F402311

General Info

Members Datasets Scaffolds Average Seq Length
313 222 293 296

Family's Representative Sequence

Representative Sequence 3300042136|Ga0450900_002794|Ga0450900_002794_635_1630
Length 331
Sequence VFWRSWQHPYPDSNRVDPRALAAVQQSTTTRYAGGHLPRRLEPNMSSPLIIRPRAESVEGQPILRPLPSAQCRSVGPFVFFDHMLETDYAPGSGMDIRQHPHIGLSTLTYLFEGEILHKDSLGSDQRVLPGDVSWMTAGRGVAHVERTPAEGFAKGSRLHGLQVWLASPREHEQGLASYSHHPAASLPVRETLGVRICLIAGNGFCLESPVPVLSPTLYAHVRMQPATTLLVPNEHAQRALYLLDGELQLNGQEVEPCSLLVLPEGEEVTLYAEGECQLVLIGGAPLDGPRRMNWNFVASDPALIEQARVRWAAGDWPVVPGEIERIELPR

Samples

Sample ID Description Type Environment
1 2511231024 Pseudomonas sp. GM84 Isolate Nodule
2 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
3 2554235231 Pseudomonas putida MTCC 5279 Isolate Unclassified
4 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
5 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
6 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
7 2765235841 Pseudomonas putida AA7 Isolate Unclassified
8 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
9 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
10 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
11 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
12 2939651529 Pseudomonas sp. 2835 Isolate Rhizosphere
13 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
14 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
15 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
16 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
18 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
19 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
20 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
21 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
22 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
23 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
24 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
25 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
28 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
29 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
30 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
31 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
32 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
33 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
50 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
51 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
63 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
64 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
65 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
70 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
71 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
94 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
99 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
100 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
107 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
113 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
116 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
117 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
118 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
126 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
127 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
128 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
129 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
130 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
131 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
132 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
133 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
134 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
135 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
136 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
137 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
138 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
139 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
140 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
141 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
142 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
143 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
144 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
145 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
146 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
147 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
148 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
149 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
150 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
151 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
152 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
153 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
154 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
155 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
156 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
157 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
158 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
159 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
160 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
161 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
162 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
163 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
164 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
165 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
166 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
167 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
168 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
169 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
170 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
171 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
172 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
173 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
174 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
175 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
176 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
177 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
178 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
179 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
180 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
181 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
182 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
183 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
184 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
185 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
186 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
187 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
188 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
189 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
190 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
191 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
192 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
194 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
197 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
198 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
199 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
201 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
202 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
203 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
204 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
205 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
