F402674

General Info

Members Datasets Scaffolds Average Seq Length
314 180 300 231

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10870265|Ga0105238_108702651
Length 248
Sequence VVGAAAGHGRHALTAALVVAKTLAELAADGSMDPGWAQALAPVADRIAGMGDFLRAEVAAGRPYLPAGENVLRAFRAPYSEVRVLIVGQDPYPTPGHPIGLSFAVERHVRPIPRSLQHIYRELRDDLGVTPPPHGDLSAWATHGVMLLNRVLTVRPGAPASHRGKGWEAVTEHAIRALVARGRPFVSILWGRDAATLKPLLGGNPVIESAHPSPLSASRGFFGSRPFSRANALLEHAGEKPVDWSLEP

Samples

Sample ID Description Type Environment
1 2643221616 Leifsonia sp. Root227 Isolate Unclassified
2 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
3 2808606372 Agromyces sp. 23-23 Isolate Unclassified
4 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
5 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
6 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
7 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
8 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
9 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
10 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
11 2928153084 Leifsonia sp. 563 Isolate Unclassified
12 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
13 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
14 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
15 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
16 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
17 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
18 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
19 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
20 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
21 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
22 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
23 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
24 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
25 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
26 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
27 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
30 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
31 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
32 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
104 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
105 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
106 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
107 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
108 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
109 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
110 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
111 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
112 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
113 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
114 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
115 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
119 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
122 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
127 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
135 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
139 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
140 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
141 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
142 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
147 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
166 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
172 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
173 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
174 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
175 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
176 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
177 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
178 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
179 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
180 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.59
Metatranscriptomes 0.96
Isolates 4.46

