F401960

General Info

Members Datasets Scaffolds Average Seq Length
312 213 624 426

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006393351|3006393850
Length 475
Sequence TAAPGTAPETRHASSGVALVQGGRGNRMLVTFLLGALTATTPLAMDMYLPSLPEVTRALHAPAATVQLTLTACLAGMALGQLVVGPMSDRWGRRRPLLTGLGVYVVATALCAFAPDVETLVAFRLAQGLAGAAGIVIARAVVRDLYDGVAMARFFSTLMLISGTAPIIAPLIGGQILRFTDWRGVFVVLTGIGAVLTALVWWRLPETLAPSERHRGGVGESLRTMRGLLADLPFTGYMLAGGFAFAALFAYVSASPFVVQEVYGASPQTFSLLFGLNSVGLVAAGQINGKLLVGRVRLDRVFACGLTVIVLAATALLLMSTGVFGRVGLVPVAAALFVLMSAMGFTLPNAQSLALLRTRHAAGSGSALLGTSSFLIGAVASPLVGIAGERTAVPMAVVQLSGALVAAACFVGLVRPWRTAETRLTEPKPAEARTADAITAAPKPAEATTADAITTAPKPTAPKPTAPNPADTPTH

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
5 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
6 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
7 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
8 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
9 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
10 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
11 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
12 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
13 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
14 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
16 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
17 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
18 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
19 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
20 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
21 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
22 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
23 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
24 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
25 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
26 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
27 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
28 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
29 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
30 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
31 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
32 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
33 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
34 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
35 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
36 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
37 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
38 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
39 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
40 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
41 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
42 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
43 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
44 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
45 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
46 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
47 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
48 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
49 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
50 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
51 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
52 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
53 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
54 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
55 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
56 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
57 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
58 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
59 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
60 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
61 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
62 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
63 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
64 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
65 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
66 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
67 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
68 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
69 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
70 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
71 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
