F404332

General Info

Members Datasets Scaffolds Average Seq Length
317 158 634 364

Family's Representative Sequence

Representative Sequence 3300049576|Ga0501040_0000546|Ga0501040_0000546_15288_16430
Length 380
Sequence MRSTLAAEPTERAAAAAPPRVNLLDLDQEGMASFVASLGEKPFRVVQLLKWIHQRRVFDFAAMTDLSKALRLRLAESAEVRAPQPIFDKESADGTRKWVLAVEGGNAIETVFIPETGRGTLCVSSQVGCALDCTFCSTAQQGFNRNLTTAEIIGQVLFASDALAHEGRDRRITNVVLMGMGEPLANFRNVVAATRLMVDQNAYGLSRRKVTLSTSGLVPNLYRLAEVSDISLAVSLHAPSDDVRDEIVPINRKYPLSELLAACRNYVARTPHHRITWEYVMLDGINDSDAQARALARLLEGIPSKINLIPFNPFPGTRYVCSPRPRIERFKEILIRAGYITTVRKTRGDDIDGACGQLVGQVHDRSKRRLRRENTDEARP

Samples

Sample ID Description Type Environment
1 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
88 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
89 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
90 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
91 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
92 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
93 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
100 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
101 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
102 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
103 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
104 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
105 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
106 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
107 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
108 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
109 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
110 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
111 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
112 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
113 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
114 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
115 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
116 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
117 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
118 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
119 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
120 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
121 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
122 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
123 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
124 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
125 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
130 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
133 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
134 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
155 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
156 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
157 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
158 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.8
Metatranscriptomes 8.2
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.21
Rhizosphere 81.7
Stem 0
Stem Tuber 0
Unclassified 1.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501040_0000546 3300049576 Bacteria 22767
2 Ga0065715_10019175 3300005293 Bacteria 2116
3 Ga0065715_10022021 3300005293 Bacteria 2618
4 Ga0065707_10099216 3300005295 Bacteria 3023
5 Ga0070690_100085268 3300005330 Bacteria 2072
6 Ga0068869_100123790 3300005334 Bacteria 1981
7 Ga0068868_100010444 3300005338 Bacteria 6722
8 Ga0070660_100047079 3300005339 Bacteria 3308
9 Ga0070691_10000294 3300005341 Bacteria 17412
10 Ga0070687_100012087 3300005343 Bacteria 3800