206 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
207 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
208 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
209 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
210 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
211 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
212 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
213 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
214 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
215 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
216 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
217 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
218 8011350971 Pseudomonas sp. 30_B Isolate Rhizosphere
219 8052494512 Pseudomonas putida LD6 Isolate Unclassified
220 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
221 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified
222 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.97
Metatranscriptomes 0.64
Isolates 6.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.14
Nodule 0.64
Rhizoplane 1.28
Rhizosphere 67.41
Stem 0
Stem Tuber 0
Unclassified 18.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10002386 3300003187 Bacteria 11392
2 JGI25406J46586_10007637 3300003203 Bacteria 4921
3 JGI25406J46586_10012538 3300003203 Bacteria 3673
4 Ga0006562J51391_1023233 3300003578 Bacteria 4010
5 Ga0006562J51391_1023235 3300003578 Bacteria 2185
6 Ga0055539_1000248 3300003752 Bacteria 34822
7 Ga0055533_1000102 3300003756 Bacteria 108801
8 Ga0055525_1001166 3300003759 Bacteria 6125
9 Ga0055526_1009479 3300003771 Bacteria 4673
10 Ga0055526_1015013 3300003771 Bacteria 3138
11 Ga0055536_1000134 3300003781 Bacteria 63257
12 Ga0055536_1003108 3300003781 Bacteria 9030
13 Ga0055536_1003641 3300003781 Bacteria 8210
14 Ga0065704_10003677 3300005289 Bacteria 6383
15 Ga0065704_10072175 3300005289 Bacteria 9007
16 Ga0070683_100216025 3300005329 Bacteria 1822
17 Ga0070690_100041079 3300005330 Bacteria 2927
18 Ga0070680_100428577 3300005336 Bacteria 1128
19 Ga0070682_100212272 3300005337 Bacteria 1372
20 Ga0070689_100547367 3300005340 Bacteria 997
21 Ga0070669_100007782 3300005353 Bacteria 7654
22 Ga0070674_100001812 3300005356 Bacteria 11600
23 Ga0070709_10033695 3300005434 Bacteria 3100
24 Ga0070713_100035516 3300005436 Bacteria 4013
25 Ga0070710_10017301 3300005437 Bacteria 3686
26 Ga0070681_10148006 3300005458 Bacteria 2276
27 Ga0070699_100005981 3300005518 Bacteria 10632
28 Ga0070699_100631738 3300005518 Bacteria 977
29 Ga0070684_100064461 3300005535 Bacteria 3214
30 Ga0068853_100484822 3300005539 Bacteria 1166
31 Ga0068855_100000820 3300005563 Bacteria 38445
32 Ga0068855_100338092 3300005563 Bacteria 1661
33 Ga0068857_100304127 3300005577 Bacteria 1471
34 Ga0068856_100104910 3300005614 Bacteria 2821
35 Ga0068861_100014992 3300005719 Bacteria 5451
36 Ga0068861_100117019 3300005719 Bacteria 2144
37 Ga0068862_100023597 3300005844 Bacteria 5155
38 Ga0081539_10000076 3300005985 Bacteria 229037
39 Ga0081539_10005670 3300005985 Bacteria 12532
40 Ga0075366_10201842 3300006195 Bacteria 1210
41 Ga0075428_100325928 3300006844 Bacteria 1650
42 Ga0075430_100029850 3300006846 Bacteria 4629
43 Ga0075431_100132372 3300006847 Bacteria 2572
44 Ga0068865_100093153 3300006881 Bacteria 2190
45 Ga0105251_10016646 3300009011 Bacteria 3964
46 Ga0105244_10013609 3300009036 Bacteria 4744
47 Ga0105244_10018343 3300009036 Bacteria 3927
48 Ga0105244_10021850 3300009036 Bacteria 3529
49 Ga0105250_10027501 3300009092 Bacteria 2292
50 Ga0105250_10031145 3300009092 Bacteria 2142
51 Ga0105240_10082577 3300009093 Bacteria 3946
52 Ga0111539_10000167 3300009094 Bacteria 75742
53 Ga0111539_10267967 3300009094 Bacteria 1988
54 Ga0114129_10060591 3300009147 Bacteria 5291
55 Ga0105243_10051139 3300009148 Bacteria 3267
56 Ga0105249_10063859 3300009553 Bacteria 3384
57 Ga0105249_10115276 3300009553 Bacteria 2545
58 Ga0105246_10377113 3300011119 Bacteria 1171
59 Ga0157371_10004927 3300013102 Bacteria 11474
60 Ga0157370_10052690 3300013104 Bacteria 3884
61 Ga0157370_10072473 3300013104 Bacteria 3250
62 Ga0157369_10448376 3300013105 Bacteria 1336
63 Ga0157380_10062628 3300014326 Bacteria 2980
64 Ga0213876_10077706 3300021384 Bacteria 1753
65 Ga0213875_10013221 3300021388 Bacteria 4059
66 Ga0213875_10095221 3300021388 Bacteria 1388
67 Ga0213871_10003598 3300021441 Bacteria 3007
68 Ga0209674_100015 3300025226 Bacteria 697299
69 Ga0209563_100017 3300025230 Bacteria 796449
70 Ga0207427_100251 3300025231 Bacteria 42496
71 Ga0209677_100022 3300025253 Bacteria 410724
72 Ga0209677_100625 3300025253 Bacteria 18996
73 Ga0209759_1012575 3300025256 Bacteria 2338
74 Ga0209130_1020807 3300025284 Bacteria 1493
75 Ga0209675_1000191 3300025291 Bacteria 67500
76 Ga0209676_1000036 3300025292 Bacteria 457623
77 Ga0209676_1000474 3300025292 Bacteria 66391
78 Ga0209676_1000946 3300025292 Bacteria 35654
79 Ga0209676_1008797 3300025292 Bacteria 4446
80 Ga0209025_1001806 3300025294 Bacteria 25356
81 Ga0209025_1002048 3300025294 Bacteria 22965
82 Ga0209025_1023224 3300025294 Bacteria 3250
83 Ga0209564_1002275 3300025295 Bacteria 15701
84 Ga0209564_1004020 3300025295 Bacteria 9304
85 Ga0209050_1005221 3300025298 Bacteria 8296
86 Ga0209256_1001334 3300025299 Bacteria 26338
87 Ga0209051_1024601 3300025303 Bacteria 2471
88 Ga0209257_1001226 3300025304 Bacteria 31906
89 Ga0207696_1000081 3300025711 Bacteria 198887
90 Ga0207696_1011633 3300025711 Bacteria 3157
91 Ga0207655_1000530 3300025728 Bacteria 48477
92 Ga0207655_1002985 3300025728 Bacteria 12973
93 Ga0207655_1024962 3300025728 Bacteria 2914
94 Ga0207655_1038802 3300025728 Bacteria 2076
95 Ga0207713_1002570 3300025735 Bacteria 13108
96 Ga0207713_1003886 3300025735 Bacteria 9953
97 Ga0207713_1012580 3300025735 Bacteria 4510
98 Ga0207713_1031191 3300025735 Bacteria 2360
99 Ga0207699_10256731 3300025906 Bacteria 1207
100 Ga0207707_10103336 3300025912 Bacteria 2491
101 Ga0207670_10554071 3300025936 Bacteria 940
102 Ga0207669_10063953 3300025937 Bacteria 2274
103 Ga0207704_10150638 3300025938 Bacteria 1641
104 Ga0207691_10208842 3300025940 Bacteria 1697
105 Ga0207661_10129554 3300025944 Bacteria 2159
106 Ga0207667_10000792 3300025949 Bacteria 41080
107 Ga0207667_10655537 3300025949 Bacteria 1055
108 Ga0207712_10055110 3300025961 Bacteria 2795
109 Ga0207674_10243559 3300026116 Bacteria 1745
110 Ga0207675_100062911 3300026118 Bacteria 3467
111 Ga0207675_100117723 3300026118 Bacteria 2512
112 Ga0209389_1001707 3300027296 Bacteria 15879
113 Ga0209371_1000615 3300027312 Bacteria 31768
114 Ga0207428_10000055 3300027907 Bacteria 166460
115 Ga0268265_10349646 3300028380 Bacteria 1349
116 Ga0265338_10002911 3300028800 Bacteria 24870
117 Ga0265338_10287145 3300028800 Bacteria 1200
118 Ga0268256_1000528 3300030500 Bacteria 31946
119 Ga0265328_10005063 3300031239 Bacteria 5678
120 Ga0265320_10003501 3300031240 Bacteria 10523
121 Ga0265320_10009751 3300031240 Bacteria 5762
122 Ga0265339_10010457 3300031249 Bacteria 5763
123 Ga0307408_100069525 3300031548 Bacteria 2597
124 Ga0265314_10012839 3300031711 Bacteria 6806
125 Ga0265342_10000398 3300031712 Bacteria 48108
126 Ga0265342_10001645 3300031712 Bacteria 20582
127 Ga0316576_10067570 3300031727 Bacteria 2631
128 Ga0316576_10123978 3300031727 Bacteria 1941
129 Ga0316576_10414812 3300031727 Bacteria 997
130 Ga0316577_10139804 3300031733 Bacteria 1364
131 Ga0307413_10144829 3300031824 Bacteria 1647
132 Ga0307410_10040516 3300031852 Bacteria 3066
133 Ga0307406_10007071 3300031901 Bacteria 6213
