F401529

General Info

Members Datasets Scaffolds Average Seq Length
312 182 624 235

Family's Representative Sequence

Representative Sequence 3300005290|Ga0065712_10076069|Ga0065712_100760695
Length 274
Sequence MLSNCNHRRAAQSHSGPQSAARIAADRPITLFTQFTEVSHMLRYFSLALCFVLGSTALRAEDKEHGRLENCGVVMQEVLDVPDNIPQELLETAECVIVIPSMTKVALGIGGSYGRGAMVCRTGKGFTGPWGAPAMYALDGGSVGFQIGAESTDVVLLVMNKRGVDALLSSKVKLGAGASVAAGPKGRNLEASTDATMRAEILSYSRARGLFAGVSLEGTSLRPDNDANREVYGRKLTARTIITGAKIPVPESAQKLVAALEKGAPYNESKRTTR

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
41 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
42 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
56 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
57 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
61 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
62 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
63 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
66 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
70 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
72 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
73 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
83 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
123 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
124 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
127 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
130 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
131 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
132 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
133 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
134 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
135 3300036457 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
138 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
141 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
142 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
143 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
144 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
145 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
146 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
147 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
148 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
149 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
150 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
151 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
152 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
153 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
154 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
155 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
156 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
157 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
158 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
159 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
160 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
161 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
162 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
163 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
164 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
165 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
166 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
167 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
168 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
169 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
170 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