72 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
75 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
76 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
77 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
78 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
79 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
80 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
81 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
85 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
86 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
87 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
88 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
89 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
90 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
91 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
92 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
93 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
94 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
95 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
98 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
99 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
100 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
101 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
102 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
103 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
133 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
134 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
135 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
136 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
137 3300053113 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 endosphere Metagenome Endosphere
138 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
139 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
140 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
145 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
146 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
147 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
148 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
149 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
150 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
151 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
152 2643221647 Streptomyces sp. Root369 Isolate Unclassified
153 2643221670 Streptomyces sp. Root431 Isolate Unclassified
154 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
155 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
156 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
157 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
158 2643221714 Streptomyces sp. Root264 Isolate Unclassified
159 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
160 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
161 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
162 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
163 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
164 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
165 2808606448 Streptomyces sp. 193411 Isolate Unclassified
166 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
167 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
168 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
169 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
170 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
171 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
172 2862574272 Streptomyces sp. AcE210 Isolate Nodule
173 2867428634 Streptomyces sp. RP5T Isolate Unclassified
174 2867475112 Streptomyces sp. TM32 Isolate Unclassified
175 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
176 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
177 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
178 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
179 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
180 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
181 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
182 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
183 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
184 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
185 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
186 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
187 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
188 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
189 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
190 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
191 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
192 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
193 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
194 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
195 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
196 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
197 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
198 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
199 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
200 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
201 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
202 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
203 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
204 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
205 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
206 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
207 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
208 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
209 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
210 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
211 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
212 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
213 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.24
Metatranscriptomes 0.64
Isolates 22.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.81
Nodule 0.96
Rhizoplane 0.32
Rhizosphere 78.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10006859 3300003316 Bacteria 13246
2 Ga0006562J51391_1020726 3300003578 Bacteria 7060
3 Ga0006562J51391_1020728 3300003578 Bacteria 7060
4 Ga0070667_100034926 3300005367 Bacteria 4210
5 Ga0068853_100041404 3300005539 Bacteria 3935
6 Ga0068856_100187556 3300005614 Bacteria 2082
7 Ga0075367_10050037 3300006178 Bacteria 2466
8 Ga0099826_10082065 3300006948 Bacteria 2004
9 Ga0105246_10018924 3300011119 Bacteria 4393
10 Ga0182008_10003841 3300014497 Bacteria 8930
11 Ga0182007_10001125 3300015262 Bacteria 14497
12 Ga0183367_1009 3300015688 Bacteria 484598
13 Ga0209758_1016166 3300025297 Bacteria 3806
14 Ga0207426_1006726 3300025302 Bacteria 4927
15 Ga0207426_1012677 3300025302 Bacteria 3158
16 Ga0207426_1016404 3300025302 Bacteria 2660
17 Ga0207658_10042159 3300025986 Bacteria 3309
18 Ga0307517_10005397 3300028786 Bacteria 19296
19 Ga0307517_10007511 3300028786 Bacteria 15855
20 Ga0307515_10000140 3300028794 Bacteria 172330
21 Ga0307511_10007606 3300030521 Bacteria 10893
22 Ga0307511_10125854 3300030521 Bacteria 1564
23 Ga0307512_10033495 3300030522 Bacteria 4416
24 Ga0307513_10033264 3300031456 Bacteria 5796
25 Ga0307508_10018356 3300031616 Bacteria 6359
26 Ga0307508_10049238 3300031616 Bacteria 3753
27 Ga0307508_10062340 3300031616 Bacteria 3291
28 Ga0307508_10062832 3300031616 Bacteria 3277
29 Ga0307508_10168365 3300031616 Bacteria 1794
30 Ga0307514_10019260 3300031649 Bacteria 5587
31 Ga0307516_10016841 3300031730 Bacteria 7631
32 Ga0307516_10022381 3300031730 Bacteria 6492
33 Ga0307518_10091789 3300031838 Bacteria 2184
34 Ga0307507_10014616 3300033179 Bacteria 9335
35 Ga0307507_10043296 3300033179 Bacteria 4469
36 Ga0307510_10019305 3300033180 Bacteria 7998
37 Ga0307510_10063927 3300033180 Bacteria 3741
38 Ga0439455_0000157 3300042012 Bacteria 7550
39 Ga0450894_000039 3300042131 Bacteria 19335
40 Ga0450898_000122 3300042134 Bacteria 7515
41 Ga0450902_002400 3300042137 Bacteria 2654
42 Ga0450903_000679 3300042138 Bacteria 6789
43 Ga0450908_004373 3300042184 Bacteria 2725
44 Ga0466969_0015464 3300044656 Bacteria 4000
45 Ga0466972_0002605 3300044658 Bacteria 8940
46 Ga0466972_0046721 3300044658 Bacteria 2095
47 Ga0466965_0019255 3300044683 Bacteria 3277
48 Ga0466966_0058563 3300044684 Bacteria 2434
49 Ga0466961_0060353 3300044693 Bacteria 2411
50 Ga0466970_0003708 3300044765 Bacteria 7467
51 Ga0466970_0005454 3300044765 Bacteria 6311
52 Ga0466960_0003237 3300044901 Bacteria 6243
53 Ga0495592_0014518 3300046454 Bacteria 5975
54 Ga0495592_0016587 3300046454 Bacteria 5590
55 Ga0495592_0022844 3300046454 Bacteria 4758
56 Ga0495603_0002258 3300046455 Bacteria 11318
57 Ga0495590_0023036 3300046457 Bacteria 2201
58 Ga0495629_0002797 3300046459 Bacteria 13304
59 Ga0495629_0016637 3300046459 Bacteria 5278
60 Ga0495629_0017114 3300046459 Bacteria 5199
61 Ga0495629_0067427 3300046459 Bacteria 2497
