F401796

General Info

Members Datasets Scaffolds Average Seq Length
312 142 624 284

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0008799|Ga0395905_0008799_4334_5263
Length 309
Sequence VNGIIVIDKSAGMTSHDVVRRVRRVTDERSVGHLGTLDPMATGVLPLLLGKFTRLAQFFGDADKEYAGTIRFGIATDTYDADGEPVGPERSVDFGDDELQTAVRSLTGKIQQMPPPFSAKKIAGVPAYKLARKGQAPELKPIEVEVTKFSVWPAAEAVNGRNNGPELSILHNTHYRTLYNFHTLSGSGTYVRSLAHDLGQKLGCGAHLASLRRTRSGEFSLEHALTLDELERLGADELSQRLLSAKTILRSMPAVVLRSEETERIRHGNAANLPVFSPAEMVKVFDGDDLIAIARRVAGTLFQPKVVLV

Samples

Sample ID Description Type Environment
1 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
104 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
105 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
106 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
107 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
108 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
109 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
110 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
111 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
112 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
116 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
122 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
127 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
132 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
133 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
134 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.56
Rhizosphere 97.12
Stem 0
Stem Tuber 0
Unclassified 10.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395905_0008799 3300037471 Bacteria 9921
2 JGI24743J22301_10017970 3300001991 Bacteria 1332
3 rootH2_10080294 3300003320 Unclassified 2919
4 Ga0070676_10005917 3300005328 Bacteria 6528
5 Ga0070683_100001492 3300005329 Bacteria 18066
6 Ga0070683_100001556 3300005329 Bacteria 17746
7 Ga0070683_100211873 3300005329 Bacteria 1841
8 Ga0070670_100010594 3300005331 Bacteria 7872
9 Ga0068869_100004855 3300005334 Bacteria 8399
10 Ga0070666_10028737 3300005335 Bacteria 3651
11 Ga0070666_10076952 3300005335 Bacteria 2277
12 Ga0070680_100320100 3300005336 Unclassified 1316
13 Ga0068868_100004476 3300005338 Bacteria 9800
14 Ga0068868_100022297 3300005338 Bacteria 4776
15 Ga0070661_100004616 3300005344 Bacteria 9480
16 Ga0070661_100051738 3300005344 Bacteria 3006
17 Ga0070668_100061780 3300005347 Bacteria 2903
18 Ga0070675_100025013 3300005354 Bacteria 4786
19 Ga0070671_100025737 3300005355 Bacteria 4831
20 Ga0070671_100027068 3300005355 Bacteria 4717
21 Ga0070671_100586823 3300005355 Bacteria 963
22 Ga0070667_100007396 3300005367 Bacteria 9122
23 Ga0070667_100049090 3300005367 Bacteria 3554
24 Ga0070709_10210593 3300005434 Unclassified 1382
25 Ga0070714_100027938 3300005435 Bacteria 4675
26 Ga0070713_100010367 3300005436 Bacteria 6733
27 Ga0070713_100071599 3300005436 Bacteria 2930
28 Ga0070713_100117420 3300005436 Unclassified 2328
29 Ga0070713_100206070 3300005436 Bacteria 1778
30 Ga0070678_100089117 3300005456 Bacteria 2361
31 Ga0070681_10226416 3300005458 Bacteria 1784
32 Ga0070681_10229342 3300005458 Bacteria 1771
33 Ga0070681_10295699 3300005458 Bacteria 1529
34 Ga0070699_100041095 3300005518 Bacteria 4002
35 Ga0070679_100109508 3300005530 Bacteria 2748
36 Ga0070679_100125380 3300005530 Bacteria 2550
37 Ga0070684_100002861 3300005535 Bacteria 12829
38 Ga0070684_100005055 3300005535 Bacteria 10070
