F404396

General Info

Members Datasets Scaffolds Average Seq Length
317 188 634 465

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2984576629|2984580569
Length 531
Sequence DPSAPSRPHPARAAATPADDARSRGARAPRAVRAGRTTRERAQGVHLRRALTLLLMTLVLPGSAQLVAGNKRVGRVALRIWLGLLALVVLVALVASVWNGLLLKLGANMALLGVIRLALVVLAVAWAALFVDAWRIAAPGALQRRQRVALVTLNGVLCFSVVGGLLFSAHAIEVGRGFVTSVFTGEEVTEPTAGRYNVLLIGADAGEGRIGLRADSMTVASIDQESGRTVLISLPRNMQRFPFREGSVMDEQFPDGFDCEGCYLNGVTTWATDHPDLFGLPADASHDQLFDAGMDATISAIEGVTDLDVNYWAMVDMRGFEDLVDAVGGVELNVRGRIPIGGVGAPISGYIEPGVQQLDGYRALWFARSRADSDDYSRMARQKCVMSAMLQQMDPTTVLTSFGQIADAGANMLETSIPPGEVDRFVDLALKARNEPISTVSIVPPAVNTADPDMDVVHQMIAAGIAGDTGEADEAPATEAPSTEAAAGSGSGSSGSGDGEAAAPDTVTGGSIGSRDEGYSANETSDLGSAC

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
89 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
90 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
94 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
99 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
100 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
101 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
102 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
151 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
152 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
155 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
156 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
157 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
158 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
162 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
163 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
164 2643221561 Nocardioides sp. Root151 Isolate Unclassified
165 2643221576 Nocardioides sp. Root614 Isolate Unclassified
166 2643221590 Nocardioides sp. Root682 Isolate Unclassified
167 2643221604 Nocardioides sp. Root190 Isolate Unclassified
168 2643221615 Nocardioides sp. Root224 Isolate Unclassified
169 2643221617 Nocardioides sp. Root79 Isolate Unclassified
170 2643221620 Nocardioides sp. Root240 Isolate Unclassified
171 2643221641 Nocardioides sp. Root122 Isolate Unclassified
172 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
173 2643221696 Nocardioides sp. Root140 Isolate Unclassified
174 2738541305 Nocardioides sp. CF167 Isolate Unclassified
175 2739367898 Nocardioides sp. CF479 Isolate Unclassified
176 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
177 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
178 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
179 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
180 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
181 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
182 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
183 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
184 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
185 2891562705 Microbispora tritici MT50 Isolate Unclassified
186 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
187 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
188 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.48
Metatranscriptomes 0.32
Isolates 8.2

Biome Distribution

Category Percentage (%)
Aerial Root 0.63
Bulb 0
Endosphere 10.09
Nodule 0.32
Rhizoplane 8.2
Rhizosphere 73.19
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1003699 3300000549 Bacteria 2031