171 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
172 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
173 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
174 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
180 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
181 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
182 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.04
Metatranscriptomes 0.96
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.32
Nodule 0
Rhizoplane 1.92
Rhizosphere 97.76
Stem 0
Stem Tuber 0
Unclassified 22.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10076069 3300005290 Bacteria 3739
2 Ga0065712_10027552 3300005290 Bacteria 1690
3 Ga0065707_10099072 3300005295 Bacteria 3029
4 Ga0070658_10055236 3300005327 Bacteria 3226
5 Ga0070658_10617841 3300005327 Unclassified 940
6 Ga0070676_10009399 3300005328 Bacteria 5282
7 Ga0070683_100528803 3300005329 Bacteria 1127
8 Ga0070690_100006852 3300005330 Bacteria 6481
9 Ga0070670_100009712 3300005331 Bacteria 8215
10 Ga0070677_10156610 3300005333 Bacteria 1065
11 Ga0068869_100205775 3300005334 Bacteria 1554
12 Ga0070666_10148295 3300005335 Bacteria 1636
13 Ga0070680_100017349 3300005336 Bacteria 5676
14 Ga0070680_100215855 3300005336 Bacteria 1619
15 Ga0070660_100004199 3300005339 Bacteria 9947
16 Ga0070660_100132969 3300005339 Unclassified 1992
17 Ga0070660_100341124 3300005339 Bacteria 1233
18 Ga0070689_100207970 3300005340 Unclassified 1601
19 Ga0070687_100336574 3300005343 Bacteria 969
20 Ga0070669_100022908 3300005353 Bacteria 4467
21 Ga0070669_100124128 3300005353 Bacteria 1974
22 Ga0070675_100025530 3300005354 Bacteria 4737
23 Ga0070675_100076018 3300005354 Unclassified 2792
24 Ga0070674_100014928 3300005356 Bacteria 4837
25 Ga0070674_100026775 3300005356 Unclassified 3771
26 Ga0070688_100581480 3300005365 Bacteria 855
27 Ga0070659_100092762 3300005366 Unclassified 2422
28 Ga0070659_100106171 3300005366 Bacteria 2264
29 Ga0070659_100748925 3300005366 Bacteria 847
30 Ga0070703_10000565 3300005406 Bacteria 13521
31 Ga0070703_10132006 3300005406 Bacteria 918
32 Ga0070709_10146739 3300005434 Unclassified 1626
33 Ga0070713_100214515 3300005436 Bacteria 1744
34 Ga0070701_10007635 3300005438 Bacteria 4635
35 Ga0070701_10010857 3300005438 Unclassified 4045
36 Ga0070701_10034918 3300005438 Bacteria 2522
37 Ga0070705_100032749 3300005440 Bacteria 2890
38 Ga0070705_100127926 3300005440 Unclassified 1652
39 Ga0070700_100003709 3300005441 Bacteria 7892
40 Ga0070694_100008609 3300005444 Bacteria 6248
41 Ga0070694_100037533 3300005444 Bacteria 3213
42 Ga0070694_100054447 3300005444 Bacteria 2710
43 Ga0070694_100082865 3300005444 Unclassified 2234
44 Ga0070708_100067586 3300005445 Unclassified 3210
45 Ga0070708_100188241 3300005445 Unclassified 1930
46 Ga0070708_100645313 3300005445 Bacteria 998
47 Ga0070678_100517828 3300005456 Unclassified 1055
48 Ga0070681_10037179 3300005458 Bacteria 4887
49 Ga0070681_10124911 3300005458 Bacteria 2506
50 Ga0070681_10217270 3300005458 Bacteria 1827
51 Ga0068867_100008841 3300005459 Bacteria 7109
52 Ga0068867_100318710 3300005459 Bacteria 1287
53 Ga0070685_10447937 3300005466 Bacteria 904
54 Ga0070706_100001578 3300005467 Bacteria 23781
55 Ga0070706_100003496 3300005467 Bacteria 15438
56 Ga0070706_100096990 3300005467 Bacteria 2738
57 Ga0070707_100007743 3300005468 Bacteria 9979
58 Ga0070707_100016193 3300005468 Bacteria 6997
59 Ga0070698_100155197 3300005471 Bacteria 2235
60 Ga0070698_100522112 3300005471 Bacteria 1126
61 Ga0070698_100650802 3300005471 Bacteria 995
62 Ga0070698_100798157 3300005471 Bacteria 888