11 Ga0070675_100025331 3300005354 Bacteria 4756
12 Ga0070674_100005690 3300005356 Bacteria 7227
13 Ga0070673_100367770 3300005364 Unclassified 1280
14 Ga0070688_100016545 3300005365 Bacteria 4219
15 Ga0070688_100028912 3300005365 Bacteria 3314
16 Ga0070667_100016620 3300005367 Bacteria 6090
17 Ga0070714_100003779 3300005435 Bacteria 11354
18 Ga0070701_10111001 3300005438 Bacteria 1532
19 Ga0070705_100004380 3300005440 Bacteria 6876
20 Ga0070700_100254893 3300005441 Bacteria 1261
21 Ga0070694_100021073 3300005444 Bacteria 4161
22 Ga0070708_100018024 3300005445 Bacteria 5904
23 Ga0070708_100321494 3300005445 Bacteria 1458
24 Ga0070681_10223899 3300005458 Bacteria 1796
25 Ga0068867_100084989 3300005459 Bacteria 2392
26 Ga0070707_100094266 3300005468 Bacteria 2899
27 Ga0070698_100031169 3300005471 Bacteria 5528
28 Ga0070699_100000613 3300005518 Bacteria 33675
29 Ga0070679_100002755 3300005530 Bacteria 15989
30 Ga0070686_100000398 3300005544 Bacteria 27472
31 Ga0070665_100005113 3300005548 Bacteria 13603
32 Ga0070704_100064359 3300005549 Bacteria 2635
33 Ga0068854_100003653 3300005578 Bacteria 9628
34 Ga0068856_100011939 3300005614 Bacteria 8411
35 Ga0070702_100000788 3300005615 Bacteria 12059
36 Ga0068866_10133470 3300005718 Bacteria 1415
37 Ga0068861_100121243 3300005719 Bacteria 2110
38 Ga0068863_100158632 3300005841 Bacteria 2166
39 Ga0068858_100076257 3300005842 Bacteria 3113
40 Ga0081455_10015660 3300005937 Bacteria 7354
41 Ga0081455_10081322 3300005937 Bacteria 2653
42 Ga0070715_10010335 3300006163 Bacteria 3324
43 Ga0070715_10026231 3300006163 Bacteria 2316
44 Ga0097621_100013084 3300006237 Bacteria 6171
45 Ga0097621_100033891 3300006237 Bacteria 4071
46 Ga0097621_100034731 3300006237 Bacteria 4024
47 Ga0068871_100010644 3300006358 Bacteria 6723
48 Ga0068871_100014383 3300006358 Bacteria 5900
49 Ga0068871_100044009 3300006358 Bacteria 3588
50 Ga0075428_100256558 3300006844 Bacteria 1883
51 Ga0075431_100185240 3300006847 Bacteria 2135
52 Ga0075433_10046439 3300006852 Bacteria 3777
53 Ga0075434_100007156 3300006871 Bacteria 10315
54 Ga0075434_100012495 3300006871 Bacteria 8053
55 Ga0075434_100240880 3300006871 Bacteria 1829
56 Ga0075436_100004597 3300006914 Bacteria 9457
57 Ga0075436_100010894 3300006914 Bacteria 6240
58 Ga0075436_100094514 3300006914 Bacteria 2079
59 Ga0075435_100000346 3300007076 Bacteria 28639
60 Ga0075435_100000679 3300007076 Bacteria 21089
61 Ga0075435_100017671 3300007076 Bacteria 5405
62 Ga0075435_100061060 3300007076 Bacteria 3058
63 Ga0075435_100115317 3300007076 Bacteria 2237
64 Ga0105240_10304962 3300009093 Bacteria 1821
65 Ga0111539_10004361 3300009094 Bacteria 18532
66 Ga0111539_10011775 3300009094 Bacteria 10966
67 Ga0114129_10006811 3300009147 Bacteria 16229
68 Ga0114129_10017617 3300009147 Bacteria 10168
69 Ga0114129_10042962 3300009147 Bacteria 6361
70 Ga0114129_10053118 3300009147 Bacteria 5683
71 Ga0114129_10059465 3300009147 Bacteria 5343
72 Ga0114129_10092160 3300009147 Bacteria 4198
73 Ga0105243_10104405 3300009148 Bacteria 2359
74 Ga0105241_10125175 3300009174 Bacteria 2075
75 Ga0105242_10029452 3300009176 Bacteria 4379
76 Ga0105248_10027904 3300009177 Bacteria 6286
77 Ga0105248_10099627 3300009177 Bacteria 3275
78 Ga0105249_10334996 3300009553 Bacteria 1528
79 Ga0157374_10162550 3300013296 Bacteria 2175
80 Ga0157375_10031653 3300013308 Bacteria 5006
81 Ga0157375_10126631 3300013308 Bacteria 2669
82 Ga0163163_10433882 3300014325 Bacteria 1373
83 Ga0157380_10356311 3300014326 Bacteria 1371
84 Ga0157379_10012034 3300014968 Bacteria 7558
85 Ga0157379_10356212 3300014968 Bacteria 1340
86 Ga0157376_10006020 3300014969 Bacteria 8526
87 Ga0207680_10007834 3300025903 Bacteria 5221
