F402750

General Info

Members Datasets Scaffolds Average Seq Length
314 194 628 298

Family's Representative Sequence

Representative Sequence 3300031712|Ga0265342_10039694|Ga0265342_100396943
Length 329
Sequence MARGRVAAQLVRRAPVSCYISSQMPQILDGNRVRDEIKSELKHRIEAVTAVGTPPGLAVVLVGNNPASEIYVRNKIKACHDLGIYSESITPSGTISTEELLAIVRDLNARPDIDGILVQLPLPPQVDTKRILLAVSPAKDVDGFHPCNVGNLVASLPGPRACTPAGILELLKRYRISIAGQRAVVVGRSDIVGKPVAMLLLHEHATVTICHSKTADLPAVCREADILVAAMGRAAMITGDYIKQGATVIDVGTNRLDSREDVARIFRNAAEKLASFDKRGSVLVGDVHPLDVVEKASAYTPVPGGVGPLTIAMLMVNTVASAERRAGIC

Samples

Sample ID Description Type Environment
1 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
108 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
109 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
110 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
111 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
112 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
113 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
116 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
119 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
120 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
123 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
132 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
133 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
134 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
135 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
136 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
137 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
138 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
139 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
140 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
141 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
142 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
143 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
144 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
145 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
146 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
147 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
148 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
149 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
150 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
151 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
152 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
155 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
156 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
157 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
158 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
162 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
173 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
174 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
175 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
176 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
177 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
178 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
179 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
180 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
181 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
184 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
185 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
186 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
187 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
188 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
189 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
190 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
191 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