63 Ga0070699_100008392 3300005518 Bacteria 8950
64 Ga0070699_100011123 3300005518 Bacteria 7777
65 Ga0070699_100037310 3300005518 Bacteria 4204
66 Ga0070679_100015103 3300005530 Bacteria 7421
67 Ga0070679_100046173 3300005530 Unclassified 4341
68 Ga0070679_100071032 3300005530 Bacteria 3472
69 Ga0070697_100000565 3300005536 Bacteria 27922
70 Ga0070697_100200015 3300005536 Bacteria 1698
71 Ga0070697_100200590 3300005536 Bacteria 1696
72 Ga0070697_100368915 3300005536 Bacteria 1242
73 Ga0068853_100273184 3300005539 Bacteria 1557
74 Ga0068853_100488183 3300005539 Bacteria 1162
75 Ga0070672_100063558 3300005543 Unclassified 2915
76 Ga0070695_100000591 3300005545 Bacteria 19166
77 Ga0070695_100004853 3300005545 Bacteria 7917
78 Ga0070695_100012739 3300005545 Bacteria 5048
79 Ga0070695_100015934 3300005545 Bacteria 4544
80 Ga0070696_100008370 3300005546 Bacteria 6920
81 Ga0070696_100018948 3300005546 Bacteria 4659
82 Ga0070696_100098648 3300005546 Bacteria 2090
83 Ga0070696_100123532 3300005546 Bacteria 1876
84 Ga0070693_100000060 3300005547 Bacteria 43100
85 Ga0070665_100033112 3300005548 Bacteria 5200
86 Ga0070704_100001221 3300005549 Bacteria 13522
87 Ga0070704_100013152 3300005549 Bacteria 5127
88 Ga0070704_100108590 3300005549 Bacteria 2107
89 Ga0070704_100609997 3300005549 Unclassified 960
90 Ga0068855_100014456 3300005563 Bacteria 9504
91 Ga0068855_100070023 3300005563 Bacteria 4082
92 Ga0070664_100016119 3300005564 Bacteria 6125
93 Ga0068854_100427792 3300005578 Unclassified 1101
94 Ga0068856_100184139 3300005614 Unclassified 2102
95 Ga0068859_100002791 3300005617 Bacteria 17698
96 Ga0068859_100030729 3300005617 Bacteria 5390
97 Ga0068859_100068417 3300005617 Bacteria 3585
98 Ga0068864_100007414 3300005618 Bacteria 9032
99 Ga0068864_100015639 3300005618 Bacteria 6313
100 Ga0068864_100295206 3300005618 Bacteria 1516
101 Ga0068864_100301980 3300005618 Bacteria 1499
102 Ga0068861_100026471 3300005719 Bacteria 4216
103 Ga0068861_100038595 3300005719 Bacteria 3559
104 Ga0068863_100062757 3300005841 Bacteria 3514
105 Ga0068858_100020731 3300005842 Bacteria 6140
106 Ga0068858_100096378 3300005842 Bacteria 2756
107 Ga0068858_100110661 3300005842 Bacteria 2564
108 Ga0068862_100110387 3300005844 Unclassified 2413
109 Ga0070715_10388869 3300006163 Bacteria 772
110 Ga0070716_100003519 3300006173 Bacteria 7382
111 Ga0070712_100461949 3300006175 Bacteria 1059
112 Ga0097621_100005403 3300006237 Bacteria 9003
113 Ga0068871_100027136 3300006358 Bacteria 4475
114 Ga0075433_10375181 3300006852 Unclassified 1256
115 Ga0075433_10653412 3300006852 Bacteria 922
116 Ga0075434_100162817 3300006871 Bacteria 2251
117 Ga0075434_100251200 3300006871 Bacteria 1788
118 Ga0068865_100004885 3300006881 Bacteria 8104
119 Ga0068865_100010832 3300006881 Bacteria 5688
120 Ga0075436_100015259 3300006914 Bacteria 5261
121 Ga0097620_100002791 3300006931 Bacteria 17698
122 Ga0097620_100030728 3300006931 Bacteria 5390
123 Ga0097620_100068417 3300006931 Bacteria 3585
124 Ga0075435_100029492 3300007076 Bacteria 4306
125 Ga0099794_10005812 3300007265 Bacteria 4973
126 Ga0105240_10015623 3300009093 Bacteria 10309
127 Ga0105240_10046460 3300009093 Bacteria 5501
128 Ga0105240_10142420 3300009093 Bacteria 2865
129 Ga0111539_10013369 3300009094 Bacteria 10260
130 Ga0111539_10047903 3300009094 Bacteria 5106
131 Ga0111539_10051347 3300009094 Bacteria 4912
132 Ga0105245_10048878 3300009098 Bacteria 3785
133 Ga0105245_10202286 3300009098 Unclassified 1908
134 Ga0105245_10429813 3300009098 Unclassified 1325
135 Ga0114129_10040104 3300009147 Bacteria 6602