Biome Distribution

Category Percentage (%)
Aerial Root 0.64
Bulb 0
Endosphere 11.78
Nodule 0
Rhizoplane 9.24
Rhizosphere 70.06
Stem 0
Stem Tuber 0.32
Unclassified 7.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10008481 3300002067 Bacteria 3321
2 JGI25164J39214_1002430 3300002772 Bacteria 2872
3 JGI25165J46597_1000044 3300003214 Bacteria 263289
4 Ga0006562J51391_1014374 3300003578 Bacteria 18050
5 Ga0006562J51391_1014380 3300003578 Bacteria 3890
6 Ga0055539_1000027 3300003752 Bacteria 258020
7 Ga0055533_1000020 3300003756 Bacteria 353998
8 Ga0055525_1000296 3300003759 Bacteria 43199
9 Ga0055527_1000005 3300003760 Bacteria 504776
10 Ga0055542_1000006 3300003762 Bacteria 504776
11 Ga0055542_1005441 3300003762 Bacteria 2879
12 Ga0055529_1000013 3300003763 Bacteria 373267
13 Ga0055541_1005885 3300003841 Bacteria 2117
14 Ga0070658_10701829 3300005327 Bacteria 878
15 Ga0070683_100238545 3300005329 Bacteria 1729
16 Ga0068869_100252282 3300005334 Bacteria 1409
17 Ga0070660_100712576 3300005339 Bacteria 842
18 Ga0070661_100241027 3300005344 Bacteria 1392
19 Ga0070688_100372815 3300005365 Bacteria 1050
20 Ga0070667_100004494 3300005367 Bacteria 11768
21 Ga0070710_10014256 3300005437 Bacteria 3998
22 Ga0070663_100766675 3300005455 Bacteria 825
23 Ga0070678_100052008 3300005456 Bacteria 2972
24 Ga0070678_100287039 3300005456 Bacteria 1394
25 Ga0068855_100069869 3300005563 Bacteria 4086
26 Ga0068855_100206156 3300005563 Bacteria 2212
27 Ga0068855_100215529 3300005563 Bacteria 2155
28 Ga0068855_100444741 3300005563 Bacteria 1415
29 Ga0068857_100000330 3300005577 Bacteria 32633
30 Ga0068857_100396172 3300005577 Bacteria 1284
31 Ga0068854_100062743 3300005578 Bacteria 2696
32 Ga0068856_100167394 3300005614 Bacteria 2209
33 Ga0068856_100354188 3300005614 Bacteria 1486
34 Ga0068856_100435386 3300005614 Bacteria 1331
35 Ga0068856_100443617 3300005614 Bacteria 1318
36 Ga0068852_100005410 3300005616 Bacteria 9135
37 Ga0068852_100005500 3300005616 Bacteria 9074
38 Ga0068864_100413341 3300005618 Bacteria 1284
39 Ga0068851_10000005 3300005834 Bacteria 262808
40 Ga0068863_100139819 3300005841 Bacteria 2314
41 Ga0068858_100002205 3300005842 Bacteria 19723
42 Ga0068862_100046777 3300005844 Bacteria 3691
43 Ga0105240_10005269 3300009093 Bacteria 19311
44 Ga0105240_10291007 3300009093 Bacteria 1872
45 Ga0105240_10783840 3300009093 Bacteria 1034
46 Ga0105245_10034984 3300009098 Bacteria 4457
47 Ga0105245_10058883 3300009098 Bacteria 3458
48 Ga0105245_10102723 3300009098 Bacteria 2647
49 Ga0105245_10985757 3300009098 Bacteria 887
50 Ga0105241_10007427 3300009174 Bacteria 8068
51 Ga0105241_10194488 3300009174 Bacteria 1690
52 Ga0105237_10028916 3300009545 Bacteria 5641
53 Ga0105237_10097794 3300009545 Bacteria 2926
54 Ga0105237_10561707 3300009545 Bacteria 1148
55 Ga0105238_10139950 3300009551 Bacteria 2397
56 Ga0105238_10536951 3300009551 Bacteria 1173
57 Ga0105238_10870265 3300009551 Bacteria 919
58 Ga0105239_10144555 3300010375 Bacteria 2652
59 Ga0105239_10222910 3300010375 Bacteria 2115
60 Ga0105239_10299847 3300010375 Bacteria 1810
61 Ga0105239_10534281 3300010375 Bacteria 1335
62 Ga0157369_10000103 3300013105 Bacteria 118273
63 Ga0157369_10258307 3300013105 Bacteria 1817
64 Ga0157369_10332451 3300013105 Bacteria 1579
65 Ga0157374_10064534 3300013296 Bacteria 3436
66 Ga0157375_10536238 3300013308 Bacteria 1333
67 Ga0163163_11347004 3300014325 Bacteria 775
68 Ga0157379_10000995 3300014968 Bacteria 22979
69 Ga0157376_10114688 3300014969 Bacteria 2378
70 Ga0206353_10373074 3300020082 Bacteria 19601
71 Ga0209566_100043 3300025225 Bacteria 266609
72 Ga0209674_100001 3300025226 Bacteria 4013750
73 Ga0209672_100003 3300025228 Bacteria 1560476
74 Ga0209563_100001 3300025230 Bacteria 4013775
75 Ga0209563_100497 3300025230 Bacteria 13325
76 Ga0207427_100126 3300025231 Bacteria 95170
77 Ga0209437_101068 3300025233 Bacteria 8913
78 Ga0209677_100001 3300025253 Bacteria 4013787
79 Ga0209677_100508 3300025253 Bacteria 21770
80 Ga0209148_1000004 3300025254 Bacteria 1844481
81 Ga0209148_1000401 3300025254 Bacteria 50504
82 Ga0209233_1000014 3300025261 Bacteria 996641
83 Ga0209455_1000046 3300025272 Bacteria 382681
84 Ga0209455_1001325 3300025272 Bacteria 11451
85 Ga0207656_10000001 3300025321 Bacteria 1323684
86 Ga0207656_10000003 3300025321 Bacteria 771644
87 Ga0207656_10000004 3300025321 Bacteria 632320
88 Ga0207688_10326002 3300025901 Bacteria 943
89 Ga0207647_10111611 3300025904 Bacteria 1616
90 Ga0207647_10161911 3300025904 Bacteria 1305
91 Ga0207705_10007466 3300025909 Bacteria 8039
92 Ga0207654_10000003 3300025911 Bacteria 1030378
93 Ga0207695_10005147 3300025913 Bacteria 17513
94 Ga0207695_10011318 3300025913 Bacteria 10815
95 Ga0207695_10148912 3300025913 Bacteria 2281
96 Ga0207671_10000001 3300025914 Bacteria 1318881
97 Ga0207681_10048008 3300025923 Bacteria 2880
