F403848

General Info

Members Datasets Scaffolds Average Seq Length
316 165 304 300

Family's Representative Sequence

Representative Sequence 3300046558|Ga0495633_0000527|Ga0495633_0000527_12845_13822
Length 325
Sequence MNNIPNHWLAIMDKLRSMEIFVAVVDTGNFTAAAASFDISPVMVGKHIAQLEATLGARLLTRTTRRQSLTEIGRQYVDSCRAILAQIAAAESGAEAMRSVPRGRLRITAPFSFGSEWLTPAISDYLGLHPEVSVDLNLNDRMVDLVEEGYDAAVRIGALDDSGMIARPLFHYAMAICASPAYLARHGTPQTPDDLAAHECLDFMVGTVGVHWRLQSIQELRGKREQAPSRFRTNSGQALRMAALKDFGIVMQAEVLLAQDIAAGRLVPVLCGYLPAPRPMHLVYPRDRQATPKLTTFIDFMVERFGPAASLPLASSAQGTALTAP

Samples

Sample ID Description Type Environment
1 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
2 2643221638 Duganella sp. Root336D2 Isolate Unclassified
3 2738541297 Duganella sp. GV083 Isolate Unclassified
4 2738541357 Duganella sp. GV053 Isolate Unclassified
5 2738543003 Duganella sp. GV066 Isolate Unclassified
6 2738543026 Duganella sp. GV089 Isolate Unclassified
7 2738543029 Duganella sp. GV039 Isolate Unclassified
8 2842711865 Duganella sp. R-73148 Isolate Unclassified
9 2857564685 Duganella sp. R-74599 Isolate Unclassified
10 2904424332 Duganella sp. 1411 Isolate Rhizosphere
11 2945961074 Pseudomonas sp. W2I6 Isolate Rhizosphere
12 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
13 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
14 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
15 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
16 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
17 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
18 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
19 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
20 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
22 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
23 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
24 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
25 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
26 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
27 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
28 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
29 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
42 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
43 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
49 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
50 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
51 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
52 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
53 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
54 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
55 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
56 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
66 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
75 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
79 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
82 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
88 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
95 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
96 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
97 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
98 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
99 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
100 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
103 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
104 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
105 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
106 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
109 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
110 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
111 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
112 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
113 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
114 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
115 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
116 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
117 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
118 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
119 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
120 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
124 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
125 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
126 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
127 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
128 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
129 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
132 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
133 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
134 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
135 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
136 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
137 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
138 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
139 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
140 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
141 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
142 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
143 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
144 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
145 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
146 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
149 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
160 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
161 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
165 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.89
Metatranscriptomes 0
Isolates 4.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.48
Nodule 1.27
Rhizoplane 0.95
Rhizosphere 54.43
Stem 0
Stem Tuber 0
Unclassified 14.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1001865 3300002738 Bacteria 6420
2 JGI25154J39366_1003838 3300002738 Bacteria 2942
3 JGI25158J39367_1000221 3300002739 Bacteria 13394
4 JGI25158J39367_1001715 3300002739 Bacteria 3753
5 JGI25152J39213_1000217 3300002773 Bacteria 39039
6 JGI25150J39212_1001616 3300002774 Bacteria 6137
7 JGI25150J39212_1001645 3300002774 Bacteria 6071
8 JGI25150J39212_1001654 3300002774 Bacteria 6042
9 JGI25159J45721_1006387 3300002987 Bacteria 3534
10 rootH1_10021089 3300003316 Bacteria 7399
11 rootH1_10023663 3300003316 Bacteria 1461
12 rootH1_10023663 3300003323 Bacteria 3454
13 rootL2_10328082 3300003322 Unclassified 1594
14 JGI25161J50226_1000162 3300003374 Bacteria 46749
15 JGI25161J50226_1001520 3300003374 Bacteria 6850
16 JGI25161J50226_1004774 3300003374 Bacteria 2777
17 JGI25404J52841_10011482 3300003659 Bacteria 1911
