F401635

General Info

Members Datasets Scaffolds Average Seq Length
312 178 624 452

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10097337|Ga0070717_100973372
Length 487
Sequence VHSREINSHGESRRHGALHRQIGMLTQEQAGGIFDRIRTLSSADEVEVLFSGGRFALTRFANNTIHQNVAEENHVVSVRTAFGQRTARATTNKFDDESLRLVVKNSEALARVQHPDPDLLPMPDSPSAGGTNKTPVPPQTRHFQSTAAISPELRAEGVKKIVSIADRHKLTTAGVFSSGEYVEGIFNSRGLSRWHTQTSAEVSVTMLAADSSGWQKANSPDAATIDPLRLAEVAAQKAVDSAHPKDVPAYKYTVILEPAAVLDIVGFMFWDYSGIAILDQRSFLTGRIGTRLFGENITILDDVAHPLQAGSPFDGEGVLRKKIALVENGVAKRVVYARATAERMKHSEHKDKVGPIEPTGHGFSLPNEMGEMPLNIVFAPMSDPQTVEQMIASTERGILVTRLWYIREVEPFEKMLTGMTRDGTFLIEKGRVVGGVRNFRFNESLIHMLSNVEAMGVPVRSSGEESFDMVVPAMKVNDFNFTEVTKF