98 Ga0207694_10000066 3300025924 Bacteria 128281
99 Ga0207694_10378711 3300025924 Bacteria 1174
100 Ga0207659_10004997 3300025926 Bacteria 8036
101 Ga0207687_10045408 3300025927 Bacteria 3036
102 Ga0207687_10048347 3300025927 Bacteria 2953
103 Ga0207706_10022358 3300025933 Bacteria 5674
104 Ga0207711_10017812 3300025941 Bacteria 5902
105 Ga0207661_10008115 3300025944 Bacteria 7491
106 Ga0207679_10003679 3300025945 Bacteria 9501
107 Ga0207667_10008774 3300025949 Bacteria 11972
108 Ga0207667_10239099 3300025949 Bacteria 1859
109 Ga0207667_10481308 3300025949 Bacteria 1260
110 Ga0207640_10080160 3300025981 Bacteria 2227
111 Ga0207640_10244876 3300025981 Bacteria 1388
112 Ga0207658_10006151 3300025986 Bacteria 8195
113 Ga0207677_10016007 3300026023 Bacteria 4428
114 Ga0207703_10000026 3300026035 Bacteria 211591
115 Ga0207703_10172718 3300026035 Bacteria 1902
116 Ga0207678_10042617 3300026067 Bacteria 3930
117 Ga0207678_10362667 3300026067 Bacteria 1251
118 Ga0207708_10020697 3300026075 Bacteria 4962
119 Ga0207702_10044178 3300026078 Bacteria 3744
120 Ga0207641_10044956 3300026088 Bacteria 3716
121 Ga0207676_10217934 3300026095 Bacteria 1698
122 Ga0207674_10011170 3300026116 Bacteria 10098
123 Ga0207674_10032536 3300026116 Bacteria 5470
124 Ga0207674_10046207 3300026116 Bacteria 4472
125 Ga0207675_100042192 3300026118 Bacteria 4258
126 Ga0207683_10037467 3300026121 Bacteria 4223
127 Ga0207683_10075428 3300026121 Bacteria 2985
128 Ga0207683_10157026 3300026121 Bacteria 2055
129 Ga0207698_10000243 3300026142 Bacteria 33530
130 Ga0207698_10001959 3300026142 Bacteria 12098
131 Ga0207698_10054314 3300026142 Bacteria 3082
132 Ga0207698_10453402 3300026142 Bacteria 1238
133 Ga0307514_10025652 3300031649 Bacteria 4769
134 Ga0307514_10045186 3300031649 Bacteria 3447
135 Ga0307413_10142658 3300031824 Bacteria 1657
136 Ga0395899_0009371 3300037312 Bacteria 7519
137 Ga0395899_0121701 3300037312 Bacteria 1868
138 Ga0395900_0006920 3300037418 Bacteria 11766
139 Ga0395900_0023085 3300037418 Bacteria 6366
140 Ga0395898_0000098 3300037466 Bacteria 229806
141 Ga0395901_0142352 3300038443 Bacteria 2520
142 Ga0395901_0257767 3300038443 Bacteria 1816
143 Ga0451787_245081 3300041441 Bacteria 868
144 Ga0451789_0853087 3300041443 Bacteria 773
145 Ga0451791_0707738 3300041451 Bacteria 1618
146 Ga0451793_0557285 3300041452 Bacteria 850
147 Ga0451793_1220119 3300041452 Bacteria 2129
148 Ga0451837_0536650 3300041494 Bacteria 1627
149 Ga0451843_1400394 3300041509 Bacteria 1352
150 Ga0451853_0603757 3300041512 Bacteria 2161
151 Ga0466965_0000012 3300044683 Bacteria 100611
152 Ga0466966_0052669 3300044684 Bacteria 2584
153 Ga0466963_0012098 3300044694 Bacteria 5273
154 Ga0466964_0222375 3300044706 Bacteria 917
155 Ga0466971_0039284 3300044719 Bacteria 2124
156 Ga0466968_0031411 3300044735 Bacteria 2203
157 Ga0466970_0021011 3300044765 Bacteria 3398
158 Ga0466970_0026883 3300044765 Bacteria 3016
159 Ga0466970_0083134 3300044765 Bacteria 1732
160 Ga0466957_0297788 3300044842 Bacteria 1083
161 Ga0466960_0039947 3300044901 Bacteria 2216
162 Ga0466960_0043317 3300044901 Bacteria 2140
163 Ga0466959_0164282 3300045049 Bacteria 1559
164 Ga0466967_0077794 3300045976 Bacteria 2987
165 Ga0466967_0789942 3300045976 Bacteria 942
166 Ga0495650_0000757 3300046471 Bacteria 40371
167 Ga0495662_0068535 3300046476 Bacteria 1718
168 Ga0495635_0114162 3300046663 Bacteria 1844
169 Ga0495588_0244726 3300046674 Bacteria 946
170 Ga0495600_0371888 3300046809 Bacteria 893
171 Ga0495674_0657297 3300047319 Bacteria 826
172 Ga0496100_0397762 3300048903 Bacteria 1049
173 Ga0496100_0440007 3300048903 Bacteria 998
174 Ga0496102_0000881 3300048905 Bacteria 28610
175 Ga0496102_0004816 3300048905 Bacteria 11411
176 Ga0496102_0165741 3300048905 Bacteria 2079
177 Ga0496103_0061367 3300048906 Bacteria 2338
178 Ga0496104_0004287 3300048907 Bacteria 12403
179 Ga0496105_0010274 3300048908 Bacteria 7360
180 Ga0496105_0324183 3300048908 Bacteria 1234
181 Ga0496108_0006223 3300048911 Bacteria 9663
182 Ga0496108_0413708 3300048911 Bacteria 1178
183 Ga0496109_0000639 3300048912 Bacteria 29179
184 Ga0496109_0020957 3300048912 Bacteria 5778
185 Ga0496110_0018694 3300048913 Bacteria 5813
186 Ga0496111_0000328 3300048914 Bacteria 23607
187 Ga0496111_0646256 3300048914 Bacteria 772
188 Ga0496112_0076785 3300048915 Bacteria 3304
189 Ga0496114_0037779 3300048917 Bacteria 3995
190 Ga0496114_0055091 3300048917 Bacteria 3316
191 Ga0496114_0103033 3300048917 Bacteria 2439
192 Ga0496114_0135534 3300048917 Bacteria 2129
193 Ga0496114_0350374 3300048917 Bacteria 1306
194 Ga0496115_0108127 3300048918 Bacteria 2283
195 Ga0496115_0151932 3300048918 Bacteria 1912
196 Ga0496117_0019539 3300048920 Bacteria 5560
197 Ga0496118_0001331 3300048921 Bacteria 37503
198 Ga0496118_0003500 3300048921 Bacteria 19693
