F401473

General Info

Members Datasets Scaffolds Average Seq Length
311 222 218 485

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2739367654|2739604751
Length 517
Sequence QNVAAGFAVVLEPTNLLYCLVGVVIGMLIGVLPGLGPAATIAILLPLTYGVEPVTAIIMLAGIFYGAQYGGTITSVLLRLPGEASSVVTVLDGHALARKGKAGTALGVAAVGSFIGGTVAIVGLTFLAPVVAGFALDFGPPEYAALALLGILLVSTIASGAKVKALIAAAIGLLLATVGRDAFTGAERFTFDSLSLADGIDFVPVAMGLFGLGEILYNLEERHRAVHAPGKVANVWPSRKDLKESSGAVTRGSVLGFFLGILPGGGATIASMAAYAAEKKRAKDPSRFGKGAIEGVAGPETANNAAATSSFIPLLTLGIPANATMALMFGALLIQGITPGPQLVSEHPELFWGVVNSMYIGNVLLLIMSIPLVGVFVRILRVRAAILAPVTALITMIGAYTINNSVFDVLLVVVFGAVGYLMKKFGFEPGPLVLAFVLGSLLESSLRRSLLMFDGSAAGFFTRPISATLLVVFVVVAALPLIRAVRERRAAVPAGVAAAADGSSDGASAKNREEESV

Samples

Sample ID Description Type Environment
1 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
2 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
3 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
4 2516143018 Ensifer sp. BR816 Isolate Nodule
5 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
6 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
7 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
8 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
9 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
10 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
11 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
12 2643221569 Achromobacter sp. Root565 Isolate Unclassified
13 2643221594 Achromobacter sp. Root170 Isolate Unclassified
14 2643221621 Achromobacter sp. Root83 Isolate Unclassified
15 2643221733 Bosea sp. Root381 Isolate Unclassified
16 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
17 2671180694 Paenibacillus sp. A3 Isolate Unclassified
18 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
19 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
20 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
21 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
22 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
23 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
24 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
25 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
26 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
27 2773857925 Microvirga vignae BR3299 Isolate Unclassified
28 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
29 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
30 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
31 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
32 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
33 2808606372 Agromyces sp. 23-23 Isolate Unclassified
34 2808606394 Promicromonospora sp. C35 Isolate Unclassified
35 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
36 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
37 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
38 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
39 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
40 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
41 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
42 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
43 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
44 2855730933 Achromobacter sp. HZ28 Isolate Nodule
45 2855767633 Achromobacter sp. HZ34 Isolate Nodule
46 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
47 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
48 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
49 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
50 2858868258 Micromonospora sp. MH33 Isolate Unclassified
51 2858950400 Achromobacter sp. K91 Isolate Unclassified
52 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
53 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
54 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
55 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
56 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
57 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
58 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