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
5 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
8 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
9 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
10 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
46 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
47 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
48 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
77 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
78 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
79 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
84 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
85 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
86 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
87 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
88 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
89 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
90 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
91 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
100 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
101 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
102 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
106 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
109 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
110 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
111 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
112 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
113 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
114 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
115 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
120 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
123 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
124 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
125 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
126 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
127 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
128 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
129 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
134 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
135 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
136 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
137 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
138 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
139 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
140 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
141 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
142 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
143 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
144 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
145 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
146 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
147 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
148 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
151 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
152 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
153 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
154 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
155 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
156 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
161 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
162 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
163 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
164 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
169 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
170 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
175 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
176 2643221556 Massilia sp. Root1485 Isolate Unclassified
177 2643221684 Massilia sp. Root133 Isolate Unclassified
178 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.08
Metatranscriptomes 0.96
Isolates 0.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.41
Nodule 0
Rhizoplane 3.85
Rhizosphere 88.14
Stem 0
Stem Tuber 0
Unclassified 5.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10097337 3300006028 Bacteria 2493
2 LJNas_1000808 3300000546 Bacteria 5203
3 JGI25152J39213_1000042 3300002773 Bacteria 87937
4 JGI25159J45721_1000813 3300002987 Bacteria 13585
5 Ga0055525_1000147 3300003759 Bacteria 96457
6 Ga0055526_1000356 3300003771 Bacteria 37162
7 Ga0055537_1000069 3300003773 Bacteria 74185
8 Ga0055534_1000111 3300003784 Bacteria 60131
9 Ga0055528_1000101 3300003790 Bacteria 68157
10 Ga0055543_1001382 3300004625 Bacteria 9713
11 Ga0065165_1000255 3300005262 Bacteria 92321
12 Ga0065165_1001743 3300005262 Bacteria 21702
13 Ga0065715_10016429 3300005293 Bacteria 1854
14 Ga0070690_100037177 3300005330 Unclassified 3067
15 Ga0070709_10000342 3300005434 Bacteria 29015
16 Ga0070709_10028418 3300005434 Bacteria 3335
17 Ga0070709_10028860 3300005434 Unclassified 3312
18 Ga0070714_100000231 3300005435 Bacteria 44130
19 Ga0070714_100040314 3300005435 Bacteria 3936
20 Ga0070713_100000349 3300005436 Bacteria 30061
21 Ga0070713_100000464 3300005436 Bacteria 25883
22 Ga0070713_100007744 3300005436 Bacteria 7563
23 Ga0070713_100009782 3300005436 Bacteria 6892
24 Ga0070713_100027388 3300005436 Bacteria 4487
25 Ga0070713_100045957 3300005436 Bacteria 3580
26 Ga0070710_10012685 3300005437 Bacteria 4193
27 Ga0070710_10015228 3300005437 Bacteria 3889
28 Ga0070711_100003499 3300005439 Bacteria 9155
29 Ga0070711_100003874 3300005439 Bacteria 8785
30 Ga0070711_100006200 3300005439 Bacteria 7192
31 Ga0070694_100050031 3300005444 Bacteria 2816
32 Ga0070708_100034096 3300005445 Bacteria 4427
33 Ga0070681_10017801 3300005458 Bacteria 7099
34 Ga0070706_100036413 3300005467 Bacteria 4545
35 Ga0070706_100094271 3300005467 Unclassified 2778
36 Ga0070699_100025429 3300005518 Bacteria 5103
37 Ga0070679_100043848 3300005530 Bacteria 4454
38 Ga0070697_100002966 3300005536 Bacteria 13047
39 Ga0070697_100077720 3300005536 Bacteria 2731
40 Ga0070686_100039885 3300005544 Bacteria 2928
41 Ga0070693_100119392 3300005547 Unclassified 1633
42 Ga0068855_100105614 3300005563 Unclassified 3238
43 Ga0068857_100080105 3300005577 Bacteria 2916
44 Ga0068863_100027217 3300005841 Bacteria 5452
45 Ga0070717_10001227 3300006028 Bacteria 17447
46 Ga0070717_10006280 3300006028 Bacteria 8727
47 Ga0070717_10087745 3300006028 Unclassified 2621
48 Ga0070715_10004165 3300006163 Bacteria 4705
49 Ga0070715_10006895 3300006163 Bacteria 3883
50 Ga0070716_100008396 3300006173 Bacteria 5122
51 Ga0070716_100048858 3300006173 Unclassified 2394
52 Ga0070716_100054056 3300006173 Bacteria 2292
53 Ga0070712_100000401 3300006175 Bacteria 24660
54 Ga0070712_100000586 3300006175 Bacteria 21238
55 Ga0070712_100003006 3300006175 Bacteria 10438
56 Ga0070712_100016090 3300006175 Bacteria 4827
57 Ga0075366_10034764 3300006195 Bacteria 2970
58 Ga0075428_100000003 3300006844 Bacteria 365483
59 Ga0075436_100106522 3300006914 Bacteria 1955
60 Ga0105244_10000294 3300009036 Bacteria 48872
61 Ga0105240_10033712 3300009093 Bacteria 6612
62 Ga0111539_10000001 3300009094 Bacteria 1035431
63 Ga0114129_10138342 3300009147 Bacteria 3340
64 Ga0105248_10140388 3300009177 Bacteria 2725
65 Ga0157372_10050540 3300013307 Unclassified 4624
66 Ga0157372_10158015 3300013307 Bacteria 2619
67 Ga0163163_10002629 3300014325 Bacteria 15206
68 Ga0157380_10209041 3300014326 Bacteria 1738
69 Ga0224572_1006427 3300024225 Bacteria 2126
70 Ga0228598_1000392 3300024227 Bacteria 8806
71 Ga0209436_106771 3300025208 Bacteria 2469
72 Ga0209565_1000158 3300025263 Bacteria 90487
73 Ga0209673_1000290 3300025273 Bacteria 93927
74 Ga0209130_1000239 3300025284 Bacteria 70591
75 Ga0209675_1000152 3300025291 Bacteria 90579
76 Ga0209564_1000339 3300025295 Bacteria 89599
77 Ga0209256_1000278 3300025299 Bacteria 89714
78 Ga0207655_1000691 3300025728 Bacteria 39279
79 Ga0207692_10007889 3300025898 Bacteria 4384
80 Ga0207692_10017957 3300025898 Bacteria 3166
81 Ga0207692_10074614 3300025898 Unclassified 1798
82 Ga0207685_10005911 3300025905 Unclassified 3281
83 Ga0207699_10003310 3300025906 Bacteria 7682
84 Ga0207699_10060916 3300025906 Bacteria 2268
85 Ga0207699_10075704 3300025906 Bacteria 2071
86 Ga0207684_10057475 3300025910 Bacteria 3301
87 Ga0207684_10160324 3300025910 Bacteria 1937
88 Ga0207707_10069503 3300025912 Bacteria 3069
89 Ga0207693_10000142 3300025915 Bacteria 65780
90 Ga0207693_10000215 3300025915 Bacteria 53182
91 Ga0207693_10002184 3300025915 Bacteria 17057
92 Ga0207693_10012264 3300025915 Bacteria 6927
93 Ga0207663_10000512 3300025916 Bacteria 17004
94 Ga0207663_10003671 3300025916 Bacteria 7546