199 Ga0496118_0201870 3300048921 Bacteria 1177
200 Ga0496119_0001492 3300048922 Bacteria 28020
201 Ga0496119_0070948 3300048922 Bacteria 2041
202 Ga0496120_0000617 3300048923 Bacteria 53694
203 Ga0496120_0017300 3300048923 Bacteria 4681
204 Ga0496122_0072057 3300048925 Bacteria 2458
205 Ga0496123_0011537 3300048926 Bacteria 7647
206 Ga0496124_0000037 3300048927 Bacteria 317430
207 Ga0496126_0421479 3300048929 Bacteria 1079
208 Ga0501031_0166691 3300049568 Bacteria 1440
209 Ga0501032_0030755 3300049569 Bacteria 3684
210 Ga0501032_0055523 3300049569 Bacteria 2664
211 Ga0501032_0208327 3300049569 Bacteria 1275
212 Ga0501033_0002749 3300049570 Bacteria 14753
213 Ga0501033_0008436 3300049570 Bacteria 7980
214 Ga0501033_0013534 3300049570 Bacteria 6210
215 Ga0501033_0016961 3300049570 Bacteria 5504
216 Ga0501033_0104137 3300049570 Bacteria 2069
217 Ga0501033_0209471 3300049570 Bacteria 1390
218 Ga0501033_0226629 3300049570 Bacteria 1329
219 Ga0501034_0007316 3300049571 Bacteria 11765
220 Ga0501034_0037543 3300049571 Bacteria 4905
221 Ga0501034_0061461 3300049571 Bacteria 3772
222 Ga0501034_0066978 3300049571 Bacteria 3604
223 Ga0501034_0071358 3300049571 Bacteria 3482
224 Ga0501034_0103919 3300049571 Bacteria 2834
225 Ga0501034_0255919 3300049571 Bacteria 1694
226 Ga0501034_0342300 3300049571 Bacteria 1425
227 Ga0501036_0007703 3300049572 Bacteria 8796
228 Ga0501036_0060066 3300049572 Bacteria 3220
229 Ga0501036_0131830 3300049572 Bacteria 2110
230 Ga0501037_0010089 3300049573 Bacteria 6929
231 Ga0501037_0030172 3300049573 Bacteria 4006
232 Ga0501037_0051042 3300049573 Bacteria 3025
233 Ga0501037_0470463 3300049573 Bacteria 855
234 Ga0501038_0002168 3300049574 Bacteria 18244
235 Ga0501038_0008790 3300049574 Bacteria 9263
236 Ga0501038_0028821 3300049574 Bacteria 4928
237 Ga0501038_0091380 3300049574 Bacteria 2550
238 Ga0501038_0172065 3300049574 Bacteria 1752
239 Ga0501038_0357104 3300049574 Bacteria 1137
240 Ga0501039_0008389 3300049575 Bacteria 7874
241 Ga0501039_0008664 3300049575 Bacteria 7749
242 Ga0501039_0233401 3300049575 Bacteria 1446
243 Ga0501039_0318342 3300049575 Bacteria 1223
244 Ga0501042_0017801 3300049578 Bacteria 4907
245 Ga0501042_0076854 3300049578 Bacteria 2390
246 Ga0501042_0142472 3300049578 Bacteria 1728
247 Ga0501043_0018427 3300049579 Bacteria 5475
248 Ga0501043_0024007 3300049579 Bacteria 4784
249 Ga0501043_0029016 3300049579 Bacteria 4344
250 Ga0501043_0040157 3300049579 Bacteria 3678
251 Ga0501043_0057118 3300049579 Bacteria 3065
252 Ga0501046_0019826 3300049580 Bacteria 5569
253 Ga0501046_0036872 3300049580 Bacteria 3932
254 Ga0501046_0121220 3300049580 Bacteria 1989
255 Ga0501047_0024170 3300049581 Bacteria 5835
256 Ga0501047_0025750 3300049581 Bacteria 5657
257 Ga0501047_0029901 3300049581 Bacteria 5251
258 Ga0501047_0039235 3300049581 Bacteria 4581
259 Ga0501047_0076961 3300049581 Bacteria 3210
260 Ga0501047_0264458 3300049581 Bacteria 1567
261 Ga0501048_0004091 3300049582 Bacteria 11106
262 Ga0501068_0011059 3300049584 Bacteria 5081
263 Ga0501068_0067055 3300049584 Bacteria 2186
264 Ga0501070_0000044 3300049586 Bacteria 108859
265 Ga0501070_0007445 3300049586 Bacteria 9301
266 Ga0501070_0041279 3300049586 Bacteria 3844
267 Ga0501070_0074658 3300049586 Bacteria 2807
268 Ga0501071_0576424 3300049587 Bacteria 865
269 Ga0501073_0016325 3300049589 Bacteria 5381
270 Ga0501074_0125930 3300049590 Bacteria 1832
271 Ga0501080_0126697 3300049742 Bacteria 2365
272 Ga0501080_0168336 3300049742 Bacteria 2022
273 Ga0501080_0203230 3300049742 Bacteria 1818
274 Ga0501083_0000072 3300049744 Bacteria 66576
275 Ga0501083_0255899 3300049744 Bacteria 1139
276 Ga0501035_0015525 3300049822 Bacteria 7026
277 Ga0501035_0037231 3300049822 Bacteria 4407
278 Ga0501035_0114567 3300049822 Bacteria 2360
279 Ga0501035_0151081 3300049822 Bacteria 2015
280 Ga0501044_0012527 3300049823 Bacteria 9185
281 Ga0501044_0041211 3300049823 Bacteria 4807
282 Ga0501044_0205793 3300049823 Bacteria 1924
283 Ga0501044_0362905 3300049823 Bacteria 1366
284 Ga0501044_0800813 3300049823 Bacteria 821
285 Ga0501045_0008255 3300049824 Bacteria 7251
286 nmdc:mga08y16_508181_c1 3300050511 Bacteria 1223
287 Ga0500635_0000027 3300053080 Bacteria 104865
288 Ga0500635_0010828 3300053080 Bacteria 2575
289 Ga0500646_0001817 3300053090 Bacteria 5609
290 Ga0500641_0120664 3300053096 Unclassified 1130
291 Ga0500559_0000160 3300053136 Bacteria 53115
292 Ga0500568_0000176 3300053139 Bacteria 55879
293 Ga0500568_0002495 3300053139 Bacteria 10778
294 Ga0500573_0000007 3300053140 Bacteria 272970
295 Ga0500573_0134538 3300053140 Bacteria 1366
296 Ga0500573_0187590 3300053140 Bacteria 1107
297 Ga0500573_0193779 3300053140 Bacteria 1084
298 Ga0500588_0000900 3300053146 Bacteria 5238
299 Ga0500590_022704 3300053148 Bacteria 3261
300 Ga0466962_0046693 3300061719 Bacteria 2069