39 Ga0070684_100050758 3300005535 Bacteria 3604
40 Ga0068853_100004104 3300005539 Bacteria 11220
41 Ga0068853_100044174 3300005539 Bacteria 3814
42 Ga0068853_100051556 3300005539 Bacteria 3542
43 Ga0068853_100104893 3300005539 Unclassified 2503
44 Ga0070665_100568410 3300005548 Bacteria 1146
45 Ga0068855_100000819 3300005563 Bacteria 38473
46 Ga0068855_100026325 3300005563 Bacteria 6958
47 Ga0068855_100266469 3300005563 Bacteria 1906
48 Ga0068857_100001991 3300005577 Bacteria 16557
49 Ga0068857_100430987 3300005577 Bacteria 1231
50 Ga0068857_100512920 3300005577 Bacteria 1126
51 Ga0068854_100050763 3300005578 Bacteria 2970
52 Ga0068856_100001782 3300005614 Bacteria 22500
53 Ga0068856_100008091 3300005614 Bacteria 10266
54 Ga0068856_100011451 3300005614 Bacteria 8606
55 Ga0068856_100060352 3300005614 Bacteria 3746
56 Ga0068856_100096510 3300005614 Bacteria 2944
57 Ga0068856_100144044 3300005614 Bacteria 2391
58 Ga0068856_100247490 3300005614 Bacteria 1798
59 Ga0068852_100003017 3300005616 Bacteria 11711
60 Ga0068852_100003172 3300005616 Bacteria 11474
61 Ga0068852_100003318 3300005616 Bacteria 11236
62 Ga0068852_100087380 3300005616 Bacteria 2782
63 Ga0068852_100224246 3300005616 Bacteria 1789
64 Ga0068859_100185811 3300005617 Bacteria 2162
65 Ga0068864_100001011 3300005618 Bacteria 23500
66 Ga0068851_10064816 3300005834 Bacteria 1878
67 Ga0068863_100001678 3300005841 Bacteria 21916
68 Ga0068863_100007398 3300005841 Bacteria 10747
69 Ga0068858_100003486 3300005842 Bacteria 15597
70 Ga0068860_100007224 3300005843 Bacteria 11106
71 Ga0068860_100023371 3300005843 Bacteria 5974
72 Ga0081540_1006020 3300005983 Bacteria 8923
73 Ga0070717_10000264 3300006028 Bacteria 35633
74 Ga0070717_10356578 3300006028 Bacteria 1308
75 Ga0070712_100125635 3300006175 Bacteria 1937
76 Ga0097621_100003579 3300006237 Bacteria 10736
77 Ga0097621_100039628 3300006237 Bacteria 3785
78 Ga0097621_100212384 3300006237 Bacteria 1683
79 Ga0068871_100003833 3300006358 Bacteria 10365
80 Ga0068871_100028898 3300006358 Bacteria 4351
81 Ga0075436_100124184 3300006914 Bacteria 1808
82 Ga0097620_100185810 3300006931 Bacteria 2162
83 Ga0105240_10003431 3300009093 Bacteria 24635
84 Ga0105240_10009850 3300009093 Bacteria 13489
85 Ga0105240_10015189 3300009093 Bacteria 10478
86 Ga0105240_10034845 3300009093 Bacteria 6490
87 Ga0105240_10045449 3300009093 Bacteria 5570
88 Ga0105240_10054107 3300009093 Bacteria 5031
89 Ga0105240_10084928 3300009093 Bacteria 3880
90 Ga0105240_10194586 3300009093 Bacteria 2382
91 Ga0105240_10541648 3300009093 Bacteria 1289
92 Ga0105245_10002580 3300009098 Bacteria 16317
93 Ga0105245_10006340 3300009098 Bacteria 10409
94 Ga0105247_10016685 3300009101 Bacteria 4404
95 Ga0105241_10000199 3300009174 Bacteria 44908
96 Ga0105241_10001305 3300009174 Bacteria 18974
97 Ga0105241_10002734 3300009174 Bacteria 13219
98 Ga0105241_10013210 3300009174 Bacteria 6053
99 Ga0105241_10018485 3300009174 Bacteria 5127
100 Ga0105248_10000004 3300009177 Bacteria 695244
101 Ga0105248_10000255 3300009177 Bacteria 62145
102 Ga0105248_10037885 3300009177 Bacteria 5395
103 Ga0105237_10003805 3300009545 Bacteria 17734
104 Ga0105237_10019484 3300009545 Bacteria 7007
105 Ga0105237_10180396 3300009545 Bacteria 2112
106 Ga0105238_10000262 3300009551 Bacteria 58846
107 Ga0105238_10000292 3300009551 Bacteria 55692
108 Ga0105238_10007813 3300009551 Bacteria 10696
109 Ga0105238_10180103 3300009551 Bacteria 2090