95 Ga0207652_10032119 3300025921 Unclassified 4410
96 Ga0207646_10155295 3300025922 Bacteria 2064
97 Ga0207700_10000200 3300025928 Bacteria 35788
98 Ga0207700_10005255 3300025928 Bacteria 7717
99 Ga0207700_10005553 3300025928 Bacteria 7567
100 Ga0207700_10009464 3300025928 Bacteria 6089
101 Ga0207664_10000033 3300025929 Bacteria 176549
102 Ga0207664_10047224 3300025929 Unclassified 3382
103 Ga0207665_10015989 3300025939 Bacteria 4927
104 Ga0207665_10024979 3300025939 Bacteria 3939
105 Ga0207665_10049299 3300025939 Unclassified 2829
106 Ga0207667_10160581 3300025949 Bacteria 2312
107 Ga0207677_10009387 3300026023 Bacteria 5506
108 Ga0207702_10000479 3300026078 Bacteria 44958
109 Ga0207702_10048539 3300026078 Bacteria 3581
110 Ga0207641_10055565 3300026088 Bacteria 3362
111 Ga0207674_10075762 3300026116 Bacteria 3374
112 Ga0207683_10091352 3300026121 Bacteria 2712
113 Ga0207428_10000002 3300027907 Bacteria 854851
114 Ga0265356_1000078 3300028017 Bacteria 16086
115 Ga0265338_10002910 3300028800 Bacteria 24891
116 Ga0265338_10035271 3300028800 Bacteria 4814
117 Ga0265760_10006515 3300031090 Bacteria 3339
118 Ga0265760_10009997 3300031090 Bacteria 2707
119 Ga0265760_10010649 3300031090 Bacteria 2627
120 Ga0265340_10032408 3300031247 Bacteria 2609
121 Ga0265339_10008695 3300031249 Bacteria 6443
122 Ga0265313_10006256 3300031595 Bacteria 8485
123 Ga0265314_10021008 3300031711 Bacteria 5031
124 Ga0265342_10021252 3300031712 Bacteria 4148
125 Ga0307411_10080949 3300032005 Bacteria 2235
126 Ga0316212_1002858 3300033547 Bacteria 2476
127 Ga0373936_0006799 3300035113 Bacteria 4305
128 Ga0373936_0029184 3300035113 Bacteria 2170
129 Ga0373943_0001752 3300035170 Bacteria 9835
130 Ga0373943_0013573 3300035170 Bacteria 3681
131 Ga0373943_0027235 3300035170 Bacteria 2684
132 Ga0373955_0037720 3300035172 Bacteria 2570
133 Ga0373924_0011344 3300035410 Bacteria 3308
134 Ga0373935_0005301 3300035692 Bacteria 7589
135 Ga0373927_0000229 3300035695 Bacteria 44230
136 Ga0373933_0006936 3300035724 Bacteria 6175
137 Ga0373947_0009478 3300035725 Bacteria 5592
138 Ga0373947_0027160 3300035725 Bacteria 3349
139 Ga0373937_0027681 3300036401 Bacteria 5128
140 Ga0373925_0021613 3300037068 Bacteria 4690
141 Ga0373925_0087938 3300037068 Bacteria 2372
142 Ga0395900_0002059 3300037418 Bacteria 22556
143 Ga0395900_0251545 3300037418 Bacteria 1768
144 Ga0395898_0280842 3300037466 Bacteria 1588
145 Ga0395905_0119884 3300037471 Bacteria 2472
146 Ga0450904_000713 3300042139 Bacteria 5872
147 Ga0451577_0016704 3300042876 Bacteria 6788
148 Ga0466972_0002576 3300044658 Bacteria 8984
149 Ga0453683_0000024 3300044673 Bacteria 263554
150 Ga0466965_0033151 3300044683 Bacteria 2523
151 Ga0466964_0003206 3300044706 Bacteria 5949
152 Ga0453684_0002090 3300044712 Bacteria 50591
153 Ga0466967_0026195 3300045976 Bacteria 4825
154 Ga0466967_0186178 3300045976 Bacteria 1960
155 Ga0466967_0245034 3300045976 Unclassified 1710
156 Ga0495617_003998 3300046452 Bacteria 5419
157 Ga0495627_009530 3300046453 Bacteria 3569
158 Ga0495638_0000328 3300046460 Bacteria 60200
159 Ga0495650_0000324 3300046471 Bacteria 85449
160 Ga0495650_0000424 3300046471 Bacteria 68803
161 Ga0495650_0005161 3300046471 Bacteria 8605
162 Ga0495580_0006797 3300046472 Bacteria 9269
163 Ga0495580_0058941 3300046472 Bacteria 2699
164 Ga0495605_0000366 3300046474 Bacteria 43007
165 Ga0495605_0000394 3300046474 Bacteria 40242
166 Ga0495605_0010830 3300046474 Bacteria 5094
167 Ga0495605_0031491 3300046474 Bacteria 2709
168 Ga0495605_0053387 3300046474 Bacteria 1960
169 Ga0495584_0000185 3300046491 Bacteria 43958
170 Ga0495584_0002209 3300046491 Bacteria 11099
171 Ga0495584_0006098 3300046491 Bacteria 6344
172 Ga0495585_0000155 3300046492 Bacteria 73148
173 Ga0495585_0044870 3300046492 Bacteria 2468
174 Ga0495596_0000303 3300046500 Bacteria 32679
175 Ga0495596_0006113 3300046500 Bacteria 5596
176 Ga0495607_0000649 3300046501 Bacteria 33819
177 Ga0495607_0008702 3300046501 Bacteria 6915
178 Ga0495583_0000310 3300046506 Bacteria 77200
179 Ga0495583_0000336 3300046506 Bacteria 74005
180 Ga0495583_0001855 3300046506 Bacteria 19692
181 Ga0495606_0001279 3300046507 Bacteria 34843
182 Ga0495606_0006148 3300046507 Bacteria 11187
183 Ga0495606_0030608 3300046507 Bacteria 3757
184 Ga0495606_0049899 3300046507 Bacteria 2742
185 Ga0495616_0001016 3300046513 Bacteria 20088