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041452 Ga0451793_0557285 Ga0451793_0557285_197_814 205
2 3300050511 nmdc:mga08y16_508181_c1 nmdc:mga08y16_508181_c1_119_763 206
3 3300005618 Ga0068864_100413341 Ga0068864_1004133412 216
4 3300013308 Ga0157375_10536238 Ga0157375_105362381 216
5 3300026095 Ga0207676_10217934 Ga0207676_102179342 216
6 3300026121 Ga0207683_10037467 Ga0207683_100374672 216
7 3300053140 Ga0500573_0134538 Ga0500573_0134538_223_897 216
8 3300049587 Ga0501071_0576424 Ga0501071_0576424_190_843 217
9 3300053080 Ga0500635_0000027 Ga0500635_0000027_102000_102659 217
10 3300005437 Ga0070710_10014256 Ga0070710_100142563 220
11 3300053140 Ga0500573_0193779 Ga0500573_0193779_265_930 220
12 3300005329 Ga0070683_100238545 Ga0070683_1002385452 221
13 3300005334 Ga0068869_100252282 Ga0068869_1002522821 221
14 3300005456 Ga0070678_100052008 Ga0070678_1000520083 221
15 3300005844 Ga0068862_100046777 Ga0068862_1000467774 221
16 3300009098 Ga0105245_10034984 Ga0105245_100349844 221
17 3300025923 Ga0207681_10048008 Ga0207681_100480083 221
18 3300025926 Ga0207659_10004997 Ga0207659_100049975 221
19 3300025927 Ga0207687_10045408 Ga0207687_100454082 221
20 3300025933 Ga0207706_10022358 Ga0207706_100223585 221
21 3300025944 Ga0207661_10008115 Ga0207661_100081153 221
22 3300025945 Ga0207679_10003679 Ga0207679_100036796 221
23 3300025981 Ga0207640_10244876 Ga0207640_102448762 221
24 3300026023 Ga0207677_10016007 Ga0207677_100160072 221
25 3300026035 Ga0207703_10172718 Ga0207703_101727182 221
26 3300026067 Ga0207678_10042617 Ga0207678_100426173 221
27 3300026075 Ga0207708_10020697 Ga0207708_100206972 221
28 3300026116 Ga0207674_10032536 Ga0207674_100325364 221
29 3300026118 Ga0207675_100042192 Ga0207675_1000421924 221
30 3300026121 Ga0207683_10075428 Ga0207683_100754283 221
31 3300031824 Ga0307413_10142658 Ga0307413_101426582 221
32 3300053090 Ga0500646_0001817 Ga0500646_0001817_4109_4792 221
33 3300053096 Ga0500641_0120664 Ga0500641_0120664_428_1111 221
34 3300053146 Ga0500588_0000900 Ga0500588_0000900_30_713 221
35 iso_pu_bacteria 2857733635 2857736792 221
36 3300045976 Ga0466967_0789942 Ga0466967_0789942_179_847 222
37 iso_pu_bacteria 2928104781 2928105296 222
38 3300005456 Ga0070678_100287039 Ga0070678_1002870392 223
39 3300009098 Ga0105245_10102723 Ga0105245_101027232 223
40 3300009098 Ga0105245_10985757 Ga0105245_109857572 223
41 3300014325 Ga0163163_11347004 Ga0163163_113470041 223
42 3300014969 Ga0157376_10114688 Ga0157376_101146882 223
43 3300025901 Ga0207688_10326002 Ga0207688_103260022 223
44 3300026121 Ga0207683_10157026 Ga0207683_101570262 223
45 3300026142 Ga0207698_10453402 Ga0207698_104534022 223
46 3300041441 Ga0451787_245081 Ga0451787_245081_14_685 223
47 3300041443 Ga0451789_0853087 Ga0451789_0853087_66_737 223
48 3300041451 Ga0451791_0707738 Ga0451791_0707738_636_1307 223
49 3300041452 Ga0451793_1220119 Ga0451793_1220119_702_1373 223
50 3300041494 Ga0451837_0536650 Ga0451837_0536650_590_1261 223
51 3300041509 Ga0451843_1400394 Ga0451843_1400394_69_740 223
52 3300041512 Ga0451853_0603757 Ga0451853_0603757_165_836 223
53 3300046476 Ga0495662_0068535 Ga0495662_0068535_297_968 223
54 3300046663 Ga0495635_0114162 Ga0495635_0114162_207_878 223
55 3300046674 Ga0495588_0244726 Ga0495588_0244726_158_829 223
56 3300046809 Ga0495600_0371888 Ga0495600_0371888_147_818 223
57 3300047319 Ga0495674_0657297 Ga0495674_0657297_99_770 223
58 3300048903 Ga0496100_0397762 Ga0496100_0397762_267_938 223
59 3300048903 Ga0496100_0440007 Ga0496100_0440007_207_878 223
60 3300048905 Ga0496102_0004816 Ga0496102_0004816_2633_3304 223
61 3300048906 Ga0496103_0061367 Ga0496103_0061367_1548_2219 223
62 3300048907 Ga0496104_0004287 Ga0496104_0004287_2577_3248 223
63 3300048908 Ga0496105_0010274 Ga0496105_0010274_3048_3719 223
64 3300048911 Ga0496108_0006223 Ga0496108_0006223_6863_7534 223
65 3300048911 Ga0496108_0413708 Ga0496108_0413708_321_992 223
66 3300048912 Ga0496109_0000639 Ga0496109_0000639_4939_5610 223
67 3300048913 Ga0496110_0018694 Ga0496110_0018694_2222_2893 223
68 3300048914 Ga0496111_0000328 Ga0496111_0000328_9164_9835 223
69 3300048915 Ga0496112_0076785 Ga0496112_0076785_809_1480 223
70 3300048917 Ga0496114_0037779 Ga0496114_0037779_183_854 223
71 3300048917 Ga0496114_0103033 Ga0496114_0103033_1519_2190 223
72 3300048917 Ga0496114_0135534 Ga0496114_0135534_1093_1764 223
73 3300048917 Ga0496114_0350374 Ga0496114_0350374_84_755 223
74 3300005339 Ga0070660_100712576 Ga0070660_1007125761 224
75 3300005563 Ga0068855_100069869 Ga0068855_1000698692 224
76 3300005563 Ga0068855_100206156 Ga0068855_1002061562 224
77 3300005614 Ga0068856_100354188 Ga0068856_1003541882 224
78 3300009093 Ga0105240_10783840 Ga0105240_107838402 224
79 3300009174 Ga0105241_10194488 Ga0105241_101944881 224
80 3300009545 Ga0105237_10561707 Ga0105237_105617071 224
81 3300009551 Ga0105238_10536951 Ga0105238_105369512 224
82 3300010375 Ga0105239_10144555 Ga0105239_101445552 224
83 3300025904 Ga0207647_10111611 Ga0207647_101116112 224
84 3300025913 Ga0207695_10148912 Ga0207695_101489121 224
85 3300025924 Ga0207694_10378711 Ga0207694_103787111 224
86 3300025949 Ga0207667_10239099 Ga0207667_102390992 224
87 3300025949 Ga0207667_10481308 Ga0207667_104813082 224
88 3300031649 Ga0307514_10025652 Ga0307514_100256524 224
89 3300044684 Ga0466966_0052669 Ga0466966_0052669_110_793 224
90 3300044694 Ga0466963_0012098 Ga0466963_0012098_3516_4193 224
91 3300044706 Ga0466964_0222375 Ga0466964_0222375_226_903 224
92 3300044765 Ga0466970_0083134 Ga0466970_0083134_681_1364 224
93 3300044842 Ga0466957_0297788 Ga0466957_0297788_332_1009 224
94 3300045976 Ga0466967_0077794 Ga0466967_0077794_2038_2712 224
95 3300048905 Ga0496102_0000881 Ga0496102_0000881_23377_24054 224
96 3300048908 Ga0496105_0324183 Ga0496105_0324183_267_944 224
97 3300048912 Ga0496109_0020957 Ga0496109_0020957_1488_2165 224
98 3300048914 Ga0496111_0646256 Ga0496111_0646256_70_747 224
99 3300049570 Ga0501033_0104137 Ga0501033_0104137_160_852 224
100 3300049571 Ga0501034_0061461 Ga0501034_0061461_982_1674 224
101 3300049571 Ga0501034_0342300 Ga0501034_0342300_301_981 224
102 3300049574 Ga0501038_0002168 Ga0501038_0002168_9797_10489 224
103 3300049575 Ga0501039_0233401 Ga0501039_0233401_45_737 224
104 3300049742 Ga0501080_0168336 Ga0501080_0168336_221_913 224
105 3300053140 Ga0500573_0000007 Ga0500573_0000007_13467_14141 224