136 Ga0105243_10058990 3300009148 Bacteria 3060
137 Ga0105242_10001551 3300009176 Bacteria 18075
138 Ga0105242_10015148 3300009176 Bacteria 5986
139 Ga0105242_10073595 3300009176 Unclassified 2841
140 Ga0105248_10023938 3300009177 Bacteria 6788
141 Ga0105248_10094398 3300009177 Bacteria 3368
142 Ga0105248_10297111 3300009177 Bacteria 1819
143 Ga0105248_10607921 3300009177 Bacteria 1233
144 Ga0105238_10058585 3300009551 Bacteria 3860
145 Ga0105238_10071761 3300009551 Bacteria 3460
146 Ga0105238_10343703 3300009551 Unclassified 1480
147 Ga0105249_10130089 3300009553 Unclassified 2402
148 Ga0105249_10744307 3300009553 Bacteria 1042
149 Ga0157374_10001975 3300013296 Bacteria 17206
150 Ga0157374_10009617 3300013296 Bacteria 8306
151 Ga0157378_10003083 3300013297 Bacteria 14811
152 Ga0163163_10013449 3300014325 Bacteria 7496
153 Ga0163163_10015647 3300014325 Bacteria 7020
154 Ga0163163_10556621 3300014325 Bacteria 1209
155 Ga0157380_10096454 3300014326 Unclassified 2452
156 Ga0157380_10261796 3300014326 Bacteria 1571
157 Ga0157380_10467335 3300014326 Bacteria 1216
158 Ga0157379_10379395 3300014968 Bacteria 1297
159 Ga0157379_10813680 3300014968 Bacteria 882
160 Ga0157376_10029644 3300014969 Bacteria 4360
161 Ga0157376_10053502 3300014969 Bacteria 3361
162 Ga0224572_1009417 3300024225 Unclassified 1822
163 Ga0207653_10001331 3300025885 Bacteria 8023
164 Ga0207642_10011391 3300025899 Unclassified 3171
165 Ga0207688_10212653 3300025901 Bacteria 1162
166 Ga0207680_10202302 3300025903 Unclassified 1354
167 Ga0207645_10023799 3300025907 Unclassified 3977
168 Ga0207645_10029880 3300025907 Bacteria 3512
169 Ga0207705_10118284 3300025909 Bacteria 1964
170 Ga0207684_10006412 3300025910 Bacteria 10725
171 Ga0207684_10035979 3300025910 Bacteria 4203
172 Ga0207684_10040942 3300025910 Unclassified 3929
173 Ga0207695_10052250 3300025913 Bacteria 4282
174 Ga0207695_10054727 3300025913 Bacteria 4164
175 Ga0207695_10108547 3300025913 Bacteria 2759
176 Ga0207693_10306046 3300025915 Bacteria 1244
177 Ga0207663_10224901 3300025916 Bacteria 1367
178 Ga0207662_10176280 3300025918 Unclassified 1374
179 Ga0207657_10005608 3300025919 Bacteria 13098
180 Ga0207657_10010438 3300025919 Bacteria 9269
181 Ga0207652_10033053 3300025921 Unclassified 4354
182 Ga0207652_10067888 3300025921 Bacteria 3092
183 Ga0207652_10090686 3300025921 Bacteria 2686
184 Ga0207646_10000005 3300025922 Bacteria 523896
185 Ga0207646_10068512 3300025922 Bacteria 3169
186 Ga0207646_10106897 3300025922 Bacteria 2510
187 Ga0207646_10325085 3300025922 Bacteria 1390
188 Ga0207650_10051692 3300025925 Bacteria 3042
189 Ga0207659_10002572 3300025926 Bacteria 10802
190 Ga0207659_10034326 3300025926 Unclassified 3497
191 Ga0207687_10170502 3300025927 Bacteria 1678
192 Ga0207664_10151384 3300025929 Bacteria 1971
193 Ga0207690_10170694 3300025932 Bacteria 1629
194 Ga0207669_10050258 3300025937 Unclassified 2491
195 Ga0207669_10721221 3300025937 Unclassified 821
196 Ga0207704_10006024 3300025938 Bacteria 5621
197 Ga0207704_10038387 3300025938 Bacteria 2777
198 Ga0207704_10076218 3300025938 Bacteria 2148
199 Ga0207665_10001146 3300025939 Bacteria 17833
200 Ga0207711_10147299 3300025941 Bacteria 2122
201 Ga0207711_10202286 3300025941 Unclassified 1813
202 Ga0207711_10578006 3300025941 Bacteria 1048
203 Ga0207711_10882472 3300025941 Unclassified 832
204 Ga0207679_10028919 3300025945 Unclassified 3854
205 Ga0207667_10193187 3300025949 Unclassified 2088
206 Ga0207651_10074683 3300025960 Unclassified 2415
207 Ga0207651_10130294 3300025960 Unclassified 1924
208 Ga0207640_10307144 3300025981 Bacteria 1257