62 Ga0495638_0049179 3300046460 Bacteria 2636
63 Ga0495651_0005582 3300046462 Bacteria 9588
64 Ga0495651_0018372 3300046462 Bacteria 5415
65 Ga0495651_0105991 3300046462 Bacteria 2084
66 Ga0495582_0026956 3300046473 Bacteria 3149
67 Ga0495605_0023627 3300046474 Bacteria 3228
68 Ga0495662_0000917 3300046476 Bacteria 14422
69 Ga0495662_0003112 3300046476 Bacteria 8366
70 Ga0495664_0007590 3300046477 Bacteria 6029
71 Ga0495664_0045015 3300046477 Bacteria 2616
72 Ga0495585_0002793 3300046492 Bacteria 12164
73 Ga0495585_0027264 3300046492 Bacteria 3260
74 Ga0495594_0000580 3300046499 Bacteria 18813
75 Ga0495594_0015479 3300046499 Bacteria 4007
76 Ga0495594_0045908 3300046499 Bacteria 2399
77 Ga0495596_0017614 3300046500 Bacteria 2955
78 Ga0495607_0039217 3300046501 Bacteria 2830
79 Ga0495583_0043617 3300046506 Bacteria 2087
80 Ga0495606_0068170 3300046507 Bacteria 2251
81 Ga0495616_0004368 3300046513 Bacteria 8920
82 Ga0495618_0019966 3300046514 Bacteria 4124
83 Ga0495620_0012312 3300046515 Bacteria 4427
84 Ga0495620_0013145 3300046515 Bacteria 4249
85 Ga0495628_0020010 3300046516 Bacteria 5526
86 Ga0495628_0027268 3300046516 Bacteria 4650
87 Ga0495628_0041202 3300046516 Bacteria 3687
88 Ga0495630_0016250 3300046517 Bacteria 5437
89 Ga0495631_0002534 3300046518 Bacteria 10263
90 Ga0495643_0005578 3300046522 Bacteria 8469
91 Ga0495643_0007084 3300046522 Bacteria 7278
92 Ga0495666_0029211 3300046526 Bacteria 2712
93 Ga0495652_0035231 3300046529 Bacteria 4357
94 Ga0495640_0015982 3300046533 Bacteria 5629
95 Ga0495586_0036538 3300046535 Bacteria 2637
96 Ga0495587_0001978 3300046536 Bacteria 13676
97 Ga0495609_0014151 3300046538 Bacteria 3756
98 Ga0495645_0048087 3300046543 Bacteria 3107
99 Ga0495622_0003410 3300046557 Bacteria 7495
100 Ga0495622_0011923 3300046557 Bacteria 4020
101 Ga0495622_0051879 3300046557 Bacteria 1902
102 Ga0495633_0016344 3300046558 Bacteria 3828
103 Ga0495656_0052094 3300046615 Bacteria 1754
104 Ga0495668_0063290 3300046616 Bacteria 2037
105 Ga0495634_0003098 3300046642 Bacteria 13516
106 Ga0495634_0008464 3300046642 Bacteria 7654
107 Ga0495634_0025818 3300046642 Bacteria 4103
108 Ga0495611_0088125 3300046648 Bacteria 1432
109 Ga0495625_0097339 3300046660 Bacteria 2025
110 Ga0495625_0159335 3300046660 Bacteria 1513
111 Ga0495635_0000395 3300046663 Bacteria 27854
112 Ga0495588_0033999 3300046674 Bacteria 2578
113 Ga0495588_0035302 3300046674 Bacteria 2533
114 Ga0495588_0037565 3300046674 Bacteria 2461
115 Ga0495588_0063292 3300046674 Bacteria 1918
116 Ga0495657_0002911 3300046675 Bacteria 14208
117 Ga0495657_0024171 3300046675 Bacteria 4331
118 Ga0495657_0056916 3300046675 Bacteria 2601
119 Ga0495599_0028109 3300046678 Bacteria 3524
120 Ga0495623_0080356 3300046679 Bacteria 2018
121 Ga0495646_0005161 3300046680 Bacteria 8239
122 Ga0495658_0035263 3300046683 Bacteria 2751
123 Ga0495658_0082633 3300046683 Bacteria 1887
124 Ga0495613_0011577 3300046689 Bacteria 6557
125 Ga0495613_0017064 3300046689 Bacteria 5405
126 Ga0495613_0021093 3300046689 Bacteria 4857
127 Ga0495613_0027783 3300046689 Bacteria 4210
128 Ga0495624_0033245 3300046690 Bacteria 3340
129 Ga0495649_0012577 3300046694 Bacteria 4914
130 Ga0495589_0004133 3300046794 Bacteria 7766
131 Ga0495589_0017590 3300046794 Bacteria 3668
132 Ga0495589_0040592 3300046794 Bacteria 2323
133 Ga0495600_0018949 3300046809 Bacteria 4392
134 Ga0495600_0084337 3300046809 Bacteria 2073
135 Ga0495581_0033846 3300047315 Bacteria 2957
136 Ga0495581_0072041 3300047315 Bacteria 1999
137 Ga0495604_0000156 3300047317 Bacteria 59760
138 Ga0495604_0018097 3300047317 Bacteria 5640
139 Ga0495604_0154571 3300047317 Bacteria 1626
140 Ga0495636_0008097 3300047318 Bacteria 4142
141 Ga0495636_0018204 3300047318 Bacteria 2817
142 Ga0495636_0098453 3300047318 Bacteria 1276
143 Ga0495676_0004109 3300047321 Bacteria 13267
144 Ga0495676_0006340 3300047321 Bacteria 10896
145 Ga0495676_0007331 3300047321 Bacteria 10121
146 Ga0495676_0116988 3300047321 Bacteria 1945
147 Ga0495687_001537 3300047443 Bacteria 20988
148 Ga0495687_002316 3300047443 Bacteria 15523
149 Ga0495687_024949 3300047443 Bacteria 2834
150 Ga0495675_0005079 3300047444 Bacteria 8012
151 Ga0495675_0022688 3300047444 Bacteria 4002
152 Ga0495675_0029135 3300047444 Bacteria 3520
153 Ga0495685_010471 3300047447 Bacteria 3111
154 Ga0495685_010780 3300047447 Bacteria 3072
155 Ga0495685_028116 3300047447 Bacteria 1934
156 Ga0495681_0001106 3300047470 Bacteria 20474
157 Ga0495681_0005591 3300047470 Bacteria 8389