134 Ga0307406_10011879 3300031901 Bacteria 4948
135 Ga0307412_10006069 3300031911 Bacteria 6802
136 Ga0307409_100129719 3300031995 Bacteria 2152
137 Ga0307409_100393095 3300031995 Bacteria 1322
138 Ga0307416_100107812 3300032002 Bacteria 2446
139 Ga0307416_100185962 3300032002 Bacteria 1953
140 Ga0307414_10402454 3300032004 Bacteria 1189
141 Ga0307411_10001917 3300032005 Bacteria 8884
142 Ga0373959_0017445 3300034820 Bacteria 1340
143 Ga0373934_0002291 3300035086 Bacteria 7046
144 Ga0316574_0242246 3300035398 Bacteria 1153
145 Ga0373933_0133097 3300035724 Bacteria 1565
146 Ga0373937_0005820 3300036401 Bacteria 10601
147 Ga0373937_0072796 3300036401 Bacteria 3170
148 Ga0373937_0126580 3300036401 Bacteria 2384
149 Ga0316584_0018794 3300036712 Bacteria 4989
150 Ga0373925_0190520 3300037068 Bacteria 1627
151 Ga0395900_0179864 3300037418 Bacteria 2150
152 Ga0436364_0388964 3300037853 Bacteria 3791
153 Ga0436364_0807347 3300037853 Bacteria 27586
154 Ga0436364_1480454 3300037853 Bacteria 10318
155 Ga0436365_0106047 3300039437 Bacteria 5174
156 Ga0436365_0200119 3300039437 Bacteria 2722
157 Ga0436360_0392249 3300039438 Bacteria 1893
158 Ga0436360_1245879 3300039438 Bacteria 8937
159 Ga0436361_0908761 3300039447 Bacteria 1897
160 Ga0436363_0440276 3300039450 Bacteria 3156
161 Ga0436363_0907193 3300039450 Bacteria 4332
162 Ga0436363_1013231 3300039450 Bacteria 1323
163 Ga0436362_0735911 3300039453 Bacteria 8022
164 Ga0439461_0002545 3300041410 Bacteria 2926
165 Ga0451807_0495322 3300041486 Bacteria 1807
166 Ga0451849_1091142 3300041505 Bacteria 2646
167 Ga0451853_1035559 3300041512 Bacteria 11386
168 Ga0439432_005492 3300042006 Bacteria 4560
169 Ga0450900_002794 3300042136 Bacteria 1883
170 Ga0439446_0021020 3300042156 Bacteria 1842
171 Ga0439434_0000207 3300042435 Bacteria 16234
172 Ga0439435_0000168 3300042436 Bacteria 9079
173 Ga0450901_000664 3300042533 Bacteria 4062
174 Ga0466969_0005725 3300044656 Bacteria 6606
175 Ga0466965_0007539 3300044683 Bacteria 5003
176 Ga0466966_0004445 3300044684 Bacteria 9246
177 Ga0466963_0120779 3300044694 Bacteria 1803
178 Ga0466971_0028737 3300044719 Bacteria 2486
179 Ga0466970_0046422 3300044765 Bacteria 2313
180 Ga0466957_0011127 3300044842 Bacteria 5181
181 Ga0466959_0036974 3300045049 Bacteria 3606
182 Ga0466967_0170928 3300045976 Bacteria 2045
183 Ga0466967_0284545 3300045976 Bacteria 1587
184 Ga0495627_001983 3300046453 Bacteria 10568
185 Ga0495591_008610 3300046458 Bacteria 4159
186 Ga0495629_0051798 3300046459 Bacteria 2872
187 Ga0495580_0042275 3300046472 Bacteria 3247
188 Ga0495582_0028969 3300046473 Bacteria 3040
189 Ga0495607_0016531 3300046501 Bacteria 4759
190 Ga0495583_0000071 3300046506 Bacteria 183691
191 Ga0495583_0023383 3300046506 Bacteria 3127
192 Ga0495606_0002590 3300046507 Bacteria 20694
193 Ga0495608_0215881 3300046511 Bacteria 1205
194 Ga0495620_0000083 3300046515 Bacteria 78909
195 Ga0495630_0126460 3300046517 Bacteria 1940
196 Ga0495631_0007693 3300046518 Bacteria 5470
197 Ga0495631_0010358 3300046518 Bacteria 4614
198 Ga0495632_0015862 3300046519 Bacteria 4208
199 Ga0495632_0016540 3300046519 Bacteria 4099
200 Ga0495632_0084418 3300046519 Bacteria 1511
201 Ga0495637_0017425 3300046520 Bacteria 3347
202 Ga0495643_0004357 3300046522 Bacteria 9926
203 Ga0495643_0007246 3300046522 Bacteria 7185
204 Ga0495643_0014716 3300046522 Bacteria 4647
205 Ga0495648_0018439 3300046524 Bacteria 4939
206 Ga0495648_0019333 3300046524 Bacteria 4793
207 Ga0495654_0009901 3300046530 Bacteria 5210
208 Ga0495654_0011365 3300046530 Bacteria 4819
209 Ga0495645_0250596 3300046543 Bacteria 1177
210 Ga0495633_0000346 3300046558 Bacteria 51470
211 Ga0495668_0018229 3300046616 Bacteria 4057
212 Ga0495611_0008526 3300046648 Bacteria 4334
213 Ga0495625_0003993 3300046660 Bacteria 14137
214 Ga0495635_0144371 3300046663 Bacteria 1621
215 Ga0495658_0001944 3300046683 Bacteria 10565
216 Ga0495613_0210061 3300046689 Bacteria 1369
217 Ga0495671_0011704 3300046692 Bacteria 4810
218 Ga0495671_0022837 3300046692 Bacteria 3272
219 Ga0495649_0000179 3300046694 Bacteria 55267
220 Ga0495649_0005376 3300046694 Bacteria 8156
221 Ga0495589_0005050 3300046794 Bacteria 6982
222 Ga0495660_0025611 3300046810 Bacteria 3349
223 Ga0495672_0013567 3300047320 Bacteria 5615
224 Ga0495673_0019395 3300047469 Bacteria 3407
225 Ga0495673_0024494 3300047469 Bacteria 2915
226 Ga0496110_0307141 3300048913 Bacteria 1445
227 Ga0496111_0129454 3300048914 Bacteria 1867
228 Ga0496114_0039393 3300048917 Bacteria 3910
229 Ga0496116_0008334 3300048919 Bacteria 9008
230 Ga0496116_0070006 3300048919 Bacteria 2228
231 Ga0496117_0020333 3300048920 Bacteria 5413
232 Ga0496117_0023132 3300048920 Bacteria 4963
233 Ga0496117_0214141 3300048920 Bacteria 1077
234 Ga0496118_0020859 3300048921 Bacteria 5796
235 Ga0496118_0091875 3300048921 Bacteria 2085
236 Ga0496118_0153317 3300048921 Bacteria 1438
237 Ga0496119_0022610 3300048922 Bacteria 4493
238 Ga0496119_0047431 3300048922 Bacteria 2673
239 Ga0496119_0231946 3300048922 Bacteria 939
240 Ga0496122_0004029 3300048925 Bacteria 18674
241 Ga0496122_0042438 3300048925 Bacteria 3579
242 Ga0496122_0057421 3300048925 Bacteria 2890
243 Ga0496123_0001489 3300048926 Bacteria 32524
244 Ga0496123_0006174 3300048926 Bacteria 11714
245 Ga0496123_0027076 3300048926 Bacteria 4278
246 Ga0496124_0009003 3300048927 Bacteria 10330
247 Ga0496124_0027491 3300048927 Bacteria 5105
248 Ga0496124_0082521 3300048927 Bacteria 2638
249 Ga0496124_0096708 3300048927 Bacteria 2398
250 Ga0496124_0132539 3300048927 Bacteria 1978
251 Ga0496125_0000294 3300048928 Bacteria 98233
252 Ga0496125_0000793 3300048928 Bacteria 51550
253 Ga0496125_0100055 3300048928 Bacteria 2138
254 Ga0496125_0104173 3300048928 Bacteria 2079
255 Ga0496125_0208167 3300048928 Bacteria 1273
256 Ga0496126_0018254 3300048929 Bacteria 6959
257 Ga0496126_0156755 3300048929 Bacteria 1948
258 Ga0495678_004373 3300049459 Bacteria 8204
259 Ga0495678_014959 3300049459 Bacteria 3589
260 Ga0501032_0073093 3300049569 Bacteria 2285
261 Ga0501034_0002511 3300049571 Bacteria 22011
262 Ga0501034_0025238 3300049571 Bacteria 6049
263 Ga0501037_0004046 3300049573 Bacteria 10633
264 Ga0501037_0093764 3300049573 Bacteria 2171
265 Ga0501038_0003838 3300049574 Bacteria 13975
266 Ga0501039_0035933 3300049575 Bacteria 3823
267 Ga0501039_0090243 3300049575 Bacteria 2388
268 Ga0501042_0041929 3300049578 Bacteria 3256
269 Ga0501046_0002598 3300049580 Bacteria 16882
270 Ga0501047_0007491 3300049581 Bacteria 10271
271 Ga0501067_0067274 3300049583 Bacteria 1983
272 Ga0501070_0005674 3300049586 Bacteria 10642
273 Ga0501070_0264183 3300049586 Bacteria 1406
274 Ga0501070_0292079 3300049586 Bacteria 1328
275 Ga0501072_0113132 3300049588 Bacteria 2161
276 Ga0501073_0000378 3300049589 Bacteria 30081
277 Ga0501073_0472265 3300049589 Unclassified 867
278 Ga0501074_0001622 3300049590 Bacteria 15254
279 Ga0501075_0334936 3300049591 Bacteria 1153
280 Ga0501044_0057471 3300049823 Bacteria 3992
281 Ga0501045_0388025 3300049824 Bacteria 1039
282 nmdc:mga05p37_101925_c1 3300050507 Bacteria 3535
283 nmdc:mga0qj67_455726_c1 3300050509 Bacteria 1030
284 nmdc:mga08y16_37_c1 3300050511 Bacteria 150340
285 Ga0500644_0002229 3300053088 Bacteria 4890
286 Ga0500651_0001577 3300053093 Bacteria 11582
287 Ga0500651_0014399 3300053093 Bacteria 4840
288 Ga0500651_0128247 3300053093 Bacteria 1535
289 Ga0500608_028076 3300053122 Bacteria 2655
290 Ga0500659_0015206 3300053135 Bacteria 4199
291 Ga0500573_0022419 3300053140 Bacteria 3624
292 Ga0500590_009700 3300053148 Bacteria 4848
293 Ga0590071_007355 3300059421 Bacteria 2603