209 Ga0207658_10205058 3300025986 Bacteria 1649
210 Ga0207703_10013280 3300026035 Bacteria 6415
211 Ga0207703_10063119 3300026035 Bacteria 3036
212 Ga0207639_10087774 3300026041 Unclassified 2480
213 Ga0207639_10833368 3300026041 Bacteria 860
214 Ga0207708_10004152 3300026075 Bacteria 10655
215 Ga0207708_10020397 3300026075 Bacteria 4999
216 Ga0207702_10253851 3300026078 Unclassified 1652
217 Ga0207648_10001404 3300026089 Bacteria 26508
218 Ga0207648_10004290 3300026089 Bacteria 14693
219 Ga0207648_10224346 3300026089 Bacteria 1671
220 Ga0207648_10482038 3300026089 Unclassified 1133
221 Ga0207676_10009812 3300026095 Bacteria 6808
222 Ga0207676_10059124 3300026095 Bacteria 3026
223 Ga0207675_100026961 3300026118 Bacteria 5349
224 Ga0207675_100030537 3300026118 Bacteria 5020
225 Ga0207675_100417184 3300026118 Bacteria 1325
226 Ga0207683_10064967 3300026121 Unclassified 3216
227 Ga0207683_10331307 3300026121 Unclassified 1395
228 Ga0207428_10048786 3300027907 Bacteria 3395
229 Ga0207428_10328212 3300027907 Unclassified 1129
230 Ga0268266_10247667 3300028379 Bacteria 1647
231 Ga0268264_10098011 3300028381 Unclassified 2542
232 Ga0265336_10089015 3300028666 Bacteria 920
233 Ga0265760_10003190 3300031090 Bacteria 4799
234 Ga0265332_10050971 3300031238 Bacteria 1778
235 Ga0307408_100038041 3300031548 Bacteria 3393
236 Ga0265314_10026153 3300031711 Bacteria 4389
237 Ga0307410_10281250 3300031852 Unclassified 1306
238 Ga0307416_100512167 3300032002 Bacteria 1266
239 Ga0373944_0063071 3300035089 Bacteria 1193
240 Ga0373936_0092272 3300035113 Bacteria 1271
241 Ga0373943_0090452 3300035170 Bacteria 1585
242 Ga0373943_0129759 3300035170 Bacteria 1348
243 Ga0373946_0032292 3300035171 Bacteria 2102
244 Ga0373924_0065156 3300035410 Bacteria 1530
245 Ga0373947_0170721 3300035725 Unclassified 1411
246 Ga0265778_020557 3300036457 Unclassified 813
247 Ga0265778_022832 3300036457 Unclassified 780
248 Ga0451577_0000290 3300042876 Bacteria 97706
249 Ga0451577_0006815 3300042876 Bacteria 11321
250 Ga0453683_0014547 3300044673 Bacteria 5105
251 Ga0453684_0000104 3300044712 Bacteria 365431
252 Ga0453684_0284577 3300044712 Unclassified 1884
253 Ga0451576_0006148 3300045051 Bacteria 14789
254 Ga0495592_0081967 3300046454 Bacteria 2332
255 Ga0495651_0001481 3300046462 Bacteria 18160
256 Ga0495653_0040830 3300046463 Bacteria 3624
257 Ga0495580_0236793 3300046472 Unclassified 1252
258 Ga0495608_0025147 3300046511 Unclassified 4065
259 Ga0495618_0052354 3300046514 Unclassified 2580
260 Ga0495628_0000167 3300046516 Bacteria 57173
261 Ga0495630_0029222 3300046517 Bacteria 4097
262 Ga0495666_0171959 3300046526 Unclassified 1002
263 Ga0495652_0005534 3300046529 Bacteria 11883
264 Ga0495652_0345805 3300046529 Unclassified 1067
265 Ga0495665_0098915 3300046531 Unclassified 1532
266 Ga0495640_0077963 3300046533 Bacteria 2208
267 Ga0495640_0080046 3300046533 Bacteria 2174
268 Ga0495640_0463440 3300046533 Unclassified 773
269 Ga0495587_0017906 3300046536 Unclassified 4394
270 Ga0495645_0001627 3300046543 Bacteria 15209
271 Ga0495645_0092330 3300046543 Bacteria 2162
272 Ga0495667_0017725 3300046559 Unclassified 4809
273 Ga0495634_0051400 3300046642 Unclassified 2765
274 Ga0495635_0061034 3300046663 Bacteria 2590
275 Ga0495657_0005766 3300046675 Bacteria 9752
276 Ga0495599_0000850 3300046678 Bacteria 17129
277 Ga0495623_0235695 3300046679 Unclassified 1036
278 Ga0495647_0124342 3300046681 Bacteria 1088
279 Ga0495669_0001462 3300046684 Bacteria 9740
280 Ga0495613_0041973 3300046689 Bacteria 3386
281 Ga0495600_0171722 3300046809 Bacteria 1399
282 Ga0495604_0000934 3300047317 Bacteria 24332