158 Ga0495681_0022174 3300047470 Bacteria 3405
159 Ga0495681_0044229 3300047470 Bacteria 2142
160 Ga0495684_0100198 3300047471 Bacteria 2190
161 Ga0495686_0027663 3300047472 Bacteria 3701
162 Ga0495686_0038717 3300047472 Bacteria 3048
163 Ga0495686_0062611 3300047472 Bacteria 2307
164 Ga0495593_0000879 3300047673 Bacteria 17427
165 Ga0495602_0060513 3300048088 Bacteria 3299
166 Ga0495614_0008463 3300048089 Bacteria 4574
167 Ga0495626_0008772 3300048091 Bacteria 5503
168 Ga0495682_0017362 3300049460 Bacteria 2717
169 Ga0501031_0018649 3300049568 Bacteria 4518
170 Ga0501031_0036950 3300049568 Bacteria 3187
171 Ga0501031_0068413 3300049568 Bacteria 2313
172 Ga0501032_0006763 3300049569 Bacteria 8416
173 Ga0501032_0008412 3300049569 Bacteria 7525
174 Ga0501033_0003465 3300049570 Bacteria 12950
175 Ga0501033_0017137 3300049570 Bacteria 5475
176 Ga0501033_0029815 3300049570 Bacteria 4100
177 Ga0501034_0007202 3300049571 Bacteria 11873
178 Ga0501034_0007457 3300049571 Bacteria 11641
179 Ga0501034_0025141 3300049571 Bacteria 6061
180 Ga0501034_0072509 3300049571 Bacteria 3452
181 Ga0501036_0001380 3300049572 Bacteria 18652
182 Ga0501036_0006934 3300049572 Bacteria 9213
183 Ga0501036_0040873 3300049572 Bacteria 3924
184 Ga0501036_0069032 3300049572 Bacteria 2990
185 Ga0501037_0006873 3300049573 Bacteria 8309
186 Ga0501037_0007170 3300049573 Bacteria 8147
187 Ga0501037_0053215 3300049573 Bacteria 2961
188 Ga0501038_0004829 3300049574 Bacteria 12520
189 Ga0501038_0050000 3300049574 Bacteria 3613
190 Ga0501038_0072578 3300049574 Bacteria 2916
191 Ga0501038_0084486 3300049574 Bacteria 2670
192 Ga0501039_0061152 3300049575 Bacteria 2916
193 Ga0501040_0011396 3300049576 Bacteria 5821
194 Ga0501041_0002572 3300049577 Bacteria 10341
195 Ga0501042_0024237 3300049578 Bacteria 4254
196 Ga0501043_0005114 3300049579 Bacteria 10614
197 Ga0501043_0007938 3300049579 Bacteria 8386
198 Ga0501043_0022497 3300049579 Bacteria 4942
199 Ga0501043_0251368 3300049579 Bacteria 1361
200 Ga0501046_0066760 3300049580 Bacteria 2803
201 Ga0501046_0074739 3300049580 Bacteria 2628
202 Ga0501047_0007853 3300049581 Bacteria 10053
203 Ga0501047_0008019 3300049581 Bacteria 9962
204 Ga0501047_0127434 3300049581 Bacteria 2426
205 Ga0501048_0002985 3300049582 Bacteria 12917
206 Ga0501048_0025854 3300049582 Bacteria 4276
207 Ga0501067_0001661 3300049583 Bacteria 12218
208 Ga0501068_0018026 3300049584 Bacteria 4087
209 Ga0501069_0002683 3300049585 Bacteria 9090
210 Ga0501070_0001456 3300049586 Bacteria 21167
211 Ga0501070_0043173 3300049586 Bacteria 3752
212 Ga0501070_0051880 3300049586 Bacteria 3404
213 Ga0501071_0007991 3300049587 Bacteria 6977
214 Ga0501072_0004424 3300049588 Bacteria 10677
215 Ga0501074_0049107 3300049590 Bacteria 3046
216 Ga0501076_0011888 3300049592 Bacteria 6501
217 Ga0501077_0007492 3300049593 Bacteria 6734
218 Ga0501080_0067626 3300049742 Bacteria 3323
219 Ga0501083_0003237 3300049744 Bacteria 11360
220 Ga0501035_0003129 3300049822 Bacteria 15892
221 Ga0501035_0009167 3300049822 Bacteria 9203
222 Ga0501035_0009796 3300049822 Bacteria 8903
223 Ga0501035_0019580 3300049822 Bacteria 6218
224 Ga0501035_0058695 3300049822 Bacteria 3427
225 Ga0501044_0000770 3300049823 Bacteria 38854
226 Ga0501044_0013479 3300049823 Bacteria 8841
227 Ga0501044_0018154 3300049823 Bacteria 7544
228 Ga0501045_0041548 3300049824 Bacteria 3346
229 nmdc:mga06z11_36886_c1 3300050494 Bacteria 2417
230 nmdc:mga04h51_15529_c1 3300050495 Bacteria 2195
231 Ga0500644_0010471 3300053088 Bacteria 2512
232 Ga0500583_0067152 3300053092 Bacteria 1708
233 Ga0500553_027715 3300053101 Bacteria 2845
234 Ga0500580_032753 3300053113 Bacteria 2203
235 Ga0500561_0000605 3300053137 Bacteria 5755
236 Ga0500573_0020291 3300053140 Bacteria 3806
237 Ga0500573_0027535 3300053140 Bacteria 3269
238 Ga0500633_0009003 3300053160 Bacteria 2603
239 Ga0501084_0007463 3300054114 Bacteria 9014
240 Ga0501082_0016922 3300060353 Bacteria 6278
241 Ga0466962_0006020 3300061719 Bacteria 5832
242 Ga0466962_0017942 3300061719 Bacteria 3405
243 Ga0530510_0100841 3300061734 Bacteria 2111
244 3006393850 3006393351 Bacteria 6615579
245 2554258829 2554235005 Bacteria 6457341
246 2585300082 2582581312 Bacteria 7308206
247 2585311508 2582581313 Bacteria 10042643
248 2585317984 2582581314 Bacteria 11452267
249 2616694449 2616644814 Bacteria 11555299
250 2643944991 2643221587 Bacteria 7586415
251 2644267660 2643221647 Bacteria 10741251
252 2644385853 2643221670 Bacteria 6497041
253 2644408683 2643221673 Bacteria 9196637