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049589 Ga0501073_0472265 Ga0501073_0472265_17_805 250
2 3300049591 Ga0501075_0334936 Ga0501075_0334936_79_894 251
3 3300005340 Ga0070689_100547367 Ga0070689_1005473671 258
4 3300025936 Ga0207670_10554071 Ga0207670_105540711 258
5 3300037068 Ga0373925_0190520 Ga0373925_0190520_512_1333 260
6 3300049586 Ga0501070_0292079 Ga0501070_0292079_97_912 260
7 3300046519 Ga0495632_0084418 Ga0495632_0084418_342_1142 264
8 3300005614 Ga0068856_100104910 Ga0068856_1001049103 268
9 3300005437 Ga0070710_10017301 Ga0070710_100173014 271
10 3300036401 Ga0373937_0005820 Ga0373937_0005820_7593_8495 271
11 3300005337 Ga0070682_100212272 Ga0070682_1002122721 273
12 3300031727 Ga0316576_10067570 Ga0316576_100675702 273
13 3300031733 Ga0316577_10139804 Ga0316577_101398042 273
14 3300048922 Ga0496119_0022610 Ga0496119_0022610_1533_2480 274
15 3300005436 Ga0070713_100035516 Ga0070713_1000355161 277
16 3300025253 Ga0209677_100625 Ga0209677_10062518 277
17 3300031901 Ga0307406_10011879 Ga0307406_100118792 278
18 3300049569 Ga0501032_0073093 Ga0501032_0073093_969_1913 280
19 3300049573 Ga0501037_0004046 Ga0501037_0004046_3635_4579 280
20 3300049575 Ga0501039_0090243 Ga0501039_0090243_293_1237 280
21 3300049580 Ga0501046_0002598 Ga0501046_0002598_12284_13228 280
22 3300049586 Ga0501070_0005674 Ga0501070_0005674_5492_6436 280
23 3300041505 Ga0451849_1091142 Ga0451849_1091142_324_1196 282
24 iso_pu_bacteria 2939651529 2939655479 282
25 3300006847 Ga0075431_100132372 Ga0075431_1001323722 283
26 3300041410 Ga0439461_0002545 Ga0439461_0002545_1378_2256 283
27 3300042156 Ga0439446_0021020 Ga0439446_0021020_600_1478 283
28 3300042435 Ga0439434_0000207 Ga0439434_0000207_8790_9668 283
29 3300042436 Ga0439435_0000168 Ga0439435_0000168_2200_3078 283
30 iso_pu_bacteria 2511231024 2511374052 283
31 iso_pu_bacteria 2554235231 2555247182 283
32 iso_pu_bacteria 2643221574 2643882513 283
33 iso_pu_bacteria 2643221663 2644353461 283
34 iso_pu_bacteria 2643221699 2644550591 283
35 iso_pu_bacteria 2643221699 2644551640 283
36 iso_pu_bacteria 2765235841 2765582967 283
37 iso_pu_bacteria 2928972540 2928974506 283
38 iso_pu_bacteria 2977240413 2977243430 283
39 iso_pu_bacteria 3007803356 3007808502 283
40 iso_pu_bacteria 8052494512 8052498298 283
41 iso_pu_bacteria 8054929484 8054931449 283
42 iso_pu_bacteria 8056115690 8056119662 283
43 3300005353 Ga0070669_100007782 Ga0070669_1000077826 284
44 3300005356 Ga0070674_100001812 Ga0070674_1000018123 284
45 3300005518 Ga0070699_100631738 Ga0070699_1006317381 284
46 3300005719 Ga0068861_100014992 Ga0068861_1000149923 284
47 3300005844 Ga0068862_100023597 Ga0068862_1000235975 284
48 3300005985 Ga0081539_10005670 Ga0081539_1000567015 284
49 3300006844 Ga0075428_100325928 Ga0075428_1003259281 284
50 3300006881 Ga0068865_100093153 Ga0068865_1000931532 284
51 3300009094 Ga0111539_10000167 Ga0111539_1000016724 284
52 3300009094 Ga0111539_10267967 Ga0111539_102679672 284
53 3300009147 Ga0114129_10060591 Ga0114129_100605914 284
54 3300009553 Ga0105249_10063859 Ga0105249_100638593 284
55 3300014326 Ga0157380_10062628 Ga0157380_100626282 284
56 3300025937 Ga0207669_10063953 Ga0207669_100639533 284
57 3300025938 Ga0207704_10150638 Ga0207704_101506382 284
58 3300025961 Ga0207712_10055110 Ga0207712_100551103 284
59 3300026118 Ga0207675_100062911 Ga0207675_1000629112 284
60 3300027907 Ga0207428_10000055 Ga0207428_10000055118 284
61 3300028380 Ga0268265_10349646 Ga0268265_103496462 284
62 3300032005 Ga0307411_10001917 Ga0307411_100019173 284
63 3300050507 nmdc:mga05p37_101925_c1 nmdc:mga05p37_101925_c1_2130_2990 284
64 3300050511 nmdc:mga08y16_37_c1 nmdc:mga08y16_37_c1_48339_49199 284
65 3300059421 Ga0590071_007355 Ga0590071_007355_671_1531 284
66 iso_pu_bacteria 8011350971 8011354045 284
67 3300009553 Ga0105249_10115276 Ga0105249_101152762 285
68 3300046459 Ga0495629_0051798 Ga0495629_0051798_283_1179 285
69 3300046472 Ga0495580_0042275 Ga0495580_0042275_1967_2863 285
70 3300046473 Ga0495582_0028969 Ga0495582_0028969_564_1460 285
71 3300046663 Ga0495635_0144371 Ga0495635_0144371_428_1324 285
72 3300046683 Ga0495658_0001944 Ga0495658_0001944_9011_9907 285
73 3300046689 Ga0495613_0210061 Ga0495613_0210061_12_908 285
74 3300003752 Ga0055539_1000248 Ga0055539_100024832 286
75 3300003756 Ga0055533_1000102 Ga0055533_100010254 286
76 3300003759 Ga0055525_1001166 Ga0055525_10011662 286
77 3300005330 Ga0070690_100041079 Ga0070690_1000410794 286
78 3300005336 Ga0070680_100428577 Ga0070680_1004285771 286
79 3300005434 Ga0070709_10033695 Ga0070709_100336952 286
80 3300005518 Ga0070699_100005981 Ga0070699_1000059818 286
81 3300005539 Ga0068853_100484822 Ga0068853_1004848221 286
82 3300005563 Ga0068855_100000820 Ga0068855_10000082039 286