186 Ga0495616_0003817 3300046513 Bacteria 9605
187 Ga0495616_0005509 3300046513 Bacteria 7775
188 Ga0495616_0012352 3300046513 Bacteria 4851
189 Ga0495616_0022563 3300046513 Bacteria 3399
190 Ga0495630_0072004 3300046517 Bacteria 2602
191 Ga0495631_0012753 3300046518 Bacteria 4096
192 Ga0495631_0014509 3300046518 Bacteria 3801
193 Ga0495632_0000145 3300046519 Bacteria 72949
194 Ga0495632_0014030 3300046519 Bacteria 4548
195 Ga0495643_0000447 3300046522 Bacteria 53267
196 Ga0495643_0006936 3300046522 Bacteria 7367
197 Ga0495643_0014508 3300046522 Bacteria 4686
198 Ga0495643_0015919 3300046522 Bacteria 4430
199 Ga0495644_0002023 3300046523 Bacteria 8157
200 Ga0495644_0004886 3300046523 Bacteria 5262
201 Ga0495644_0008582 3300046523 Bacteria 3935
202 Ga0495644_0032150 3300046523 Bacteria 1983
203 Ga0495648_0000622 3300046524 Bacteria 37974
204 Ga0495648_0003039 3300046524 Bacteria 15021
205 Ga0495648_0025091 3300046524 Bacteria 4043
206 Ga0495663_0002803 3300046525 Bacteria 5153
207 Ga0495642_0000744 3300046528 Bacteria 16162
208 Ga0495642_0016089 3300046528 Bacteria 2912
209 Ga0495642_0021585 3300046528 Bacteria 2533
210 Ga0495609_0000120 3300046538 Bacteria 88840
211 Ga0495609_0000152 3300046538 Bacteria 71861
212 Ga0495609_0000999 3300046538 Bacteria 20099
213 Ga0495609_0006638 3300046538 Bacteria 5875
214 Ga0495609_0016017 3300046538 Bacteria 3498
215 Ga0495597_0000337 3300046542 Bacteria 42017
216 Ga0495597_0000809 3300046542 Bacteria 24704
217 Ga0495622_0000102 3300046557 Bacteria 74694
218 Ga0495622_0027317 3300046557 Bacteria 2664
219 Ga0495633_0001607 3300046558 Bacteria 17096
220 Ga0495633_0003008 3300046558 Bacteria 11502
221 Ga0495633_0021574 3300046558 Bacteria 3219
222 Ga0495668_0000142 3300046616 Bacteria 107448
223 Ga0495668_0009142 3300046616 Bacteria 6106
224 Ga0495611_0001916 3300046648 Bacteria 9887
225 Ga0495611_0006144 3300046648 Bacteria 5125
226 Ga0495611_0009293 3300046648 Bacteria 4150
227 Ga0495625_0093238 3300046660 Bacteria 2079
228 Ga0495659_0000020 3300046664 Bacteria 73339
229 Ga0495659_0003854 3300046664 Bacteria 4765
230 Ga0495661_0001633 3300046665 Bacteria 18299
231 Ga0495661_0018632 3300046665 Bacteria 4560
232 Ga0495661_0028295 3300046665 Bacteria 3589
233 Ga0495588_0000163 3300046674 Bacteria 87487
234 Ga0495588_0003466 3300046674 Bacteria 6868
235 Ga0495588_0058623 3300046674 Bacteria 1990
236 Ga0495669_0001013 3300046684 Bacteria 11732
237 Ga0495669_0007876 3300046684 Bacteria 4470
238 Ga0495669_0038315 3300046684 Bacteria 2123
239 Ga0495670_0061853 3300046691 Bacteria 1882
240 Ga0495671_0000134 3300046692 Bacteria 65824
241 Ga0495649_0010813 3300046694 Bacteria 5375
242 Ga0495589_0000080 3300046794 Bacteria 89150
243 Ga0495589_0000205 3300046794 Bacteria 50703
244 Ga0495589_0085988 3300046794 Bacteria 1528
245 Ga0495660_0000112 3300046810 Bacteria 86770
246 Ga0495660_0014607 3300046810 Bacteria 4541
247 Ga0495660_0022566 3300046810 Bacteria 3593
248 Ga0495636_0006567 3300047318 Bacteria 4571
249 Ga0495636_0025544 3300047318 Bacteria 2399
250 Ga0495674_0022349 3300047319 Bacteria 5834
251 Ga0495674_0046114 3300047319 Bacteria 3869
252 Ga0495674_0105069 3300047319 Bacteria 2400
253 Ga0495672_0000157 3300047320 Bacteria 98544
254 Ga0495672_0000288 3300047320 Bacteria 69415
255 Ga0495672_0000526 3300047320 Bacteria 43738
256 Ga0495672_0001592 3300047320 Bacteria 22154
257 Ga0495672_0003760 3300047320 Bacteria 12786
258 Ga0495683_0000472 3300047323 Bacteria 31230
259 Ga0495683_0002033 3300047323 Bacteria 12532
260 Ga0495683_0010689 3300047323 Bacteria 4843
261 Ga0495687_000201 3300047443 Bacteria 85049
262 Ga0495687_000208 3300047443 Bacteria 84057
263 Ga0495687_000290 3300047443 Bacteria 66071
264 Ga0495687_000370 3300047443 Bacteria 56035
265 Ga0495687_014843 3300047443 Bacteria 3984
266 Ga0495677_0000048 3300047445 Bacteria 69118
267 Ga0495677_0005320 3300047445 Bacteria 4882
268 Ga0495677_0013778 3300047445 Bacteria 2942
269 Ga0495681_0000147 3300047470 Bacteria 59493
270 Ga0495681_0012810 3300047470 Bacteria 4905
271 Ga0495686_0000396 3300047472 Bacteria 69117
272 Ga0495686_0000437 3300047472 Bacteria 64388
273 Ga0495686_0049972 3300047472 Bacteria 2629
274 Ga0495602_0030330 3300048088 Bacteria 5131
275 Ga0495626_0000180 3300048091 Bacteria 76683
276 Ga0495626_0002226 3300048091 Bacteria 13910