283 Ga0495674_0006106 3300047319 Bacteria 11569
284 Ga0495680_0003912 3300047322 Bacteria 14410
285 Ga0495675_0000289 3300047444 Bacteria 36410
286 Ga0495675_0314686 3300047444 Unclassified 927
287 Ga0495602_0004170 3300048088 Bacteria 15040
288 Ga0495602_0106311 3300048088 Unclassified 2291
289 Ga0496108_0005385 3300048911 Bacteria 10343
290 Ga0496110_0494506 3300048913 Bacteria 1114
291 Ga0496112_0002883 3300048915 Bacteria 13993
292 Ga0496112_0818467 3300048915 Unclassified 856
293 Ga0496114_0629429 3300048917 Bacteria 945
294 Ga0496115_0055084 3300048918 Unclassified 3194
295 nmdc:mga05p37_102216_c1 3300050507 Bacteria 3530
296 nmdc:mga05p37_243483_c1 3300050507 Bacteria 2161
297 nmdc:mga05p37_317405_c1 3300050507 Bacteria 1845
298 nmdc:mga08y16_104201_c1 3300050511 Bacteria 2953
299 nmdc:mga08y16_35272_c1 3300050511 Bacteria 5253
300 nmdc:mga08y16_354274_c1 3300050511 Bacteria 1507
301 nmdc:mga08y16_37929_c1 3300050511 Bacteria 5059
302 nmdc:mga0n895_176024_c1 3300050512 Unclassified 2170
303 nmdc:mga0n895_259901_c1 3300050512 Bacteria 1762
304 nmdc:mga08x19_12340_c1 3300050514 Bacteria 5146
305 nmdc:mga08x19_91735_c1 3300050514 Bacteria 2005
306 nmdc:mga0a205_35615_c1 3300050515 Bacteria 4779
307 nmdc:mga0a205_428774_c1 3300050515 Unclassified 1184
308 nmdc:mga0a205_526796_c1 3300050515 Bacteria 1038
309 Ga0500658_0053601 3300053134 Bacteria 1655
310 Ga0590071_001832 3300059421 Bacteria 5487
311 Ga0590075_007638 3300059424 Bacteria 2575
312 Ga0590077_000193 3300059426 Bacteria 17507
313 Ga0065712_10076069
314 Ga0065712_10027552
315 Ga0065707_10099072
316 Ga0070658_10055236
317 Ga0070658_10617841
318 Ga0070676_10009399
319 Ga0070683_100528803
320 Ga0070690_100006852
321 Ga0070670_100009712
322 Ga0070677_10156610
323 Ga0068869_100205775
324 Ga0070666_10148295
325 Ga0070680_100017349
326 Ga0070680_100215855
327 Ga0070660_100004199
328 Ga0070660_100132969
329 Ga0070660_100341124
330 Ga0070689_100207970
331 Ga0070687_100336574
332 Ga0070669_100022908
333 Ga0070669_100124128
334 Ga0070675_100025530
335 Ga0070675_100076018
336 Ga0070674_100014928
337 Ga0070674_100026775
338 Ga0070688_100581480
339 Ga0070659_100092762
340 Ga0070659_100106171
341 Ga0070659_100748925
342 Ga0070703_10000565
343 Ga0070703_10132006
344 Ga0070709_10146739
345 Ga0070713_100214515
346 Ga0070701_10007635
347 Ga0070701_10010857
348 Ga0070701_10034918
349 Ga0070705_100032749
350 Ga0070705_100127926
351 Ga0070700_100003709
352 Ga0070694_100008609
353 Ga0070694_100037533
354 Ga0070694_100054447
355 Ga0070694_100082865
356 Ga0070708_100067586
357 Ga0070708_100188241
358 Ga0070708_100645313
359 Ga0070678_100517828
360 Ga0070681_10037179
361 Ga0070681_10124911
362 Ga0070681_10217270
363 Ga0068867_100008841
364 Ga0068867_100318710
365 Ga0070685_10447937
366 Ga0070706_100001578
367 Ga0070706_100003496
368 Ga0070706_100096990
369 Ga0070707_100007743
370 Ga0070707_100016193
371 Ga0070698_100155197
372 Ga0070698_100522112
373 Ga0070698_100650802
374 Ga0070698_100798157
375 Ga0070699_100008392
376 Ga0070699_100011123
377 Ga0070699_100037310
378 Ga0070679_100015103
379 Ga0070679_100046173
380 Ga0070679_100071032
381 Ga0070697_100000565
382 Ga0070697_100200015
383 Ga0070697_100200590
384 Ga0070697_100368915
385 Ga0068853_100273184
386 Ga0068853_100488183
387 Ga0070672_100063558
388 Ga0070695_100000591
389 Ga0070695_100004853
390 Ga0070695_100012739
391 Ga0070695_100015934
392 Ga0070696_100008370
393 Ga0070696_100018948
394 Ga0070696_100098648
395 Ga0070696_100123532
396 Ga0070693_100000060
397 Ga0070665_100033112
398 Ga0070704_100001221