254 2644431890 2643221677 Bacteria 7584031
255 2644435956 2643221678 Bacteria 9540101
256 2644463124 2643221682 Bacteria 6743283
257 2644632186 2643221714 Bacteria 9015452
258 2784587556 2784132148 Bacteria 8627943
259 2785368096 2784746768 Bacteria 10036182
260 2786669149 2786546132 Bacteria 10419719
261 2793982923 2791355406 Bacteria 11364898
262 2808840753 2808606359 Bacteria 9866990
263 2808919350 2808606375 Bacteria 9466072
264 2809231120 2808606448 Bacteria 8656184
265 2811847771 2808606982 Bacteria 7791042
266 2812481569 2811994917 Bacteria 7761064
267 2862182776 2862178590 Bacteria 8583590
268 2862288513 2862281513 Bacteria 9621493
269 2862295757 2862290372 Bacteria 7471434
270 2862515135 2862507626 Bacteria 9425308
271 2862582731 2862574272 Bacteria 10567477
272 2867433085 2867428634 Bacteria 9590268
273 2867478314 2867475112 Bacteria 6909112
274 2873156871 2873151551 Bacteria 8625867
275 2877682440 2877676314 Bacteria 9512378
276 2912725321 2912723979 Bacteria 8557534
277 2912759679 2912757875 Bacteria 7940295
278 2918503385 2918501144 Bacteria 8668083
279 2919468302 2919468124 Bacteria 9133025
280 2935396599 2935390628 Bacteria 7043367
281 2946051212 2946045630 Bacteria 8527308
282 2946074737 2946072368 Bacteria 8999607
283 2954004156 2954002825 Bacteria 9173742
284 2954675447 2954673503 Bacteria 9685905
285 2954688685 2954682443 Bacteria 9862841
286 2954698456 2954691527 Bacteria 10720516
287 2954703766 2954701450 Bacteria 10834262
288 2954717437 2954711539 Bacteria 10867210
289 2954727392 2954721474 Bacteria 10456478
290 2954734400 2954731030 Bacteria 10243860
291 2954746296 2954740390 Bacteria 10229294
292 2954753283 2954749733 Bacteria 10366972
293 2954765409 2954759201 Bacteria 9358192
294 2997456187 2997451912 Bacteria 8492419
295 3003003733 3002998708 Bacteria 11715108
296 3006322288 3006321560 Bacteria 8247479
297 3006490244 3006486233 Bacteria 8157040
298 3006501300 3006493962 Bacteria 8825450
299 8008562271 8008558824 Bacteria 10610750
300 8008579909 8008574985 Bacteria 7815457
301 8023627441 8023623736 Bacteria 8593882
302 8025482973 8025478263 Bacteria 8209203
303 8025533687 8025530807 Bacteria 8495698
304 8047899448 8047893842 Bacteria 11723082
305 8048136081 8048127548 Bacteria 11053136
306 8048359482 8048356638 Bacteria 11044339
307 8048376396 8048369669 Bacteria 11666822
308 8048385451 8048379754 Bacteria 11877923
309 8053950771 8053945823 Bacteria 8962862
310 8056450461 8056447290 Bacteria 7680491
311 8056669249 8056667051 Bacteria 6953971
312 8056836599 8056829672 Bacteria 9045328
313 rootH1_10006859
314 Ga0006562J51391_1020726
315 Ga0006562J51391_1020728
316 Ga0070667_100034926
317 Ga0068853_100041404
318 Ga0068856_100187556
319 Ga0075367_10050037
320 Ga0099826_10082065
321 Ga0105246_10018924
322 Ga0182008_10003841
323 Ga0182007_10001125
324 Ga0183367_1009
325 Ga0209758_1016166
326 Ga0207426_1006726
327 Ga0207426_1012677
328 Ga0207426_1016404
329 Ga0207658_10042159
330 Ga0307517_10005397
331 Ga0307517_10007511
332 Ga0307515_10000140
333 Ga0307511_10007606
334 Ga0307511_10125854
335 Ga0307512_10033495
336 Ga0307513_10033264
337 Ga0307508_10018356
338 Ga0307508_10049238
339 Ga0307508_10062340
340 Ga0307508_10062832
341 Ga0307508_10168365
342 Ga0307514_10019260
343 Ga0307516_10016841
344 Ga0307516_10022381
345 Ga0307518_10091789
346 Ga0307507_10014616
347 Ga0307507_10043296
348 Ga0307510_10019305
349 Ga0307510_10063927
350 Ga0439455_0000157
351 Ga0450894_000039
352 Ga0450898_000122
353 Ga0450902_002400
354 Ga0450903_000679
355 Ga0450908_004373
356 Ga0466969_0015464
357 Ga0466972_0002605
358 Ga0466972_0046721
359 Ga0466965_0019255
360 Ga0466966_0058563
361 Ga0466961_0060353
362 Ga0466970_0003708
363 Ga0466970_0005454
364 Ga0466960_0003237
365 Ga0495592_0014518
366 Ga0495592_0016587
367 Ga0495592_0022844
368 Ga0495603_0002258
369 Ga0495590_0023036
370 Ga0495629_0002797
371 Ga0495629_0016637
372 Ga0495629_0017114
373 Ga0495629_0067427
374 Ga0495638_0049179
375 Ga0495651_0005582
376 Ga0495651_0018372
377 Ga0495651_0105991
378 Ga0495582_0026956
379 Ga0495605_0023627
380 Ga0495662_0000917
381 Ga0495662_0003112
382 Ga0495664_0007590
383 Ga0495664_0045015
384 Ga0495585_0002793
385 Ga0495585_0027264
386 Ga0495594_0000580
387 Ga0495594_0015479
388 Ga0495594_0045908
389 Ga0495596_0017614
390 Ga0495607_0039217
391 Ga0495583_0043617
392 Ga0495606_0068170
393 Ga0495616_0004368
394 Ga0495618_0019966
395 Ga0495620_0012312
396 Ga0495620_0013145
397 Ga0495628_0020010
398 Ga0495628_0027268