83 3300005563 Ga0068855_100338092 Ga0068855_1003380922 286
84 3300005577 Ga0068857_100304127 Ga0068857_1003041272 286
85 3300005719 Ga0068861_100117019 Ga0068861_1001170193 286
86 3300009093 Ga0105240_10082577 Ga0105240_100825774 286
87 3300011119 Ga0105246_10377113 Ga0105246_103771132 286
88 3300025226 Ga0209674_100015 Ga0209674_10001576 286
89 3300025230 Ga0209563_100017 Ga0209563_100017173 286
90 3300025231 Ga0207427_100251 Ga0207427_10025115 286
91 3300025253 Ga0209677_100022 Ga0209677_100022329 286
92 3300025256 Ga0209759_1012575 Ga0209759_10125753 286
93 3300025940 Ga0207691_10208842 Ga0207691_102088422 286
94 3300025949 Ga0207667_10000792 Ga0207667_1000079211 286
95 3300025949 Ga0207667_10655537 Ga0207667_106555371 286
96 3300026116 Ga0207674_10243559 Ga0207674_102435592 286
97 3300026118 Ga0207675_100117723 Ga0207675_1001177233 286
98 3300031727 Ga0316576_10414812 Ga0316576_104148121 286
99 3300032002 Ga0307416_100107812 Ga0307416_1001078123 286
100 3300032004 Ga0307414_10402454 Ga0307414_104024541 286
101 3300034820 Ga0373959_0017445 Ga0373959_0017445_205_1098 286
102 3300035086 Ga0373934_0002291 Ga0373934_0002291_5254_6147 286
103 3300035398 Ga0316574_0242246 Ga0316574_0242246_41_943 286
104 3300039438 Ga0436360_0392249 Ga0436360_0392249_804_1694 286
105 3300044656 Ga0466969_0005725 Ga0466969_0005725_4572_5474 286
106 3300044683 Ga0466965_0007539 Ga0466965_0007539_3176_4078 286
107 3300044684 Ga0466966_0004445 Ga0466966_0004445_5843_6745 286
108 3300044694 Ga0466963_0120779 Ga0466963_0120779_734_1627 286
109 3300044719 Ga0466971_0028737 Ga0466971_0028737_990_1892 286
110 3300044765 Ga0466970_0046422 Ga0466970_0046422_188_1090 286
111 3300044842 Ga0466957_0011127 Ga0466957_0011127_1647_2549 286
112 3300045049 Ga0466959_0036974 Ga0466959_0036974_1242_2144 286
113 3300045976 Ga0466967_0284545 Ga0466967_0284545_220_1122 286
114 3300046458 Ga0495591_008610 Ga0495591_008610_898_1761 286
115 3300046501 Ga0495607_0016531 Ga0495607_0016531_2422_3285 286
116 3300046506 Ga0495583_0000071 Ga0495583_0000071_100776_101669 286
117 3300046506 Ga0495583_0023383 Ga0495583_0023383_57_920 286
118 3300046507 Ga0495606_0002590 Ga0495606_0002590_6031_6924 286
119 3300046518 Ga0495631_0010358 Ga0495631_0010358_1476_2339 286
120 3300046520 Ga0495637_0017425 Ga0495637_0017425_158_1030 286
121 3300046522 Ga0495643_0014716 Ga0495643_0014716_1439_2302 286
122 3300046524 Ga0495648_0019333 Ga0495648_0019333_1611_2474 286
123 3300046530 Ga0495654_0009901 Ga0495654_0009901_1633_2496 286
124 3300046616 Ga0495668_0018229 Ga0495668_0018229_703_1566 286
125 3300046648 Ga0495611_0008526 Ga0495611_0008526_1318_2181 286
126 3300046660 Ga0495625_0003993 Ga0495625_0003993_8848_9741 286
127 3300046692 Ga0495671_0011704 Ga0495671_0011704_1520_2383 286
128 3300046694 Ga0495649_0005376 Ga0495649_0005376_6278_7171 286
129 3300046794 Ga0495589_0005050 Ga0495589_0005050_1033_1926 286
130 3300046810 Ga0495660_0025611 Ga0495660_0025611_54_926 286
131 3300047469 Ga0495673_0019395 Ga0495673_0019395_2374_3246 286
132 3300047469 Ga0495673_0024494 Ga0495673_0024494_1122_1985 286
133 3300049459 Ga0495678_004373 Ga0495678_004373_4810_5682 286
134 3300049459 Ga0495678_014959 Ga0495678_014959_1213_2076 286
135 3300049571 Ga0501034_0025238 Ga0501034_0025238_4849_5709 286
136 3300049573 Ga0501037_0093764 Ga0501037_0093764_951_1811 286
137 3300049575 Ga0501039_0035933 Ga0501039_0035933_2288_3148 286
138 3300053093 Ga0500651_0128247 Ga0500651_0128247_284_1177 286
139 3300053122 Ga0500608_028076 Ga0500608_028076_763_1656 286
140 iso_pu_bacteria 2524023250 2524612374 286
141 3300003578 Ga0006562J51391_1023233 Ga0006562J51391_10232331 287
142 3300003578 Ga0006562J51391_1023235 Ga0006562J51391_10232353 287
143 3300003781 Ga0055536_1003108 Ga0055536_10031088 287
144 3300003781 Ga0055536_1003641 Ga0055536_10036416 287
145 3300005289 Ga0065704_10003677 Ga0065704_100036776 287
146 3300005289 Ga0065704_10072175 Ga0065704_100721758 287
147 3300006195 Ga0075366_10201842 Ga0075366_102018421 287
148 3300009011 Ga0105251_10016646 Ga0105251_100166463 287
149 3300009036 Ga0105244_10013609 Ga0105244_100136093 287
150 3300009036 Ga0105244_10018343 Ga0105244_100183433 287
151 3300009036 Ga0105244_10021850 Ga0105244_100218503 287
152 3300009092 Ga0105250_10027501 Ga0105250_100275012 287
153 3300009092 Ga0105250_10031145 Ga0105250_100311452 287
154 3300009148 Ga0105243_10051139 Ga0105243_100511392 287
155 3300013102 Ga0157371_10004927 Ga0157371_100049277 287
156 3300013104 Ga0157370_10052690 Ga0157370_100526903 287
157 3300013104 Ga0157370_10072473 Ga0157370_100724732 287
158 3300025292 Ga0209676_1000474 Ga0209676_100047413 287
159 3300025292 Ga0209676_1000946 Ga0209676_100094624 287