2 JGI24735J21928_10001878 3300002067 Bacteria 7371
3 Ga0006562J51391_1031964 3300003578 Bacteria 2150
4 Ga0070658_10038851 3300005327 Bacteria 3839
5 Ga0070658_10050238 3300005327 Bacteria 3380
6 Ga0070683_100013200 3300005329 Bacteria 7196
7 Ga0070683_100103052 3300005329 Bacteria 2688
8 Ga0070680_100045040 3300005336 Bacteria 3586
9 Ga0070682_100021909 3300005337 Bacteria 3778
10 Ga0070682_100022320 3300005337 Bacteria 3748
11 Ga0070660_100009230 3300005339 Bacteria 6929
12 Ga0070660_100088615 3300005339 Bacteria 2437
13 Ga0070692_10011987 3300005345 Bacteria 3998
14 Ga0070692_10043654 3300005345 Bacteria 2306
15 Ga0070669_100138328 3300005353 Bacteria 1875
16 Ga0070674_100002886 3300005356 Bacteria 9512
17 Ga0070673_100073782 3300005364 Bacteria 2747
18 Ga0070659_100010836 3300005366 Bacteria 6721
19 Ga0070659_100103748 3300005366 Bacteria 2290
20 Ga0070667_100036829 3300005367 Bacteria 4102
21 Ga0070714_100000592 3300005435 Bacteria 25957
22 Ga0070700_100003021 3300005441 Bacteria 8627
23 Ga0070678_100078591 3300005456 Bacteria 2493
24 Ga0068867_100014567 3300005459 Bacteria 5572
25 Ga0070698_100008777 3300005471 Bacteria 10878
26 Ga0070679_100009609 3300005530 Bacteria 9149
27 Ga0070684_100015208 3300005535 Bacteria 6258
28 Ga0070672_100137633 3300005543 Bacteria 2012
29 Ga0070665_100001640 3300005548 Bacteria 25777
30 Ga0068855_100110230 3300005563 Bacteria 3160
31 Ga0070702_100011331 3300005615 Bacteria 4431
32 Ga0068852_100017181 3300005616 Bacteria 5670
33 Ga0068864_100028888 3300005618 Bacteria 4692
34 Ga0068866_10099420 3300005718 Bacteria 1602
35 Ga0068861_100028322 3300005719 Bacteria 4086
36 Ga0068870_10023179 3300005840 Bacteria 3060
37 Ga0068860_100006840 3300005843 Bacteria 11431
38 Ga0081538_10000186 3300005981 Bacteria 68308
39 Ga0081538_10010264 3300005981 Bacteria 7692
40 Ga0081539_10000208 3300005985 Bacteria 136941
41 Ga0075365_10007760 3300006038 Bacteria 6041
42 Ga0075365_10011639 3300006038 Bacteria 5183
43 Ga0075365_10029708 3300006038 Bacteria 3496
44 Ga0075368_10000233 3300006042 Bacteria 15683
45 Ga0075368_10007779 3300006042 Bacteria 3797
46 Ga0075368_10009545 3300006042 Bacteria 3488
47 Ga0075363_100015135 3300006048 Bacteria 3785
48 Ga0075363_100017834 3300006048 Bacteria 3528
49 Ga0075363_100018546 3300006048 Bacteria 3469
50 Ga0075364_10007406 3300006051 Bacteria 6514
51 Ga0075364_10088479 3300006051 Bacteria 2053
52 Ga0075367_10007790 3300006178 Bacteria 5509
53 Ga0075367_10013378 3300006178 Bacteria 4409
54 Ga0075367_10070839 3300006178 Bacteria 2096
55 Ga0075370_10014284 3300006353 Bacteria 4235
56 Ga0075370_10023761 3300006353 Bacteria 3379
57 Ga0068865_100020525 3300006881 Bacteria 4285
58 Ga0068865_100032121 3300006881 Bacteria 3505
59 Ga0068865_100045689 3300006881 Bacteria 3003
60 Ga0111539_10157301 3300009094 Bacteria 2659
61 Ga0105243_10003654 3300009148 Bacteria 12382
62 Ga0105243_10201175 3300009148 Bacteria 1747
63 Ga0105248_10007174 3300009177 Bacteria 12226
64 Ga0105249_10015012 3300009553 Bacteria 6851
65 Ga0105249_10018815 3300009553 Bacteria 6156
66 Ga0105249_10048898 3300009553 Bacteria 3856
67 Ga0105239_10004561 3300010375 Bacteria 16514
68 Ga0105239_10016003 3300010375 Bacteria 8302
69 Ga0105239_10238002 3300010375 Bacteria 2043
70 Ga0105246_10002872 3300011119 Bacteria 10424
71 Ga0105246_10051864 3300011119 Bacteria 2818
72 Ga0163162_10066072 3300013306 Bacteria 3665