88 Ga0207685_10018711 3300025905 Unclassified 2267
89 Ga0207645_10012128 3300025907 Bacteria 5856
90 Ga0207645_10111408 3300025907 Bacteria 1772
91 Ga0207705_10074935 3300025909 Bacteria 2457
92 Ga0207654_10037638 3300025911 Bacteria 2710
93 Ga0207707_10179688 3300025912 Bacteria 1848
94 Ga0207695_10249319 3300025913 Bacteria 1675
95 Ga0207695_10325868 3300025913 Bacteria 1425
96 Ga0207657_10017371 3300025919 Bacteria 6902
97 Ga0207646_10090478 3300025922 Bacteria 2739
98 Ga0207681_10007307 3300025923 Bacteria 6769
99 Ga0207681_10100455 3300025923 Bacteria 2085
100 Ga0207659_10144524 3300025926 Bacteria 1850
101 Ga0207687_10033355 3300025927 Bacteria 3492
102 Ga0207706_10112391 3300025933 Bacteria 2396
103 Ga0207709_10003321 3300025935 Bacteria 9636
104 Ga0207691_10078571 3300025940 Bacteria 2970
105 Ga0207691_10163449 3300025940 Bacteria 1952
106 Ga0207691_10191771 3300025940 Bacteria 1782
107 Ga0207711_10061169 3300025941 Bacteria 3247
108 Ga0207711_10122057 3300025941 Bacteria 2327
109 Ga0207667_10050737 3300025949 Bacteria 4377
110 Ga0207651_10112041 3300025960 Bacteria 2050
111 Ga0207651_10118817 3300025960 Bacteria 2000
112 Ga0207668_10009891 3300025972 Bacteria 5733
113 Ga0207640_10037083 3300025981 Bacteria 3065
114 Ga0207640_10065647 3300025981 Bacteria 2422
115 Ga0207658_10031879 3300025986 Bacteria 3747
116 Ga0207677_10169908 3300026023 Bacteria 1704
117 Ga0207648_10027273 3300026089 Bacteria 5073
118 Ga0207675_100000511 3300026118 Bacteria 37642
119 Ga0207675_100155191 3300026118 Bacteria 2181
120 Ga0207428_10009908 3300027907 Bacteria 8534
121 Ga0207428_10027420 3300027907 Bacteria 4741
122 Ga0268265_10017232 3300028380 Bacteria 4981
123 Ga0316579_10001196 3300031691 Bacteria 9294
124 Ga0316579_10001295 3300031691 Bacteria 9026
125 Ga0316579_10009649 3300031691 Bacteria 4064
126 Ga0316579_10049475 3300031691 Bacteria 1964
127 Ga0316576_10000186 3300031727 Bacteria 26057
128 Ga0316576_10020789 3300031727 Bacteria 4528
129 Ga0316576_10044031 3300031727 Bacteria 3223
130 Ga0316576_10046643 3300031727 Bacteria 3137
131 Ga0316576_10104701 3300031727 Bacteria 2117
132 Ga0316576_10237588 3300031727 Bacteria 1369
133 Ga0316578_10000961 3300031728 Bacteria 10958
134 Ga0316578_10003348 3300031728 Bacteria 7307
135 Ga0316578_10005011 3300031728 Bacteria 6353
136 Ga0316578_10010144 3300031728 Bacteria 4876
137 Ga0316578_10026347 3300031728 Bacteria 3278
138 Ga0316578_10029129 3300031728 Bacteria 3132
139 Ga0316578_10033284 3300031728 Bacteria 2952
140 Ga0316578_10035612 3300031728 Bacteria 2862
141 Ga0316578_10120591 3300031728 Bacteria 1576
142 Ga0316577_10000006 3300031733 Bacteria 43337
143 Ga0316577_10001477 3300031733 Bacteria 11135
144 Ga0316577_10006911 3300031733 Bacteria 6028
145 Ga0316577_10070523 3300031733 Bacteria 1950
146 Ga0316585_10000238 3300032137 Bacteria 11638
147 Ga0316585_10010634 3300032137 Bacteria 2702
148 Ga0316585_10029125 3300032137 Bacteria 1729
149 Ga0316580_10000036 3300032139 Bacteria 21301
150 Ga0316580_10002460 3300032139 Bacteria 5096
151 Ga0316580_10010830 3300032139 Bacteria 2763
152 Ga0316593_10000123 3300032168 Bacteria 10488
153 Ga0316593_10001307 3300032168 Bacteria 5428
154 Ga0316593_10002470 3300032168 Bacteria 4397
155 Ga0316593_10002493 3300032168 Bacteria 4385
156 Ga0316593_10003445 3300032168 Bacteria 3925
157 Ga0316593_10004696 3300032168 Bacteria 3532
158 Ga0316592_1001505 3300033524 Bacteria 3773
159 Ga0316592_1001684 3300033524 Bacteria 3650
160 Ga0316592_1006226 3300033524 Bacteria 2292
161 Ga0316592_1007179 3300033524 Bacteria 2170
162 Ga0316586_1006959 3300033527 Bacteria 1637