18 Ga0055526_1000161 3300003771 Bacteria 59705
19 Ga0055526_1000163 3300003771 Bacteria 58968
20 Ga0055526_1000269 3300003771 Bacteria 43927
21 Ga0055526_1000309 3300003771 Bacteria 40758
22 Ga0055526_1001981 3300003771 Bacteria 14122
23 Ga0055526_1007917 3300003771 Bacteria 5409
24 Ga0055537_1000035 3300003773 Bacteria 96274
25 Ga0055537_1003538 3300003773 Bacteria 4777
26 Ga0055537_1004110 3300003773 Bacteria 4253
27 Ga0055537_1014110 3300003773 Bacteria 1465
28 Ga0055524_1000015 3300003775 Bacteria 246493
29 Ga0055524_1000615 3300003775 Bacteria 25550
30 Ga0055524_1001052 3300003775 Bacteria 17032
31 Ga0055524_1001567 3300003775 Bacteria 12852
32 Ga0055524_1002035 3300003775 Bacteria 10762
33 Ga0055524_1002322 3300003775 Bacteria 9895
34 Ga0055534_1000843 3300003784 Bacteria 14132
35 Ga0055534_1002462 3300003784 Bacteria 6394
36 Ga0055534_1007197 3300003784 Bacteria 2691
37 Ga0055528_1000058 3300003790 Bacteria 88086
38 Ga0055530_10000057 3300003791 Bacteria 100782
39 Ga0055530_10001617 3300003791 Bacteria 16165
40 Ga0055530_10004677 3300003791 Bacteria 6944
41 Ga0055530_10012277 3300003791 Bacteria 2999
42 Ga0055531_10003927 3300003794 Bacteria 9251
43 Ga0055531_10012028 3300003794 Bacteria 4109
44 Ga0055543_1000111 3300004625 Bacteria 70136
45 Ga0055543_1003238 3300004625 Bacteria 4928
46 Ga0065165_1000351 3300005262 Bacteria 75383
47 Ga0065165_1008240 3300005262 Bacteria 4928
48 Ga0070681_10065092 3300005458 Bacteria 3615
49 Ga0070665_100057673 3300005548 Bacteria 3893
50 Ga0068854_100006537 3300005578 Bacteria 7418
51 Ga0068858_100266868 3300005842 Bacteria 1628
52 Ga0081540_1000399 3300005983 Bacteria 42998
53 Ga0075362_10050100 3300006177 Bacteria 1866
54 Ga0075367_10070129 3300006178 Bacteria 2106
55 Ga0075366_10012605 3300006195 Bacteria 4799
56 Ga0075428_100049963 3300006844 Bacteria 4587
57 Ga0075430_100210738 3300006846 Bacteria 1612
58 Ga0075431_100037875 3300006847 Bacteria 4965
59 Ga0079104_1002960 3300006946 Bacteria 8374
60 Ga0099826_10000003 3300006948 Bacteria 1067817
61 Ga0105244_10000048 3300009036 Bacteria 141340
62 Ga0105244_10000397 3300009036 Bacteria 40343
63 Ga0105244_10001968 3300009036 Bacteria 15915
64 Ga0114129_10378958 3300009147 Bacteria 1869
65 Ga0105238_10041196 3300009551 Bacteria 4678
66 Ga0105239_10093724 3300010375 Bacteria 3316
67 Ga0157370_10005780 3300013104 Bacteria 13821
68 Ga0182006_1000014 3300015261 Bacteria 340159
69 Ga0182007_10000096 3300015262 Bacteria 62363
70 Ga0182005_1000014 3300015265 Bacteria 389763
71 Ga0213872_10006043 3300021361 Bacteria 6127
72 Ga0209436_100005 3300025208 Bacteria 151087
73 Ga0209436_100292 3300025208 Bacteria 23109
74 Ga0209436_105934 3300025208 Bacteria 2738
75 Ga0209436_106111 3300025208 Bacteria 2676
76 Ga0207425_1000001 3300025245 Bacteria 2525432
77 Ga0207425_1000428 3300025245 Bacteria 27931
78 Ga0207425_1000474 3300025245 Bacteria 25484
79 Ga0209646_1000087 3300025246 Bacteria 193273
80 Ga0209129_1000093 3300025258 Bacteria 173163
81 Ga0209565_1000009 3300025263 Bacteria 751701
82 Ga0209565_1001220 3300025263 Bacteria 12133
83 Ga0209565_1002004 3300025263 Bacteria 7911
84 Ga0209565_1007206 3300025263 Bacteria 3025
85 Ga0209565_1026603 3300025263 Bacteria 1158
86 Ga0209673_1000036 3300025273 Bacteria 323162
87 Ga0209130_1000055 3300025284 Bacteria 211696
88 Ga0209130_1000853 3300025284 Bacteria 25229
89 Ga0209675_1000013 3300025291 Bacteria 448220
90 Ga0209675_1000634 3300025291 Bacteria 24993
91 Ga0209675_1005995 3300025291 Bacteria 4974
92 Ga0209675_1039465 3300025291 Bacteria 1045
93 Ga0209025_1014127 3300025294 Bacteria 4950
94 Ga0209564_1000006 3300025295 Bacteria 1100927
95 Ga0209564_1000038 3300025295 Bacteria 414357
96 Ga0209564_1000122 3300025295 Bacteria 203709
97 Ga0209564_1000124 3300025295 Bacteria 202046
98 Ga0209564_1000751 3300025295 Bacteria 45957
99 Ga0209564_1013717 3300025295 Bacteria 3418
100 Ga0209564_1049225 3300025295 Bacteria 1045
101 Ga0209758_1000055 3300025297 Bacteria 336183
102 Ga0209758_1000149 3300025297 Bacteria 163504
103 Ga0209050_1000092 3300025298 Bacteria 252702
104 Ga0209050_1000304 3300025298 Bacteria 100918
105 Ga0209050_1001070 3300025298 Bacteria 33611
106 Ga0209050_1002850 3300025298 Bacteria 13715
107 Ga0209256_1000005 3300025299 Bacteria 1315082
108 Ga0209256_1000106 3300025299 Bacteria 187258
109 Ga0209256_1000586 3300025299 Bacteria 50850
110 Ga0209256_1000778 3300025299 Bacteria 41213
111 Ga0209256_1000879 3300025299 Bacteria 37144
112 Ga0209256_1041987 3300025299 Bacteria 1158
113 Ga0207426_1002992 3300025302 Bacteria 9840
114 Ga0209051_1052871 3300025303 Bacteria 1338
115 Ga0209257_1000010 3300025304 Bacteria 1158682
116 Ga0209257_1011753 3300025304 Bacteria 4161
117 Ga0207655_1000029 3300025728 Bacteria 432187
118 Ga0207655_1000088 3300025728 Bacteria 205698
119 Ga0207655_1009747 3300025728 Bacteria 5922
120 Ga0207647_10018385 3300025904 Bacteria 4729
121 Ga0207684_10430439 3300025910 Unclassified 1133
122 Ga0207694_10012971 3300025924 Bacteria 6275
123 Ga0207694_10094576 3300025924 Bacteria 2361
124 Ga0207640_10034923 3300025981 Bacteria 3142
125 Ga0207703_10213284 3300026035 Bacteria 1723
126 Ga0209281_1001215 3300027111 Bacteria 17396
127 Ga0209282_1000002 3300027666 Bacteria 1067825
128 Ga0268266_10119912 3300028379 Bacteria 2340
129 Ga0307515_10032849 3300028794 Bacteria 8573
130 Ga0307513_10060607 3300031456 Bacteria 4011
131 Ga0307408_100000022 3300031548 Bacteria 310242
132 Ga0307408_100000498 3300031548 Bacteria 34159
133 Ga0307408_100005437 3300031548 Bacteria 8529
134 Ga0307408_100016827 3300031548 Bacteria 4887
135 Ga0307408_100034158 3300031548 Bacteria 3559
136 Ga0307408_100063355 3300031548 Bacteria 2704
137 Ga0265314_10060293 3300031711 Bacteria 2590
138 Ga0307518_10026887 3300031838 Bacteria 4149
139 Ga0307412_10000107 3300031911 Bacteria 66833
140 Ga0307416_100006600 3300032002 Bacteria 7279
141 Ga0373939_0002412 3300035114 Bacteria 4405
142 Ga0395905_0000772 3300037471 Bacteria 42135
143 Ga0395905_0337421 3300037471 Bacteria 1398
144 Ga0436361_0311528 3300039447 Bacteria 4028
145 Ga0436361_0840076 3300039447 Bacteria 9625
146 Ga0436361_1123708 3300039447 Bacteria 8347
147 Ga0436361_1134123 3300039447 Bacteria 2864
148 Ga0439435_0001411 3300042436 Bacteria 4427
149 Ga0439460_0038795 3300042461 Bacteria 1390
150 Ga0466969_0004659 3300044656 Bacteria 7309
151 Ga0466972_0059323 3300044658 Bacteria 1837
152 Ga0466973_0057245 3300044659 Bacteria 3556
153 Ga0466965_0001689 3300044683 Bacteria 9050
154 Ga0466965_0103858 3300044683 Bacteria 1455
155 Ga0466966_0014655 3300044684 Bacteria 5190
156 Ga0466961_0000040 3300044693 Bacteria 78691
157 Ga0466963_0003152 3300044694 Bacteria 9359
158 Ga0466964_0088049 3300044706 Bacteria 1346
159 Ga0466968_0021213 3300044735 Bacteria 2629
160 Ga0466970_0030417 3300044765 Bacteria 2847
161 Ga0466970_0129540 3300044765 Bacteria 1385