73 Ga0157372_10001996 3300013307 Bacteria 22167
74 Ga0157372_10016494 3300013307 Bacteria 7927
75 Ga0157372_10060653 3300013307 Bacteria 4232
76 Ga0157375_10149854 3300013308 Bacteria 2467
77 Ga0157380_10010180 3300014326 Bacteria 6757
78 Ga0207688_10073964 3300025901 Bacteria 1937
79 Ga0207647_10004998 3300025904 Bacteria 9776
80 Ga0207647_10024904 3300025904 Bacteria 3940
81 Ga0207643_10002653 3300025908 Bacteria 9676
82 Ga0207643_10074929 3300025908 Bacteria 1952
83 Ga0207660_10038671 3300025917 Bacteria 3331
84 Ga0207657_10008035 3300025919 Bacteria 10761
85 Ga0207657_10022944 3300025919 Bacteria 5823
86 Ga0207657_10076494 3300025919 Bacteria 2823
87 Ga0207687_10099108 3300025927 Bacteria 2141
88 Ga0207664_10000969 3300025929 Bacteria 19338
89 Ga0207709_10107749 3300025935 Bacteria 1856
90 Ga0207669_10028669 3300025937 Bacteria 3066
91 Ga0207704_10077840 3300025938 Bacteria 2131
92 Ga0207691_10013505 3300025940 Bacteria 7811
93 Ga0207711_10124859 3300025941 Bacteria 2301
94 Ga0207661_10100077 3300025944 Bacteria 2432
95 Ga0207679_10093964 3300025945 Bacteria 2327
96 Ga0207667_10076057 3300025949 Bacteria 3485
97 Ga0207712_10034701 3300025961 Bacteria 3420
98 Ga0207712_10052917 3300025961 Bacteria 2846
99 Ga0207678_10098710 3300026067 Bacteria 2495
100 Ga0207708_10001377 3300026075 Bacteria 18288
101 Ga0207708_10014302 3300026075 Bacteria 5937
102 Ga0207648_10006282 3300026089 Bacteria 11824
103 Ga0207675_100002328 3300026118 Bacteria 18830
104 Ga0207683_10166905 3300026121 Bacteria 1992
105 Ga0207698_10011292 3300026142 Bacteria 5782
106 Ga0209813_10000855 3300027866 Bacteria 6869
107 Ga0268266_10003007 3300028379 Bacteria 17329
108 Ga0268265_10167579 3300028380 Bacteria 1874
109 Ga0268264_10000193 3300028381 Bacteria 126247
110 Ga0307405_10032758 3300031731 Bacteria 3075
111 Ga0307413_10138132 3300031824 Bacteria 1680
112 Ga0307412_10017007 3300031911 Bacteria 4346
113 Ga0307412_10149014 3300031911 Bacteria 1724
114 Ga0307409_100024819 3300031995 Bacteria 4190
115 Ga0307409_100074101 3300031995 Bacteria 2719
116 Ga0307416_100072540 3300032002 Bacteria 2866
117 Ga0307416_100098833 3300032002 Bacteria 2533
118 Ga0307415_100047711 3300032126 Bacteria 2884
119 Ga0395899_0010492 3300037312 Bacteria 7094
120 Ga0395900_0011875 3300037418 Bacteria 8907
121 Ga0395900_0029952 3300037418 Bacteria 5586
122 Ga0395900_0080864 3300037418 Bacteria 3339
123 Ga0395898_0039089 3300037466 Bacteria 4698
124 Ga0395898_0077583 3300037466 Bacteria 3207
125 Ga0395905_0007226 3300037471 Bacteria 11073
126 Ga0395901_0016939 3300038443 Bacteria 7429
127 Ga0395901_0018473 3300038443 Bacteria 7117
128 Ga0439431_0006189 3300041997 Bacteria 2642
129 Ga0466965_0019183 3300044683 Bacteria 3284
130 Ga0466965_0037444 3300044683 Bacteria 2381
131 Ga0466965_0041733 3300044683 Bacteria 2261
132 Ga0466966_0116259 3300044684 Bacteria 1646
133 Ga0466961_0036615 3300044693 Bacteria 3150
134 Ga0466961_0049027 3300044693 Bacteria 2699
135 Ga0466963_0019260 3300044694 Bacteria 4277
136 Ga0466963_0079879 3300044694 Bacteria 2213
137 Ga0466963_0102921 3300044694 Bacteria 1956
138 Ga0466964_0001812 3300044706 Bacteria 7435
139 Ga0466964_0024104 3300044706 Bacteria 2369
140 Ga0466964_0039519 3300044706 Bacteria 1902
141 Ga0466971_0018664 3300044719 Bacteria 3074
142 Ga0466971_0056067 3300044719 Bacteria 1777
143 Ga0466970_0036604 3300044765 Bacteria 2600
144 Ga0466970_0057003 3300044765 Bacteria 2088