163 Ga0316588_1000251 3300033528 Bacteria 6494
164 Ga0316588_1002228 3300033528 Bacteria 3354
165 Ga0316588_1002564 3300033528 Bacteria 3174
166 Ga0316588_1013424 3300033528 Bacteria 1777
167 Ga0316588_1018304 3300033528 Bacteria 1568
168 Ga0316587_1000612 3300033529 Bacteria 3777
169 Ga0316596_1000343 3300033541 Bacteria 7598
170 Ga0316596_1000362 3300033541 Bacteria 7446
171 Ga0316596_1000512 3300033541 Bacteria 6617
172 Ga0316596_1001190 3300033541 Bacteria 5124
173 Ga0316596_1001650 3300033541 Bacteria 4591
174 Ga0316596_1001778 3300033541 Bacteria 4478
175 Ga0316596_1004295 3300033541 Bacteria 3188
176 Ga0316596_1006847 3300033541 Bacteria 2668
177 Ga0316596_1016539 3300033541 Bacteria 1849
178 Ga0373930_0000261 3300034816 Bacteria 6726
179 Ga0373950_0004477 3300034818 Bacteria 2048
180 Ga0373959_0011621 3300034820 Bacteria 1558
181 Ga0373928_0001472 3300035084 Bacteria 4583
182 Ga0373929_0010151 3300035085 Bacteria 1756
183 Ga0373949_0030185 3300035090 Unclassified 1287
184 Ga0373939_0001921 3300035114 Bacteria 4966
185 Ga0373941_0000071 3300035115 Bacteria 16051
186 Ga0373960_0000070 3300035121 Bacteria 14646
187 Ga0373943_0056406 3300035170 Bacteria 1949
188 Ga0373942_0000904 3300035207 Bacteria 8124
189 Ga0373961_0001878 3300035241 Bacteria 5724
190 Ga0373962_0000419 3300035242 Bacteria 9298
191 Ga0316574_0000233 3300035398 Bacteria 20041
192 Ga0316574_0015418 3300035398 Bacteria 4434
193 Ga0316574_0032673 3300035398 Bacteria 3163
194 Ga0373931_0000441 3300035691 Bacteria 16867
195 Ga0373937_0042604 3300036401 Bacteria 4142
196 Ga0373937_0046941 3300036401 Bacteria 3951
197 Ga0316582_0000618 3300036647 Bacteria 13860
198 Ga0316582_0015174 3300036647 Bacteria 4396
199 Ga0316582_0016714 3300036647 Bacteria 4226
200 Ga0316582_0020756 3300036647 Bacteria 3868
201 Ga0316582_0032970 3300036647 Bacteria 3177
202 Ga0316582_0068103 3300036647 Bacteria 2298
203 Ga0316584_0002140 3300036712 Bacteria 12368
204 Ga0316584_0004423 3300036712 Bacteria 9307
205 Ga0316584_0009449 3300036712 Bacteria 6769
206 Ga0316584_0011267 3300036712 Bacteria 6277
207 Ga0316584_0019193 3300036712 Bacteria 4939
208 Ga0316584_0038222 3300036712 Bacteria 3569
209 Ga0316584_0040402 3300036712 Bacteria 3475
210 Ga0316584_0070649 3300036712 Bacteria 2616
211 Ga0400484_05050 3300038725 Bacteria 20898
212 Ga0400484_07955 3300038725 Bacteria 7254
213 Ga0400484_15756 3300038725 Bacteria 14988
214 Ga0400484_29565 3300038725 Bacteria 18179
215 Ga0400490_00224 3300038726 Bacteria 9063
216 Ga0400490_00822 3300038726 Bacteria 38098
217 Ga0400490_03517 3300038726 Bacteria 18395
218 Ga0400490_06574 3300038726 Bacteria 20954
219 Ga0400490_08397 3300038726 Bacteria 12216
220 Ga0400490_10945 3300038726 Bacteria 4537
221 Ga0400490_15793 3300038726 Bacteria 1228
222 Ga0400490_29861 3300038726 Bacteria 2330
223 Ga0400490_36858 3300038726 Bacteria 32496
224 Ga0400490_39253 3300038726 Bacteria 9947
225 Ga0400490_42257 3300038726 Bacteria 10640
226 Ga0400485_10051 3300038735 Bacteria 70678
227 Ga0400488_07856 3300038741 Bacteria 3651
228 Ga0400488_09807 3300038741 Bacteria 2554
229 Ga0400488_29026 3300038741 Bacteria 6198
230 Ga0400488_46543 3300038741 Bacteria 4974
231 Ga0400488_47363 3300038741 Bacteria 4458
232 Ga0400488_53270 3300038741 Bacteria 11614
233 Ga0400488_62172 3300038741 Bacteria 8224
234 Ga0400488_63472 3300038741 Bacteria 27269
235 Ga0400486_18851 3300038742 Bacteria 47783
236 Ga0400486_19627 3300038742 Bacteria 369894
237 Ga0400486_29154 3300038742 Bacteria 9262
238 Ga0400483_029154 3300039062 Bacteria 20593
239 Ga0400483_060861 3300039062 Bacteria 14551
240 Ga0400483_076133 3300039062 Bacteria 9214