194 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0
Isolates 0.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.18
Nodule 0
Rhizoplane 1.27
Rhizosphere 95.54
Stem 0
Stem Tuber 0
Unclassified 5.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265342_10039694 3300031712 Bacteria 2858
2 MBSR1b_contig_982398 2162886012 Bacteria 1587
3 JGI25151J46595_10048100 3300003187 Bacteria 1477
4 JGI25151J46595_10048103 3300003187 Bacteria 1477
5 Ga0055535_1001374 3300003761 Bacteria 12703
6 Ga0070683_100000011 3300005329 Bacteria 283682
7 Ga0068869_100013258 3300005334 Bacteria 5478
8 Ga0068868_100266687 3300005338 Bacteria 1446
9 Ga0068868_100298978 3300005338 Bacteria 1367
10 Ga0070671_100117580 3300005355 Unclassified 2235
11 Ga0070667_100024478 3300005367 Bacteria 5013
12 Ga0070713_100001053 3300005436 Bacteria 17646
13 Ga0070701_10104299 3300005438 Bacteria 1575
14 Ga0070694_100002380 3300005444 Bacteria 11113
15 Ga0070694_100098359 3300005444 Bacteria 2066
16 Ga0070708_100048110 3300005445 Bacteria 3769
17 Ga0070708_100185582 3300005445 Bacteria 1945
18 Ga0070678_100585037 3300005456 Bacteria 995
19 Ga0070662_100152025 3300005457 Bacteria 1803
20 Ga0070681_10009245 3300005458 Bacteria 9687
21 Ga0068867_100164344 3300005459 Unclassified 1753
22 Ga0068867_100588839 3300005459 Bacteria 968
23 Ga0070706_100052690 3300005467 Bacteria 3755
24 Ga0070706_100123339 3300005467 Bacteria 2416
25 Ga0070707_100106282 3300005468 Bacteria 2722
26 Ga0070698_100005400 3300005471 Bacteria 13971
27 Ga0070698_100183860 3300005471 Bacteria 2028
28 Ga0070699_100003067 3300005518 Bacteria 14819
29 Ga0070699_100179992 3300005518 Bacteria 1876
30 Ga0070679_100403410 3300005530 Bacteria 1313
31 Ga0070684_100000001 3300005535 Bacteria 300240
32 Ga0070684_100011460 3300005535 Bacteria 7061
33 Ga0070684_100024509 3300005535 Bacteria 5062
34 Ga0070684_100138438 3300005535 Bacteria 2200
35 Ga0070697_100064288 3300005536 Bacteria 2997
36 Ga0070697_100202165 3300005536 Bacteria 1689
37 Ga0068853_100113712 3300005539 Bacteria 2407
38 Ga0070672_100388258 3300005543 Bacteria 1195
39 Ga0070686_100051791 3300005544 Bacteria 2615
40 Ga0070695_100012807 3300005545 Bacteria 5035
41 Ga0070665_100271596 3300005548 Bacteria 1697
42 Ga0070665_100376478 3300005548 Bacteria 1427
43 Ga0070704_100075223 3300005549 Bacteria 2466
44 Ga0070704_100171152 3300005549 Bacteria 1727
45 Ga0068855_100012096 3300005563 Bacteria 10425
46 Ga0068855_100054809 3300005563 Bacteria 4686
47 Ga0068855_100092788 3300005563 Bacteria 3482
48 Ga0070664_100026089 3300005564 Bacteria 4845
49 Ga0068857_100003592 3300005577 Bacteria 12976
50 Ga0068854_100138620 3300005578 Bacteria 1864
51 Ga0068859_100038207 3300005617 Bacteria 4817
52 Ga0068866_10105640 3300005718 Bacteria 1561
53 Ga0068866_10205670 3300005718 Bacteria 1179
54 Ga0068863_100054231 3300005841 Bacteria 3799
55 Ga0068858_100482057 3300005842 Bacteria 1197
56 Ga0068860_100029359 3300005843 Bacteria 5288
57 Ga0068860_100147530 3300005843 Bacteria 2264
58 Ga0068862_100041315 3300005844 Bacteria 3923
59 Ga0081539_10004209 3300005985 Bacteria 16230
60 Ga0070717_10008082 3300006028 Bacteria 7845
61 Ga0070717_10160031 3300006028 Bacteria 1953
62 Ga0075363_100214950 3300006048 Bacteria 1101
63 Ga0070716_100103116 3300006173 Bacteria 1753
64 Ga0097621_100138947 3300006237 Bacteria 2075
65 Ga0097621_100332474 3300006237 Bacteria 1348
66 Ga0068871_100005459 3300006358 Bacteria 8917
67 Ga0068871_100076862 3300006358 Bacteria 2758
68 Ga0068871_100254081 3300006358 Bacteria 1532
69 Ga0075428_100064797 3300006844 Bacteria 4002
70 Ga0075430_100037484 3300006846 Bacteria 4109
71 Ga0075431_100040510 3300006847 Bacteria 4801
72 Ga0075431_100140980 3300006847 Bacteria 2485
73 Ga0075429_100000873 3300006880 Bacteria 23784