399 Ga0070704_100013152
400 Ga0070704_100108590
401 Ga0070704_100609997
402 Ga0068855_100014456
403 Ga0068855_100070023
404 Ga0070664_100016119
405 Ga0068854_100427792
406 Ga0068856_100184139
407 Ga0068859_100002791
408 Ga0068859_100030729
409 Ga0068859_100068417
410 Ga0068864_100007414
411 Ga0068864_100015639
412 Ga0068864_100295206
413 Ga0068864_100301980
414 Ga0068861_100026471
415 Ga0068861_100038595
416 Ga0068863_100062757
417 Ga0068858_100020731
418 Ga0068858_100096378
419 Ga0068858_100110661
420 Ga0068862_100110387
421 Ga0070715_10388869
422 Ga0070716_100003519
423 Ga0070712_100461949
424 Ga0097621_100005403
425 Ga0068871_100027136
426 Ga0075433_10375181
427 Ga0075433_10653412
428 Ga0075434_100162817
429 Ga0075434_100251200
430 Ga0068865_100004885
431 Ga0068865_100010832
432 Ga0075436_100015259
433 Ga0097620_100002791
434 Ga0097620_100030728
435 Ga0097620_100068417
436 Ga0075435_100029492
437 Ga0099794_10005812
438 Ga0105240_10015623
439 Ga0105240_10046460
440 Ga0105240_10142420
441 Ga0111539_10013369
442 Ga0111539_10047903
443 Ga0111539_10051347
444 Ga0105245_10048878
445 Ga0105245_10202286
446 Ga0105245_10429813
447 Ga0114129_10040104
448 Ga0105243_10058990
449 Ga0105242_10001551
450 Ga0105242_10015148
451 Ga0105242_10073595
452 Ga0105248_10023938
453 Ga0105248_10094398
454 Ga0105248_10297111
455 Ga0105248_10607921
456 Ga0105238_10058585
457 Ga0105238_10071761
458 Ga0105238_10343703
459 Ga0105249_10130089
460 Ga0105249_10744307
461 Ga0157374_10001975
462 Ga0157374_10009617
463 Ga0157378_10003083
464 Ga0163163_10013449
465 Ga0163163_10015647
466 Ga0163163_10556621
467 Ga0157380_10096454
468 Ga0157380_10261796
469 Ga0157380_10467335
470 Ga0157379_10379395
471 Ga0157379_10813680
472 Ga0157376_10029644
473 Ga0157376_10053502
474 Ga0224572_1009417
475 Ga0207653_10001331
476 Ga0207642_10011391
477 Ga0207688_10212653
478 Ga0207680_10202302
479 Ga0207645_10023799
480 Ga0207645_10029880
481 Ga0207705_10118284
482 Ga0207684_10006412
483 Ga0207684_10035979
484 Ga0207684_10040942
485 Ga0207695_10052250
486 Ga0207695_10054727
487 Ga0207695_10108547
488 Ga0207693_10306046
489 Ga0207663_10224901
490 Ga0207662_10176280
491 Ga0207657_10005608
492 Ga0207657_10010438
493 Ga0207652_10033053
494 Ga0207652_10067888
495 Ga0207652_10090686
496 Ga0207646_10000005
497 Ga0207646_10068512
498 Ga0207646_10106897
499 Ga0207646_10325085
500 Ga0207650_10051692
501 Ga0207659_10002572
502 Ga0207659_10034326
503 Ga0207687_10170502
504 Ga0207664_10151384
505 Ga0207690_10170694
506 Ga0207669_10050258
507 Ga0207669_10721221
508 Ga0207704_10006024
509 Ga0207704_10038387
510 Ga0207704_10076218
511 Ga0207665_10001146
512 Ga0207711_10147299
513 Ga0207711_10202286
514 Ga0207711_10578006
515 Ga0207711_10882472
516 Ga0207679_10028919
517 Ga0207667_10193187
518 Ga0207651_10074683
519 Ga0207651_10130294
520 Ga0207640_10307144
521 Ga0207658_10205058
522 Ga0207703_10013280
523 Ga0207703_10063119
524 Ga0207639_10087774
525 Ga0207639_10833368
526 Ga0207708_10004152
527 Ga0207708_10020397
528 Ga0207702_10253851
529 Ga0207648_10001404
530 Ga0207648_10004290
531 Ga0207648_10224346
532 Ga0207648_10482038
533 Ga0207676_10009812
534 Ga0207676_10059124
535 Ga0207675_100026961
536 Ga0207675_100030537
537 Ga0207675_100417184
538 Ga0207683_10064967
539 Ga0207683_10331307
540 Ga0207428_10048786
541 Ga0207428_10328212
542 Ga0268266_10247667
543 Ga0268264_10098011
544 Ga0265336_10089015
545 Ga0265760_10003190
546 Ga0265332_10050971
547 Ga0307408_100038041
548 Ga0265314_10026153
549 Ga0307410_10281250
550 Ga0307416_100512167
551 Ga0373944_0063071
552 Ga0373936_0092272