145 Ga0466970_0101721 3300044765 Bacteria 1565
146 Ga0466957_0019030 3300044842 Bacteria 4037
147 Ga0466957_0027117 3300044842 Bacteria 3402
148 Ga0466957_0100762 3300044842 Bacteria 1820
149 Ga0466957_0144418 3300044842 Bacteria 1535
150 Ga0466960_0009961 3300044901 Bacteria 3935
151 Ga0466960_0022476 3300044901 Bacteria 2820
152 Ga0466960_0030416 3300044901 Bacteria 2484
153 Ga0466960_0083347 3300044901 Bacteria 1615
154 Ga0466958_0122011 3300045836 Bacteria 1632
155 Ga0466967_0048129 3300045976 Bacteria 3722
156 Ga0466967_0070167 3300045976 Bacteria 3134
157 Ga0466967_0073975 3300045976 Bacteria 3058
158 Ga0466967_0094437 3300045976 Bacteria 2723
159 Ga0466967_0110350 3300045976 Bacteria 2526
160 Ga0466967_0148397 3300045976 Bacteria 2189
161 Ga0466967_0168782 3300045976 Bacteria 2057
162 Ga0495603_0044563 3300046455 Bacteria 2647
163 Ga0495641_0054916 3300046461 Bacteria 1809
164 Ga0495635_0161014 3300046663 Bacteria 1527
165 Ga0496101_0047903 3300048904 Bacteria 3070
166 Ga0496102_0052952 3300048905 Bacteria 3699
167 Ga0496104_0013511 3300048907 Bacteria 7356
168 Ga0496104_0182499 3300048907 Bacteria 2009
169 Ga0496105_0014415 3300048908 Bacteria 6292
170 Ga0496106_0020793 3300048909 Bacteria 4871
171 Ga0496107_0151081 3300048910 Bacteria 1718
172 Ga0496107_0176335 3300048910 Bacteria 1587
173 Ga0496108_0043004 3300048911 Bacteria 3773
174 Ga0496108_0128130 3300048911 Bacteria 2180
175 Ga0496108_0175286 3300048911 Bacteria 1856
176 Ga0496109_0122392 3300048912 Bacteria 2424
177 Ga0496110_0014089 3300048913 Bacteria 6629
178 Ga0496110_0089439 3300048913 Bacteria 2752
179 Ga0496110_0190220 3300048913 Bacteria 1864
180 Ga0496111_0095267 3300048914 Bacteria 2184
181 Ga0496113_0107097 3300048916 Bacteria 2172
182 Ga0496114_0005388 3300048917 Bacteria 10004
183 Ga0496114_0009354 3300048917 Bacteria 7778
184 Ga0496114_0011315 3300048917 Bacteria 7126
185 Ga0496114_0018419 3300048917 Bacteria 5645
186 Ga0496114_0094240 3300048917 Bacteria 2547
187 Ga0496114_0118254 3300048917 Bacteria 2277
188 Ga0496114_0169202 3300048917 Bacteria 1904
189 Ga0496114_0171003 3300048917 Bacteria 1894
190 Ga0496115_0029106 3300048918 Bacteria 4336
191 Ga0501031_0008357 3300049568 Bacteria 6730
192 Ga0501031_0008804 3300049568 Bacteria 6564
193 Ga0501031_0058430 3300049568 Bacteria 2513
194 Ga0501032_0078002 3300049569 Bacteria 2205
195 Ga0501033_0082218 3300049570 Bacteria 2362
196 Ga0501034_0015726 3300049571 Bacteria 7770
197 Ga0501034_0042274 3300049571 Bacteria 4614
198 Ga0501034_0059864 3300049571 Bacteria 3826
199 Ga0501036_0001023 3300049572 Bacteria 21122
200 Ga0501036_0012942 3300049572 Bacteria 6928
201 Ga0501036_0024864 3300049572 Bacteria 5051
202 Ga0501036_0034381 3300049572 Bacteria 4287
203 Ga0501036_0080335 3300049572 Bacteria 2757
204 Ga0501037_0030600 3300049573 Bacteria 3977
205 Ga0501038_0002730 3300049574 Bacteria 16449
206 Ga0501038_0015392 3300049574 Bacteria 6954
207 Ga0501038_0015771 3300049574 Bacteria 6867
208 Ga0501038_0023519 3300049574 Bacteria 5507
209 Ga0501039_0003883 3300049575 Bacteria 11220
210 Ga0501039_0004912 3300049575 Bacteria 10128
211 Ga0501039_0010140 3300049575 Bacteria 7177
212 Ga0501039_0011566 3300049575 Bacteria 6720
213 Ga0501039_0087836 3300049575 Bacteria 2422
214 Ga0501040_0009406 3300049576 Bacteria 6370
215 Ga0501041_0019084 3300049577 Bacteria 4089
216 Ga0501042_0007440 3300049578 Bacteria 7173