74 Ga0068865_100003881 3300006881 Bacteria 8969
75 Ga0097620_100038208 3300006931 Bacteria 4817
76 Ga0105240_10058492 3300009093 Bacteria 4812
77 Ga0105240_10174125 3300009093 Bacteria 2546
78 Ga0105240_10195798 3300009093 Bacteria 2373
79 Ga0105240_10859541 3300009093 Bacteria 978
80 Ga0111539_10066727 3300009094 Bacteria 4250
81 Ga0105245_10006803 3300009098 Bacteria 10028
82 Ga0105245_10172193 3300009098 Unclassified 2062
83 Ga0114129_10056445 3300009147 Bacteria 5500
84 Ga0114129_10073867 3300009147 Bacteria 4750
85 Ga0114129_10090017 3300009147 Bacteria 4254
86 Ga0114129_10306826 3300009147 Bacteria 2114
87 Ga0114129_10436211 3300009147 Bacteria 1720
88 Ga0105243_10046132 3300009148 Unclassified 3426
89 Ga0105241_10007248 3300009174 Bacteria 8163
90 Ga0105241_10169324 3300009174 Bacteria 1803
91 Ga0105241_10291833 3300009174 Bacteria 1396
92 Ga0105242_10005738 3300009176 Bacteria 9568
93 Ga0105242_10040076 3300009176 Unclassified 3773
94 Ga0105248_10090233 3300009177 Unclassified 3451
95 Ga0105248_10224698 3300009177 Bacteria 2113
96 Ga0105248_10659139 3300009177 Bacteria 1181
97 Ga0105248_10917594 3300009177 Bacteria 989
98 Ga0105237_10025402 3300009545 Bacteria 6058
99 Ga0105237_10042912 3300009545 Bacteria 4558
100 Ga0105238_10007522 3300009551 Bacteria 10909
101 Ga0105238_10025223 3300009551 Bacteria 6059
102 Ga0105238_10034999 3300009551 Bacteria 5108
103 Ga0105238_10218399 3300009551 Bacteria 1882
104 Ga0105238_10472606 3300009551 Bacteria 1252
105 Ga0105238_10619402 3300009551 Bacteria 1091
106 Ga0105249_10070887 3300009553 Bacteria 3218
107 Ga0105239_10011844 3300010375 Bacteria 9730
108 Ga0105239_10021629 3300010375 Bacteria 7092
109 Ga0105239_10023104 3300010375 Bacteria 6853
110 Ga0105239_10534940 3300010375 Bacteria 1334
111 Ga0105246_10138233 3300011119 Bacteria 1828
112 Ga0157369_10401839 3300013105 Bacteria 1421
113 Ga0157378_10010326 3300013297 Bacteria 8151
114 Ga0157378_10805646 3300013297 Bacteria 965
115 Ga0157372_10007073 3300013307 Bacteria 11957
116 Ga0157372_10198687 3300013307 Bacteria 2322
117 Ga0157372_10254038 3300013307 Bacteria 2041
118 Ga0157375_10000130 3300013308 Bacteria 74968
119 Ga0163163_10105320 3300014325 Bacteria 2846
120 Ga0163163_10172520 3300014325 Bacteria 2209
121 Ga0163163_10213886 3300014325 Unclassified 1977
122 Ga0157380_10134328 3300014326 Bacteria 2115
123 Ga0157376_10125066 3300014969 Bacteria 2285
124 Ga0157376_10261681 3300014969 Bacteria 1621
125 Ga0209566_100015 3300025225 Bacteria 457963
126 Ga0209258_101276 3300025242 Bacteria 9471
127 Ga0209025_1013475 3300025294 Bacteria 5132
128 Ga0209025_1036695 3300025294 Bacteria 2190
129 Ga0207684_10057931 3300025910 Bacteria 3287
130 Ga0207684_10116393 3300025910 Bacteria 2290
131 Ga0207684_10140405 3300025910 Bacteria 2076
132 Ga0207707_10007124 3300025912 Bacteria 9742
133 Ga0207695_10004208 3300025913 Bacteria 19770
134 Ga0207695_10191423 3300025913 Bacteria 1963
135 Ga0207695_10206698 3300025913 Unclassified 1876
136 Ga0207671_10024684 3300025914 Bacteria 4515
137 Ga0207646_10011430 3300025922 Bacteria 8603
138 Ga0207646_10229345 3300025922 Bacteria 1678
139 Ga0207694_10027978 3300025924 Bacteria 4297
140 Ga0207687_10035130 3300025927 Unclassified 3408
141 Ga0207700_10004177 3300025928 Bacteria 8479
142 Ga0207664_10018329 3300025929 Bacteria 5150
143 Ga0207644_10164306 3300025931 Bacteria 1728
144 Ga0207706_10163633 3300025933 Bacteria 1955
145 Ga0207704_10032446 3300025938 Unclassified 2956
146 Ga0207711_10013873 3300025941 Bacteria 6693
147 Ga0207661_10000016 3300025944 Bacteria 305159
148 Ga0207667_10039757 3300025949 Bacteria 5010
149 Ga0207667_10044399 3300025949 Bacteria 4710
150 Ga0207668_10194331 3300025972 Unclassified 1611
151 Ga0207658_10016868 3300025986 Bacteria 5026