162 Ga0466957_0000624 3300044842 Bacteria 17915
163 Ga0466959_0005451 3300045049 Bacteria 8712
164 Ga0466958_0016234 3300045836 Bacteria 4283
165 Ga0495617_000147 3300046452 Bacteria 45169
166 Ga0495617_003284 3300046452 Bacteria 6132
167 Ga0495627_001819 3300046453 Bacteria 11352
168 Ga0495590_0000004 3300046457 Bacteria 402091
169 Ga0495591_001555 3300046458 Bacteria 14006
170 Ga0495591_002729 3300046458 Bacteria 9558
171 Ga0495591_022837 3300046458 Bacteria 2015
172 Ga0495638_0000066 3300046460 Bacteria 168673
173 Ga0495638_0002796 3300046460 Bacteria 14002
174 Ga0495638_0003279 3300046460 Bacteria 12760
175 Ga0495638_0118756 3300046460 Bacteria 1564
176 Ga0495653_0000037 3300046463 Bacteria 120575
177 Ga0495650_0000695 3300046471 Bacteria 43367
178 Ga0495650_0000871 3300046471 Bacteria 35889
179 Ga0495650_0001046 3300046471 Bacteria 30824
180 Ga0495605_0000003 3300046474 Bacteria 491502
181 Ga0495584_0009791 3300046491 Bacteria 4930
182 Ga0495584_0016321 3300046491 Bacteria 3787
183 Ga0495585_0003486 3300046492 Bacteria 10615
184 Ga0495596_0000847 3300046500 Bacteria 18503
185 Ga0495596_0006012 3300046500 Bacteria 5662
186 Ga0495596_0006860 3300046500 Bacteria 5191
187 Ga0495607_0005454 3300046501 Bacteria 9100
188 Ga0495607_0047860 3300046501 Bacteria 2502
189 Ga0495607_0055252 3300046501 Bacteria 2285
190 Ga0495583_0000600 3300046506 Bacteria 48984
191 Ga0495583_0007339 3300046506 Bacteria 6950
192 Ga0495583_0043208 3300046506 Bacteria 2099
193 Ga0495606_0000268 3300046507 Bacteria 91857
194 Ga0495606_0001211 3300046507 Bacteria 36201
195 Ga0495606_0004274 3300046507 Bacteria 14413
196 Ga0495606_0004483 3300046507 Bacteria 13920
197 Ga0495606_0009464 3300046507 Bacteria 8241
198 Ga0495610_0000004 3300046512 Bacteria 1006135
199 Ga0495610_0001082 3300046512 Bacteria 24922
200 Ga0495610_0003163 3300046512 Bacteria 13055
201 Ga0495610_0029247 3300046512 Bacteria 2904
202 Ga0495616_0002730 3300046513 Bacteria 11554
203 Ga0495616_0011614 3300046513 Bacteria 5038
204 Ga0495620_0001348 3300046515 Bacteria 14884
205 Ga0495632_0000129 3300046519 Bacteria 77134
206 Ga0495637_0000991 3300046520 Bacteria 17941
207 Ga0495637_0027364 3300046520 Bacteria 2552
208 Ga0495643_0000141 3300046522 Bacteria 115660
209 Ga0495643_0000626 3300046522 Bacteria 42009
210 Ga0495643_0000661 3300046522 Bacteria 40615
211 Ga0495648_0000045 3300046524 Bacteria 172587
212 Ga0495648_0004611 3300046524 Bacteria 11729
213 Ga0495648_0013364 3300046524 Bacteria 6076
214 Ga0495642_0002811 3300046528 Bacteria 6964
215 Ga0495642_0003644 3300046528 Bacteria 6049
216 Ga0495654_0006423 3300046530 Bacteria 6683
217 Ga0495654_0052963 3300046530 Bacteria 1974
218 Ga0495654_0086299 3300046530 Bacteria 1463
219 Ga0495609_0000910 3300046538 Bacteria 21411
220 Ga0495609_0031011 3300046538 Bacteria 2432
221 Ga0495597_0000409 3300046542 Bacteria 37065
222 Ga0495597_0000957 3300046542 Bacteria 22305
223 Ga0495597_0009112 3300046542 Bacteria 4928
224 Ga0495622_0000553 3300046557 Bacteria 22451
225 Ga0495633_0000401 3300046558 Bacteria 45374
226 Ga0495633_0000527 3300046558 Bacteria 38323
227 Ga0495633_0002100 3300046558 Bacteria 14322
228 Ga0495656_0145277 3300046615 Bacteria 1141
229 Ga0495668_0000025 3300046616 Bacteria 304546
230 Ga0495668_0001238 3300046616 Bacteria 25633
231 Ga0495668_0002219 3300046616 Bacteria 16499
232 Ga0495668_0009215 3300046616 Bacteria 6073
233 Ga0495668_0068880 3300046616 Bacteria 1946
234 Ga0495625_0002274 3300046660 Bacteria 21098
235 Ga0495659_0005047 3300046664 Bacteria 4147
236 Ga0495661_0019127 3300046665 Bacteria 4494
237 Ga0495661_0022245 3300046665 Bacteria 4125
238 Ga0495669_0008251 3300046684 Bacteria 4373
239 Ga0495671_0000001 3300046692 Bacteria 1169494
240 Ga0495671_0001021 3300046692 Bacteria 19478
241 Ga0495671_0003266 3300046692 Bacteria 10054
242 Ga0495649_0005761 3300046694 Bacteria 7811
243 Ga0495649_0006594 3300046694 Bacteria 7217
244 Ga0495649_0015329 3300046694 Bacteria 4364
245 Ga0495649_0028470 3300046694 Bacteria 3096
246 Ga0495589_0033900 3300046794 Bacteria 2563
247 Ga0495660_0005066 3300046810 Bacteria 7917
248 Ga0495660_0008979 3300046810 Bacteria 5839
249 Ga0495660_0045195 3300046810 Bacteria 2419
250 Ga0495672_0000505 3300047320 Bacteria 45047
251 Ga0495687_001126 3300047443 Bacteria 25966
252 Ga0495687_001196 3300047443 Bacteria 24836
253 Ga0495687_001213 3300047443 Bacteria 24676
254 Ga0495677_0046134 3300047445 Bacteria 1599
255 Ga0495677_0067392 3300047445 Bacteria 1331
256 Ga0495679_003187 3300047446 Bacteria 7994
257 Ga0495679_014554 3300047446 Bacteria 2908
258 Ga0495679_015785 3300047446 Bacteria 2750
259 Ga0495679_019356 3300047446 Bacteria 2393
260 Ga0495685_001298 3300047447 Bacteria 7619
261 Ga0495673_0000006 3300047469 Bacteria 908691
262 Ga0495673_0001405 3300047469 Bacteria 19337
263 Ga0495626_0048849 3300048091 Unclassified 1962
264 Ga0496103_0001296 3300048906 Bacteria 17015
265 Ga0496111_0005726 3300048914 Bacteria 8013
266 Ga0496115_0074698 3300048918 Bacteria 2753
267 Ga0496116_0017990 3300048919 Bacteria 5464
268 Ga0496116_0027822 3300048919 Bacteria 4107
269 Ga0496117_0000001 3300048920 Bacteria 2526244
270 Ga0496117_0013646 3300048920 Bacteria 7071
271 Ga0496117_0088399 3300048920 Bacteria 2005
272 Ga0496118_0000008 3300048921 Bacteria 644537
273 Ga0496118_0004653 3300048921 Bacteria 16100
274 Ga0496119_0010053 3300048922 Bacteria 8003
275 Ga0496119_0039591 3300048922 Bacteria 3027
276 Ga0496121_0004172 3300048924 Bacteria 19754
277 Ga0496121_0044588 3300048924 Bacteria 3823
278 Ga0496122_0000484 3300048925 Bacteria 82756
279 Ga0496122_0002321 3300048925 Bacteria 27457
280 Ga0496122_0002886 3300048925 Bacteria 23509
281 Ga0496122_0049785 3300048925 Bacteria 3202
282 Ga0496122_0057343 3300048925 Bacteria 2893
283 Ga0496123_0000416 3300048926 Bacteria 77660
284 Ga0496123_0000641 3300048926 Bacteria 58369
285 Ga0496123_0000992 3300048926 Bacteria 43625
286 Ga0496123_0009096 3300048926 Bacteria 8993
287 Ga0496123_0028415 3300048926 Bacteria 4141
288 Ga0496123_0138772 3300048926 Bacteria 1333
289 Ga0496124_0054941 3300048927 Bacteria 3368
290 Ga0496125_0032101 3300048928 Bacteria 4669
291 Ga0496125_0064550 3300048928 Bacteria 2908
292 Ga0496126_0071966 3300048929 Bacteria 3076
293 Ga0495678_001513 3300049459 Bacteria 18039
294 Ga0495678_002394 3300049459 Bacteria 12819
295 Ga0495678_004532 3300049459 Bacteria 8005
296 Ga0495678_034020 3300049459 Bacteria 2100
297 Ga0501269_000155 3300049766 Bacteria 21098
298 Ga0501279_000750 3300049775 Bacteria 4246
299 Ga0501279_004175 3300049775 Bacteria 1895
300 nmdc:mga0k408_76276_c1 3300050493 Bacteria 1959
301 nmdc:mga06r32_263562_c1 3300050510 Bacteria 1711
302 nmdc:mga06r32_53830_c1 3300050510 Bacteria 3857
303 Ga0500618_000630 3300053125 Bacteria 21289
304 Ga0500586_000114 3300053145 Bacteria 14323