217 Ga0501042_0018566 3300049578 Bacteria 4816
218 Ga0501042_0028279 3300049578 Bacteria 3948
219 Ga0501043_0066793 3300049579 Bacteria 2824
220 Ga0501043_0071590 3300049579 Bacteria 2723
221 Ga0501043_0107104 3300049579 Bacteria 2195
222 Ga0501046_0005840 3300049580 Bacteria 10977
223 Ga0501046_0053846 3300049580 Bacteria 3167
224 Ga0501046_0060192 3300049580 Bacteria 2972
225 Ga0501047_0120532 3300049581 Bacteria 2505
226 Ga0501048_0002020 3300049582 Bacteria 15407
227 Ga0501048_0002645 3300049582 Bacteria 13692
228 Ga0501048_0005261 3300049582 Bacteria 9856
229 Ga0501068_0004176 3300049584 Bacteria 7833
230 Ga0501069_0002467 3300049585 Bacteria 9435
231 Ga0501069_0019105 3300049585 Bacteria 3703
232 Ga0501069_0071363 3300049585 Bacteria 1946
233 Ga0501069_0086289 3300049585 Bacteria 1772
234 Ga0501070_0001075 3300049586 Bacteria 24476
235 Ga0501070_0009188 3300049586 Bacteria 8355
236 Ga0501070_0024140 3300049586 Bacteria 5098
237 Ga0501070_0050381 3300049586 Bacteria 3457
238 Ga0501070_0059884 3300049586 Bacteria 3156
239 Ga0501070_0078206 3300049586 Bacteria 2738
240 Ga0501070_0098432 3300049586 Bacteria 2419
241 Ga0501070_0185366 3300049586 Bacteria 1712
242 Ga0501071_0000348 3300049587 Bacteria 22523
243 Ga0501071_0001601 3300049587 Bacteria 13271
244 Ga0501071_0006946 3300049587 Bacteria 7387
245 Ga0501071_0119009 3300049587 Bacteria 1957
246 Ga0501071_0144973 3300049587 Bacteria 1770
247 Ga0501072_0055331 3300049588 Bacteria 3127
248 Ga0501073_0003948 3300049589 Bacteria 11124
249 Ga0501073_0017264 3300049589 Bacteria 5227
250 Ga0501073_0030142 3300049589 Bacteria 3875
251 Ga0501074_0054070 3300049590 Bacteria 2896
252 Ga0501075_0004409 3300049591 Bacteria 9525
253 Ga0501076_0002998 3300049592 Bacteria 11728
254 Ga0501077_0010923 3300049593 Bacteria 5659
255 Ga0501077_0039364 3300049593 Bacteria 3011
256 Ga0501079_0001457 3300049741 Bacteria 16727
257 Ga0501079_0009773 3300049741 Bacteria 7273
258 Ga0501079_0036940 3300049741 Bacteria 3763
259 Ga0501080_0034981 3300049742 Bacteria 4690
260 Ga0501080_0036462 3300049742 Bacteria 4590
261 Ga0501080_0054987 3300049742 Bacteria 3707
262 Ga0501081_0006272 3300049743 Bacteria 7710
263 Ga0501081_0009258 3300049743 Bacteria 6415
264 Ga0501083_0077015 3300049744 Bacteria 2213
265 Ga0501035_0057546 3300049822 Bacteria 3466
266 Ga0501044_0002750 3300049823 Bacteria 20015
267 Ga0501044_0178178 3300049823 Bacteria 2094
268 Ga0501045_0005556 3300049824 Bacteria 8723
269 nmdc:mga03n38_4212_c1 3300050490 Bacteria 4730
270 nmdc:mga00v17_7313_c1 3300050491 Bacteria 5886
271 nmdc:mga0yw44_103714_c1 3300050492 Bacteria 1814
272 nmdc:mga0yw44_11846_c1 3300050492 Bacteria 4524
273 nmdc:mga0yw44_16536_c1 3300050492 Bacteria 2398
274 nmdc:mga0yw44_5896_c1 3300050492 Bacteria 5857
275 nmdc:mga0yw44_9433_c1 3300050492 Bacteria 4935
276 nmdc:mga0yw44_97346_c1 3300050492 Bacteria 1869
277 nmdc:mga04h51_3076_c1 3300050495 Bacteria 4023
278 nmdc:mga07m45_1114_c1 3300050496 Bacteria 12026
279 nmdc:mga07m45_63231_c1 3300050496 Bacteria 2099
280 nmdc:mga06r32_221_c1 3300050510 Bacteria 46055
281 Ga0495619_0025651 3300053085 Bacteria 3787
282 Ga0500644_0000177 3300053088 Bacteria 40984
283 Ga0500556_0001134 3300053104 Bacteria 13090
284 Ga0500593_000353 3300053117 Bacteria 18588
285 Ga0500573_0036355 3300053140 Bacteria 2843
286 Ga0501084_0004527 3300054114 Bacteria 11369
287 Ga0501084_0032017 3300054114 Bacteria 4398