59 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
60 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
61 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
62 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
63 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
64 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
65 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
66 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
67 2941479691
68 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
69 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
70 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
71 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
72 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
73 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
74 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
75 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
76 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
77 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
78 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
79 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
80 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
81 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
82 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
83 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
84 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
85 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
86 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
87 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
88 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
89 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
90 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
91 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
92 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
93 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
94 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
95 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
96 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
97 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
98 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
99 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
100 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
101 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
102 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
103 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
104 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
105 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
106 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
107 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
108 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
109 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
110 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
111 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
112 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
113 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
114 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
115 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
116 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
117 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
118 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
122 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
125 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
141 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
142 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
143 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
144 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
145 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
146 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
147 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
148 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
149 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
150 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
151 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
152 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
153 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
154 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
155 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
156 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
157 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
158 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
159 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
160 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
161 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
162 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
163 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
164 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
165 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
166 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
167 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
168 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
169 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
170 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
171 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
172 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
173 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
174 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
175 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
176 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
177 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
178 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
179 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
180 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
181 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
182 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
183 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
184 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
185 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
186 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
187 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
188 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
189 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
190 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
191 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
192 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
193 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
194 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
195 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
196 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
197 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
198 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
199 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
201 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
203 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
204 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
205 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
206 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
207 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
208 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
209 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
210 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
211 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
212 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
213 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
214 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
215 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
216 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
217 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
218 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
219 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
220 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