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300039447 Ga0436361_0840076 Ga0436361_0840076_2562_3449 264
2 3300025263 Ga0209565_1000009 Ga0209565_1000009618 278
3 3300025273 Ga0209673_1000036 Ga0209673_100003665 278
4 3300025291 Ga0209675_1000013 Ga0209675_100001365 278
5 3300025295 Ga0209564_1000122 Ga0209564_100012265 278
6 3300025299 Ga0209256_1000106 Ga0209256_1000106111 278
7 iso_pu_bacteria 2904424332 2904430627 278
8 3300003316 rootH1_10021089 rootH1_100210895 279
9 3300046460 Ga0495638_0002796 Ga0495638_0002796_8293_9174 280
10 3300047446 Ga0495679_019356 Ga0495679_019356_1373_2254 280
11 3300046500 Ga0495596_0006860 Ga0495596_0006860_1551_2411 281
12 3300046664 Ga0495659_0005047 Ga0495659_0005047_12_908 282
13 3300006846 Ga0075430_100210738 Ga0075430_1002107382 283
14 3300048920 Ga0496117_0088399 Ga0496117_0088399_701_1594 283
15 3300048925 Ga0496122_0057343 Ga0496122_0057343_1481_2359 283
16 3300048926 Ga0496123_0000992 Ga0496123_0000992_36289_37167 283
17 3300050510 nmdc:mga06r32_263562_c1 nmdc:mga06r32_263562_c1_688_1557 283
18 3300003659 JGI25404J52841_10011482 JGI25404J52841_100114821 284
19 3300005983 Ga0081540_1000399 Ga0081540_100039919 284
20 3300006844 Ga0075428_100049963 Ga0075428_1000499636 284
21 3300009147 Ga0114129_10378958 Ga0114129_103789583 284
22 3300009551 Ga0105238_10041196 Ga0105238_100411963 284
23 3300021361 Ga0213872_10006043 Ga0213872_100060434 284
24 3300039447 Ga0436361_0311528 Ga0436361_0311528_1782_2651 284
25 3300042436 Ga0439435_0001411 Ga0439435_0001411_801_1679 284
26 3300042461 Ga0439460_0038795 Ga0439460_0038795_92_970 284
27 iso_pu_bacteria 2643221554 2643788386 284
28 iso_pu_bacteria 2643221638 2644213690 284
29 iso_pu_bacteria 2738541297 2738825175 284
30 iso_pu_bacteria 2738541357 2739148972 284
31 iso_pu_bacteria 2738543003 2739190891 284
32 iso_pu_bacteria 2738543026 2739317368 284
33 iso_pu_bacteria 2738543029 2739335609 284
34 iso_pu_bacteria 2857564685 2857565561 284
35 iso_pu_bacteria 2945961074 2945962986 284
36 3300006847 Ga0075431_100037875 Ga0075431_1000378753 285
37 3300031548 Ga0307408_100005437 Ga0307408_10000543711 285
38 3300031911 Ga0307412_10000107 Ga0307412_1000010761 285
39 3300048919 Ga0496116_0027822 Ga0496116_0027822_785_1690 285
40 3300048920 Ga0496117_0013646 Ga0496117_0013646_2581_3480 285
41 3300048921 Ga0496118_0004653 Ga0496118_0004653_3718_4617 285
42 3300048922 Ga0496119_0010053 Ga0496119_0010053_3918_4853 285
43 3300048922 Ga0496119_0039591 Ga0496119_0039591_615_1514 285
44 3300048924 Ga0496121_0044588 Ga0496121_0044588_1660_2565 285
45 3300048925 Ga0496122_0000484 Ga0496122_0000484_6608_7513 285
46 3300048926 Ga0496123_0000641 Ga0496123_0000641_48953_49858 285
47 3300048928 Ga0496125_0032101 Ga0496125_0032101_2497_3396 285
48 3300050510 nmdc:mga06r32_53830_c1 nmdc:mga06r32_53830_c1_110_1009 285
49 iso_pu_bacteria 2643221554 2643786892 285
50 iso_pu_bacteria 2643221638 2644212635 285
51 3300006178 Ga0075367_10070129 Ga0075367_100701292 286
52 3300006195 Ga0075366_10012605 Ga0075366_100126053 286
53 3300006946 Ga0079104_1002960 Ga0079104_10029605 286
54 3300009036 Ga0105244_10000048 Ga0105244_10000048163 286
55 3300009036 Ga0105244_10000397 Ga0105244_1000039715 286
56 3300013104 Ga0157370_10005780 Ga0157370_100057809 286
57 3300025728 Ga0207655_1000029 Ga0207655_1000029332 286
58 3300025728 Ga0207655_1000088 Ga0207655_1000088190 286
59 3300027111 Ga0209281_1001215 Ga0209281_10012155 286
60 3300032002 Ga0307416_100006600 Ga0307416_1000066003 286
61 3300037471 Ga0395905_0000772 Ga0395905_0000772_2077_2982 286
62 3300046458 Ga0495591_001555 Ga0495591_001555_10311_11210 286
63 3300046491 Ga0495584_0016321 Ga0495584_0016321_1629_2507 286
64 3300046515 Ga0495620_0001348 Ga0495620_0001348_6922_7821 286
65 3300046520 Ga0495637_0027364 Ga0495637_0027364_573_1481 286
66 3300046522 Ga0495643_0000141 Ga0495643_0000141_36606_37523 286
67 3300046694 Ga0495649_0006594 Ga0495649_0006594_3480_4379 286
68 3300047446 Ga0495679_003187 Ga0495679_003187_5840_6739 286
69 3300048925 Ga0496122_0002886 Ga0496122_0002886_16129_17028 286
70 3300048926 Ga0496123_0000416 Ga0496123_0000416_6482_7381 286
71 3300048926 Ga0496123_0138772 Ga0496123_0138772_318_1241 286
72 3300050493 nmdc:mga0k408_76276_c1 nmdc:mga0k408_76276_c1_167_1066 286
73 iso_pu_bacteria 2842711865 2842717164 286
74 3300005578 Ga0068854_100006537 Ga0068854_10000653711 287
75 3300025924 Ga0207694_10012971 Ga0207694_100129714 287
76 3300025981 Ga0207640_10034923 Ga0207640_100349232 287
77 3300046458 Ga0495591_022837 Ga0495591_022837_379_1299 287
78 3300046500 Ga0495596_0000847 Ga0495596_0000847_13788_14666 287
79 3300046500 Ga0495596_0006012 Ga0495596_0006012_2064_2942 287
80 3300046501 Ga0495607_0055252 Ga0495607_0055252_1312_2214 287
81 3300046506 Ga0495583_0007339 Ga0495583_0007339_1277_2155 287