110 Ga0105238_10268960 3300009551 Bacteria 1685
111 Ga0105238_10320512 3300009551 Bacteria 1536
112 Ga0105238_10754027 3300009551 Bacteria 987
113 Ga0105249_10297308 3300009553 Bacteria 1618
114 Ga0105239_10001873 3300010375 Bacteria 27535
115 Ga0105239_10004032 3300010375 Bacteria 17766
116 Ga0105239_10007426 3300010375 Bacteria 12574
117 Ga0105239_10054842 3300010375 Bacteria 4373
118 Ga0105246_10006772 3300011119 Bacteria 7006
119 Ga0105246_10224754 3300011119 Bacteria 1474
120 Ga0157370_10000107 3300013104 Bacteria 95413
121 Ga0157370_10138612 3300013104 Unclassified 2267
122 Ga0157369_10000275 3300013105 Bacteria 69270
123 Ga0157369_10003741 3300013105 Bacteria 18074
124 Ga0157369_10014204 3300013105 Bacteria 8996
125 Ga0157369_10085608 3300013105 Bacteria 3368
126 Ga0157369_10620856 3300013105 Bacteria 1115
127 Ga0157374_10009888 3300013296 Bacteria 8185
128 Ga0157374_10044159 3300013296 Unclassified 4119
129 Ga0157374_10076869 3300013296 Bacteria 3157
130 Ga0157374_10078014 3300013296 Unclassified 3136
131 Ga0157374_10584871 3300013296 Bacteria 1126
132 Ga0157378_10017511 3300013297 Bacteria 6289
133 Ga0157378_10029194 3300013297 Bacteria 4868
134 Ga0157378_10060332 3300013297 Unclassified 3385
135 Ga0157378_10078165 3300013297 Bacteria 2984
136 Ga0163162_10046586 3300013306 Bacteria 4346
137 Ga0163162_10209113 3300013306 Bacteria 2081
138 Ga0157372_10000127 3300013307 Bacteria 82699
139 Ga0157372_10014484 3300013307 Bacteria 8438
140 Ga0157372_10023808 3300013307 Bacteria 6643
141 Ga0157372_10076621 3300013307 Bacteria 3776
142 Ga0157372_10096852 3300013307 Unclassified 3363
143 Ga0157372_10099093 3300013307 Bacteria 3324
144 Ga0157372_10112432 3300013307 Bacteria 3120
145 Ga0157372_10140757 3300013307 Bacteria 2779
146 Ga0157372_10210118 3300013307 Bacteria 2255
147 Ga0157372_10309806 3300013307 Bacteria 1837
148 Ga0157372_10384127 3300013307 Unclassified 1636
149 Ga0157375_10011935 3300013308 Bacteria 7687
150 Ga0157375_10015926 3300013308 Bacteria 6742
151 Ga0157375_10124698 3300013308 Bacteria 2689
152 Ga0157377_10157930 3300014745 Bacteria 1408
153 Ga0157379_10005183 3300014968 Bacteria 11193
154 Ga0157379_10018173 3300014968 Bacteria 6195
155 Ga0157379_10074904 3300014968 Bacteria 3030
156 Ga0157379_10105290 3300014968 Bacteria 2532
157 Ga0157376_10001195 3300014969 Bacteria 17141
158 Ga0157376_10060758 3300014969 Bacteria 3175
159 Ga0207656_10098735 3300025321 Bacteria 1336
160 Ga0207656_10111279 3300025321 Unclassified 1266
161 Ga0207710_10008632 3300025900 Bacteria 4296
162 Ga0207680_10060971 3300025903 Bacteria 2299
163 Ga0207647_10046122 3300025904 Bacteria 2716
164 Ga0207699_10264861 3300025906 Unclassified 1189
165 Ga0207645_10005882 3300025907 Bacteria 8836
166 Ga0207705_10159962 3300025909 Bacteria 1691
167 Ga0207654_10000013 3300025911 Bacteria 241873
168 Ga0207654_10000219 3300025911 Bacteria 35241
169 Ga0207654_10002713 3300025911 Bacteria 8986
170 Ga0207654_10070770 3300025911 Bacteria 2072
171 Ga0207654_10116414 3300025911 Bacteria 1671
172 Ga0207707_10247204 3300025912 Bacteria 1550
173 Ga0207695_10000233 3300025913 Bacteria 147498
174 Ga0207695_10000258 3300025913 Bacteria 134197
175 Ga0207695_10000501 3300025913 Bacteria 83342
176 Ga0207695_10005107 3300025913 Bacteria 17581
177 Ga0207695_10049782 3300025913 Unclassified 4413
178 Ga0207695_10089803 3300025913 Bacteria 3089
179 Ga0207695_10480445 3300025913 Bacteria 1125
180 Ga0207671_10000022 3300025914 Bacteria 277803