106 iso_pu_bacteria 2984576629 2984579441 224
107 iso_pu_bacteria 2990256926 2990257050 224
108 3300003762 Ga0055542_1005441 Ga0055542_10054412 225
109 3300005344 Ga0070661_100241027 Ga0070661_1002410272 225
110 3300005365 Ga0070688_100372815 Ga0070688_1003728152 225
111 3300005367 Ga0070667_100004494 Ga0070667_1000044947 225
112 3300005455 Ga0070663_100766675 Ga0070663_1007666751 225
113 3300005563 Ga0068855_100215529 Ga0068855_1002155292 225
114 3300005563 Ga0068855_100444741 Ga0068855_1004447412 225
115 3300005577 Ga0068857_100000330 Ga0068857_1000003309 225
116 3300005577 Ga0068857_100396172 Ga0068857_1003961722 225
117 3300005578 Ga0068854_100062743 Ga0068854_1000627431 225
118 3300005614 Ga0068856_100167394 Ga0068856_1001673943 225
119 3300005614 Ga0068856_100435386 Ga0068856_1004353862 225
120 3300005614 Ga0068856_100443617 Ga0068856_1004436172 225
121 3300005616 Ga0068852_100005410 Ga0068852_1000054107 225
122 3300005616 Ga0068852_100005500 Ga0068852_10000550011 225
123 3300005834 Ga0068851_10000005 Ga0068851_1000000539 225
124 3300005841 Ga0068863_100139819 Ga0068863_1001398193 225
125 3300005842 Ga0068858_100002205 Ga0068858_10000220517 225
126 3300009093 Ga0105240_10005269 Ga0105240_1000526910 225
127 3300009093 Ga0105240_10291007 Ga0105240_102910073 225
128 3300009098 Ga0105245_10058883 Ga0105245_100588834 225
129 3300009174 Ga0105241_10007427 Ga0105241_100074275 225
130 3300009545 Ga0105237_10028916 Ga0105237_100289162 225
131 3300009545 Ga0105237_10097794 Ga0105237_100977942 225
132 3300009551 Ga0105238_10139950 Ga0105238_101399502 225
133 3300010375 Ga0105239_10222910 Ga0105239_102229104 225
134 3300010375 Ga0105239_10299847 Ga0105239_102998472 225
135 3300010375 Ga0105239_10534281 Ga0105239_105342812 225
136 3300013296 Ga0157374_10064534 Ga0157374_100645342 225
137 3300014968 Ga0157379_10000995 Ga0157379_1000099517 225
138 3300025254 Ga0209148_1000401 Ga0209148_100040143 225
139 3300025321 Ga0207656_10000001 Ga0207656_10000001262 225
140 3300025321 Ga0207656_10000003 Ga0207656_10000003368 225
141 3300025321 Ga0207656_10000004 Ga0207656_10000004225 225
142 3300025909 Ga0207705_10007466 Ga0207705_100074668 225
143 3300025911 Ga0207654_10000003 Ga0207654_10000003581 225
144 3300025913 Ga0207695_10005147 Ga0207695_1000514711 225
145 3300025913 Ga0207695_10011318 Ga0207695_100113184 225
146 3300025914 Ga0207671_10000001 Ga0207671_10000001260 225
147 3300025924 Ga0207694_10000066 Ga0207694_1000006654 225
148 3300025927 Ga0207687_10048347 Ga0207687_100483473 225
149 3300025941 Ga0207711_10017812 Ga0207711_100178125 225
150 3300025949 Ga0207667_10008774 Ga0207667_1000877410 225
151 3300025981 Ga0207640_10080160 Ga0207640_100801602 225
152 3300025986 Ga0207658_10006151 Ga0207658_100061515 225
153 3300026035 Ga0207703_10000026 Ga0207703_1000002693 225
154 3300026067 Ga0207678_10362667 Ga0207678_103626672 225
155 3300026078 Ga0207702_10044178 Ga0207702_100441781 225
156 3300026088 Ga0207641_10044956 Ga0207641_100449562 225
157 3300026116 Ga0207674_10011170 Ga0207674_100111702 225
158 3300026116 Ga0207674_10046207 Ga0207674_100462075 225
159 3300026142 Ga0207698_10000243 Ga0207698_1000024314 225
160 3300026142 Ga0207698_10001959 Ga0207698_100019599 225
161 3300026142 Ga0207698_10054314 Ga0207698_100543143 225
162 3300031649 Ga0307514_10045186 Ga0307514_100451864 225
163 3300044683 Ga0466965_0000012 Ga0466965_0000012_57104_57823 225
164 3300046471 Ga0495650_0000757 Ga0495650_0000757_38754_39443 225
165 3300048921 Ga0496118_0001331 Ga0496118_0001331_9871_10575 225
166 3300048921 Ga0496118_0201870 Ga0496118_0201870_211_906 225
167 3300048922 Ga0496119_0001492 Ga0496119_0001492_8880_9599 225
168 3300048922 Ga0496119_0070948 Ga0496119_0070948_719_1423 225
169 3300048923 Ga0496120_0000617 Ga0496120_0000617_11564_12283 225
170 3300048923 Ga0496120_0017300 Ga0496120_0017300_2503_3198 225
171 3300048927 Ga0496124_0000037 Ga0496124_0000037_61913_62617 225
172 3300048929 Ga0496126_0421479 Ga0496126_0421479_235_930 225
173 3300049568 Ga0501031_0166691 Ga0501031_0166691_428_1132 225
174 3300049569 Ga0501032_0055523 Ga0501032_0055523_600_1313 225
175 3300049569 Ga0501032_0208327 Ga0501032_0208327_239_928 225
176 3300049570 Ga0501033_0002749 Ga0501033_0002749_7044_7748 225
177 3300049571 Ga0501034_0103919 Ga0501034_0103919_1964_2653 225
178 3300049571 Ga0501034_0255919 Ga0501034_0255919_803_1507 225
179 3300049573 Ga0501037_0051042 Ga0501037_0051042_1549_2268 225
180 3300049573 Ga0501037_0470463 Ga0501037_0470463_135_839 225
181 3300049574 Ga0501038_0091380 Ga0501038_0091380_744_1448 225
182 3300049574 Ga0501038_0172065 Ga0501038_0172065_179_883 225
183 3300049574 Ga0501038_0357104 Ga0501038_0357104_424_1113 225
184 3300049579 Ga0501043_0029016 Ga0501043_0029016_367_1071 225
185 3300049581 Ga0501047_0264458 Ga0501047_0264458_301_1014 225
186 3300049584 Ga0501068_0067055 Ga0501068_0067055_1084_1788 225
187 3300049586 Ga0501070_0074658 Ga0501070_0074658_1530_2234 225
188 3300053080 Ga0500635_0010828 Ga0500635_0010828_945_1640 225
189 3300053139 Ga0500568_0000176 Ga0500568_0000176_33875_34576 225
190 3300053139 Ga0500568_0002495 Ga0500568_0002495_5346_6032 225
191 3300053140 Ga0500573_0187590 Ga0500573_0187590_181_861 225
192 3300053148 Ga0500590_022704 Ga0500590_022704_1559_2239 225
193 iso_pu_bacteria 2643221632 2644180886 226
194 iso_pu_bacteria 2808606372 2808902829 226
195 iso_pu_bacteria 2844841374 2844841600 226
196 iso_pu_bacteria 2919055335 2919057256 226
197 iso_pu_bacteria 2919523602 2919523608 226
198 iso_pu_bacteria 2928153084 2928155034 226
199 iso_pu_bacteria 2884763398 2884764520 227
200 3300049570 Ga0501033_0209471 Ga0501033_0209471_25_717 228
201 3300049572 Ga0501036_0131830 Ga0501036_0131830_1195_1887 228
202 3300049581 Ga0501047_0039235 Ga0501047_0039235_1867_2559 228
203 3300049823 Ga0501044_0362905 Ga0501044_0362905_23_715 228
204 iso_pu_bacteria 2844852863 2844855735 228
205 3300013105 Ga0157369_10000103 Ga0157369_1000010360 229
206 3300037418 Ga0395900_0006920 Ga0395900_0006920_1509_2198 229
207 3300038443 Ga0395901_0142352 Ga0395901_0142352_694_1383 229
208 3300048925 Ga0496122_0072057 Ga0496122_0072057_124_816 229
209 3300048926 Ga0496123_0011537 Ga0496123_0011537_1161_1853 229
210 3300049570 Ga0501033_0226629 Ga0501033_0226629_459_1154 229
211 3300049579 Ga0501043_0057118 Ga0501043_0057118_1868_2563 229
212 3300049744 Ga0501083_0000072 Ga0501083_0000072_52198_52893 229