160 3300025292 Ga0209676_1008797 Ga0209676_10087973 287
161 3300025298 Ga0209050_1005221 Ga0209050_10052218 287
162 3300025304 Ga0209257_1001226 Ga0209257_10012264 287
163 3300025711 Ga0207696_1000081 Ga0207696_1000081143 287
164 3300025711 Ga0207696_1011633 Ga0207696_10116333 287
165 3300025728 Ga0207655_1000530 Ga0207655_10005308 287
166 3300025728 Ga0207655_1002985 Ga0207655_10029858 287
167 3300025728 Ga0207655_1024962 Ga0207655_10249623 287
168 3300025728 Ga0207655_1038802 Ga0207655_10388022 287
169 3300025735 Ga0207713_1002570 Ga0207713_10025709 287
170 3300025735 Ga0207713_1003886 Ga0207713_10038866 287
171 3300025735 Ga0207713_1012580 Ga0207713_10125803 287
172 3300025735 Ga0207713_1031191 Ga0207713_10311911 287
173 3300027296 Ga0209389_1001707 Ga0209389_10017072 287
174 3300027312 Ga0209371_1000615 Ga0209371_100061512 287
175 3300030500 Ga0268256_1000528 Ga0268256_100052815 287
176 3300031548 Ga0307408_100069525 Ga0307408_1000695253 287
177 3300031727 Ga0316576_10123978 Ga0316576_101239782 287
178 3300031824 Ga0307413_10144829 Ga0307413_101448292 287
179 3300031852 Ga0307410_10040516 Ga0307410_100405162 287
180 3300031901 Ga0307406_10007071 Ga0307406_100070714 287
181 3300031911 Ga0307412_10006069 Ga0307412_100060692 287
182 3300031995 Ga0307409_100129719 Ga0307409_1001297192 287
183 3300036712 Ga0316584_0018794 Ga0316584_0018794_940_1845 287
184 3300042006 Ga0439432_005492 Ga0439432_005492_1811_2674 287
185 3300042136 Ga0450900_002794 Ga0450900_002794_635_1630 287
186 3300042533 Ga0450901_000664 Ga0450901_000664_964_1959 287
187 3300046453 Ga0495627_001983 Ga0495627_001983_2876_3739 287
188 3300046515 Ga0495620_0000083 Ga0495620_0000083_60862_61725 287
189 3300046518 Ga0495631_0007693 Ga0495631_0007693_1779_2642 287
190 3300046519 Ga0495632_0015862 Ga0495632_0015862_2800_3663 287
191 3300046519 Ga0495632_0016540 Ga0495632_0016540_1509_2372 287
192 3300046522 Ga0495643_0004357 Ga0495643_0004357_1681_2544 287
193 3300046522 Ga0495643_0007246 Ga0495643_0007246_5926_6789 287
194 3300046524 Ga0495648_0018439 Ga0495648_0018439_1613_2476 287
195 3300046530 Ga0495654_0011365 Ga0495654_0011365_2412_3275 287
196 3300046692 Ga0495671_0022837 Ga0495671_0022837_2275_3138 287
197 3300046694 Ga0495649_0000179 Ga0495649_0000179_17026_17964 287
198 3300047320 Ga0495672_0013567 Ga0495672_0013567_1914_2777 287
199 3300048913 Ga0496110_0307141 Ga0496110_0307141_347_1297 287
200 3300048914 Ga0496111_0129454 Ga0496111_0129454_861_1724 287
201 3300048917 Ga0496114_0039393 Ga0496114_0039393_1583_2449 287
202 3300048919 Ga0496116_0008334 Ga0496116_0008334_7048_7986 287
203 3300048919 Ga0496116_0070006 Ga0496116_0070006_22_897 287
204 3300048920 Ga0496117_0020333 Ga0496117_0020333_1685_2560 287
205 3300048920 Ga0496117_0023132 Ga0496117_0023132_1632_2495 287
206 3300048920 Ga0496117_0214141 Ga0496117_0214141_136_999 287
207 3300048921 Ga0496118_0020859 Ga0496118_0020859_2633_3496 287
208 3300048921 Ga0496118_0091875 Ga0496118_0091875_69_932 287
209 3300048922 Ga0496119_0047431 Ga0496119_0047431_240_1103 287
210 3300048922 Ga0496119_0231946 Ga0496119_0231946_60_923 287
211 3300048925 Ga0496122_0004029 Ga0496122_0004029_10285_11148 287
212 3300048925 Ga0496122_0042438 Ga0496122_0042438_1231_2094 287
213 3300048925 Ga0496122_0057421 Ga0496122_0057421_925_1863 287
214 3300048926 Ga0496123_0001489 Ga0496123_0001489_17460_18323 287
215 3300048926 Ga0496123_0006174 Ga0496123_0006174_8346_9296 287
216 3300048926 Ga0496123_0027076 Ga0496123_0027076_1289_2152 287
217 3300048927 Ga0496124_0009003 Ga0496124_0009003_1659_2522 287
218 3300048927 Ga0496124_0027491 Ga0496124_0027491_243_1106 287
219 3300048927 Ga0496124_0082521 Ga0496124_0082521_243_1106 287
220 3300048927 Ga0496124_0096708 Ga0496124_0096708_1458_2321 287
221 3300048928 Ga0496125_0000294 Ga0496125_0000294_78724_79662 287
222 3300048928 Ga0496125_0000793 Ga0496125_0000793_50557_51420 287
223 3300048928 Ga0496125_0100055 Ga0496125_0100055_1183_2046 287
224 3300048928 Ga0496125_0104173 Ga0496125_0104173_1178_2041 287
225 3300048928 Ga0496125_0208167 Ga0496125_0208167_357_1220 287
226 3300048929 Ga0496126_0018254 Ga0496126_0018254_1108_1971 287
227 3300048929 Ga0496126_0156755 Ga0496126_0156755_151_1014 287
228 3300049571 Ga0501034_0002511 Ga0501034_0002511_19309_20172 287
229 3300049581 Ga0501047_0007491 Ga0501047_0007491_2030_2926 287
230 3300049823 Ga0501044_0057471 Ga0501044_0057471_115_1011 287
231 3300053088 Ga0500644_0002229 Ga0500644_0002229_1497_2435 287
232 3300053093 Ga0500651_0001577 Ga0500651_0001577_7168_8106 287
233 3300053093 Ga0500651_0014399 Ga0500651_0014399_1503_2447 287
234 3300053135 Ga0500659_0015206 Ga0500659_0015206_2113_2976 287
235 3300053140 Ga0500573_0022419 Ga0500573_0022419_731_1669 287