241 Ga0400483_084870 3300039062 Bacteria 8827
242 Ga0400483_105477 3300039062 Bacteria 2432
243 Ga0400483_105875 3300039062 Bacteria 7609
244 Ga0400483_116016 3300039062 Bacteria 8224
245 Ga0400483_116880 3300039062 Unclassified 2519
246 Ga0400483_127954 3300039062 Bacteria 4956
247 Ga0400483_155035 3300039062 Bacteria 1749
248 Ga0400483_214238 3300039062 Bacteria 8620
249 Ga0400483_245353 3300039062 Bacteria 10116
250 Ga0400483_250470 3300039062 Bacteria 1939
251 Ga0400483_261785 3300039062 Bacteria 3413
252 Ga0400483_279976 3300039062 Bacteria 1157
253 Ga0400483_288087 3300039062 Bacteria 26272
254 Ga0400489_15883 3300039093 Bacteria 11324
255 Ga0400487_12251 3300039110 Bacteria 1627
256 Ga0400487_38243 3300039110 Bacteria 71080
257 Ga0400487_46216 3300039110 Bacteria 6977
258 Ga0400487_51348 3300039110 Bacteria 7047
259 Ga0400487_51369 3300039110 Bacteria 98129
260 Ga0400487_60170 3300039110 Bacteria 10856
261 Ga0400487_61225 3300039110 Bacteria 55886
262 Ga0439435_0008339 3300042436 Bacteria 2400
263 Ga0451576_0012323 3300045051 Bacteria 9614
264 Ga0495592_0017898 3300046454 Bacteria 5386
265 Ga0495629_0204886 3300046459 Bacteria 1363
266 Ga0495582_0063818 3300046473 Bacteria 2034
267 Ga0495608_0012516 3300046511 Bacteria 5886
268 Ga0495628_0081807 3300046516 Bacteria 2508
269 Ga0495630_0129366 3300046517 Bacteria 1917
270 Ga0495647_0057201 3300046681 Bacteria 1530
271 Ga0495669_0000860 3300046684 Bacteria 12848
272 Ga0495613_0009892 3300046689 Bacteria 7089
273 Ga0495600_0079376 3300046809 Bacteria 2143
274 Ga0495600_0247276 3300046809 Bacteria 1135
275 Ga0495604_0019069 3300047317 Bacteria 5493
276 Ga0495684_0000549 3300047471 Bacteria 30432
277 Ga0496102_0083668 3300048905 Bacteria 2944
278 Ga0496104_0103512 3300048907 Bacteria 2727
279 Ga0496104_0296918 3300048907 Bacteria 1528
280 Ga0496105_0015461 3300048908 Bacteria 6083
281 Ga0496107_0069130 3300048910 Bacteria 2563
282 Ga0496114_0006085 3300048917 Bacteria 9499
283 Ga0496114_0335804 3300048917 Bacteria 1336
284 Ga0501040_0043412 3300049576 Bacteria 3065
285 Ga0501042_0000788 3300049578 Bacteria 17357
286 Ga0501068_0047432 3300049584 Bacteria 2592
287 Ga0501071_0241705 3300049587 Bacteria 1361
288 Ga0501075_0083662 3300049591 Bacteria 2417
289 Ga0501081_0032424 3300049743 Bacteria 3544
290 Ga0501045_0056473 3300049824 Bacteria 2871
291 nmdc:mga05p37_20827_c1 3300050507 Bacteria 7937
292 nmdc:mga05p37_266379_c1 3300050507 Bacteria 2049
293 nmdc:mga05p37_4435_c1 3300050507 Bacteria 16400
294 nmdc:mga05p37_4747_c1 3300050507 Bacteria 15879
295 nmdc:mga05p37_6800_c1 3300050507 Bacteria 13477
296 nmdc:mga05p37_93344_c1 3300050507 Bacteria 3708
297 nmdc:mga05p37_99728_c2 3300050507 Bacteria 3140
298 nmdc:mga06r32_72302_c1 3300050510 Bacteria 3339
299 nmdc:mga08y16_13907_c1 3300050511 Bacteria 8469
300 nmdc:mga08y16_49082_c1 3300050511 Bacteria 4417
301 nmdc:mga08y16_65538_c1 3300050511 Bacteria 3792
302 nmdc:mga08y16_7648_c1 3300050511 Bacteria 11308
303 nmdc:mga0n895_125842_c1 3300050512 Bacteria 2586
304 nmdc:mga0n895_35_c1 3300050512 Bacteria 79696
305 nmdc:mga0n895_45421_c1 3300050512 Bacteria 4287
306 nmdc:mga0rr50_1_c1 3300050513 Bacteria 558123
307 nmdc:mga0rr50_24759_c1 3300050513 Bacteria 4163
308 nmdc:mga0rr50_4270_c1 3300050513 Bacteria 8364
309 nmdc:mga0rr50_739_c1 3300050513 Bacteria 17619
310 nmdc:mga08x19_120232_c1 3300050514 Bacteria 1760
311 nmdc:mga08x19_755_c1 3300050514 Bacteria 20656
312 nmdc:mga0a205_18064_c1 3300050515 Bacteria 6626
313 nmdc:mga0a205_40758_c1 3300050515 Bacteria 4471
314 nmdc:mga0a205_58124_c1 3300050515 Bacteria 3735
315 Ga0495601_0005982 3300053077 Bacteria 7098
316 Ga0495619_0008210 3300053085 Bacteria 6602