181 Ga0207671_10001087 3300025914 Bacteria 32869
182 Ga0207671_10042852 3300025914 Bacteria 3349
183 Ga0207657_10329820 3300025919 Bacteria 1205
184 Ga0207649_10014261 3300025920 Bacteria 4447
185 Ga0207649_10078091 3300025920 Bacteria 2135
186 Ga0207652_10109829 3300025921 Bacteria 2445
187 Ga0207694_10000009 3300025924 Bacteria 460687
188 Ga0207694_10000530 3300025924 Bacteria 34549
189 Ga0207694_10000682 3300025924 Bacteria 30458
190 Ga0207694_10156795 3300025924 Bacteria 1837
191 Ga0207650_10093216 3300025925 Bacteria 2305
192 Ga0207687_10125552 3300025927 Bacteria 1926
193 Ga0207700_10002175 3300025928 Bacteria 11231
194 Ga0207664_10252310 3300025929 Bacteria 1540
195 Ga0207644_10103796 3300025931 Bacteria 2139
196 Ga0207644_10329008 3300025931 Bacteria 1237
197 Ga0207704_10029867 3300025938 Bacteria 3047
198 Ga0207691_10010218 3300025940 Bacteria 9004
199 Ga0207711_10000008 3300025941 Bacteria 597686
200 Ga0207711_10000010 3300025941 Bacteria 557970
201 Ga0207711_10087653 3300025941 Bacteria 2731
202 Ga0207689_10000543 3300025942 Bacteria 35857
203 Ga0207689_10028697 3300025942 Bacteria 4654
204 Ga0207661_10002791 3300025944 Bacteria 12045
205 Ga0207661_10008722 3300025944 Bacteria 7250
206 Ga0207661_10074641 3300025944 Bacteria 2780
207 Ga0207661_10154975 3300025944 Bacteria 1983
208 Ga0207667_10007746 3300025949 Bacteria 12837
209 Ga0207667_10034303 3300025949 Bacteria 5450
210 Ga0207667_10090955 3300025949 Bacteria 3153
211 Ga0207640_10208946 3300025981 Bacteria 1485
212 Ga0207658_10098901 3300025986 Bacteria 2280
213 Ga0207677_10002256 3300026023 Bacteria 10115
214 Ga0207703_10059545 3300026035 Bacteria 3119
215 Ga0207703_10074712 3300026035 Bacteria 2807
216 Ga0207639_10002669 3300026041 Bacteria 11977
217 Ga0207639_10142097 3300026041 Bacteria 2001
218 Ga0207702_10008532 3300026078 Bacteria 8638
219 Ga0207702_10026962 3300026078 Bacteria 4770
220 Ga0207702_10035229 3300026078 Bacteria 4185
221 Ga0207702_10143949 3300026078 Unclassified 2160
222 Ga0207641_10008771 3300026088 Bacteria 8351
223 Ga0207641_10077999 3300026088 Bacteria 2868
224 Ga0207648_10085315 3300026089 Bacteria 2755
225 Ga0207676_10002800 3300026095 Bacteria 12398
226 Ga0207676_10087223 3300026095 Bacteria 2552
227 Ga0207674_10001761 3300026116 Bacteria 27686
228 Ga0207674_10003906 3300026116 Bacteria 18131
229 Ga0207674_10054691 3300026116 Bacteria 4063
230 Ga0207674_10485027 3300026116 Bacteria 1195
231 Ga0207683_10000329 3300026121 Bacteria 43154
232 Ga0207698_10000109 3300026142 Bacteria 51574
233 Ga0207698_10002320 3300026142 Bacteria 11270
234 Ga0207698_10031842 3300026142 Bacteria 3812
235 Ga0207698_10157846 3300026142 Bacteria 1979
236 Ga0207698_10249549 3300026142 Bacteria 1623
237 Ga0268266_10080210 3300028379 Bacteria 2843
238 Ga0268266_10388580 3300028379 Bacteria 1317
239 Ga0265318_10026328 3300028577 Unclassified 2291
240 Ga0265336_10003228 3300028666 Bacteria 6468
241 Ga0265338_10004864 3300028800 Bacteria 17896
242 Ga0265338_10071368 3300028800 Bacteria 2972
243 Ga0265338_10079043 3300028800 Bacteria 2770
244 Ga0265338_10086827 3300028800 Unclassified 2601
245 Ga0265338_10146148 3300028800 Bacteria 1844
246 Ga0265338_10262541 3300028800 Unclassified 1269
247 Ga0265338_10335867 3300028800 Bacteria 1090
248 Ga0265330_10002436 3300031235 Bacteria 10138
249 Ga0265330_10032017 3300031235 Bacteria 2357
250 Ga0265330_10159640 3300031235 Bacteria 957