236 3300013105 Ga0157369_10448376 Ga0157369_104483762 288
237 3300037418 Ga0395900_0179864 Ga0395900_0179864_732_1691 288
238 3300048921 Ga0496118_0153317 Ga0496118_0153317_276_1142 288
239 3300048927 Ga0496124_0132539 Ga0496124_0132539_524_1390 288
240 3300049578 Ga0501042_0041929 Ga0501042_0041929_1210_2217 288
241 3300053148 Ga0500590_009700 Ga0500590_009700_3400_4299 288
242 iso_pu_bacteria 2842775625 2842779883 288
243 iso_pu_bacteria 2894772417 2894772791 288
244 iso_pu_bacteria 2929199973 2929203574 288
245 iso_pu_bacteria 8055909800 8055911235 288
246 3300006846 Ga0075430_100029850 Ga0075430_1000298502 289
247 3300028800 Ga0265338_10002911 Ga0265338_1000291114 289
248 3300031239 Ga0265328_10005063 Ga0265328_100050632 289
249 3300031240 Ga0265320_10003501 Ga0265320_100035017 289
250 3300031240 Ga0265320_10009751 Ga0265320_100097517 289
251 3300031249 Ga0265339_10010457 Ga0265339_100104574 289
252 3300031711 Ga0265314_10012839 Ga0265314_100128392 289
253 3300031712 Ga0265342_10000398 Ga0265342_1000039828 289
254 3300031712 Ga0265342_10001645 Ga0265342_1000164512 289
255 3300036401 Ga0373937_0126580 Ga0373937_0126580_960_1862 289
256 3300039450 Ga0436363_1013231 Ga0436363_1013231_227_1198 289
257 3300041486 Ga0451807_0495322 Ga0451807_0495322_712_1641 289
258 3300041512 Ga0451853_1035559 Ga0451853_1035559_9078_10007 289
259 3300046558 Ga0495633_0000346 Ga0495633_0000346_8283_9239 289
260 3300049574 Ga0501038_0003838 Ga0501038_0003838_8240_9187 289
261 3300049583 Ga0501067_0067274 Ga0501067_0067274_321_1259 289
262 3300049586 Ga0501070_0264183 Ga0501070_0264183_418_1365 289
263 3300049588 Ga0501072_0113132 Ga0501072_0113132_54_977 289
264 3300049590 Ga0501074_0001622 Ga0501074_0001622_4089_5036 289
265 3300049824 Ga0501045_0388025 Ga0501045_0388025_92_1015 289
266 3300050509 nmdc:mga0qj67_455726_c1 nmdc:mga0qj67_455726_c1_14_934 289
267 3300003187 JGI25151J46595_10002386 JGI25151J46595_1000238610 290
268 3300003203 JGI25406J46586_10007637 JGI25406J46586_100076373 290
269 3300003203 JGI25406J46586_10012538 JGI25406J46586_100125383 290
270 3300003771 Ga0055526_1009479 Ga0055526_10094795 290
271 3300003771 Ga0055526_1015013 Ga0055526_10150133 290
272 3300003781 Ga0055536_1000134 Ga0055536_100013447 290
273 3300005329 Ga0070683_100216025 Ga0070683_1002160251 290
274 3300005458 Ga0070681_10148006 Ga0070681_101480062 290
275 3300005535 Ga0070684_100064461 Ga0070684_1000644612 290
276 3300005985 Ga0081539_10000076 Ga0081539_10000076183 290
277 3300021384 Ga0213876_10077706 Ga0213876_100777062 290
278 3300021388 Ga0213875_10013221 Ga0213875_100132213 290
279 3300021388 Ga0213875_10095221 Ga0213875_100952212 290
280 3300021441 Ga0213871_10003598 Ga0213871_100035982 290
281 3300025284 Ga0209130_1020807 Ga0209130_10208072 290
282 3300025291 Ga0209675_1000191 Ga0209675_100019113 290
283 3300025292 Ga0209676_1000036 Ga0209676_1000036393 290
284 3300025294 Ga0209025_1001806 Ga0209025_100180619 290
285 3300025294 Ga0209025_1002048 Ga0209025_100204813 290
286 3300025294 Ga0209025_1023224 Ga0209025_10232242 290
287 3300025295 Ga0209564_1002275 Ga0209564_100227516 290
288 3300025295 Ga0209564_1004020 Ga0209564_10040209 290
289 3300025299 Ga0209256_1001334 Ga0209256_100133423 290
290 3300025303 Ga0209051_1024601 Ga0209051_10246012 290
291 3300025906 Ga0207699_10256731 Ga0207699_102567311 290
292 3300025912 Ga0207707_10103336 Ga0207707_101033363 290
293 3300025944 Ga0207661_10129554 Ga0207661_101295542 290
294 3300028800 Ga0265338_10287145 Ga0265338_102871451 290
295 3300031995 Ga0307409_100393095 Ga0307409_1003930952 290
296 3300032002 Ga0307416_100185962 Ga0307416_1001859622 290
297 3300035724 Ga0373933_0133097 Ga0373933_0133097_559_1515 290
298 3300036401 Ga0373937_0072796 Ga0373937_0072796_981_1928 290
299 3300037853 Ga0436364_0388964 Ga0436364_0388964_2430_3392 290
300 3300037853 Ga0436364_0807347 Ga0436364_0807347_25341_26276 290
301 3300037853 Ga0436364_1480454 Ga0436364_1480454_299_1249 290
302 3300039437 Ga0436365_0106047 Ga0436365_0106047_2244_3206 290
303 3300039437 Ga0436365_0200119 Ga0436365_0200119_1002_1973 290
304 3300039438 Ga0436360_1245879 Ga0436360_1245879_6073_7047 290
305 3300039447 Ga0436361_0908761 Ga0436361_0908761_496_1470 290
306 3300039450 Ga0436363_0440276 Ga0436363_0440276_1068_2039 290
307 3300039450 Ga0436363_0907193 Ga0436363_0907193_892_1854 290
308 3300039453 Ga0436362_0735911 Ga0436362_0735911_2742_3716 290
309 3300045976 Ga0466967_0170928 Ga0466967_0170928_792_1685 290
310 3300046511 Ga0495608_0215881 Ga0495608_0215881_108_1055 290
311 3300046517 Ga0495630_0126460 Ga0495630_0126460_836_1783 290
312 3300046543 Ga0495645_0250596 Ga0495645_0250596_101_1048 290
313 3300049589 Ga0501073_0000378 Ga0501073_0000378_18635_19546 290