317 Ga0495619_0101287 3300053085 Bacteria 1961
318 Ga0501040_0000546
319 Ga0065715_10019175
320 Ga0065715_10022021
321 Ga0065707_10099216
322 Ga0070690_100085268
323 Ga0068869_100123790
324 Ga0068868_100010444
325 Ga0070660_100047079
326 Ga0070691_10000294
327 Ga0070687_100012087
328 Ga0070675_100025331
329 Ga0070674_100005690
330 Ga0070673_100367770
331 Ga0070688_100016545
332 Ga0070688_100028912
333 Ga0070667_100016620
334 Ga0070714_100003779
335 Ga0070701_10111001
336 Ga0070705_100004380
337 Ga0070700_100254893
338 Ga0070694_100021073
339 Ga0070708_100018024
340 Ga0070708_100321494
341 Ga0070681_10223899
342 Ga0068867_100084989
343 Ga0070707_100094266
344 Ga0070698_100031169
345 Ga0070699_100000613
346 Ga0070679_100002755
347 Ga0070686_100000398
348 Ga0070665_100005113
349 Ga0070704_100064359
350 Ga0068854_100003653
351 Ga0068856_100011939
352 Ga0070702_100000788
353 Ga0068866_10133470
354 Ga0068861_100121243
355 Ga0068863_100158632
356 Ga0068858_100076257
357 Ga0081455_10015660
358 Ga0081455_10081322
359 Ga0070715_10010335
360 Ga0070715_10026231
361 Ga0097621_100013084
362 Ga0097621_100033891
363 Ga0097621_100034731
364 Ga0068871_100010644
365 Ga0068871_100014383
366 Ga0068871_100044009
367 Ga0075428_100256558
368 Ga0075431_100185240
369 Ga0075433_10046439
370 Ga0075434_100007156
371 Ga0075434_100012495
372 Ga0075434_100240880
373 Ga0075436_100004597
374 Ga0075436_100010894
375 Ga0075436_100094514
376 Ga0075435_100000346
377 Ga0075435_100000679
378 Ga0075435_100017671
379 Ga0075435_100061060
380 Ga0075435_100115317
381 Ga0105240_10304962
382 Ga0111539_10004361
383 Ga0111539_10011775
384 Ga0114129_10006811
385 Ga0114129_10017617
386 Ga0114129_10042962
387 Ga0114129_10053118
388 Ga0114129_10059465
389 Ga0114129_10092160
390 Ga0105243_10104405
391 Ga0105241_10125175
392 Ga0105242_10029452
393 Ga0105248_10027904
394 Ga0105248_10099627
395 Ga0105249_10334996
396 Ga0157374_10162550
397 Ga0157375_10031653
398 Ga0157375_10126631
399 Ga0163163_10433882
400 Ga0157380_10356311
401 Ga0157379_10012034
402 Ga0157379_10356212
403 Ga0157376_10006020
404 Ga0207680_10007834
405 Ga0207685_10018711
406 Ga0207645_10012128
407 Ga0207645_10111408
408 Ga0207705_10074935
409 Ga0207654_10037638
410 Ga0207707_10179688
411 Ga0207695_10249319
412 Ga0207695_10325868
413 Ga0207657_10017371
414 Ga0207646_10090478
415 Ga0207681_10007307
416 Ga0207681_10100455
417 Ga0207659_10144524
418 Ga0207687_10033355
419 Ga0207706_10112391
420 Ga0207709_10003321
421 Ga0207691_10078571
422 Ga0207691_10163449
423 Ga0207691_10191771
424 Ga0207711_10061169
425 Ga0207711_10122057
426 Ga0207667_10050737
427 Ga0207651_10112041
428 Ga0207651_10118817
429 Ga0207668_10009891
430 Ga0207640_10037083
431 Ga0207640_10065647
432 Ga0207658_10031879
433 Ga0207677_10169908
434 Ga0207648_10027273
435 Ga0207675_100000511
436 Ga0207675_100155191
437 Ga0207428_10009908
438 Ga0207428_10027420
439 Ga0268265_10017232
440 Ga0316579_10001196
441 Ga0316579_10001295
442 Ga0316579_10009649
443 Ga0316579_10049475
444 Ga0316576_10000186
445 Ga0316576_10020789
446 Ga0316576_10044031
447 Ga0316576_10046643
448 Ga0316576_10104701
449 Ga0316576_10237588
450 Ga0316578_10000961
451 Ga0316578_10003348
452 Ga0316578_10005011
453 Ga0316578_10010144
454 Ga0316578_10026347
455 Ga0316578_10029129
456 Ga0316578_10033284
457 Ga0316578_10035612
458 Ga0316578_10120591
459 Ga0316577_10000006
460 Ga0316577_10001477
461 Ga0316577_10006911
462 Ga0316577_10070523
463 Ga0316585_10000238
464 Ga0316585_10010634
465 Ga0316585_10029125
466 Ga0316580_10000036
467 Ga0316580_10002460
468 Ga0316580_10010830
469 Ga0316593_10000123
470 Ga0316593_10001307