288 Ga0501082_0055838 3300060353 Bacteria 3401
289 Ga0501082_0084456 3300060353 Bacteria 2738
290 Ga0466962_0016658 3300061719 Bacteria 3545
291 Ga0530510_0082342 3300061734 Bacteria 2343
292 2984580569 2984576629 Bacteria 4248407
293 2643824070 2643221561 Bacteria 4984412
294 2643892543 2643221576 Bacteria 5214352
295 2643961595 2643221590 Bacteria 5214697
296 2644032463 2643221604 Bacteria 5014917
297 2644091852 2643221615 Bacteria 5487866
298 2644102649 2643221617 Bacteria 5139111
299 2644118311 2643221620 Bacteria 5134593
300 2644231528 2643221641 Bacteria 4490190
301 2644321655 2643221657 Bacteria 5490246
302 2644533377 2643221696 Bacteria 5431823
303 2738870645 2738541305 Bacteria 4910150
304 2740167390 2739367898 Bacteria 4367674
305 2774396536 2773857762 Bacteria 5971770
306 2809198202 2808606439 Bacteria 5952208
307 2812334071 2811994874 Bacteria 5367947
308 2812353127 2811994878 Bacteria 5992952
309 2855389163 2855386786 Bacteria 4752232
310 2856744826 2856741275 Bacteria 8096094
311 2857485632 2857481737 Bacteria 4761446
312 2891400283 2891395885 Bacteria 9251614
313 2891555442 2891554331 Bacteria 8812224
314 2891567020 2891562705 Bacteria 8039471
315 2891969245 2891968417 Bacteria 5821697
316 2990258261 2990256926 Bacteria 4252839
317 8054614366 8054609563 Bacteria 5170090
318 LJQas_1003699
319 JGI24735J21928_10001878
320 Ga0006562J51391_1031964
321 Ga0070658_10038851
322 Ga0070658_10050238
323 Ga0070683_100013200
324 Ga0070683_100103052
325 Ga0070680_100045040
326 Ga0070682_100021909
327 Ga0070682_100022320
328 Ga0070660_100009230
329 Ga0070660_100088615
330 Ga0070692_10011987
331 Ga0070692_10043654
332 Ga0070669_100138328
333 Ga0070674_100002886
334 Ga0070673_100073782
335 Ga0070659_100010836
336 Ga0070659_100103748
337 Ga0070667_100036829
338 Ga0070714_100000592
339 Ga0070700_100003021
340 Ga0070678_100078591
341 Ga0068867_100014567
342 Ga0070698_100008777
343 Ga0070679_100009609
344 Ga0070684_100015208
345 Ga0070672_100137633
346 Ga0070665_100001640
347 Ga0068855_100110230
348 Ga0070702_100011331
349 Ga0068852_100017181
350 Ga0068864_100028888
351 Ga0068866_10099420
352 Ga0068861_100028322
353 Ga0068870_10023179
354 Ga0068860_100006840
355 Ga0081538_10000186
356 Ga0081538_10010264
357 Ga0081539_10000208
358 Ga0075365_10007760
359 Ga0075365_10011639
360 Ga0075365_10029708
361 Ga0075368_10000233
362 Ga0075368_10007779
363 Ga0075368_10009545
364 Ga0075363_100015135
365 Ga0075363_100017834
366 Ga0075363_100018546
367 Ga0075364_10007406
368 Ga0075364_10088479
369 Ga0075367_10007790
370 Ga0075367_10013378
371 Ga0075367_10070839
372 Ga0075370_10014284
373 Ga0075370_10023761
374 Ga0068865_100020525
375 Ga0068865_100032121
376 Ga0068865_100045689
377 Ga0111539_10157301
378 Ga0105243_10003654
379 Ga0105243_10201175
380 Ga0105248_10007174
381 Ga0105249_10015012
382 Ga0105249_10018815
383 Ga0105249_10048898
384 Ga0105239_10004561
385 Ga0105239_10016003
386 Ga0105239_10238002
387 Ga0105246_10002872
388 Ga0105246_10051864
389 Ga0163162_10066072
390 Ga0157372_10001996
391 Ga0157372_10016494
392 Ga0157372_10060653
393 Ga0157375_10149854
394 Ga0157380_10010180
395 Ga0207688_10073964
396 Ga0207647_10004998
397 Ga0207647_10024904
398 Ga0207643_10002653
399 Ga0207643_10074929
400 Ga0207660_10038671
401 Ga0207657_10008035
402 Ga0207657_10022944
403 Ga0207657_10076494
404 Ga0207687_10099108
405 Ga0207664_10000969