152 Ga0207677_10377553 3300026023 Bacteria 1195
153 Ga0207703_10102656 3300026035 Bacteria 2426
154 Ga0207703_10179688 3300026035 Bacteria 1867
155 Ga0207639_10037519 3300026041 Bacteria 3600
156 Ga0207708_10065278 3300026075 Bacteria 2782
157 Ga0207702_10107060 3300026078 Bacteria 2478
158 Ga0207641_10036941 3300026088 Bacteria 4078
159 Ga0207648_10026912 3300026089 Bacteria 5108
160 Ga0207648_10084753 3300026089 Unclassified 2764
161 Ga0207648_10103544 3300026089 Bacteria 2496
162 Ga0207676_10223658 3300026095 Bacteria 1678
163 Ga0207674_10176389 3300026116 Bacteria 2089
164 Ga0268266_10091277 3300028379 Unclassified 2671
165 Ga0268266_10223049 3300028379 Bacteria 1734
166 Ga0268266_10378210 3300028379 Bacteria 1335
167 Ga0268265_10054752 3300028380 Bacteria 3029
168 Ga0268264_10018248 3300028381 Bacteria 5738
169 Ga0265323_10000200 3300028653 Bacteria 36094
170 Ga0265338_10055901 3300028800 Bacteria 3506
171 Ga0265324_10014501 3300029957 Bacteria 2914
172 Ga0265332_10067957 3300031238 Bacteria 1519
173 Ga0265320_10020484 3300031240 Bacteria 3584
174 Ga0265325_10028486 3300031241 Bacteria 3011
175 Ga0265329_10027082 3300031242 Bacteria 1886
176 Ga0265331_10009897 3300031250 Bacteria 5310
177 Ga0265331_10124727 3300031250 Bacteria 1177
178 Ga0265316_10006066 3300031344 Bacteria 11601
179 Ga0265316_10013625 3300031344 Bacteria 7215
180 Ga0265316_10038955 3300031344 Unclassified 3822
181 Ga0265316_10044267 3300031344 Bacteria 3541
182 Ga0265316_10141442 3300031344 Bacteria 1807
183 Ga0265316_10162652 3300031344 Bacteria 1668
184 Ga0265314_10001015 3300031711 Bacteria 32803
185 Ga0265314_10005971 3300031711 Bacteria 10861
186 Ga0265342_10027089 3300031712 Bacteria 3587
187 Ga0316576_10003555 3300031727 Bacteria 9169
188 Ga0316576_10005351 3300031727 Bacteria 7827
189 Ga0316576_10006312 3300031727 Bacteria 7366
190 Ga0316578_10045810 3300031728 Bacteria 2547
191 Ga0316578_10051369 3300031728 Bacteria 2414
192 Ga0307411_10149403 3300032005 Bacteria 1734
193 Ga0373956_0026992 3300035119 Bacteria 2490
194 Ga0373946_0073805 3300035171 Bacteria 1480
195 Ga0373927_0363829 3300035695 Bacteria 953
196 Ga0373937_0046241 3300036401 Bacteria 3979
197 Ga0373937_0792830 3300036401 Bacteria 895
198 Ga0316582_0019890 3300036647 Bacteria 3938
199 Ga0373925_0006456 3300037068 Bacteria 8626
200 Ga0373925_0068230 3300037068 Bacteria 2684
201 Ga0373925_0103797 3300037068 Bacteria 2188
202 Ga0373925_0186861 3300037068 Unclassified 1643
203 Ga0395905_0040950 3300037471 Bacteria 4346
204 Ga0436361_1004699 3300039447 Eukaryota 874
205 Ga0451577_0036342 3300042876 Bacteria 4433
206 Ga0451577_0610684 3300042876 Bacteria 990
207 Ga0453684_0005563 3300044712 Bacteria 24856
208 Ga0453684_0042592 3300044712 Bacteria 6119
209 Ga0451576_0600047 3300045051 Bacteria 1157
210 Ga0495592_0013087 3300046454 Bacteria 6313
211 Ga0495592_0060662 3300046454 Bacteria 2781
212 Ga0495638_0012972 3300046460 Bacteria 5690
213 Ga0495651_0002798 3300046462 Bacteria 13523
214 Ga0495651_0070467 3300046462 Bacteria 2660
215 Ga0495651_0103809 3300046462 Bacteria 2111
216 Ga0495653_0002320 3300046463 Bacteria 15090
217 Ga0495653_0052573 3300046463 Bacteria 3122
218 Ga0495580_0000579 3300046472 Bacteria 30897
219 Ga0495580_0036049 3300046472 Bacteria 3554
220 Ga0495580_0079988 3300046472 Bacteria 2279
221 Ga0495664_0009330 3300046477 Bacteria 5488
222 Ga0495664_0110537 3300046477 Bacteria 1659
223 Ga0495584_0200332 3300046491 Bacteria 1015
224 Ga0495608_0001185 3300046511 Bacteria 18505
225 Ga0495618_0025804 3300046514 Bacteria 3650
226 Ga0495618_0113288 3300046514 Bacteria 1737
227 Ga0495628_0009279 3300046516 Bacteria 8407
228 Ga0495630_0087379 3300046517 Bacteria 2354
229 Ga0495630_0178296 3300046517 Bacteria 1620
230 Ga0495652_0026536 3300046529 Bacteria 5116