399 Ga0495628_0041202
400 Ga0495630_0016250
401 Ga0495631_0002534
402 Ga0495643_0005578
403 Ga0495643_0007084
404 Ga0495666_0029211
405 Ga0495652_0035231
406 Ga0495640_0015982
407 Ga0495586_0036538
408 Ga0495587_0001978
409 Ga0495609_0014151
410 Ga0495645_0048087
411 Ga0495622_0003410
412 Ga0495622_0011923
413 Ga0495622_0051879
414 Ga0495633_0016344
415 Ga0495656_0052094
416 Ga0495668_0063290
417 Ga0495634_0003098
418 Ga0495634_0008464
419 Ga0495634_0025818
420 Ga0495611_0088125
421 Ga0495625_0097339
422 Ga0495625_0159335
423 Ga0495635_0000395
424 Ga0495588_0033999
425 Ga0495588_0035302
426 Ga0495588_0037565
427 Ga0495588_0063292
428 Ga0495657_0002911
429 Ga0495657_0024171
430 Ga0495657_0056916
431 Ga0495599_0028109
432 Ga0495623_0080356
433 Ga0495646_0005161
434 Ga0495658_0035263
435 Ga0495658_0082633
436 Ga0495613_0011577
437 Ga0495613_0017064
438 Ga0495613_0021093
439 Ga0495613_0027783
440 Ga0495624_0033245
441 Ga0495649_0012577
442 Ga0495589_0004133
443 Ga0495589_0017590
444 Ga0495589_0040592
445 Ga0495600_0018949
446 Ga0495600_0084337
447 Ga0495581_0033846
448 Ga0495581_0072041
449 Ga0495604_0000156
450 Ga0495604_0018097
451 Ga0495604_0154571
452 Ga0495636_0008097
453 Ga0495636_0018204
454 Ga0495636_0098453
455 Ga0495676_0004109
456 Ga0495676_0006340
457 Ga0495676_0007331
458 Ga0495676_0116988
459 Ga0495687_001537
460 Ga0495687_002316
461 Ga0495687_024949
462 Ga0495675_0005079
463 Ga0495675_0022688
464 Ga0495675_0029135
465 Ga0495685_010471
466 Ga0495685_010780
467 Ga0495685_028116
468 Ga0495681_0001106
469 Ga0495681_0005591
470 Ga0495681_0022174
471 Ga0495681_0044229
472 Ga0495684_0100198
473 Ga0495686_0027663
474 Ga0495686_0038717
475 Ga0495686_0062611
476 Ga0495593_0000879
477 Ga0495602_0060513
478 Ga0495614_0008463
479 Ga0495626_0008772
480 Ga0495682_0017362
481 Ga0501031_0018649
482 Ga0501031_0036950
483 Ga0501031_0068413
484 Ga0501032_0006763
485 Ga0501032_0008412
486 Ga0501033_0003465
487 Ga0501033_0017137
488 Ga0501033_0029815
489 Ga0501034_0007202
490 Ga0501034_0007457
491 Ga0501034_0025141
492 Ga0501034_0072509
493 Ga0501036_0001380
494 Ga0501036_0006934
495 Ga0501036_0040873
496 Ga0501036_0069032
497 Ga0501037_0006873
498 Ga0501037_0007170
499 Ga0501037_0053215
500 Ga0501038_0004829
501 Ga0501038_0050000
502 Ga0501038_0072578
503 Ga0501038_0084486
504 Ga0501039_0061152
505 Ga0501040_0011396
506 Ga0501041_0002572
507 Ga0501042_0024237
508 Ga0501043_0005114
509 Ga0501043_0007938
510 Ga0501043_0022497
511 Ga0501043_0251368
512 Ga0501046_0066760
513 Ga0501046_0074739
514 Ga0501047_0007853
515 Ga0501047_0008019
516 Ga0501047_0127434
517 Ga0501048_0002985
518 Ga0501048_0025854
519 Ga0501067_0001661
520 Ga0501068_0018026
521 Ga0501069_0002683
522 Ga0501070_0001456
523 Ga0501070_0043173
524 Ga0501070_0051880
525 Ga0501071_0007991
526 Ga0501072_0004424
527 Ga0501074_0049107
528 Ga0501076_0011888
529 Ga0501077_0007492
530 Ga0501080_0067626
531 Ga0501083_0003237
532 Ga0501035_0003129
533 Ga0501035_0009167
534 Ga0501035_0009796
535 Ga0501035_0019580
536 Ga0501035_0058695
537 Ga0501044_0000770
538 Ga0501044_0013479
539 Ga0501044_0018154
540 Ga0501045_0041548
541 nmdc:mga06z11_36886_c1
542 nmdc:mga04h51_15529_c1
543 Ga0500644_0010471
544 Ga0500583_0067152
545 Ga0500553_027715
546 Ga0500580_032753
547 Ga0500561_0000605
548 Ga0500573_0020291
549 Ga0500573_0027535
550 Ga0500633_0009003
551 Ga0501084_0007463
552 Ga0501082_0016922
553 Ga0466962_0006020
554 Ga0466962_0017942
555 Ga0530510_0100841
556 3006393850
557 2554258829
558 2585300082
559 2585311508
560 2585317984
561 2616694449
562 2643944991
563 2644267660
564 2644385853
565 2644408683
566 2644431890
567 2644435956
568 2644463124
569 2644632186
570 2784587556
571 2785368096
572 2786669149
573 2793982923
574 2808840753
575 2808919350
576 2809231120
577 2811847771
578 2812481569
579 2862182776
580 2862288513
581 2862295757
582 2862515135
583 2862582731
584 2867433085
585 2867478314
586 2873156871
587 2877682440
588 2912725321
589 2912759679
590 2918503385
591 2919468302
592 2935396599
593 2946051212
594 2946074737
595 2954004156
596 2954675447
597 2954688685
598 2954698456
599 2954703766
600 2954717437
601 2954727392
602 2954734400
603 2954746296
604 2954753283
605 2954765409
606 2997456187
607 3003003733
608 3006322288
609 3006490244
610 3006501300
611 8008562271
612 8008579909
613 8023627441
614 8025482973
615 8025533687
616 8047899448
617 8048136081
618 8048359482
619 8048376396
620 8048385451
621 8053950771
622 8056450461
623 8056669249
624 8056836599