471 Ga0316593_10002470
472 Ga0316593_10002493
473 Ga0316593_10003445
474 Ga0316593_10004696
475 Ga0316592_1001505
476 Ga0316592_1001684
477 Ga0316592_1006226
478 Ga0316592_1007179
479 Ga0316586_1006959
480 Ga0316588_1000251
481 Ga0316588_1002228
482 Ga0316588_1002564
483 Ga0316588_1013424
484 Ga0316588_1018304
485 Ga0316587_1000612
486 Ga0316596_1000343
487 Ga0316596_1000362
488 Ga0316596_1000512
489 Ga0316596_1001190
490 Ga0316596_1001650
491 Ga0316596_1001778
492 Ga0316596_1004295
493 Ga0316596_1006847
494 Ga0316596_1016539
495 Ga0373930_0000261
496 Ga0373950_0004477
497 Ga0373959_0011621
498 Ga0373928_0001472
499 Ga0373929_0010151
500 Ga0373949_0030185
501 Ga0373939_0001921
502 Ga0373941_0000071
503 Ga0373960_0000070
504 Ga0373943_0056406
505 Ga0373942_0000904
506 Ga0373961_0001878
507 Ga0373962_0000419
508 Ga0316574_0000233
509 Ga0316574_0015418
510 Ga0316574_0032673
511 Ga0373931_0000441
512 Ga0373937_0042604
513 Ga0373937_0046941
514 Ga0316582_0000618
515 Ga0316582_0015174
516 Ga0316582_0016714
517 Ga0316582_0020756
518 Ga0316582_0032970
519 Ga0316582_0068103
520 Ga0316584_0002140
521 Ga0316584_0004423
522 Ga0316584_0009449
523 Ga0316584_0011267
524 Ga0316584_0019193
525 Ga0316584_0038222
526 Ga0316584_0040402
527 Ga0316584_0070649
528 Ga0400484_05050
529 Ga0400484_07955
530 Ga0400484_15756
531 Ga0400484_29565
532 Ga0400490_00224
533 Ga0400490_00822
534 Ga0400490_03517
535 Ga0400490_06574
536 Ga0400490_08397
537 Ga0400490_10945
538 Ga0400490_15793
539 Ga0400490_29861
540 Ga0400490_36858
541 Ga0400490_39253
542 Ga0400490_42257
543 Ga0400485_10051
544 Ga0400488_07856
545 Ga0400488_09807
546 Ga0400488_29026
547 Ga0400488_46543
548 Ga0400488_47363
549 Ga0400488_53270
550 Ga0400488_62172
551 Ga0400488_63472
552 Ga0400486_18851
553 Ga0400486_19627
554 Ga0400486_29154
555 Ga0400483_029154
556 Ga0400483_060861
557 Ga0400483_076133
558 Ga0400483_084870
559 Ga0400483_105477
560 Ga0400483_105875
561 Ga0400483_116016
562 Ga0400483_116880
563 Ga0400483_127954
564 Ga0400483_155035
565 Ga0400483_214238
566 Ga0400483_245353
567 Ga0400483_250470
568 Ga0400483_261785
569 Ga0400483_279976
570 Ga0400483_288087
571 Ga0400489_15883
572 Ga0400487_12251
573 Ga0400487_38243
574 Ga0400487_46216
575 Ga0400487_51348
576 Ga0400487_51369
577 Ga0400487_60170
578 Ga0400487_61225
579 Ga0439435_0008339
580 Ga0451576_0012323
581 Ga0495592_0017898
582 Ga0495629_0204886
583 Ga0495582_0063818
584 Ga0495608_0012516
585 Ga0495628_0081807
586 Ga0495630_0129366
587 Ga0495647_0057201
588 Ga0495669_0000860
589 Ga0495613_0009892
590 Ga0495600_0079376
591 Ga0495600_0247276
592 Ga0495604_0019069
593 Ga0495684_0000549
594 Ga0496102_0083668
595 Ga0496104_0103512
596 Ga0496104_0296918
597 Ga0496105_0015461
598 Ga0496107_0069130
599 Ga0496114_0006085
600 Ga0496114_0335804
601 Ga0501040_0043412
602 Ga0501042_0000788
603 Ga0501068_0047432
604 Ga0501071_0241705
605 Ga0501075_0083662
606 Ga0501081_0032424
607 Ga0501045_0056473
608 nmdc:mga05p37_20827_c1
609 nmdc:mga05p37_266379_c1
610 nmdc:mga05p37_4435_c1
611 nmdc:mga05p37_4747_c1
612 nmdc:mga05p37_6800_c1
613 nmdc:mga05p37_93344_c1
614 nmdc:mga05p37_99728_c2
615 nmdc:mga06r32_72302_c1
616 nmdc:mga08y16_13907_c1
617 nmdc:mga08y16_49082_c1
618 nmdc:mga08y16_65538_c1
619 nmdc:mga08y16_7648_c1
620 nmdc:mga0n895_125842_c1
621 nmdc:mga0n895_35_c1
622 nmdc:mga0n895_45421_c1
623 nmdc:mga0rr50_1_c1
624 nmdc:mga0rr50_24759_c1
625 nmdc:mga0rr50_4270_c1
626 nmdc:mga0rr50_739_c1
627 nmdc:mga08x19_120232_c1
628 nmdc:mga08x19_755_c1
629 nmdc:mga0a205_18064_c1
630 nmdc:mga0a205_40758_c1
631 nmdc:mga0a205_58124_c1
632 Ga0495601_0005982
633 Ga0495619_0008210
634 Ga0495619_0101287