277 Ga0495626_0006650 3300048091 Bacteria 6555
278 Ga0495626_0027865 3300048091 Bacteria 2743
279 Ga0496102_0000300 3300048905 Bacteria 63230
280 Ga0496102_0000489 3300048905 Bacteria 43805
281 Ga0496102_0200967 3300048905 Unclassified 1879
282 Ga0496103_0003857 3300048906 Bacteria 9121
283 Ga0496104_0077313 3300048907 Unclassified 3171
284 Ga0496106_0009507 3300048909 Bacteria 7183
285 Ga0496108_0020274 3300048911 Bacteria 5464
286 Ga0496112_0078273 3300048915 Bacteria 3270
287 Ga0496113_0033541 3300048916 Bacteria 3739
288 Ga0496115_0027086 3300048918 Bacteria 4480
289 Ga0496115_0032038 3300048918 Unclassified 4146
290 Ga0496115_0182667 3300048918 Bacteria 1733
291 Ga0496122_0120187 3300048925 Bacteria 1696
292 Ga0496126_0010247 3300048929 Bacteria 9853
293 Ga0495678_000624 3300049459 Bacteria 32944
294 Ga0495678_001098 3300049459 Bacteria 22819
295 Ga0495678_010782 3300049459 Bacteria 4414
296 Ga0495682_0000151 3300049460 Bacteria 59546
297 Ga0495682_0000836 3300049460 Bacteria 19308
298 Ga0501031_0034490 3300049568 Bacteria 3303
299 Ga0501036_0032540 3300049572 Bacteria 4407
300 Ga0501037_0106781 3300049573 Bacteria 2018
301 Ga0501040_0030387 3300049576 Bacteria 3650
302 Ga0501249_001702 3300049679 Bacteria 4480
303 Ga0501245_000234 3300049708 Bacteria 6292
304 Ga0501269_000003 3300049766 Bacteria 111299
305 nmdc:mga0k408_61103_c1 3300050493 Bacteria 2190
306 nmdc:mga08y16_3_c1 3300050511 Bacteria 936907
307 Ga0495601_0039030 3300053077 Bacteria 2972
308 Ga0500586_000128 3300053145 Bacteria 13790
309 Ga0466962_0058503 3300061719 Bacteria 1839
310 2643799367 2643221556 Bacteria 7251154
311 2644472463 2643221684 Bacteria 7145183
312 8047676137 8047673197 Bacteria 7395230
313 Ga0070717_10097337
314 LJNas_1000808
315 JGI25152J39213_1000042
316 JGI25159J45721_1000813
317 Ga0055525_1000147
318 Ga0055526_1000356
319 Ga0055537_1000069
320 Ga0055534_1000111
321 Ga0055528_1000101
322 Ga0055543_1001382
323 Ga0065165_1000255
324 Ga0065165_1001743
325 Ga0065715_10016429
326 Ga0070690_100037177
327 Ga0070709_10000342
328 Ga0070709_10028418
329 Ga0070709_10028860
330 Ga0070714_100000231
331 Ga0070714_100040314
332 Ga0070713_100000349
333 Ga0070713_100000464
334 Ga0070713_100007744
335 Ga0070713_100009782
336 Ga0070713_100027388
337 Ga0070713_100045957
338 Ga0070710_10012685
339 Ga0070710_10015228
340 Ga0070711_100003499
341 Ga0070711_100003874
342 Ga0070711_100006200
343 Ga0070694_100050031
344 Ga0070708_100034096
345 Ga0070681_10017801
346 Ga0070706_100036413
347 Ga0070706_100094271
348 Ga0070699_100025429
349 Ga0070679_100043848
350 Ga0070697_100002966
351 Ga0070697_100077720
352 Ga0070686_100039885
353 Ga0070693_100119392
354 Ga0068855_100105614
355 Ga0068857_100080105
356 Ga0068863_100027217
357 Ga0070717_10001227
358 Ga0070717_10006280
359 Ga0070717_10087745
360 Ga0070715_10004165
361 Ga0070715_10006895
362 Ga0070716_100008396
363 Ga0070716_100048858
364 Ga0070716_100054056
365 Ga0070712_100000401
366 Ga0070712_100000586
367 Ga0070712_100003006
368 Ga0070712_100016090
369 Ga0075366_10034764
370 Ga0075428_100000003
371 Ga0075436_100106522
372 Ga0105244_10000294
373 Ga0105240_10033712
374 Ga0111539_10000001
375 Ga0114129_10138342
376 Ga0105248_10140388
377 Ga0157372_10050540
378 Ga0157372_10158015
379 Ga0163163_10002629
380 Ga0157380_10209041
381 Ga0224572_1006427
382 Ga0228598_1000392
383 Ga0209436_106771
384 Ga0209565_1000158
385 Ga0209673_1000290
386 Ga0209130_1000239
387 Ga0209675_1000152
388 Ga0209564_1000339
389 Ga0209256_1000278
390 Ga0207655_1000691
391 Ga0207692_10007889
392 Ga0207692_10017957
393 Ga0207692_10074614
394 Ga0207685_10005911
395 Ga0207699_10003310
396 Ga0207699_10060916
397 Ga0207699_10075704
398 Ga0207684_10057475
399 Ga0207684_10160324
400 Ga0207707_10069503
401 Ga0207693_10000142
402 Ga0207693_10000215
403 Ga0207693_10002184
404 Ga0207693_10012264
405 Ga0207663_10000512
406 Ga0207663_10003671
407 Ga0207652_10032119
408 Ga0207646_10155295
409 Ga0207700_10000200
410 Ga0207700_10005255
411 Ga0207700_10005553
412 Ga0207700_10009464
413 Ga0207664_10000033
414 Ga0207664_10047224
415 Ga0207665_10015989
416 Ga0207665_10024979
417 Ga0207665_10049299
418 Ga0207667_10160581
419 Ga0207677_10009387
420 Ga0207702_10000479
421 Ga0207702_10048539
422 Ga0207641_10055565
423 Ga0207674_10075762
424 Ga0207683_10091352
425 Ga0207428_10000002
426 Ga0265356_1000078