221 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified
222 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 70.1
Metatranscriptomes 0
Isolates 29.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.72
Nodule 5.79
Rhizoplane 11.25
Rhizosphere 50.16
Stem 0
Stem Tuber 0
Unclassified 25.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1000340 3300000549 Bacteria 8077
2 JGI25156J39149_1002427 3300002705 Bacteria 6690
3 JGI25154J39366_1001040 3300002738 Bacteria 11091
4 JGI25406J46586_10002873 3300003203 Bacteria 8117
5 Ga0055542_1001697 3300003762 Bacteria 9602
6 Ga0055536_1001109 3300003781 Bacteria 16921
7 Ga0055541_1001569 3300003841 Bacteria 4905
8 Ga0058692_1013197 3300003856 Bacteria 1933
9 Ga0065714_10067671 3300005288 Bacteria 5297
10 Ga0065712_10104311 3300005290 Bacteria 1964
11 Ga0070676_10074869 3300005328 Bacteria 2040
12 Ga0070670_100000725 3300005331 Bacteria 25600
13 Ga0070668_100023540 3300005347 Bacteria 4659
14 Ga0070668_100074670 3300005347 Bacteria 2646
15 Ga0070669_100027605 3300005353 Bacteria 4086
16 Ga0070675_100002711 3300005354 Bacteria 13312
17 Ga0070671_100021298 3300005355 Bacteria 5296
18 Ga0070711_100098771 3300005439 Bacteria 2120
19 Ga0070708_100136752 3300005445 Bacteria 2270
20 Ga0070678_100007660 3300005456 Bacteria 6419
21 Ga0070672_100043545 3300005543 Bacteria 3462
22 Ga0081455_10003823 3300005937 Bacteria 17186
23 Ga0081538_10001432 3300005981 Bacteria 24526
24 Ga0081538_10001972 3300005981 Bacteria 20525
25 Ga0081539_10000944 3300005985 Bacteria 54445
26 Ga0075365_10026335 3300006038 Bacteria 3691
27 Ga0075365_10051191 3300006038 Bacteria 2727
28 Ga0075364_10000017 3300006051 Bacteria 57005
29 Ga0075364_10006600 3300006051 Bacteria 6832
30 Ga0075364_10026196 3300006051 Bacteria 3718
31 Ga0075364_10038308 3300006051 Bacteria 3106
32 Ga0075432_10001861 3300006058 Bacteria 6970
33 Ga0070712_100020930 3300006175 Bacteria 4287
34 Ga0070712_100041811 3300006175 Bacteria 3149
35 Ga0075428_100024727 3300006844 Bacteria 6646
36 Ga0075434_100170609 3300006871 Bacteria 2195
37 Ga0079104_1000029 3300006946 Bacteria 207648
38 Ga0105244_10023786 3300009036 Bacteria 3354
39 Ga0105247_10036959 3300009101 Bacteria 2978
40 Ga0114129_10008524 3300009147 Bacteria 14611
41 Ga0105243_10080666 3300009148 Bacteria 2654
42 Ga0105246_10004702 3300011119 Bacteria 8312
43 Ga0105246_10158734 3300011119 Bacteria 1721
44 Ga0157371_10035398 3300013102 Bacteria 3577
45 Ga0157369_10138033 3300013105 Bacteria 2580
46 Ga0157378_10240621 3300013297 Bacteria 1729
47 Ga0163162_10214238 3300013306 Bacteria 2056
48 Ga0157372_10164850 3300013307 Bacteria 2562
49 Ga0157379_10216060 3300014968 Bacteria 1737
50 Ga0163161_10066886 3300017792 Bacteria 2624
51 Ga0209784_100687 3300025224 Bacteria 9415
52 Ga0209566_100519 3300025225 Bacteria 26446
53 Ga0209674_100456 3300025226 Bacteria 18609
54 Ga0209646_1000022 3300025246 Bacteria 446621
55 Ga0209677_106401 3300025253 Bacteria 2789
56 Ga0209148_1000158 3300025254 Bacteria 140830
57 Ga0209759_1003453 3300025256 Bacteria 6282
58 Ga0209050_1003679 3300025298 Bacteria 11057
59 Ga0207697_10017098 3300025315 Bacteria 2981
60 Ga0207642_10040287 3300025899 Bacteria 2037
61 Ga0207647_10007267 3300025904 Bacteria 8018
62 Ga0207645_10055136 3300025907 Bacteria 2538
63 Ga0207643_10040981 3300025908 Bacteria 2609
64 Ga0207693_10003847 3300025915 Bacteria 12785
65 Ga0207693_10030007 3300025915 Bacteria 4292
66 Ga0207650_10016318 3300025925 Bacteria 5190
67 Ga0207706_10049810 3300025933 Bacteria 3701
68 Ga0207691_10000865 3300025940 Bacteria 30095
69 Ga0207679_10146146 3300025945 Bacteria 1918
70 Ga0207668_10022538 3300025972 Bacteria 4034
71 Ga0207678_10013871 3300026067 Bacteria 7079
72 Ga0207674_10074071 3300026116 Bacteria 3417
73 Ga0207683_10021771 3300026121 Bacteria 5496
74 Ga0209281_1000118 3300027111 Bacteria 208448
75 Ga0207428_10020419 3300027907 Bacteria 5629
76 Ga0307515_10017033 3300028794 Bacteria 13273
77 Ga0307515_10054020 3300028794 Bacteria 5908
78 Ga0307515_10196209 3300028794 Bacteria 1910
79 Ga0307408_100009285 3300031548 Bacteria 6483