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

34

382

0.88

PF00083

Sugar_tr

Sugar (and other) transporter

32

207

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zow-assembly1.cif.gz_A crystal structure of e. coli multidrug transporter mdfa in complex with chloramphenicol 0.8888 25 415
6oom-assembly2.cif.gz_A-2 protein a 0.8862 25 415
4zow-assembly1.cif.gz_A crystal structure of e. coli multidrug transporter mdfa in complex with chloramphenicol 0.8803 25 415
6euq-assembly1.cif.gz_A mdfa(q131r/l339e) 0.8763 28 415
6vs2-assembly1.cif.gz_A protein d 0.8758 28 415
ID Description Score Start End Superfamily
af_A0A1D6L8U4_23_213_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9241 32 206 1.20.1250.20
af_Q2G2I3_14_312_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9158 31 292 1.20.1250.20
af_P77589_11_202_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9083 26 217 1.20.1250.20
af_Q86M88_601_814_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9058 28 209 1.20.1250.20
af_P39398_32_230_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.904 24 209 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2J4PSZ1-F1-model_v4 Bcr/CflA family drug resistance efflux transporter 0.9571 30 161 GO:0005886
GO:0022857
AF-A0A2N2QZL9-F1-model_v4 Bcr/CflA family drug resistance efflux transporter 0.9523 19 204 GO:0005886
GO:0015385
GO:1990961
AF-A0A2N2QZL9-F1-model_v4 Bcr/CflA family drug resistance efflux transporter 0.9425 19 204 GO:0005886
GO:0015385
GO:1990961
AF-A0A2T4D3N0-F1-model_v4 Bcr/CflA family drug resistance efflux transporter 0.9344 176 419 GO:0005886
GO:0022857
AF-A0A2T4D3N0-F1-model_v4 Bcr/CflA family drug resistance efflux transporter 0.927 176 419 GO:0005886
GO:0022857

Map