82 3300046513 Ga0495616_0002730 Ga0495616_0002730_4060_4962 287
83 3300046519 Ga0495632_0000129 Ga0495632_0000129_6721_7623 287
84 3300046528 Ga0495642_0003644 Ga0495642_0003644_1792_2694 287
85 3300046530 Ga0495654_0086299 Ga0495654_0086299_286_1188 287
86 3300046615 Ga0495656_0145277 Ga0495656_0145277_211_1113 287
87 3300046616 Ga0495668_0009215 Ga0495668_0009215_2101_3003 287
88 3300046692 Ga0495671_0001021 Ga0495671_0001021_4155_5057 287
89 3300046692 Ga0495671_0003266 Ga0495671_0003266_3341_4219 287
90 3300046694 Ga0495649_0005761 Ga0495649_0005761_2689_3591 287
91 3300046794 Ga0495589_0033900 Ga0495589_0033900_795_1673 287
92 3300046810 Ga0495660_0008979 Ga0495660_0008979_1858_2760 287
93 3300047443 Ga0495687_001196 Ga0495687_001196_5665_6543 287
94 3300048091 Ga0495626_0048849 Ga0495626_0048849_972_1874 287
95 3300049459 Ga0495678_002394 Ga0495678_002394_3169_4071 287
96 3300002739 JGI25158J39367_1001715 JGI25158J39367_10017154 288
97 3300002773 JGI25152J39213_1000217 JGI25152J39213_100021710 288
98 3300002774 JGI25150J39212_1001616 JGI25150J39212_10016164 288
99 3300002774 JGI25150J39212_1001645 JGI25150J39212_10016454 288
100 3300002774 JGI25150J39212_1001654 JGI25150J39212_10016543 288
101 3300003316 rootH1_10023663 rootH1_100236631 288
102 3300003322 rootL2_10328082 rootL2_103280821 288
103 3300003374 JGI25161J50226_1001520 JGI25161J50226_10015202 288
104 3300003374 JGI25161J50226_1004774 JGI25161J50226_10047744 288
105 3300003771 Ga0055526_1000309 Ga0055526_100030925 288
106 3300003771 Ga0055526_1001981 Ga0055526_10019819 288
107 3300003771 Ga0055526_1007917 Ga0055526_10079172 288
108 3300003773 Ga0055537_1000035 Ga0055537_100003564 288
109 3300003773 Ga0055537_1003538 Ga0055537_10035382 288
110 3300003773 Ga0055537_1004110 Ga0055537_10041104 288
111 3300003773 Ga0055537_1014110 Ga0055537_10141102 288
112 3300003775 Ga0055524_1000015 Ga0055524_1000015155 288
113 3300003775 Ga0055524_1000615 Ga0055524_100061515 288
114 3300003775 Ga0055524_1001052 Ga0055524_100105210 288
115 3300003775 Ga0055524_1001567 Ga0055524_10015675 288
116 3300003775 Ga0055524_1002035 Ga0055524_10020353 288
117 3300003784 Ga0055534_1000843 Ga0055534_10008432 288
118 3300003784 Ga0055534_1002462 Ga0055534_10024624 288
119 3300003784 Ga0055534_1007197 Ga0055534_10071972 288
120 3300003790 Ga0055528_1000058 Ga0055528_100005821 288
121 3300003791 Ga0055530_10001617 Ga0055530_100016172 288
122 3300003791 Ga0055530_10004677 Ga0055530_100046776 288
123 3300003791 Ga0055530_10012277 Ga0055530_100122772 288
124 3300003794 Ga0055531_10003927 Ga0055531_100039272 288
125 3300003794 Ga0055531_10012028 Ga0055531_100120282 288
126 3300004625 Ga0055543_1003238 Ga0055543_10032383 288
127 3300005262 Ga0065165_1008240 Ga0065165_10082404 288
128 3300005548 Ga0070665_100057673 Ga0070665_1000576732 288
129 3300006177 Ga0075362_10050100 Ga0075362_100501002 288
130 3300006948 Ga0099826_10000003 Ga0099826_10000003267 288
131 3300009036 Ga0105244_10001968 Ga0105244_1000196812 288
132 3300010375 Ga0105239_10093724 Ga0105239_100937242 288
133 3300025208 Ga0209436_100292 Ga0209436_1002921 288
134 3300025208 Ga0209436_105934 Ga0209436_1059344 288
135 3300025208 Ga0209436_106111 Ga0209436_1061114 288
136 3300025245 Ga0207425_1000001 Ga0207425_10000012228 288
137 3300025245 Ga0207425_1000428 Ga0207425_10004289 288
138 3300025245 Ga0207425_1000474 Ga0207425_100047420 288
139 3300025258 Ga0209129_1000093 Ga0209129_1000093124 288
140 3300025263 Ga0209565_1001220 Ga0209565_10012209 288
141 3300025263 Ga0209565_1002004 Ga0209565_10020046 288
142 3300025263 Ga0209565_1007206 Ga0209565_10072062 288
143 3300025263 Ga0209565_1026603 Ga0209565_10266031 288
144 3300025284 Ga0209130_1000853 Ga0209130_10008533 288
145 3300025291 Ga0209675_1005995 Ga0209675_10059954 288
146 3300025291 Ga0209675_1039465 Ga0209675_10394651 288
147 3300025294 Ga0209025_1014127 Ga0209025_10141275 288
148 3300025295 Ga0209564_1000038 Ga0209564_100003875 288
149 3300025295 Ga0209564_1000751 Ga0209564_100075118 288
150 3300025295 Ga0209564_1049225 Ga0209564_10492252 288
151 3300025297 Ga0209758_1000055 Ga0209758_1000055124 288
152 3300025297 Ga0209758_1000149 Ga0209758_1000149150 288
153 3300025298 Ga0209050_1000092 Ga0209050_1000092182 288
154 3300025298 Ga0209050_1001070 Ga0209050_100107022 288
155 3300025298 Ga0209050_1002850 Ga0209050_10028509 288
156 3300025299 Ga0209256_1000005 Ga0209256_1000005156 288
157 3300025299 Ga0209256_1000586 Ga0209256_100058616 288
158 3300025299 Ga0209256_1000879 Ga0209256_100087910 288
159 3300025299 Ga0209256_1041987 Ga0209256_10419872 288
160 3300025302 Ga0207426_1002992 Ga0207426_10029923 288
161 3300025303 Ga0209051_1052871 Ga0209051_10528712 288
162 3300025304 Ga0209257_1000010 Ga0209257_1000010979 288
163 3300025304 Ga0209257_1011753 Ga0209257_10117534 288
164 3300025728 Ga0207655_1009747 Ga0207655_10097475 288