80 Ga0307408_100009510 3300031548 Bacteria 6413
81 Ga0307408_100011255 3300031548 Bacteria 5908
82 Ga0307408_100016448 3300031548 Bacteria 4938
83 Ga0307408_100042948 3300031548 Bacteria 3214
84 Ga0307408_100125881 3300031548 Bacteria 1992
85 Ga0307405_10004721 3300031731 Bacteria 6486
86 Ga0307405_10043268 3300031731 Bacteria 2746
87 Ga0307413_10024648 3300031824 Bacteria 3283
88 Ga0307413_10036441 3300031824 Bacteria 2831
89 Ga0307413_10049829 3300031824 Bacteria 2512
90 Ga0307413_10136989 3300031824 Bacteria 1685
91 Ga0307410_10009846 3300031852 Bacteria 5384
92 Ga0307410_10016415 3300031852 Bacteria 4417
93 Ga0307410_10036944 3300031852 Bacteria 3186
94 Ga0307410_10039459 3300031852 Bacteria 3100
95 Ga0307410_10052430 3300031852 Bacteria 2755
96 Ga0307410_10064639 3300031852 Bacteria 2514
97 Ga0307410_10138509 3300031852 Bacteria 1797
98 Ga0307406_10009685 3300031901 Bacteria 5417
99 Ga0307407_10000968 3300031903 Bacteria 9793
100 Ga0307407_10100617 3300031903 Bacteria 1793
101 Ga0307412_10003030 3300031911 Bacteria 9302
102 Ga0307412_10006920 3300031911 Bacteria 6433
103 Ga0307412_10010900 3300031911 Bacteria 5248
104 Ga0307412_10017962 3300031911 Bacteria 4243
105 Ga0307412_10059153 3300031911 Bacteria 2567
106 Ga0307412_10165758 3300031911 Bacteria 1647
107 Ga0307409_100015351 3300031995 Bacteria 5024
108 Ga0307409_100071614 3300031995 Bacteria 2757
109 Ga0307409_100075477 3300031995 Bacteria 2699
110 Ga0307409_100078393 3300031995 Bacteria 2658
111 Ga0307416_100009014 3300032002 Bacteria 6492
112 Ga0307416_100017212 3300032002 Bacteria 5049
113 Ga0307416_100033186 3300032002 Bacteria 3910
114 Ga0307416_100034584 3300032002 Bacteria 3847
115 Ga0307416_100054949 3300032002 Bacteria 3203
116 Ga0307416_100077450 3300032002 Bacteria 2793
117 Ga0307416_100156620 3300032002 Bacteria 2098
118 Ga0307414_10015024 3300032004 Bacteria 4664
119 Ga0307414_10020873 3300032004 Bacteria 4092
120 Ga0307414_10096129 3300032004 Bacteria 2216
121 Ga0307415_100010349 3300032126 Bacteria 5279
122 Ga0307415_100034975 3300032126 Bacteria 3277
123 Ga0307415_100077962 3300032126 Bacteria 2355
124 Ga0307415_100174151 3300032126 Bacteria 1681
125 Ga0307415_100191227 3300032126 Bacteria 1615
126 Ga0373946_0032688 3300035171 Bacteria 2091
127 Ga0373927_0064668 3300035695 Bacteria 2366
128 Ga0395900_0174464 3300037418 Bacteria 2187
129 Ga0395898_0021657 3300037466 Bacteria 6515
130 Ga0395905_0310673 3300037471 Bacteria 1465
131 Ga0439436_0000771 3300041404 Bacteria 8670
132 Ga0439436_0015212 3300041404 Bacteria 2315
133 Ga0439465_0011354 3300041413 Bacteria 2795
134 Ga0451797_0567160 3300041453 Bacteria 1914
135 Ga0439433_0005661 3300041999 Bacteria 2682
136 Ga0439433_0016161 3300041999 Bacteria 1651
137 Ga0439449_0000543 3300042007 Bacteria 14119
138 Ga0439449_0005620 3300042007 Bacteria 4795
139 Ga0439434_0007974 3300042435 Bacteria 3104
140 Ga0453684_0107847 3300044712 Bacteria 3390
141 Ga0495641_0058842 3300046461 Bacteria 1738
142 Ga0495642_0013325 3300046528 Bacteria 3179
143 Ga0495642_0039729 3300046528 Bacteria 1910
144 Ga0495656_0001041 3300046615 Bacteria 8951
145 Ga0495668_0039134 3300046616 Bacteria 2648
146 Ga0495588_0002772 3300046674 Bacteria 7529
147 Ga0495670_0001465 3300046691 Bacteria 11528
148 Ga0495581_0020072 3300047315 Bacteria 3879
149 Ga0495636_0001437 3300047318 Bacteria 9007
150 Ga0495593_0033212 3300047673 Bacteria 2811
151 Ga0496101_0137038 3300048904 Bacteria 1863
152 Ga0496102_0008427 3300048905 Bacteria 8836
153 Ga0496102_0032006 3300048905 Bacteria 4723
154 Ga0496103_0005242 3300048906 Bacteria 7786
155 Ga0496103_0008252 3300048906 Bacteria 6184
156 Ga0496103_0011009 3300048906 Bacteria 5353
157 Ga0496104_0001808 3300048907 Bacteria 18537
158 Ga0496104_0002463 3300048907 Bacteria 15951
159 Ga0496104_0011280 3300048907 Bacteria 8000
160 Ga0496104_0011322 3300048907 Bacteria 7986
161 Ga0496104_0118923 3300048907 Bacteria 2537
162 Ga0496105_0013402 3300048908 Bacteria 6506
163 Ga0496105_0021323 3300048908 Bacteria 5242