213 3300049744 Ga0501083_0255899 Ga0501083_0255899_323_1018 229
214 3300053136 Ga0500559_0000160 Ga0500559_0000160_12553_13266 229
215 iso_pu_bacteria 8056037122 8056039603 229
216 3300002067 JGI24735J21928_10008481 JGI24735J21928_100084813 230
217 3300002772 JGI25164J39214_1002430 JGI25164J39214_10024302 230
218 3300003214 JGI25165J46597_1000044 JGI25165J46597_100004478 230
219 3300003578 Ga0006562J51391_1014374 Ga0006562J51391_101437415 230
220 3300003578 Ga0006562J51391_1014380 Ga0006562J51391_10143802 230
221 3300003752 Ga0055539_1000027 Ga0055539_100002789 230
222 3300003756 Ga0055533_1000020 Ga0055533_100002089 230
223 3300003759 Ga0055525_1000296 Ga0055525_100029618 230
224 3300003760 Ga0055527_1000005 Ga0055527_1000005358 230
225 3300003762 Ga0055542_1000006 Ga0055542_1000006358 230
226 3300003763 Ga0055529_1000013 Ga0055529_1000013267 230
227 3300003841 Ga0055541_1005885 Ga0055541_10058852 230
228 3300005327 Ga0070658_10701829 Ga0070658_107018291 230
229 3300009551 Ga0105238_10870265 Ga0105238_108702651 230
230 3300013105 Ga0157369_10258307 Ga0157369_102583072 230
231 3300013105 Ga0157369_10332451 Ga0157369_103324512 230
232 3300020082 Ga0206353_10373074 Ga0206353_1037307419 230
233 3300025225 Ga0209566_100043 Ga0209566_1000432 230
234 3300025226 Ga0209674_100001 Ga0209674_1000013808 230
235 3300025228 Ga0209672_100003 Ga0209672_100003701 230
236 3300025230 Ga0209563_100001 Ga0209563_1000013808 230
237 3300025230 Ga0209563_100497 Ga0209563_10049711 230
238 3300025231 Ga0207427_100126 Ga0207427_10012621 230
239 3300025233 Ga0209437_101068 Ga0209437_1010687 230
240 3300025253 Ga0209677_100001 Ga0209677_1000013808 230
241 3300025253 Ga0209677_100508 Ga0209677_10050815 230
242 3300025254 Ga0209148_1000004 Ga0209148_1000004996 230
243 3300025261 Ga0209233_1000014 Ga0209233_100001477 230
244 3300025272 Ga0209455_1000046 Ga0209455_100004615 230
245 3300025272 Ga0209455_1001325 Ga0209455_10013256 230
246 3300025904 Ga0207647_10161911 Ga0207647_101619112 230
247 3300037312 Ga0395899_0009371 Ga0395899_0009371_5933_6625 230
248 3300037312 Ga0395899_0121701 Ga0395899_0121701_22_714 230
249 3300037418 Ga0395900_0023085 Ga0395900_0023085_2721_3413 230
250 3300037466 Ga0395898_0000098 Ga0395898_0000098_166548_167240 230
251 3300038443 Ga0395901_0257767 Ga0395901_0257767_391_1083 230
252 3300044719 Ga0466971_0039284 Ga0466971_0039284_557_1249 230
253 3300044735 Ga0466968_0031411 Ga0466968_0031411_1056_1748 230
254 3300044765 Ga0466970_0021011 Ga0466970_0021011_505_1197 230
255 3300044765 Ga0466970_0026883 Ga0466970_0026883_2223_2915 230
256 3300044901 Ga0466960_0039947 Ga0466960_0039947_1155_1847 230
257 3300044901 Ga0466960_0043317 Ga0466960_0043317_1072_1764 230
258 3300045049 Ga0466959_0164282 Ga0466959_0164282_829_1521 230
259 3300048905 Ga0496102_0165741 Ga0496102_0165741_1002_1700 230
260 3300048917 Ga0496114_0055091 Ga0496114_0055091_1111_1806 230
261 3300048918 Ga0496115_0108127 Ga0496115_0108127_249_944 230
262 3300048918 Ga0496115_0151932 Ga0496115_0151932_535_1230 230
263 3300048920 Ga0496117_0019539 Ga0496117_0019539_1859_2551 230
264 3300048921 Ga0496118_0003500 Ga0496118_0003500_4967_5659 230
265 3300049569 Ga0501032_0030755 Ga0501032_0030755_2293_2988 230
266 3300049570 Ga0501033_0008436 Ga0501033_0008436_4968_5663 230
267 3300049570 Ga0501033_0013534 Ga0501033_0013534_3555_4250 230
268 3300049570 Ga0501033_0016961 Ga0501033_0016961_4713_5405 230
269 3300049571 Ga0501034_0007316 Ga0501034_0007316_3817_4512 230
270 3300049571 Ga0501034_0037543 Ga0501034_0037543_364_1059 230
271 3300049571 Ga0501034_0066978 Ga0501034_0066978_1903_2598 230
272 3300049571 Ga0501034_0071358 Ga0501034_0071358_30_722 230
273 3300049572 Ga0501036_0007703 Ga0501036_0007703_7475_8167 230
274 3300049572 Ga0501036_0060066 Ga0501036_0060066_1030_1725 230
275 3300049573 Ga0501037_0010089 Ga0501037_0010089_4948_5643 230
276 3300049573 Ga0501037_0030172 Ga0501037_0030172_1055_1750 230
277 3300049574 Ga0501038_0008790 Ga0501038_0008790_3092_3784 230
278 3300049574 Ga0501038_0028821 Ga0501038_0028821_1141_1836 230
279 3300049575 Ga0501039_0008389 Ga0501039_0008389_6003_6698 230
280 3300049575 Ga0501039_0008664 Ga0501039_0008664_3092_3784 230
281 3300049575 Ga0501039_0318342 Ga0501039_0318342_178_873 230
282 3300049578 Ga0501042_0017801 Ga0501042_0017801_2924_3619 230
283 3300049578 Ga0501042_0076854 Ga0501042_0076854_726_1421 230
284 3300049578 Ga0501042_0142472 Ga0501042_0142472_888_1580 230
285 3300049579 Ga0501043_0018427 Ga0501043_0018427_2964_3656 230
286 3300049579 Ga0501043_0024007 Ga0501043_0024007_3093_3788 230
287 3300049579 Ga0501043_0040157 Ga0501043_0040157_1204_1899 230
288 3300049580 Ga0501046_0019826 Ga0501046_0019826_2715_3407 230
289 3300049580 Ga0501046_0036872 Ga0501046_0036872_919_1614 230
290 3300049580 Ga0501046_0121220 Ga0501046_0121220_1129_1824 230
291 3300049581 Ga0501047_0024170 Ga0501047_0024170_977_1669 230
292 3300049581 Ga0501047_0025750 Ga0501047_0025750_3093_3788 230
293 3300049581 Ga0501047_0029901 Ga0501047_0029901_2379_3074 230
294 3300049581 Ga0501047_0076961 Ga0501047_0076961_555_1250 230
295 3300049582 Ga0501048_0004091 Ga0501048_0004091_5524_6219 230
296 3300049584 Ga0501068_0011059 Ga0501068_0011059_2476_3168 230
297 3300049586 Ga0501070_0000044 Ga0501070_0000044_52786_53478 230
298 3300049586 Ga0501070_0007445 Ga0501070_0007445_5184_5876 230
299 3300049586 Ga0501070_0041279 Ga0501070_0041279_2179_2874 230
300 3300049589 Ga0501073_0016325 Ga0501073_0016325_1017_1712 230
301 3300049590 Ga0501074_0125930 Ga0501074_0125930_670_1365 230
302 3300049742 Ga0501080_0126697 Ga0501080_0126697_692_1384 230
303 3300049742 Ga0501080_0203230 Ga0501080_0203230_941_1636 230
304 3300049822 Ga0501035_0015525 Ga0501035_0015525_1961_2656 230
305 3300049822 Ga0501035_0037231 Ga0501035_0037231_2361_3053 230
306 3300049822 Ga0501035_0114567 Ga0501035_0114567_1009_1704 230
307 3300049822 Ga0501035_0151081 Ga0501035_0151081_112_807 230
308 3300049823 Ga0501044_0012527 Ga0501044_0012527_3147_3842 230
309 3300049823 Ga0501044_0041211 Ga0501044_0041211_1948_2643 230
310 3300049823 Ga0501044_0205793 Ga0501044_0205793_21_716 230
311 3300049823 Ga0501044_0800813 Ga0501044_0800813_100_792 230
312 3300049824 Ga0501045_0008255 Ga0501045_0008255_1543_2235 230
313 3300061719 Ga0466962_0046693 Ga0466962_0046693_1353_2045 230
314 iso_pu_bacteria 2643221616 2644095121 230