251 Ga0265320_10024233 3300031240 Unclassified 3214
252 Ga0265325_10016335 3300031241 Bacteria 4151
253 Ga0265325_10069225 3300031241 Bacteria 1775
254 Ga0265339_10000557 3300031249 Bacteria 29155
255 Ga0265339_10000694 3300031249 Bacteria 26062
256 Ga0265339_10061523 3300031249 Bacteria 2020
257 Ga0265339_10062029 3300031249 Bacteria 2010
258 Ga0265339_10122509 3300031249 Bacteria 1335
259 Ga0265331_10046249 3300031250 Bacteria 2098
260 Ga0265316_10001818 3300031344 Bacteria 22421
261 Ga0265316_10012182 3300031344 Bacteria 7715
262 Ga0265316_10016452 3300031344 Bacteria 6414
263 Ga0265316_10144038 3300031344 Bacteria 1788
264 Ga0265316_10159085 3300031344 Bacteria 1689
265 Ga0265313_10003472 3300031595 Bacteria 12727
266 Ga0265313_10033956 3300031595 Bacteria 2585
267 Ga0265313_10050514 3300031595 Bacteria 1995
268 Ga0265313_10065190 3300031595 Unclassified 1692
269 Ga0265314_10000098 3300031711 Bacteria 133427
270 Ga0265314_10070565 3300031711 Bacteria 2340
271 Ga0265314_10076523 3300031711 Bacteria 2223
272 Ga0265342_10000916 3300031712 Bacteria 29269
273 Ga0265342_10001506 3300031712 Bacteria 21599
274 Ga0265342_10009471 3300031712 Bacteria 6858
275 Ga0265342_10014802 3300031712 Bacteria 5163
276 Ga0265342_10041111 3300031712 Bacteria 2801
277 Ga0265342_10061305 3300031712 Unclassified 2216
278 Ga0373944_0108505 3300035089 Bacteria 945
279 Ga0373923_0017969 3300035111 Bacteria 2713
280 Ga0373954_0236688 3300035118 Unclassified 899
281 Ga0373937_0027997 3300036401 Bacteria 5098
282 Ga0395905_0059415 3300037471 Bacteria 3574
283 Ga0395905_0064812 3300037471 Unclassified 3420
284 Ga0395905_0069604 3300037471 Bacteria 3296
285 Ga0395901_0804520 3300038443 Unclassified 929
286 Ga0451577_0000018 3300042876 Bacteria 516495
287 Ga0466969_0126665 3300044656 Bacteria 1186
288 Ga0466963_0000873 3300044694 Bacteria 15279
289 Ga0453684_0000166 3300044712 Bacteria 294291
290 Ga0466959_0145794 3300045049 Unclassified 1671
291 Ga0466967_0003352 3300045976 Bacteria 10415
292 Ga0466967_0319930 3300045976 Bacteria 1496
293 Ga0495582_0228219 3300046473 Unclassified 1066
294 Ga0495645_0077820 3300046543 Bacteria 2384
295 Ga0495634_0179975 3300046642 Bacteria 1324
296 Ga0495635_0088034 3300046663 Unclassified 2125
297 Ga0495635_0327209 3300046663 Unclassified 1025
298 Ga0495613_0196664 3300046689 Bacteria 1423
299 Ga0495600_0076764 3300046809 Bacteria 2182
300 Ga0495674_0269733 3300047319 Bacteria 1397
301 Ga0495675_0289105 3300047444 Unclassified 976
302 Ga0495602_0244569 3300048088 Bacteria 1340
303 Ga0496104_0262343 3300048907 Bacteria 1640
304 Ga0496104_0562643 3300048907 Unclassified 1051
305 Ga0496105_0034714 3300048908 Bacteria 4149
306 Ga0496106_0159946 3300048909 Unclassified 1781
307 Ga0496109_0268361 3300048912 Bacteria 1608
308 Ga0496112_0335811 3300048915 Unclassified 1455
309 Ga0496113_0310641 3300048916 Bacteria 1263
310 Ga0496113_0518090 3300048916 Bacteria 957
311 Ga0501070_0366162 3300049586 Bacteria 1169
312 nmdc:mga08x19_203058_c1 3300050514 Unclassified 1359
313 Ga0395905_0008799
314 JGI24743J22301_10017970
315 rootH2_10080294
316 Ga0070676_10005917
317 Ga0070683_100001492
318 Ga0070683_100001556
319 Ga0070683_100211873
320 Ga0070670_100010594
321 Ga0068869_100004855
322 Ga0070666_10028737
323 Ga0070666_10076952
324 Ga0070680_100320100
325 Ga0068868_100004476
326 Ga0068868_100022297
327 Ga0070661_100004616
328 Ga0070661_100051738
329 Ga0070668_100061780
330 Ga0070675_100025013