164 Ga0496105_0204191 3300048908 Bacteria 1612
165 Ga0496106_0065944 3300048909 Bacteria 2756
166 Ga0496107_0012187 3300048910 Bacteria 5999
167 Ga0496108_0000521 3300048911 Bacteria 30116
168 Ga0496109_0000193 3300048912 Bacteria 60451
169 Ga0496109_0150291 3300048912 Bacteria 2180
170 Ga0496110_0007650 3300048913 Bacteria 8646
171 Ga0496110_0022597 3300048913 Bacteria 5342
172 Ga0496110_0193290 3300048913 Bacteria 1848
173 Ga0496111_0012877 3300048914 Bacteria 5675
174 Ga0496111_0089729 3300048914 Bacteria 2251
175 Ga0496112_0112016 3300048915 Bacteria 2698
176 Ga0496113_0000245 3300048916 Bacteria 25607
177 Ga0496114_0060679 3300048917 Bacteria 3161
178 Ga0496115_0006599 3300048918 Bacteria 8505
179 Ga0496117_0040634 3300048920 Bacteria 3417
180 Ga0496118_0033889 3300048921 Bacteria 4179
181 Ga0496119_0026955 3300048922 Bacteria 3967
182 Ga0496119_0065587 3300048922 Bacteria 2150
183 Ga0496120_0005138 3300048923 Bacteria 10575
184 Ga0496121_0000174 3300048924 Bacteria 143186
185 Ga0496122_0003228 3300048925 Bacteria 21667
186 Ga0496122_0026210 3300048925 Bacteria 5034
187 Ga0496123_0001818 3300048926 Bacteria 28065
188 Ga0496123_0011485 3300048926 Bacteria 7671
189 Ga0496123_0056728 3300048926 Bacteria 2556
190 Ga0496124_0000013 3300048927 Bacteria 484884
191 Ga0496124_0047178 3300048927 Bacteria 3686
192 Ga0496125_0000093 3300048928 Bacteria 210896
193 Ga0496125_0021837 3300048928 Bacteria 5956
194 Ga0496125_0038730 3300048928 Bacteria 4118
195 Ga0501032_0007933 3300049569 Bacteria 7731
196 Ga0501033_0026025 3300049570 Bacteria 4403
197 Ga0501038_0017889 3300049574 Bacteria 6404
198 Ga0501039_0163980 3300049575 Bacteria 1747
199 Ga0501043_0042306 3300049579 Bacteria 3580
200 Ga0501043_0140127 3300049579 Bacteria 1894
201 Ga0501070_0030040 3300049586 Bacteria 4554
202 Ga0501071_0057743 3300049587 Bacteria 2805
203 Ga0501072_0001346 3300049588 Bacteria 18408
204 Ga0501072_0055963 3300049588 Bacteria 3109
205 Ga0501073_0013617 3300049589 Bacteria 5916
206 Ga0501044_0074270 3300049823 Bacteria 3455
207 nmdc:mga00v17_10911_c1 3300050491 Bacteria 4978
208 nmdc:mga00v17_290_c1 3300050491 Bacteria 29332
209 nmdc:mga00v17_522_c1 3300050491 Bacteria 21549
210 nmdc:mga00v17_7133_c1 3300050491 Bacteria 5954
211 nmdc:mga0yw44_2154_c1 3300050492 Bacteria 8264
212 nmdc:mga0yw44_65364_c1 3300050492 Bacteria 2241
213 nmdc:mga05p37_7504_c2 3300050507 Bacteria 5937
214 Ga0495655_0009359 3300053083 Bacteria 1897
215 Ga0500616_0019891 3300053153 Bacteria 3777
216 Ga0500636_0000267 3300053177 Bacteria 28795
217 Ga0500636_0000882 3300053177 Bacteria 16069
218 Ga0590077_007596 3300059426 Bacteria 2216

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048913 Ga0496110_0193290 Ga0496110_0193290_170_1432 377
2 3300049579 Ga0501043_0140127 Ga0501043_0140127_16_1278 377
3 3300037471 Ga0395905_0310673 Ga0395905_0310673_13_1308 388
4 iso_pu_bacteria 2510461069 2510843848 396
5 3300005981 Ga0081538_10001972 Ga0081538_100019725 397
6 3300028794 Ga0307515_10017033 Ga0307515_1001703310 400
7 3300048920 Ga0496117_0040634 Ga0496117_0040634_47_1360 401
8 3300031852 Ga0307410_10036944 Ga0307410_100369443 402
9 3300032002 Ga0307416_100077450 Ga0307416_1000774502 402
10 3300031852 Ga0307410_10138509 Ga0307410_101385091 404
11 3300031995 Ga0307409_100071614 Ga0307409_1000716143 404
12 3300041453 Ga0451797_0567160 Ga0451797_0567160_391_1866 406
13 3300037418 Ga0395900_0174464 Ga0395900_0174464_156_1634 408
14 3300027907 Ga0207428_10020419 Ga0207428_100204193 410
15 3300046615 Ga0495656_0001041 Ga0495656_0001041_3718_5250 411
16 3300046691 Ga0495670_0001465 Ga0495670_0001465_5767_7299 411
17 3300047318 Ga0495636_0001437 Ga0495636_0001437_650_2182 411
18 3300053083 Ga0495655_0009359 Ga0495655_0009359_450_1886 411
19 3300031548 Ga0307408_100009285 Ga0307408_1000092854 413
20 3300031731 Ga0307405_10004721 Ga0307405_100047214 413
21 3300031852 Ga0307410_10052430 Ga0307410_100524303 413
22 3300031911 Ga0307412_10006920 Ga0307412_100069203 413
23 3300032002 Ga0307416_100009014 Ga0307416_1000090144 413