427 Ga0265338_10002910
428 Ga0265338_10035271
429 Ga0265760_10006515
430 Ga0265760_10009997
431 Ga0265760_10010649
432 Ga0265340_10032408
433 Ga0265339_10008695
434 Ga0265313_10006256
435 Ga0265314_10021008
436 Ga0265342_10021252
437 Ga0307411_10080949
438 Ga0316212_1002858
439 Ga0373936_0006799
440 Ga0373936_0029184
441 Ga0373943_0001752
442 Ga0373943_0013573
443 Ga0373943_0027235
444 Ga0373955_0037720
445 Ga0373924_0011344
446 Ga0373935_0005301
447 Ga0373927_0000229
448 Ga0373933_0006936
449 Ga0373947_0009478
450 Ga0373947_0027160
451 Ga0373937_0027681
452 Ga0373925_0021613
453 Ga0373925_0087938
454 Ga0395900_0002059
455 Ga0395900_0251545
456 Ga0395898_0280842
457 Ga0395905_0119884
458 Ga0450904_000713
459 Ga0451577_0016704
460 Ga0466972_0002576
461 Ga0453683_0000024
462 Ga0466965_0033151
463 Ga0466964_0003206
464 Ga0453684_0002090
465 Ga0466967_0026195
466 Ga0466967_0186178
467 Ga0466967_0245034
468 Ga0495617_003998
469 Ga0495627_009530
470 Ga0495638_0000328
471 Ga0495650_0000324
472 Ga0495650_0000424
473 Ga0495650_0005161
474 Ga0495580_0006797
475 Ga0495580_0058941
476 Ga0495605_0000366
477 Ga0495605_0000394
478 Ga0495605_0010830
479 Ga0495605_0031491
480 Ga0495605_0053387
481 Ga0495584_0000185
482 Ga0495584_0002209
483 Ga0495584_0006098
484 Ga0495585_0000155
485 Ga0495585_0044870
486 Ga0495596_0000303
487 Ga0495596_0006113
488 Ga0495607_0000649
489 Ga0495607_0008702
490 Ga0495583_0000310
491 Ga0495583_0000336
492 Ga0495583_0001855
493 Ga0495606_0001279
494 Ga0495606_0006148
495 Ga0495606_0030608
496 Ga0495606_0049899
497 Ga0495616_0001016
498 Ga0495616_0003817
499 Ga0495616_0005509
500 Ga0495616_0012352
501 Ga0495616_0022563
502 Ga0495630_0072004
503 Ga0495631_0012753
504 Ga0495631_0014509
505 Ga0495632_0000145
506 Ga0495632_0014030
507 Ga0495643_0000447
508 Ga0495643_0006936
509 Ga0495643_0014508
510 Ga0495643_0015919
511 Ga0495644_0002023
512 Ga0495644_0004886
513 Ga0495644_0008582
514 Ga0495644_0032150
515 Ga0495648_0000622
516 Ga0495648_0003039
517 Ga0495648_0025091
518 Ga0495663_0002803
519 Ga0495642_0000744
520 Ga0495642_0016089
521 Ga0495642_0021585
522 Ga0495609_0000120
523 Ga0495609_0000152
524 Ga0495609_0000999
525 Ga0495609_0006638
526 Ga0495609_0016017
527 Ga0495597_0000337
528 Ga0495597_0000809
529 Ga0495622_0000102
530 Ga0495622_0027317
531 Ga0495633_0001607
532 Ga0495633_0003008
533 Ga0495633_0021574
534 Ga0495668_0000142
535 Ga0495668_0009142
536 Ga0495611_0001916
537 Ga0495611_0006144
538 Ga0495611_0009293
539 Ga0495625_0093238
540 Ga0495659_0000020
541 Ga0495659_0003854
542 Ga0495661_0001633
543 Ga0495661_0018632
544 Ga0495661_0028295
545 Ga0495588_0000163
546 Ga0495588_0003466
547 Ga0495588_0058623
548 Ga0495669_0001013
549 Ga0495669_0007876
550 Ga0495669_0038315
551 Ga0495670_0061853
552 Ga0495671_0000134
553 Ga0495649_0010813
554 Ga0495589_0000080
555 Ga0495589_0000205
556 Ga0495589_0085988
557 Ga0495660_0000112
558 Ga0495660_0014607
559 Ga0495660_0022566
560 Ga0495636_0006567
561 Ga0495636_0025544
562 Ga0495674_0022349
563 Ga0495674_0046114
564 Ga0495674_0105069
565 Ga0495672_0000157
566 Ga0495672_0000288
567 Ga0495672_0000526
568 Ga0495672_0001592
569 Ga0495672_0003760
570 Ga0495683_0000472
571 Ga0495683_0002033
572 Ga0495683_0010689
573 Ga0495687_000201
574 Ga0495687_000208
575 Ga0495687_000290
576 Ga0495687_000370
577 Ga0495687_014843
578 Ga0495677_0000048
579 Ga0495677_0005320
580 Ga0495677_0013778
581 Ga0495681_0000147
582 Ga0495681_0012810
583 Ga0495686_0000396
584 Ga0495686_0000437
585 Ga0495686_0049972
586 Ga0495602_0030330
587 Ga0495626_0000180
588 Ga0495626_0002226
589 Ga0495626_0006650
590 Ga0495626_0027865
591 Ga0496102_0000300
592 Ga0496102_0000489
593 Ga0496102_0200967
594 Ga0496103_0003857
595 Ga0496104_0077313
596 Ga0496106_0009507
597 Ga0496108_0020274
598 Ga0496112_0078273
599 Ga0496113_0033541
600 Ga0496115_0027086
601 Ga0496115_0032038
602 Ga0496115_0182667
603 Ga0496122_0120187
604 Ga0496126_0010247
605 Ga0495678_000624
606 Ga0495678_001098
607 Ga0495678_010782
608 Ga0495682_0000151
609 Ga0495682_0000836
610 Ga0501031_0034490
611 Ga0501036_0032540
612 Ga0501037_0106781
613 Ga0501040_0030387
614 Ga0501249_001702
615 Ga0501245_000234
616 Ga0501269_000003
617 nmdc:mga0k408_61103_c1
618 nmdc:mga08y16_3_c1
619 Ga0495601_0039030
620 Ga0500586_000128
621 Ga0466962_0058503
622 2643799367
623 2644472463
624 8047676137