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21016

RlmN_N

Ribosomal RNA large subunit methyltransferase N-terminal domain

21

80

0.98

PF04055

Radical_SAM

Radical SAM superfamily

123

296

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fz6-assembly2.cif.gz_B crystal structure of a radical sam methyltransferase from sphaerobacter thermophilus 0.9441 6 342
3rf9-assembly1.cif.gz_B x-ray structure of rlmn from escherichia coli 0.9405 5 333
4pl1-assembly2.cif.gz_A x-ray crystal structure of c118a rlmn from escherichia coli with s-adenosylmethionine 0.9382 5 333
5hr7-assembly2.cif.gz_B x-ray crystal structure of c118a rlmn from escherichia coli with cross-linked in vitro transcribed trna 0.9376 4 341
5hr6-assembly2.cif.gz_B x-ray crystal structure of c118a rlmn with cross-linked trna purified from escherichia coli 0.9365 7 341
ID Description Score Start End Superfamily
af_A0A1D6MYU6_82_194_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9636 108 210 3.20.20.70
af_Q2FZ66_80_363_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9582 70 343 3.20.20.70
af_A0A1D6MYU6_195_288_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.958 261 341 3.20.20.70
af_Q54J76_110_396_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9547 71 346 3.20.20.70
af_P9WH15_79_363_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.953 72 342 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A2V8BQF0-F1-model_v4 23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN 0.9918 1 327 GO:0005737
GO:0008173
GO:0030488
GO:0046872
GO:0051539
GO:0070475
AF-A0A521SZR9-F1-model_v4 Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase) 0.9878 6 347 GO:0000049
GO:0002935
GO:0005737
GO:0019843
GO:0030488
GO:0046872
GO:0051539
GO:0070040
GO:0070475
AF-A0A7Y8M136-F1-model_v4 23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN 0.9871 113 341 GO:0008168
GO:0030488
GO:0046872
GO:0051539
GO:0070475
AF-A0A2V8BQF0-F1-model_v4 23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN 0.9828 1 327 GO:0005737
GO:0008173
GO:0030488
GO:0046872
GO:0051539
GO:0070475
AF-A0A521SZR9-F1-model_v4 Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase) 0.9821 6 347 GO:0000049
GO:0002935
GO:0005737
GO:0019843
GO:0030488
GO:0046872
GO:0051539
GO:0070040
GO:0070475

Map