24 3300032126 Ga0307415_100174151 Ga0307415_1001741511 413
25 3300048906 Ga0496103_0005242 Ga0496103_0005242_3275_4813 414
26 3300048913 Ga0496110_0007650 Ga0496110_0007650_3895_5433 414
27 3300048914 Ga0496111_0012877 Ga0496111_0012877_3538_5076 414
28 3300013105 Ga0157369_10138033 Ga0157369_101380332 415
29 3300013307 Ga0157372_10164850 Ga0157372_101648502 415
30 3300025904 Ga0207647_10007267 Ga0207647_100072672 415
31 3300026116 Ga0207674_10074071 Ga0207674_100740712 415
32 3300050507 nmdc:mga05p37_7504_c2 nmdc:mga05p37_7504_c2_4517_5884 419
33 3300005347 Ga0070668_100023540 Ga0070668_1000235403 421
34 3300025972 Ga0207668_10022538 Ga0207668_100225382 421
35 3300031824 Ga0307413_10136989 Ga0307413_101369892 421
36 3300003203 JGI25406J46586_10002873 JGI25406J46586_100028734 422
37 3300005985 Ga0081539_10000944 Ga0081539_100009446 422
38 3300017792 Ga0163161_10066886 Ga0163161_100668862 422
39 3300031548 Ga0307408_100011255 Ga0307408_1000112552 422
40 3300031852 Ga0307410_10016415 Ga0307410_100164153 422
41 3300031901 Ga0307406_10009685 Ga0307406_100096853 422
42 3300031903 Ga0307407_10100617 Ga0307407_101006172 422
43 3300032002 Ga0307416_100034584 Ga0307416_1000345843 422
44 3300031548 Ga0307408_100016448 Ga0307408_1000164484 423
45 3300031911 Ga0307412_10059153 Ga0307412_100591533 423
46 3300031995 Ga0307409_100015351 Ga0307409_1000153513 423
47 3300032002 Ga0307416_100156620 Ga0307416_1001566201 423
48 3300049574 Ga0501038_0017889 Ga0501038_0017889_3843_5375 423
49 3300003856 Ga0058692_1013197 Ga0058692_10131971 424
50 3300028794 Ga0307515_10054020 Ga0307515_100540202 424
51 3300032126 Ga0307415_100034975 Ga0307415_1000349752 424
52 3300031824 Ga0307413_10049829 Ga0307413_100498292 425
53 3300048907 Ga0496104_0118923 Ga0496104_0118923_22_1440 425
54 3300031911 Ga0307412_10165758 Ga0307412_101657581 426
55 3300049569 Ga0501032_0007933 Ga0501032_0007933_3301_4845 426
56 3300049579 Ga0501043_0042306 Ga0501043_0042306_271_1815 426
57 3300049586 Ga0501070_0030040 Ga0501070_0030040_55_1599 426
58 3300049589 Ga0501073_0013617 Ga0501073_0013617_2120_3664 426
59 3300049823 Ga0501044_0074270 Ga0501044_0074270_487_2031 426
60 3300048925 Ga0496122_0026210 Ga0496122_0026210_1507_3021 428
61 3300048926 Ga0496123_0011485 Ga0496123_0011485_4711_6225 428
62 3300006051 Ga0075364_10006600 Ga0075364_100066002 429
63 3300041404 Ga0439436_0015212 Ga0439436_0015212_756_2255 430
64 3300048925 Ga0496122_0003228 Ga0496122_0003228_10714_12219 431
65 3300048926 Ga0496123_0001818 Ga0496123_0001818_17282_18787 431
66 3300048928 Ga0496125_0021837 Ga0496125_0021837_177_1682 431
67 3300048905 Ga0496102_0008427 Ga0496102_0008427_3064_4545 432
68 3300048906 Ga0496103_0008252 Ga0496103_0008252_4073_5554 432
69 3300049588 Ga0501072_0001346 Ga0501072_0001346_13446_14945 433
70 3300006051 Ga0075364_10000017 Ga0075364_1000001741 435
71 3300006946 Ga0079104_1000029 Ga0079104_1000029183 435
72 3300027111 Ga0209281_1000118 Ga0209281_1000118176 435
73 3300048921 Ga0496118_0033889 Ga0496118_0033889_781_2280 435
74 3300048922 Ga0496119_0026955 Ga0496119_0026955_2242_3741 435
75 3300048923 Ga0496120_0005138 Ga0496120_0005138_8113_9612 435
76 3300048924 Ga0496121_0000174 Ga0496121_0000174_72700_74199 435
77 3300048926 Ga0496123_0056728 Ga0496123_0056728_215_1714 435
78 3300048927 Ga0496124_0047178 Ga0496124_0047178_248_1747 435
79 3300048928 Ga0496125_0000093 Ga0496125_0000093_189236_190735 435
80 3300050491 nmdc:mga00v17_522_c1 nmdc:mga00v17_522_c1_8149_9648 435
81 3300053177 Ga0500636_0000267 Ga0500636_0000267_21731_23230 435
82 3300053177 Ga0500636_0000882 Ga0500636_0000882_3730_5229 435
83 3300059426 Ga0590077_007596 Ga0590077_007596_238_1746 435
84 3300002705 JGI25156J39149_1002427 JGI25156J39149_10024274 438
85 3300002738 JGI25154J39366_1001040 JGI25154J39366_10010404 438
86 3300003762 Ga0055542_1001697 Ga0055542_10016978 438
87 3300031548 Ga0307408_100125881 Ga0307408_1001258812 438
88 3300031995 Ga0307409_100075477 Ga0307409_1000754772 438
89 3300049570 Ga0501033_0026025 Ga0501033_0026025_164_1669 438