553 Ga0373943_0090452
554 Ga0373943_0129759
555 Ga0373946_0032292
556 Ga0373924_0065156
557 Ga0373947_0170721
558 Ga0265778_020557
559 Ga0265778_022832
560 Ga0451577_0000290
561 Ga0451577_0006815
562 Ga0453683_0014547
563 Ga0453684_0000104
564 Ga0453684_0284577
565 Ga0451576_0006148
566 Ga0495592_0081967
567 Ga0495651_0001481
568 Ga0495653_0040830
569 Ga0495580_0236793
570 Ga0495608_0025147
571 Ga0495618_0052354
572 Ga0495628_0000167
573 Ga0495630_0029222
574 Ga0495666_0171959
575 Ga0495652_0005534
576 Ga0495652_0345805
577 Ga0495665_0098915
578 Ga0495640_0077963
579 Ga0495640_0080046
580 Ga0495640_0463440
581 Ga0495587_0017906
582 Ga0495645_0001627
583 Ga0495645_0092330
584 Ga0495667_0017725
585 Ga0495634_0051400
586 Ga0495635_0061034
587 Ga0495657_0005766
588 Ga0495599_0000850
589 Ga0495623_0235695
590 Ga0495647_0124342
591 Ga0495669_0001462
592 Ga0495613_0041973
593 Ga0495600_0171722
594 Ga0495604_0000934
595 Ga0495674_0006106
596 Ga0495680_0003912
597 Ga0495675_0000289
598 Ga0495675_0314686
599 Ga0495602_0004170
600 Ga0495602_0106311
601 Ga0496108_0005385
602 Ga0496110_0494506
603 Ga0496112_0002883
604 Ga0496112_0818467
605 Ga0496114_0629429
606 Ga0496115_0055084
607 nmdc:mga05p37_102216_c1
608 nmdc:mga05p37_243483_c1
609 nmdc:mga05p37_317405_c1
610 nmdc:mga08y16_104201_c1
611 nmdc:mga08y16_35272_c1
612 nmdc:mga08y16_354274_c1
613 nmdc:mga08y16_37929_c1
614 nmdc:mga0n895_176024_c1
615 nmdc:mga0n895_259901_c1
616 nmdc:mga08x19_12340_c1
617 nmdc:mga08x19_91735_c1
618 nmdc:mga0a205_35615_c1
619 nmdc:mga0a205_428774_c1
620 nmdc:mga0a205_526796_c1
621 Ga0500658_0053601
622 Ga0590071_001832
623 Ga0590075_007638
624 Ga0590077_000193

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04366

Ysc84

Las17-binding protein actin regulator

139

263

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rfq-assembly1.cif.gz_A structure of bacterial sylf domain containing protein, beta cell expansion factor a (befa) 0.5642 15 186
5uc0-assembly1.cif.gz_A crystal structure of beta-barrel-like, uncharacterized protein of cog5400 from brucella abortus 0.5041 55 183
7rfq-assembly1.cif.gz_A structure of bacterial sylf domain containing protein, beta cell expansion factor a (befa) 0.4492 15 186
7ohs-assembly1.cif.gz_K nog1-tap associated immature ribosomal particle population f from s. cerevisiae 0.4133 25 72
6vna-assembly1.cif.gz_A pden_1323 0.3662 47 118
ID Description Score Start End Superfamily
af_X1WD58_292_415_2.40.50.120 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P); 0.3759 44 118 2.40.50.120
af_P34710_473_604_2.40.50.120 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P); 0.3565 38 121 2.40.50.120
af_O42140_467_601_2.40.50.120 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P); 0.2951 40 121 2.40.50.120
af_O45799_51_280_2.40.160.200 Mainly Beta;Beta Barrel;Porin;LURP1-related 0.28 40 120 2.40.160.200
af_Q9VBS8_158_336_3.90.1200.10 Alpha Beta;Alpha-Beta Complex;Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2;Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.2673 162 222 3.90.1200.10
ID Description Score Start End GO Terms
AF-Q1INT5-F1-model_v4 Ysc84 actin-binding domain-containing protein 0.8449 17 226 GO:0035091
AF-A0A2P6WHK9-F1-model_v4 Ysc84 actin-binding domain-containing protein 0.8387 16 226 GO:0035091
AF-A0A2V9BQ86-F1-model_v4 Ysc84 actin-binding domain-containing protein 0.8386 17 226 GO:0035091
AF-A0A177E668-F1-model_v4 Ysc84 actin-binding domain-containing protein 0.8327 24 223 GO:0035091
AF-A0A1F2RBR5-F1-model_v4 Ysc84 actin-binding domain-containing protein 0.8303 21 230 GO:0035091

Map