231 Ga0495652_0088138 3300046529 Bacteria 2544
232 Ga0495652_0283415 3300046529 Bacteria 1212
233 Ga0495665_0071939 3300046531 Bacteria 1821
234 Ga0495665_0149951 3300046531 Bacteria 1217
235 Ga0495640_0034013 3300046533 Bacteria 3619
236 Ga0495640_0051999 3300046533 Bacteria 2814
237 Ga0495587_0004715 3300046536 Bacteria 8946
238 Ga0495587_0054211 3300046536 Bacteria 2363
239 Ga0495587_0070663 3300046536 Bacteria 2032
240 Ga0495645_0002688 3300046543 Bacteria 12064
241 Ga0495667_0000947 3300046559 Bacteria 18764
242 Ga0495667_0056440 3300046559 Bacteria 2582
243 Ga0495635_0013564 3300046663 Bacteria 5702
244 Ga0495635_0096169 3300046663 Bacteria 2024
245 Ga0495635_0313398 3300046663 Bacteria 1051
246 Ga0495657_0080660 3300046675 Bacteria 2106
247 Ga0495599_0060239 3300046678 Bacteria 2373
248 Ga0495623_0028225 3300046679 Bacteria 3611
249 Ga0495623_0033478 3300046679 Bacteria 3297
250 Ga0495623_0039003 3300046679 Bacteria 3037
251 Ga0495623_0068103 3300046679 Bacteria 2221
252 Ga0495646_0031883 3300046680 Bacteria 3282
253 Ga0495613_0046587 3300046689 Bacteria 3206
254 Ga0495613_0116834 3300046689 Bacteria 1918
255 Ga0495624_0141059 3300046690 Bacteria 1476
256 Ga0495600_0076130 3300046809 Bacteria 2191
257 Ga0495674_0000857 3300047319 Bacteria 29025
258 Ga0495674_0017493 3300047319 Bacteria 6671
259 Ga0495674_0111050 3300047319 Bacteria 2324
260 Ga0495674_0203251 3300047319 Bacteria 1643
261 Ga0495674_0241860 3300047319 Bacteria 1487
262 Ga0495674_0265131 3300047319 Bacteria 1410
263 Ga0495680_0003508 3300047322 Bacteria 15385
264 Ga0495675_0010990 3300047444 Bacteria 5675
265 Ga0495675_0146421 3300047444 Unclassified 1461
266 Ga0495684_0001648 3300047471 Bacteria 17929
267 Ga0495602_0027261 3300048088 Bacteria 5493
268 Ga0495602_0043288 3300048088 Bacteria 4096
269 Ga0496104_0001895 3300048907 Bacteria 18118
270 Ga0496112_0313474 3300048915 Bacteria 1514
271 Ga0496112_0320681 3300048915 Unclassified 1494
272 Ga0496115_0102357 3300048918 Bacteria 2349
273 Ga0501031_0004298 3300049568 Bacteria 9216
274 Ga0501032_0000350 3300049569 Bacteria 38526
275 Ga0501033_0101717 3300049570 Archaea 2096
276 Ga0501036_0011027 3300049572 Bacteria 7476
277 Ga0501037_0023017 3300049573 Archaea 4607
278 Ga0501038_0006384 3300049574 Bacteria 10916
279 Ga0501039_0014353 3300049575 Bacteria 6065
280 Ga0501043_0007994 3300049579 Bacteria 8349
281 Ga0501046_0010941 3300049580 Archaea 7779
282 Ga0501048_0397236 3300049582 Bacteria 985
283 Ga0501068_0000592 3300049584 Bacteria 18422
284 Ga0501071_0267156 3300049587 Bacteria 1293
285 Ga0501072_0002626 3300049588 Bacteria 13471
286 Ga0501073_0024742 3300049589 Bacteria 4310
287 Ga0501075_0144313 3300049591 Bacteria 1814
288 Ga0501076_0009002 3300049592 Bacteria 7352
289 Ga0501076_0083929 3300049592 Bacteria 2559
290 Ga0501077_0004365 3300049593 Archaea 8578
291 Ga0501079_0002674 3300049741 Bacteria 12956
292 Ga0501080_0001674 3300049742 Bacteria 18878
293 Ga0501080_0022476 3300049742 Bacteria 5842
294 Ga0501081_0099955 3300049743 Bacteria 2050
295 Ga0501081_0154831 3300049743 Bacteria 1648
296 Ga0501044_0062297 3300049823 Archaea 3812
297 Ga0501045_0097618 3300049824 Archaea 2174
298 nmdc:mga05p37_217356_c1 3300050507 Bacteria 2308
299 nmdc:mga05p37_283518_c1 3300050507 Bacteria 1975
300 nmdc:mga05p37_67850_c1 3300050507 Bacteria 4387
301 nmdc:mga09592_3173_c1 3300050508 Bacteria 13353
302 nmdc:mga0qj67_59611_c1 3300050509 Bacteria 3027
303 nmdc:mga06r32_302120_c1 3300050510 Bacteria 1586
304 nmdc:mga06r32_421137_c1 3300050510 Bacteria 1316
305 nmdc:mga06r32_7185_c1 3300050510 Bacteria 10036
306 nmdc:mga08y16_447293_c1 3300050511 Bacteria 1318
307 nmdc:mga0n895_22159_c1 3300050512 Bacteria 5954
308 nmdc:mga0a205_63301_c1 3300050515 Bacteria 3574