331 Ga0070671_100025737
332 Ga0070671_100027068
333 Ga0070671_100586823
334 Ga0070667_100007396
335 Ga0070667_100049090
336 Ga0070709_10210593
337 Ga0070714_100027938
338 Ga0070713_100010367
339 Ga0070713_100071599
340 Ga0070713_100117420
341 Ga0070713_100206070
342 Ga0070678_100089117
343 Ga0070681_10226416
344 Ga0070681_10229342
345 Ga0070681_10295699
346 Ga0070699_100041095
347 Ga0070679_100109508
348 Ga0070679_100125380
349 Ga0070684_100002861
350 Ga0070684_100005055
351 Ga0070684_100050758
352 Ga0068853_100004104
353 Ga0068853_100044174
354 Ga0068853_100051556
355 Ga0068853_100104893
356 Ga0070665_100568410
357 Ga0068855_100000819
358 Ga0068855_100026325
359 Ga0068855_100266469
360 Ga0068857_100001991
361 Ga0068857_100430987
362 Ga0068857_100512920
363 Ga0068854_100050763
364 Ga0068856_100001782
365 Ga0068856_100008091
366 Ga0068856_100011451
367 Ga0068856_100060352
368 Ga0068856_100096510
369 Ga0068856_100144044
370 Ga0068856_100247490
371 Ga0068852_100003017
372 Ga0068852_100003172
373 Ga0068852_100003318
374 Ga0068852_100087380
375 Ga0068852_100224246
376 Ga0068859_100185811
377 Ga0068864_100001011
378 Ga0068851_10064816
379 Ga0068863_100001678
380 Ga0068863_100007398
381 Ga0068858_100003486
382 Ga0068860_100007224
383 Ga0068860_100023371
384 Ga0081540_1006020
385 Ga0070717_10000264
386 Ga0070717_10356578
387 Ga0070712_100125635
388 Ga0097621_100003579
389 Ga0097621_100039628
390 Ga0097621_100212384
391 Ga0068871_100003833
392 Ga0068871_100028898
393 Ga0075436_100124184
394 Ga0097620_100185810
395 Ga0105240_10003431
396 Ga0105240_10009850
397 Ga0105240_10015189
398 Ga0105240_10034845
399 Ga0105240_10045449
400 Ga0105240_10054107
401 Ga0105240_10084928
402 Ga0105240_10194586
403 Ga0105240_10541648
404 Ga0105245_10002580
405 Ga0105245_10006340
406 Ga0105247_10016685
407 Ga0105241_10000199
408 Ga0105241_10001305
409 Ga0105241_10002734
410 Ga0105241_10013210
411 Ga0105241_10018485
412 Ga0105248_10000004
413 Ga0105248_10000255
414 Ga0105248_10037885
415 Ga0105237_10003805
416 Ga0105237_10019484
417 Ga0105237_10180396
418 Ga0105238_10000262
419 Ga0105238_10000292
420 Ga0105238_10007813
421 Ga0105238_10180103
422 Ga0105238_10268960
423 Ga0105238_10320512
424 Ga0105238_10754027
425 Ga0105249_10297308
426 Ga0105239_10001873
427 Ga0105239_10004032
428 Ga0105239_10007426
429 Ga0105239_10054842
430 Ga0105246_10006772
431 Ga0105246_10224754
432 Ga0157370_10000107
433 Ga0157370_10138612
434 Ga0157369_10000275
435 Ga0157369_10003741
436 Ga0157369_10014204
437 Ga0157369_10085608
438 Ga0157369_10620856
439 Ga0157374_10009888
440 Ga0157374_10044159
441 Ga0157374_10076869
442 Ga0157374_10078014
443 Ga0157374_10584871
444 Ga0157378_10017511
445 Ga0157378_10029194
446 Ga0157378_10060332
447 Ga0157378_10078165
448 Ga0163162_10046586
449 Ga0163162_10209113
450 Ga0157372_10000127
451 Ga0157372_10014484
452 Ga0157372_10023808
453 Ga0157372_10076621
454 Ga0157372_10096852
455 Ga0157372_10099093
456 Ga0157372_10112432
457 Ga0157372_10140757
458 Ga0157372_10210118
459 Ga0157372_10309806
460 Ga0157372_10384127
461 Ga0157375_10011935
462 Ga0157375_10015926
463 Ga0157375_10124698
464 Ga0157377_10157930
465 Ga0157379_10005183
466 Ga0157379_10018173
467 Ga0157379_10074904
468 Ga0157379_10105290
469 Ga0157376_10001195
470 Ga0157376_10060758
471 Ga0207656_10098735
472 Ga0207656_10111279
473 Ga0207710_10008632
474 Ga0207680_10060971
475 Ga0207647_10046122
476 Ga0207699_10264861