165 3300025904 Ga0207647_10018385 Ga0207647_100183853 288
166 3300027666 Ga0209282_1000002 Ga0209282_1000002730 288
167 3300028379 Ga0268266_10119912 Ga0268266_101199122 288
168 3300031548 Ga0307408_100000498 Ga0307408_1000004989 288
169 3300031548 Ga0307408_100016827 Ga0307408_1000168273 288
170 3300031548 Ga0307408_100034158 Ga0307408_1000341584 288
171 3300031548 Ga0307408_100063355 Ga0307408_1000633551 288
172 3300031711 Ga0265314_10060293 Ga0265314_100602932 288
173 3300031838 Ga0307518_10026887 Ga0307518_100268874 288
174 3300035114 Ga0373939_0002412 Ga0373939_0002412_2330_3247 288
175 3300037471 Ga0395905_0337421 Ga0395905_0337421_296_1174 288
176 3300044683 Ga0466965_0103858 Ga0466965_0103858_162_1064 288
177 3300044735 Ga0466968_0021213 Ga0466968_0021213_355_1257 288
178 3300044765 Ga0466970_0129540 Ga0466970_0129540_480_1361 288
179 3300046452 Ga0495617_000147 Ga0495617_000147_27778_28713 288
180 3300046453 Ga0495627_001819 Ga0495627_001819_8622_9509 288
181 3300046457 Ga0495590_0000004 Ga0495590_0000004_397959_398879 288
182 3300046458 Ga0495591_002729 Ga0495591_002729_143_1030 288
183 3300046460 Ga0495638_0000066 Ga0495638_0000066_18962_19882 288
184 3300046460 Ga0495638_0003279 Ga0495638_0003279_3508_4422 288
185 3300046460 Ga0495638_0118756 Ga0495638_0118756_93_1028 288
186 3300046463 Ga0495653_0000037 Ga0495653_0000037_8415_9350 288
187 3300046471 Ga0495650_0000695 Ga0495650_0000695_16437_17372 288
188 3300046471 Ga0495650_0000871 Ga0495650_0000871_20695_21615 288
189 3300046471 Ga0495650_0001046 Ga0495650_0001046_15270_16172 288
190 3300046474 Ga0495605_0000003 Ga0495605_0000003_386980_387891 288
191 3300046491 Ga0495584_0009791 Ga0495584_0009791_3659_4573 288
192 3300046492 Ga0495585_0003486 Ga0495585_0003486_9340_10275 288
193 3300046501 Ga0495607_0005454 Ga0495607_0005454_5034_5954 288
194 3300046501 Ga0495607_0047860 Ga0495607_0047860_873_1787 288
195 3300046506 Ga0495583_0000600 Ga0495583_0000600_18301_19221 288
196 3300046506 Ga0495583_0043208 Ga0495583_0043208_1008_1922 288
197 3300046507 Ga0495606_0000268 Ga0495606_0000268_24891_25826 288
198 3300046507 Ga0495606_0001211 Ga0495606_0001211_3071_3991 288
199 3300046507 Ga0495606_0004483 Ga0495606_0004483_5010_5912 288
200 3300046507 Ga0495606_0009464 Ga0495606_0009464_7194_8081 288
201 3300046512 Ga0495610_0000004 Ga0495610_0000004_405764_406699 288
202 3300046512 Ga0495610_0003163 Ga0495610_0003163_1509_2438 288
203 3300046512 Ga0495610_0029247 Ga0495610_0029247_393_1328 288
204 3300046513 Ga0495616_0011614 Ga0495616_0011614_1935_2849 288
205 3300046522 Ga0495643_0000626 Ga0495643_0000626_22272_23192 288
206 3300046522 Ga0495643_0000661 Ga0495643_0000661_13404_14333 288
207 3300046524 Ga0495648_0000045 Ga0495648_0000045_74914_75834 288
208 3300046524 Ga0495648_0004611 Ga0495648_0004611_9963_10898 288
209 3300046524 Ga0495648_0013364 Ga0495648_0013364_2212_3147 288
210 3300046528 Ga0495642_0002811 Ga0495642_0002811_2463_3383 288
211 3300046530 Ga0495654_0052963 Ga0495654_0052963_815_1750 288
212 3300046538 Ga0495609_0000910 Ga0495609_0000910_2640_3554 288
213 3300046538 Ga0495609_0031011 Ga0495609_0031011_106_1035 288
214 3300046542 Ga0495597_0000409 Ga0495597_0000409_33130_34050 288
215 3300046557 Ga0495622_0000553 Ga0495622_0000553_2694_3614 288
216 3300046558 Ga0495633_0000401 Ga0495633_0000401_14346_15266 288
217 3300046558 Ga0495633_0000527 Ga0495633_0000527_12845_13822 288
218 3300046616 Ga0495668_0000025 Ga0495668_0000025_171729_172643 288
219 3300046616 Ga0495668_0001238 Ga0495668_0001238_3129_4049 288
220 3300046616 Ga0495668_0002219 Ga0495668_0002219_9413_10348 288
221 3300046660 Ga0495625_0002274 Ga0495625_0002274_5832_6752 288
222 3300046665 Ga0495661_0019127 Ga0495661_0019127_1341_2276 288
223 3300046665 Ga0495661_0022245 Ga0495661_0022245_1696_2610 288
224 3300046684 Ga0495669_0008251 Ga0495669_0008251_1156_2070 288
225 3300046692 Ga0495671_0000001 Ga0495671_0000001_1053152_1054087 288
226 3300046694 Ga0495649_0015329 Ga0495649_0015329_2621_3550 288
227 3300046694 Ga0495649_0028470 Ga0495649_0028470_1869_2783 288
228 3300046810 Ga0495660_0005066 Ga0495660_0005066_2550_3470 288
229 3300046810 Ga0495660_0045195 Ga0495660_0045195_728_1642 288
230 3300047320 Ga0495672_0000505 Ga0495672_0000505_42583_43512 288
231 3300047443 Ga0495687_001126 Ga0495687_001126_4744_5664 288
232 3300047443 Ga0495687_001213 Ga0495687_001213_19587_20507 288
233 3300047445 Ga0495677_0046134 Ga0495677_0046134_63_977 288
234 3300047445 Ga0495677_0067392 Ga0495677_0067392_60_974 288
235 3300047446 Ga0495679_014554 Ga0495679_014554_1949_2884 288
236 3300047446 Ga0495679_015785 Ga0495679_015785_1684_2598 288
237 3300047447 Ga0495685_001298 Ga0495685_001298_5785_6699 288
238 3300047469 Ga0495673_0000006 Ga0495673_0000006_129803_130714 288
239 3300048906 Ga0496103_0001296 Ga0496103_0001296_6522_7457 288