309 Ga0500568_0001006 3300053139 Bacteria 19309
310 Ga0500568_0007261 3300053139 Bacteria 5457
311 Ga0501084_0126633 3300054114 Archaea 2149
312 Ga0501082_0002283 3300060353 Bacteria 16783
313 Ga0501082_0234903 3300060353 Bacteria 1596
314 8057733559 8057733483 Bacteria 6578323
315 Ga0265342_10039694
316 MBSR1b_contig_982398
317 JGI25151J46595_10048100
318 JGI25151J46595_10048103
319 Ga0055535_1001374
320 Ga0070683_100000011
321 Ga0068869_100013258
322 Ga0068868_100266687
323 Ga0068868_100298978
324 Ga0070671_100117580
325 Ga0070667_100024478
326 Ga0070713_100001053
327 Ga0070701_10104299
328 Ga0070694_100002380
329 Ga0070694_100098359
330 Ga0070708_100048110
331 Ga0070708_100185582
332 Ga0070678_100585037
333 Ga0070662_100152025
334 Ga0070681_10009245
335 Ga0068867_100164344
336 Ga0068867_100588839
337 Ga0070706_100052690
338 Ga0070706_100123339
339 Ga0070707_100106282
340 Ga0070698_100005400
341 Ga0070698_100183860
342 Ga0070699_100003067
343 Ga0070699_100179992
344 Ga0070679_100403410
345 Ga0070684_100000001
346 Ga0070684_100011460
347 Ga0070684_100024509
348 Ga0070684_100138438
349 Ga0070697_100064288
350 Ga0070697_100202165
351 Ga0068853_100113712
352 Ga0070672_100388258
353 Ga0070686_100051791
354 Ga0070695_100012807
355 Ga0070665_100271596
356 Ga0070665_100376478
357 Ga0070704_100075223
358 Ga0070704_100171152
359 Ga0068855_100012096
360 Ga0068855_100054809
361 Ga0068855_100092788
362 Ga0070664_100026089
363 Ga0068857_100003592
364 Ga0068854_100138620
365 Ga0068859_100038207
366 Ga0068866_10105640
367 Ga0068866_10205670
368 Ga0068863_100054231
369 Ga0068858_100482057
370 Ga0068860_100029359
371 Ga0068860_100147530
372 Ga0068862_100041315
373 Ga0081539_10004209
374 Ga0070717_10008082
375 Ga0070717_10160031
376 Ga0075363_100214950
377 Ga0070716_100103116
378 Ga0097621_100138947
379 Ga0097621_100332474
380 Ga0068871_100005459
381 Ga0068871_100076862
382 Ga0068871_100254081
383 Ga0075428_100064797
384 Ga0075430_100037484
385 Ga0075431_100040510
386 Ga0075431_100140980
387 Ga0075429_100000873
388 Ga0068865_100003881
389 Ga0097620_100038208
390 Ga0105240_10058492
391 Ga0105240_10174125
392 Ga0105240_10195798
393 Ga0105240_10859541
394 Ga0111539_10066727
395 Ga0105245_10006803
396 Ga0105245_10172193
397 Ga0114129_10056445
398 Ga0114129_10073867
399 Ga0114129_10090017
400 Ga0114129_10306826
401 Ga0114129_10436211
402 Ga0105243_10046132
403 Ga0105241_10007248
404 Ga0105241_10169324
405 Ga0105241_10291833
406 Ga0105242_10005738
407 Ga0105242_10040076
408 Ga0105248_10090233
409 Ga0105248_10224698
410 Ga0105248_10659139
411 Ga0105248_10917594
412 Ga0105237_10025402
413 Ga0105237_10042912
414 Ga0105238_10007522
415 Ga0105238_10025223
416 Ga0105238_10034999
417 Ga0105238_10218399
418 Ga0105238_10472606
419 Ga0105238_10619402
420 Ga0105249_10070887
421 Ga0105239_10011844
422 Ga0105239_10021629
423 Ga0105239_10023104
424 Ga0105239_10534940
425 Ga0105246_10138233
426 Ga0157369_10401839
427 Ga0157378_10010326
428 Ga0157378_10805646
429 Ga0157372_10007073
430 Ga0157372_10198687
431 Ga0157372_10254038
432 Ga0157375_10000130
433 Ga0163163_10105320
434 Ga0163163_10172520
435 Ga0163163_10213886
436 Ga0157380_10134328
437 Ga0157376_10125066
438 Ga0157376_10261681
439 Ga0209566_100015
440 Ga0209258_101276
441 Ga0209025_1013475
442 Ga0209025_1036695
443 Ga0207684_10057931
444 Ga0207684_10116393
445 Ga0207684_10140405
446 Ga0207707_10007124
447 Ga0207695_10004208
448 Ga0207695_10191423
449 Ga0207695_10206698
450 Ga0207671_10024684
451 Ga0207646_10011430
452 Ga0207646_10229345
453 Ga0207694_10027978
454 Ga0207687_10035130
455 Ga0207700_10004177
456 Ga0207664_10018329
457 Ga0207644_10164306
458 Ga0207706_10163633
459 Ga0207704_10032446
460 Ga0207711_10013873
461 Ga0207661_10000016
462 Ga0207667_10039757