477 Ga0207645_10005882
478 Ga0207705_10159962
479 Ga0207654_10000013
480 Ga0207654_10000219
481 Ga0207654_10002713
482 Ga0207654_10070770
483 Ga0207654_10116414
484 Ga0207707_10247204
485 Ga0207695_10000233
486 Ga0207695_10000258
487 Ga0207695_10000501
488 Ga0207695_10005107
489 Ga0207695_10049782
490 Ga0207695_10089803
491 Ga0207695_10480445
492 Ga0207671_10000022
493 Ga0207671_10001087
494 Ga0207671_10042852
495 Ga0207657_10329820
496 Ga0207649_10014261
497 Ga0207649_10078091
498 Ga0207652_10109829
499 Ga0207694_10000009
500 Ga0207694_10000530
501 Ga0207694_10000682
502 Ga0207694_10156795
503 Ga0207650_10093216
504 Ga0207687_10125552
505 Ga0207700_10002175
506 Ga0207664_10252310
507 Ga0207644_10103796
508 Ga0207644_10329008
509 Ga0207704_10029867
510 Ga0207691_10010218
511 Ga0207711_10000008
512 Ga0207711_10000010
513 Ga0207711_10087653
514 Ga0207689_10000543
515 Ga0207689_10028697
516 Ga0207661_10002791
517 Ga0207661_10008722
518 Ga0207661_10074641
519 Ga0207661_10154975
520 Ga0207667_10007746
521 Ga0207667_10034303
522 Ga0207667_10090955
523 Ga0207640_10208946
524 Ga0207658_10098901
525 Ga0207677_10002256
526 Ga0207703_10059545
527 Ga0207703_10074712
528 Ga0207639_10002669
529 Ga0207639_10142097
530 Ga0207702_10008532
531 Ga0207702_10026962
532 Ga0207702_10035229
533 Ga0207702_10143949
534 Ga0207641_10008771
535 Ga0207641_10077999
536 Ga0207648_10085315
537 Ga0207676_10002800
538 Ga0207676_10087223
539 Ga0207674_10001761
540 Ga0207674_10003906
541 Ga0207674_10054691
542 Ga0207674_10485027
543 Ga0207683_10000329
544 Ga0207698_10000109
545 Ga0207698_10002320
546 Ga0207698_10031842
547 Ga0207698_10157846
548 Ga0207698_10249549
549 Ga0268266_10080210
550 Ga0268266_10388580
551 Ga0265318_10026328
552 Ga0265336_10003228
553 Ga0265338_10004864
554 Ga0265338_10071368
555 Ga0265338_10079043
556 Ga0265338_10086827
557 Ga0265338_10146148
558 Ga0265338_10262541
559 Ga0265338_10335867
560 Ga0265330_10002436
561 Ga0265330_10032017
562 Ga0265330_10159640
563 Ga0265320_10024233
564 Ga0265325_10016335
565 Ga0265325_10069225
566 Ga0265339_10000557
567 Ga0265339_10000694
568 Ga0265339_10061523
569 Ga0265339_10062029
570 Ga0265339_10122509
571 Ga0265331_10046249
572 Ga0265316_10001818
573 Ga0265316_10012182
574 Ga0265316_10016452
575 Ga0265316_10144038
576 Ga0265316_10159085
577 Ga0265313_10003472
578 Ga0265313_10033956
579 Ga0265313_10050514
580 Ga0265313_10065190
581 Ga0265314_10000098
582 Ga0265314_10070565
583 Ga0265314_10076523
584 Ga0265342_10000916
585 Ga0265342_10001506
586 Ga0265342_10009471
587 Ga0265342_10014802
588 Ga0265342_10041111
589 Ga0265342_10061305
590 Ga0373944_0108505
591 Ga0373923_0017969
592 Ga0373954_0236688
593 Ga0373937_0027997
594 Ga0395905_0059415
595 Ga0395905_0064812
596 Ga0395905_0069604
597 Ga0395901_0804520
598 Ga0451577_0000018
599 Ga0466969_0126665
600 Ga0466963_0000873
601 Ga0453684_0000166
602 Ga0466959_0145794
603 Ga0466967_0003352
604 Ga0466967_0319930
605 Ga0495582_0228219
606 Ga0495645_0077820
607 Ga0495634_0179975
608 Ga0495635_0088034
609 Ga0495635_0327209
610 Ga0495613_0196664
611 Ga0495600_0076764
612 Ga0495674_0269733
613 Ga0495675_0289105
614 Ga0495602_0244569
615 Ga0496104_0262343
616 Ga0496104_0562643
617 Ga0496105_0034714
618 Ga0496106_0159946
619 Ga0496109_0268361
620 Ga0496112_0335811
621 Ga0496113_0310641
622 Ga0496113_0518090
623 Ga0501070_0366162
624 nmdc:mga08x19_203058_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01509