240 3300048919 Ga0496116_0017990 Ga0496116_0017990_2908_3819 288
241 3300048925 Ga0496122_0049785 Ga0496122_0049785_1849_2784 288
242 3300048926 Ga0496123_0028415 Ga0496123_0028415_1537_2472 288
243 3300048927 Ga0496124_0054941 Ga0496124_0054941_1375_2292 288
244 3300048929 Ga0496126_0071966 Ga0496126_0071966_730_1641 288
245 3300049459 Ga0495678_001513 Ga0495678_001513_1561_2490 288
246 3300049459 Ga0495678_004532 Ga0495678_004532_4897_5817 288
247 3300049459 Ga0495678_034020 Ga0495678_034020_1031_1945 288
248 3300049766 Ga0501269_000155 Ga0501269_000155_11859_12794 288
249 3300049775 Ga0501279_000750 Ga0501279_000750_2090_2980 288
250 3300049775 Ga0501279_004175 Ga0501279_004175_739_1623 288
251 3300053125 Ga0500618_000630 Ga0500618_000630_12419_13339 288
252 3300002739 JGI25158J39367_1000221 JGI25158J39367_10002218 289
253 3300002987 JGI25159J45721_1006387 JGI25159J45721_10063874 289
254 3300003374 JGI25161J50226_1000162 JGI25161J50226_100016236 289
255 3300003771 Ga0055526_1000163 Ga0055526_100016339 289
256 3300003771 Ga0055526_1000269 Ga0055526_100026918 289
257 3300003775 Ga0055524_1002322 Ga0055524_10023224 289
258 3300003791 Ga0055530_10000057 Ga0055530_1000005750 289
259 3300004625 Ga0055543_1000111 Ga0055543_10001112 289
260 3300005262 Ga0065165_1000351 Ga0065165_100035152 289
261 3300005458 Ga0070681_10065092 Ga0070681_100650923 289
262 3300005842 Ga0068858_100266868 Ga0068858_1002668682 289
263 3300025208 Ga0209436_100005 Ga0209436_10000541 289
264 3300025284 Ga0209130_1000055 Ga0209130_100005591 289
265 3300025291 Ga0209675_1000634 Ga0209675_100063411 289
266 3300025295 Ga0209564_1000124 Ga0209564_100012449 289
267 3300025295 Ga0209564_1013717 Ga0209564_10137172 289
268 3300025298 Ga0209050_1000304 Ga0209050_100030430 289
269 3300025299 Ga0209256_1000778 Ga0209256_10007786 289
270 3300025910 Ga0207684_10430439 Ga0207684_104304391 289
271 3300025924 Ga0207694_10094576 Ga0207694_100945763 289
272 3300026035 Ga0207703_10213284 Ga0207703_102132842 289
273 3300028794 Ga0307515_10032849 Ga0307515_100328499 289
274 3300031456 Ga0307513_10060607 Ga0307513_100606072 289
275 3300031548 Ga0307408_100000022 Ga0307408_100000022130 289
276 3300044656 Ga0466969_0004659 Ga0466969_0004659_1458_2381 289
277 3300044658 Ga0466972_0059323 Ga0466972_0059323_84_1007 289
278 3300044659 Ga0466973_0057245 Ga0466973_0057245_1133_2056 289
279 3300044683 Ga0466965_0001689 Ga0466965_0001689_4426_5349 289
280 3300044684 Ga0466966_0014655 Ga0466966_0014655_3845_4768 289
281 3300044693 Ga0466961_0000040 Ga0466961_0000040_48769_49692 289
282 3300044694 Ga0466963_0003152 Ga0466963_0003152_4578_5501 289
283 3300044706 Ga0466964_0088049 Ga0466964_0088049_390_1313 289
284 3300044765 Ga0466970_0030417 Ga0466970_0030417_396_1319 289
285 3300044842 Ga0466957_0000624 Ga0466957_0000624_12146_13069 289
286 3300045049 Ga0466959_0005451 Ga0466959_0005451_7312_8235 289
287 3300045836 Ga0466958_0016234 Ga0466958_0016234_2587_3510 289
288 3300046542 Ga0495597_0009112 Ga0495597_0009112_2122_3009 289
289 3300046616 Ga0495668_0068880 Ga0495668_0068880_710_1597 289
290 3300048918 Ga0496115_0074698 Ga0496115_0074698_577_1464 289
291 3300003771 Ga0055526_1000161 Ga0055526_100016120 290
292 3300015261 Ga0182006_1000014 Ga0182006_1000014241 290
293 3300015262 Ga0182007_10000096 Ga0182007_100000967 290
294 3300015265 Ga0182005_1000014 Ga0182005_1000014247 290
295 3300025295 Ga0209564_1000006 Ga0209564_1000006108 290
296 3300039447 Ga0436361_1123708 Ga0436361_1123708_3387_4274 290
297 3300039447 Ga0436361_1134123 Ga0436361_1134123_1847_2734 290
298 3300046452 Ga0495617_003284 Ga0495617_003284_2948_3877 290
299 3300046507 Ga0495606_0004274 Ga0495606_0004274_4138_5076 290
300 3300046512 Ga0495610_0001082 Ga0495610_0001082_10731_11669 290
301 3300046520 Ga0495637_0000991 Ga0495637_0000991_3990_4919 290
302 3300046542 Ga0495597_0000957 Ga0495597_0000957_13497_14435 290
303 3300046558 Ga0495633_0002100 Ga0495633_0002100_4104_5042 290
304 3300048914 Ga0496111_0005726 Ga0496111_0005726_2387_3304 290
305 3300048920 Ga0496117_0000001 Ga0496117_0000001_2266689_2267606 290
306 3300048921 Ga0496118_0000008 Ga0496118_0000008_384982_385899 290
307 3300048924 Ga0496121_0004172 Ga0496121_0004172_6321_7238 290
308 3300048925 Ga0496122_0002321 Ga0496122_0002321_16623_17540 290
309 3300048926 Ga0496123_0009096 Ga0496123_0009096_749_1666 290
310 3300048928 Ga0496125_0064550 Ga0496125_0064550_208_1125 290
311 3300053145 Ga0500586_000114 Ga0500586_000114_10944_11882 290
312 3300002738 JGI25154J39366_1001865 JGI25154J39366_10018654 291
313 3300002738 JGI25154J39366_1003838 JGI25154J39366_10038382 291
314 3300025246 Ga0209646_1000087 Ga0209646_1000087134 291
315 3300046530 Ga0495654_0006423 Ga0495654_0006423_121_1026 291
316 3300047469 Ga0495673_0001405 Ga0495673_0001405_14473_15378 291