463 Ga0207667_10044399
464 Ga0207668_10194331
465 Ga0207658_10016868
466 Ga0207677_10377553
467 Ga0207703_10102656
468 Ga0207703_10179688
469 Ga0207639_10037519
470 Ga0207708_10065278
471 Ga0207702_10107060
472 Ga0207641_10036941
473 Ga0207648_10026912
474 Ga0207648_10084753
475 Ga0207648_10103544
476 Ga0207676_10223658
477 Ga0207674_10176389
478 Ga0268266_10091277
479 Ga0268266_10223049
480 Ga0268266_10378210
481 Ga0268265_10054752
482 Ga0268264_10018248
483 Ga0265323_10000200
484 Ga0265338_10055901
485 Ga0265324_10014501
486 Ga0265332_10067957
487 Ga0265320_10020484
488 Ga0265325_10028486
489 Ga0265329_10027082
490 Ga0265331_10009897
491 Ga0265331_10124727
492 Ga0265316_10006066
493 Ga0265316_10013625
494 Ga0265316_10038955
495 Ga0265316_10044267
496 Ga0265316_10141442
497 Ga0265316_10162652
498 Ga0265314_10001015
499 Ga0265314_10005971
500 Ga0265342_10027089
501 Ga0316576_10003555
502 Ga0316576_10005351
503 Ga0316576_10006312
504 Ga0316578_10045810
505 Ga0316578_10051369
506 Ga0307411_10149403
507 Ga0373956_0026992
508 Ga0373946_0073805
509 Ga0373927_0363829
510 Ga0373937_0046241
511 Ga0373937_0792830
512 Ga0316582_0019890
513 Ga0373925_0006456
514 Ga0373925_0068230
515 Ga0373925_0103797
516 Ga0373925_0186861
517 Ga0395905_0040950
518 Ga0436361_1004699
519 Ga0451577_0036342
520 Ga0451577_0610684
521 Ga0453684_0005563
522 Ga0453684_0042592
523 Ga0451576_0600047
524 Ga0495592_0013087
525 Ga0495592_0060662
526 Ga0495638_0012972
527 Ga0495651_0002798
528 Ga0495651_0070467
529 Ga0495651_0103809
530 Ga0495653_0002320
531 Ga0495653_0052573
532 Ga0495580_0000579
533 Ga0495580_0036049
534 Ga0495580_0079988
535 Ga0495664_0009330
536 Ga0495664_0110537
537 Ga0495584_0200332
538 Ga0495608_0001185
539 Ga0495618_0025804
540 Ga0495618_0113288
541 Ga0495628_0009279
542 Ga0495630_0087379
543 Ga0495630_0178296
544 Ga0495652_0026536
545 Ga0495652_0088138
546 Ga0495652_0283415
547 Ga0495665_0071939
548 Ga0495665_0149951
549 Ga0495640_0034013
550 Ga0495640_0051999
551 Ga0495587_0004715
552 Ga0495587_0054211
553 Ga0495587_0070663
554 Ga0495645_0002688
555 Ga0495667_0000947
556 Ga0495667_0056440
557 Ga0495635_0013564
558 Ga0495635_0096169
559 Ga0495635_0313398
560 Ga0495657_0080660
561 Ga0495599_0060239
562 Ga0495623_0028225
563 Ga0495623_0033478
564 Ga0495623_0039003
565 Ga0495623_0068103
566 Ga0495646_0031883
567 Ga0495613_0046587
568 Ga0495613_0116834
569 Ga0495624_0141059
570 Ga0495600_0076130
571 Ga0495674_0000857
572 Ga0495674_0017493
573 Ga0495674_0111050
574 Ga0495674_0203251
575 Ga0495674_0241860
576 Ga0495674_0265131
577 Ga0495680_0003508
578 Ga0495675_0010990
579 Ga0495675_0146421
580 Ga0495684_0001648
581 Ga0495602_0027261
582 Ga0495602_0043288
583 Ga0496104_0001895
584 Ga0496112_0313474
585 Ga0496112_0320681
586 Ga0496115_0102357
587 Ga0501031_0004298
588 Ga0501032_0000350
589 Ga0501033_0101717
590 Ga0501036_0011027
591 Ga0501037_0023017
592 Ga0501038_0006384
593 Ga0501039_0014353
594 Ga0501043_0007994
595 Ga0501046_0010941
596 Ga0501048_0397236
597 Ga0501068_0000592
598 Ga0501071_0267156
599 Ga0501072_0002626
600 Ga0501073_0024742
601 Ga0501075_0144313
602 Ga0501076_0009002
603 Ga0501076_0083929
604 Ga0501077_0004365
605 Ga0501079_0002674
606 Ga0501080_0001674
607 Ga0501080_0022476
608 Ga0501081_0099955
609 Ga0501081_0154831
610 Ga0501044_0062297
611 Ga0501045_0097618
612 nmdc:mga05p37_217356_c1
613 nmdc:mga05p37_283518_c1
614 nmdc:mga05p37_67850_c1
615 nmdc:mga09592_3173_c1
616 nmdc:mga0qj67_59611_c1
617 nmdc:mga06r32_302120_c1
618 nmdc:mga06r32_421137_c1
619 nmdc:mga06r32_7185_c1
620 nmdc:mga08y16_447293_c1
621 nmdc:mga0n895_22159_c1
622 nmdc:mga0a205_63301_c1
623 Ga0500568_0001006
624 Ga0500568_0007261
625 Ga0501084_0126633
626 Ga0501082_0002283
627 Ga0501082_0234903
628 8057733559