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05726

Pirin_C

Pirin C-terminal cupin domain

219

318

0.97

PF02678

Pirin

Pirin

60

166

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7tfq-assembly1.cif.gz_A crystal structure of the pirin family protein redox-sensitive bicupin yhak bound to copper ion from yersinia pestis 0.9466 1 274
6d0g-assembly1.cif.gz_A 1.78 angstrom resolution crystal structure of quercetin 2,3-dioxygenase from acinetobacter baumannii 0.9348 6 290
6d0p-assembly4.cif.gz_D 1.88 angstrom resolution crystal structure of quercetin 2,3-dioxygenase from acinetobacter baumannii 0.9313 1 274
6d0g-assembly1.cif.gz_A 1.78 angstrom resolution crystal structure of quercetin 2,3-dioxygenase from acinetobacter baumannii 0.9161 6 290
7tfq-assembly1.cif.gz_A crystal structure of the pirin family protein redox-sensitive bicupin yhak bound to copper ion from yersinia pestis 0.9114 1 274
ID Description Score Start End Superfamily
af_C0P2Q1_61_325_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8994 11 273 2.60.120.10
af_Q5M827_137_273_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8957 143 270 2.60.120.10
4oi2A01 Mainly Beta;Sandwich;Jelly Rolls;Clp1, DNA binding domain 0.8898 176 240 2.60.120.1030
af_Q9D711_137_245_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8858 143 243 2.60.120.10
af_A0A0R0EY21_77_180_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8778 145 242 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A5E6QY55-F1-model_v4 Pirin N-terminal domain-containing protein 0.998 44 145
AF-A0A536TC78-F1-model_v4 Pirin family protein 0.994 31 289 GO:0046872
AF-A0A562BFY3-F1-model_v4 Pirin-related protein 0.993 1 290 GO:0046872
AF-I3V0U2-F1-model_v4 Pirin domain-containing protein 0.9919 37 288 GO:0046872
AF-A0A536ZHH5-F1-model_v4 Pirin family protein 0.9913 3 289

Feature Viewer

pLDDT pTM Quality
96.1 0.92 High
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Predicted Structure (AlphaFold2)

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