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

15

74

0.98

PF03466

LysR_substrate

LysR substrate binding domain

98

306

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ihs-assembly3.cif.gz_C crystal structure of benm_dbd/catb site 1 dna complex 0.95 1 87
4ihs-assembly1.cif.gz_A crystal structure of benm_dbd/catb site 1 dna complex 0.9491 1 87
4iht-assembly1.cif.gz_A crystal structure of benm_dbd/bena site 1 dna complex 0.9431 1 87
5z4y-assembly1.cif.gz_B crystal structure of pacysb ntd domain with space group p4 0.9428 4 86
4iht-assembly2.cif.gz_C crystal structure of benm_dbd/bena site 1 dna complex 0.942 1 86
ID Description Score Start End Superfamily
af_P37641_3_87_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9969 4 82 1.10.10.10
af_P76250_6_90_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9847 4 86 1.10.10.10
af_P0ACR7_1_84_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9808 5 79 1.10.10.10
af_P77700_7_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9804 5 86 1.10.10.10
af_P77744_4_93_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9751 4 88 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A356JHX6-F1-model_v4 deleted 0.926 111 288
AF-A0A351P061-F1-model_v4 LysR family transcriptional regulator 0.9109 118 288 GO:0003700
GO:0006351
GO:0043565
AF-A0A530K009-F1-model_v4 LysR family transcriptional regulator 0.9019 57 290 GO:0003700
GO:0006351
GO:0043565
AF-K8CRU7-F1-model_v4 deleted 0.8988 112 291
AF-A0A2Z6TGP7-F1-model_v4 deleted 0.8943 49 288

Feature Viewer

pLDDT pTM Quality
87.22 0.73 High
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Predicted Structure (AlphaFold2)

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