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03167

UDG

Uracil DNA glycosylase superfamily

76

235

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
8i6d-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis uracil-dna glycosylase in complex with 5-hydroxy-2,4(1h,3h)-pyrimidinedione, form vi 0.9106 13 229
8i6d-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis uracil-dna glycosylase in complex with 5-hydroxy-2,4(1h,3h)-pyrimidinedione, form vi 0.8874 13 229
8i63-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis uracil-dna glycosylase in complex with barbituric acid, form iii 0.8749 5 229
3ufm-assembly1.cif.gz_A co-crystal structure of deinococcus radiodurans uracil-dna glycosylase and the c-terminus of the single-stranded dna-binding protein 0.874 13 229
2ssp-assembly1.cif.gz_E leucine-272-alanine uracil-dna glycosylase bound to abasic site-containing dna 0.8716 28 226
ID Description Score Start End Superfamily
3a7nA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8744 2 229 3.40.470.10
3a7nA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8638 2 229 3.40.470.10
af_Q1ZXM2_175_429_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8358 1 229 3.40.470.10
af_Q1ZXM2_175_429_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8292 1 229 3.40.470.10
af_Q8ILU6_89_322_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.826 5 230 3.40.470.10
ID Description Score Start End GO Terms
AF-W1VK98-F1-model_v4 uracil-DNA glycosylase (EC 3.2.2.27) 0.9621 95 229 GO:0004844
GO:0097510
AF-A0A7K1A052-F1-model_v4 Uracil-DNA glycosylase (EC 3.2.2.27) 0.9491 108 229 GO:0004844
GO:0097510
AF-W1VK98-F1-model_v4 uracil-DNA glycosylase (EC 3.2.2.27) 0.9417 95 229 GO:0004844
GO:0097510
AF-A0A7I8ANC8-F1-model_v4 deleted 0.9341 81 228
AF-A0A7V6ILG9-F1-model_v4 uracil-DNA glycosylase (EC 3.2.2.27) 0.9284 85 228 GO:0004844
GO:0097510

Feature Viewer

pLDDT pTM Quality
88.12 0.89 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map