406 Ga0207709_10107749
407 Ga0207669_10028669
408 Ga0207704_10077840
409 Ga0207691_10013505
410 Ga0207711_10124859
411 Ga0207661_10100077
412 Ga0207679_10093964
413 Ga0207667_10076057
414 Ga0207712_10034701
415 Ga0207712_10052917
416 Ga0207678_10098710
417 Ga0207708_10001377
418 Ga0207708_10014302
419 Ga0207648_10006282
420 Ga0207675_100002328
421 Ga0207683_10166905
422 Ga0207698_10011292
423 Ga0209813_10000855
424 Ga0268266_10003007
425 Ga0268265_10167579
426 Ga0268264_10000193
427 Ga0307405_10032758
428 Ga0307413_10138132
429 Ga0307412_10017007
430 Ga0307412_10149014
431 Ga0307409_100024819
432 Ga0307409_100074101
433 Ga0307416_100072540
434 Ga0307416_100098833
435 Ga0307415_100047711
436 Ga0395899_0010492
437 Ga0395900_0011875
438 Ga0395900_0029952
439 Ga0395900_0080864
440 Ga0395898_0039089
441 Ga0395898_0077583
442 Ga0395905_0007226
443 Ga0395901_0016939
444 Ga0395901_0018473
445 Ga0439431_0006189
446 Ga0466965_0019183
447 Ga0466965_0037444
448 Ga0466965_0041733
449 Ga0466966_0116259
450 Ga0466961_0036615
451 Ga0466961_0049027
452 Ga0466963_0019260
453 Ga0466963_0079879
454 Ga0466963_0102921
455 Ga0466964_0001812
456 Ga0466964_0024104
457 Ga0466964_0039519
458 Ga0466971_0018664
459 Ga0466971_0056067
460 Ga0466970_0036604
461 Ga0466970_0057003
462 Ga0466970_0101721
463 Ga0466957_0019030
464 Ga0466957_0027117
465 Ga0466957_0100762
466 Ga0466957_0144418
467 Ga0466960_0009961
468 Ga0466960_0022476
469 Ga0466960_0030416
470 Ga0466960_0083347
471 Ga0466958_0122011
472 Ga0466967_0048129
473 Ga0466967_0070167
474 Ga0466967_0073975
475 Ga0466967_0094437
476 Ga0466967_0110350
477 Ga0466967_0148397
478 Ga0466967_0168782
479 Ga0495603_0044563
480 Ga0495641_0054916
481 Ga0495635_0161014
482 Ga0496101_0047903
483 Ga0496102_0052952
484 Ga0496104_0013511
485 Ga0496104_0182499
486 Ga0496105_0014415
487 Ga0496106_0020793
488 Ga0496107_0151081
489 Ga0496107_0176335
490 Ga0496108_0043004
491 Ga0496108_0128130
492 Ga0496108_0175286
493 Ga0496109_0122392
494 Ga0496110_0014089
495 Ga0496110_0089439
496 Ga0496110_0190220
497 Ga0496111_0095267
498 Ga0496113_0107097
499 Ga0496114_0005388
500 Ga0496114_0009354
501 Ga0496114_0011315
502 Ga0496114_0018419
503 Ga0496114_0094240
504 Ga0496114_0118254
505 Ga0496114_0169202
506 Ga0496114_0171003
507 Ga0496115_0029106
508 Ga0501031_0008357
509 Ga0501031_0008804
510 Ga0501031_0058430
511 Ga0501032_0078002
512 Ga0501033_0082218
513 Ga0501034_0015726
514 Ga0501034_0042274
515 Ga0501034_0059864
516 Ga0501036_0001023
517 Ga0501036_0012942
518 Ga0501036_0024864
519 Ga0501036_0034381
520 Ga0501036_0080335
521 Ga0501037_0030600
522 Ga0501038_0002730
523 Ga0501038_0015392
524 Ga0501038_0015771
525 Ga0501038_0023519
526 Ga0501039_0003883
527 Ga0501039_0004912
528 Ga0501039_0010140
529 Ga0501039_0011566
530 Ga0501039_0087836
531 Ga0501040_0009406
532 Ga0501041_0019084
533 Ga0501042_0007440
534 Ga0501042_0018566
535 Ga0501042_0028279
536 Ga0501043_0066793
537 Ga0501043_0071590
538 Ga0501043_0107104
539 Ga0501046_0005840
540 Ga0501046_0053846
541 Ga0501046_0060192
542 Ga0501047_0120532
543 Ga0501048_0002020
544 Ga0501048_0002645
545 Ga0501048_0005261
546 Ga0501068_0004176
547 Ga0501069_0002467
548 Ga0501069_0019105
549 Ga0501069_0071363
550 Ga0501069_0086289
551 Ga0501070_0001075
552 Ga0501070_0009188
553 Ga0501070_0024140
554 Ga0501070_0050381
555 Ga0501070_0059884
556 Ga0501070_0078206
557 Ga0501070_0098432