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01523

PmbA_TldD_1st

PmbA/TldA metallopeptidase domain 1

46

110

0.97

PF19289

PmbA_TldD_3rd

PmbA/TldA metallopeptidase C-terminal domain

249

483

0.94

PF19290

PmbA_TldD_2nd

PmbA/TldA metallopeptidase central domain

146

242

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vl4-assembly1.cif.gz_B crystal structure of a putative modulator of a dna gyrase (tm0727) from thermotoga maritima msb8 at 1.95 a resolution 0.8942 7 459
1vl4-assembly1.cif.gz_B crystal structure of a putative modulator of a dna gyrase (tm0727) from thermotoga maritima msb8 at 1.95 a resolution 0.8902 7 459
6j6a-assembly1.cif.gz_B crystal structure of tlde from thermococcus kodakarensis 0.8845 7 459
6j6a-assembly1.cif.gz_B crystal structure of tlde from thermococcus kodakarensis 0.8769 7 459
3qtd-assembly2.cif.gz_B crystal structure of putative modulator of gyrase (pmba) from pseudomonas aeruginosa pao1 0.8625 4 459
ID Description Score Start End Superfamily
af_P71898_23_321_3.30.2290.10 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.8179 23 309 3.30.2290.10
3qtdD01 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.8135 4 220 3.30.2290.10
3tv9A01 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.8131 3 221 3.30.2290.10
1vpbA01 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.8098 1 216 3.30.2290.10
1vl4B01 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.8061 1 215 3.30.2290.10
ID Description Score Start End GO Terms
AF-A0A2W4JQJ4-F1-model_v4 TldD/PmbA family protein 0.9755 1 464 GO:0006508
GO:0008237
AF-A0A2W4JQJ4-F1-model_v4 TldD/PmbA family protein 0.9734 1 464 GO:0006508
GO:0008237
AF-A0A2V9SAA3-F1-model_v4 Metalloprotease TldD/E N-terminal domain-containing protein 0.9733 1 90 GO:0006508
GO:0008237
AF-A0A2V9KN58-F1-model_v4 TldD/PmbA family protein 0.9714 2 244 GO:0006508
GO:0008237
AF-A0A3M2FZA5-F1-model_v4 TldD/PmbA family protein 0.9659 1 464 GO:0006508
GO:0008237

Map