TruB_N

TruB family pseudouridylate synthase (N terminal domain)

23

162

0.96

PF16198

TruB_C_2

tRNA pseudouridylate synthase B C-terminal domain

192

251

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1k8w-assembly1.cif.gz_A crystal structure of the e. coli pseudouridine synthase trub bound to a t stem-loop rna 0.9005 1 290
1zl3-assembly1.cif.gz_A coupling of active site motions and rna binding 0.8961 1 290
1k8w-assembly1.cif.gz_A crystal structure of the e. coli pseudouridine synthase trub bound to a t stem-loop rna 0.8918 1 290
1zl3-assembly1.cif.gz_A coupling of active site motions and rna binding 0.8876 1 290
1r3e-assembly1.cif.gz_A crystal structure of trna pseudouridine synthase trub and its rna complex: rna-protein recognition through a combination of rigid docking and induced fit 0.8849 2 290
ID Description Score Start End Superfamily
af_P9WHP7_7_227_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9563 3 211 3.30.2350.10
af_Q0WVR7_318_539_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9502 2 214 3.30.2350.10
2apoA03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9436 63 196 3.30.70.3190
1ze1D01 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9223 2 225 3.30.2350.10
af_Q57612_45_223_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9211 3 213 3.30.2350.10
ID Description Score Start End GO Terms
AF-A0A2V6FNF4-F1-model_v4 tRNA pseudouridine(55) synthase (EC 5.4.99.25) 0.9689 96 209 GO:0003723
GO:0006400
GO:0160148
GO:1990481
AF-A0A524AMH7-F1-model_v4 tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase) 0.9686 1 212 GO:0003723
GO:0031119
GO:0160148
GO:1990481
AF-A0A523UQC2-F1-model_v4 tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase) 0.968 1 211 GO:0003723
GO:0031119
GO:0160148
GO:1990481
AF-A0A2V8GQF3-F1-model_v4 tRNA pseudouridine(55) synthase (EC 5.4.99.25) 0.9671 1 169 GO:0003723
GO:0006400
GO:0160148
GO:1990481
AF-A0A2M6YHM2-F1-model_v4 tRNA pseudouridine(55) synthase (EC 5.4.99.25) 0.9668 1 204 GO:0003723
GO:0006400
GO:0160148
GO:1990481

Map