558 Ga0501070_0185366
559 Ga0501071_0000348
560 Ga0501071_0001601
561 Ga0501071_0006946
562 Ga0501071_0119009
563 Ga0501071_0144973
564 Ga0501072_0055331
565 Ga0501073_0003948
566 Ga0501073_0017264
567 Ga0501073_0030142
568 Ga0501074_0054070
569 Ga0501075_0004409
570 Ga0501076_0002998
571 Ga0501077_0010923
572 Ga0501077_0039364
573 Ga0501079_0001457
574 Ga0501079_0009773
575 Ga0501079_0036940
576 Ga0501080_0034981
577 Ga0501080_0036462
578 Ga0501080_0054987
579 Ga0501081_0006272
580 Ga0501081_0009258
581 Ga0501083_0077015
582 Ga0501035_0057546
583 Ga0501044_0002750
584 Ga0501044_0178178
585 Ga0501045_0005556
586 nmdc:mga03n38_4212_c1
587 nmdc:mga00v17_7313_c1
588 nmdc:mga0yw44_103714_c1
589 nmdc:mga0yw44_11846_c1
590 nmdc:mga0yw44_16536_c1
591 nmdc:mga0yw44_5896_c1
592 nmdc:mga0yw44_9433_c1
593 nmdc:mga0yw44_97346_c1
594 nmdc:mga04h51_3076_c1
595 nmdc:mga07m45_1114_c1
596 nmdc:mga07m45_63231_c1
597 nmdc:mga06r32_221_c1
598 Ga0495619_0025651
599 Ga0500644_0000177
600 Ga0500556_0001134
601 Ga0500593_000353
602 Ga0500573_0036355
603 Ga0501084_0004527
604 Ga0501084_0032017
605 Ga0501082_0055838
606 Ga0501082_0084456
607 Ga0466962_0016658
608 Ga0530510_0082342
609 2984580569
610 2643824070
611 2643892543
612 2643961595
613 2644032463
614 2644091852
615 2644102649
616 2644118311
617 2644231528
618 2644321655
619 2644533377
620 2738870645
621 2740167390
622 2774396536
623 2809198202
624 2812334071
625 2812353127
626 2855389163
627 2856744826
628 2857485632
629 2891400283
630 2891555442
631 2891567020
632 2891969245
633 2990258261
634 8054614366

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03816

LytR_cpsA_psr

LytR_cpsA_psr family

213

395

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qfi-assembly1.cif.gz_A x-ray crystal structure of transcriptional regulator (ef0465) from enterococcus faecalis, northeast structural genomics consortium target efr190 0.8096 145 381
6uex-assembly1.cif.gz_A crystal structure of s. aureus lcpa in complex with octaprenyl-pyrophosphate-glcnac 0.7867 144 382
3nxh-assembly1.cif.gz_A crystal structure of the transcriptional regulator yvhj from bacillus subtilis. northeast structural genomics consortium target sr735. 0.7867 141 383
3okz-assembly1.cif.gz_A crystal structure of protein gbs0355 from streptococcus agalactiae, northeast structural genomics consortium target sar127 0.7761 145 382
6uf3-assembly1.cif.gz_A crystal structure of b. subtilis tagv 0.7753 141 383
ID Description Score Start End Superfamily
3qfiA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;LCP protein 0.8096 145 381 3.40.630.190
3tepA02 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;LCP protein 0.7894 139 381 3.40.630.190
3nxhA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;LCP protein 0.7823 142 383 3.40.630.190
af_Q2FVV8_42_307_3.40.630.190 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;LCP protein 0.7706 145 383 3.40.630.190
4obmA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;LCP protein 0.7669 139 379 3.40.630.190
ID Description Score Start End GO Terms
AF-A0A832GL26-F1-model_v4 LytR family transcriptional regulator 0.864 235 354
AF-A0A7V0J3B5-F1-model_v4 LytR family transcriptional regulator 0.8333 148 387
AF-A0A355BFX6-F1-model_v4 LytR family transcriptional regulator 0.8295 239 355
AF-A0A658JM95-F1-model_v4 deleted 0.8266 249 355
AF-A0A7X8BG82-F1-model_v4 LCP family protein 0.8247 137 373

Map