513558515
619 2516025064
620 2792751059
621 2792751308
622 2792751338
623 2792751457
624 2792751479
625 2792751556
626 2792751630
627 2842363653
628 2882632923
629 2924789421
630 2990706487
631 2990706557
632 2990710453
633 3004340580
634 3004341309
635 3004342118
636 8004317253

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22483

Mu-transpos_C_2

Mu transposase, C-terminal domain

401

473

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bhy-assembly1.cif.gz_A dna-binding domain of deor in complex with the dna operator 0.9311 6 43
3vfz-assembly3.cif.gz_A crystal structure of -35 promoter binding domain of sigd of mycobacterium tuberculosis 0.9052 4 43
3vfz-assembly3.cif.gz_B crystal structure of -35 promoter binding domain of sigd of mycobacterium tuberculosis 0.902 3 43
5fgm-assembly1.cif.gz_A streptomyces coelicolor sigr region 4 0.8955 4 42
3hug-assembly1.cif.gz_C crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.8873 5 43
ID Description Score Start End Superfamily
af_P23484_80_166_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9429 7 43 1.10.10.10
4go1A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9296 6 43 1.10.10.10
3vfzA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9052 4 43 1.10.10.10
3vfzB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.902 3 43 1.10.10.10
af_Q50700_43_228_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8938 118 295 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A7K4DYH3-F1-model_v4 deleted 0.9579 141 440
AF-A0A7K4DYH3-F1-model_v4 deleted 0.9426 141 440
AF-T0VB68-F1-model_v4 Transposase for insertion sequence element IS21-like C-terminal domain-containing protein 0.9287 303 375
AF-A0A371YW71-F1-model_v4 IS21 family transposase 0.9242 297 369
AF-A0A839GG75-F1-model_v4 deleted 0.9211 302 368

Map