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00763

THF_DHG_CYH

Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

28

142

0.99

PF02882

THF_DHG_CYH_C

Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

145

326

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6de8-assembly1.cif.gz_A crystal structure of bifunctional enzyme fold-methylenetetrahydrofolate dehydrogenase/cyclohydrolase from campylobacter jejuni 0.9776 3 303
6v6y-assembly1.cif.gz_A-2 crystal structure of t. thermophilus methylenetetrahydrofolate dehydrogenase (mthfd) 0.9716 1 304
6v6y-assembly1.cif.gz_A-2 crystal structure of t. thermophilus methylenetetrahydrofolate dehydrogenase (mthfd) 0.9682 1 304
6de8-assembly1.cif.gz_A crystal structure of bifunctional enzyme fold-methylenetetrahydrofolate dehydrogenase/cyclohydrolase from campylobacter jejuni 0.9674 3 303
6ape-assembly1.cif.gz_A crystal structure of bifunctional protein fold from helicobacter pylori 0.9644 3 306
ID Description Score Start End Superfamily
af_Q0E4G1_111_191_3.40.50.10860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.9941 33 113 3.40.50.10860
af_A0A0R0F3H3_60_174_3.40.50.10860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.9853 13 124 3.40.50.10860
3l07A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.9843 31 114 3.40.50.10860
4cjxA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.9825 29 114 3.40.50.10860
af_Q0E4G1_111_191_3.40.50.10860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.982 33 113 3.40.50.10860
ID Description Score Start End GO Terms
AF-A0A2D5ALZ8-F1-model_v4 Bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase 0.9963 8 113 GO:0004477
GO:0004488
GO:0005829
GO:0006164
GO:0009086
GO:0035999
AF-A0A2S8LSJ0-F1-model_v4 deleted 0.9935 39 121
AF-A0A833NLB1-F1-model_v4 deleted 0.9933 95 232
AF-A0A0K9QTG7-F1-model_v4 deleted 0.9923 140 211
AF-A0A353C7M6-F1-model_v4 Bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase 0.9922 1 177 GO:0004477
GO:0004488
GO:0005829
GO:0006164
GO:0009086
GO:0035999

Map