90 3300003841 Ga0055541_1001569 Ga0055541_10015694 439
91 3300006051 Ga0075364_10026196 Ga0075364_100261961 439
92 3300032126 Ga0307415_100191227 Ga0307415_1001912271 441
93 3300044712 Ga0453684_0107847 Ga0453684_0107847_1103_2584 441
94 3300050491 nmdc:mga00v17_10911_c1 nmdc:mga00v17_10911_c1_1958_3463 442
95 3300047315 Ga0495581_0020072 Ga0495581_0020072_557_2071 443
96 3300048928 Ga0496125_0038730 Ga0496125_0038730_956_2461 443
97 3300049587 Ga0501071_0057743 Ga0501071_0057743_277_1779 443
98 3300005981 Ga0081538_10001432 Ga0081538_100014324 444
99 3300025224 Ga0209784_100687 Ga0209784_1006875 444
100 3300025225 Ga0209566_100519 Ga0209566_1005192 444
101 3300025226 Ga0209674_100456 Ga0209674_1004565 444
102 3300025246 Ga0209646_1000022 Ga0209646_100002233 444
103 3300025253 Ga0209677_106401 Ga0209677_1064013 444
104 3300025254 Ga0209148_1000158 Ga0209148_1000158110 444
105 3300025256 Ga0209759_1003453 Ga0209759_10034534 444
106 3300048927 Ga0496124_0000013 Ga0496124_0000013_365287_366792 444
107 3300031911 Ga0307412_10003030 Ga0307412_100030307 445
108 3300050491 nmdc:mga00v17_290_c1 nmdc:mga00v17_290_c1_10698_12200 445
109 3300006051 Ga0075364_10038308 Ga0075364_100383081 447
110 3300050491 nmdc:mga00v17_7133_c1 nmdc:mga00v17_7133_c1_336_1838 447
111 3300025907 Ga0207645_10055136 Ga0207645_100551362 448
112 3300032002 Ga0307416_100017212 Ga0307416_1000172125 448
113 3300037466 Ga0395898_0021657 Ga0395898_0021657_4813_6345 448
114 3300046528 Ga0495642_0013325 Ga0495642_0013325_702_2231 448
115 iso_pu_bacteria 2513237144 2513911584 448
116 iso_pu_bacteria 2513237159 2514000022 448
117 iso_pu_bacteria 2516143018 2516207231 448
118 iso_pu_bacteria 2582581294 2585203827 448
119 iso_pu_bacteria 2599185156 2599335268 448
120 iso_pu_bacteria 2599185236 2599719748 448
121 iso_pu_bacteria 2599185292 2599904486 448
122 iso_pu_bacteria 2599185292 2599907195 448
123 iso_pu_bacteria 2600254933 2600375960 448
124 iso_pu_bacteria 2643221569 2643861075 448
125 iso_pu_bacteria 2643221569 2643862481 448
126 iso_pu_bacteria 2643221594 2643980507 448
127 iso_pu_bacteria 2643221594 2643983474 448
128 iso_pu_bacteria 2643221621 2644124376 448
129 iso_pu_bacteria 2643221621 2644124785 448
130 iso_pu_bacteria 2739367655 2739610164 448
131 iso_pu_bacteria 2739367655 2739610246 448
132 iso_pu_bacteria 2739367655 2739611888 448
133 iso_pu_bacteria 2767802442 2770199395 448
134 iso_pu_bacteria 2773857925 2774868815 448
135 iso_pu_bacteria 2791355091 2792623484 448
136 iso_pu_bacteria 2808606395 2809032176 448
137 iso_pu_bacteria 2808606395 2809032613 448
138 iso_pu_bacteria 2821123053 2821126898 448
139 iso_pu_bacteria 2838736955 2838740505 448
140 iso_pu_bacteria 2841840854 2841843371 448
141 iso_pu_bacteria 2842140634 2842143092 448
142 iso_pu_bacteria 2842521101 2842523795 448
143 iso_pu_bacteria 2842922631 2842927109 448
144 iso_pu_bacteria 2855730933 2855733765 448
145 iso_pu_bacteria 2855767633 2855772018 448
146 iso_pu_bacteria 2857531043 2857535318 448
147 iso_pu_bacteria 2857537821 2857538638 448
148 iso_pu_bacteria 2857537821 2857542303 448
149 iso_pu_bacteria 2857542790 2857542801 448
150 iso_pu_bacteria 2857542790 2857543292 448
151 iso_pu_bacteria 2858950400 2858955374 448
152 iso_pu_bacteria 2881412998 2881417607 448
153 iso_pu_bacteria 2881927736 2881931366 448
154 iso_pu_bacteria 2882456835 2882462297 448
155 iso_pu_bacteria 2899792073 2899795568 448
156 iso_pu_bacteria 2899803654 2899805824 448
157 iso_pu_bacteria 2929138655 2929143833 448
158 iso_pu_bacteria 2936367885 2936371110 448
159 iso_pu_bacteria 2941479691 2941485457 448
160 iso_pu_bacteria 2979100975 2979103401 448
161 iso_pu_bacteria 8002392321 8002395344 448
162 iso_pu_bacteria 8005301065 8005306476 448
163 iso_pu_bacteria 8005376324 8005380309 448
164 iso_pu_bacteria 8005688590 8005693827 448
165 iso_pu_bacteria 8048746797 8048748455 448
166 iso_pu_bacteria 8054460903 8054464208 448
167 3300005288 Ga0065714_10067671 Ga0065714_100676712 449
168 3300005290 Ga0065712_10104311 Ga0065712_101043111 449
169 3300005328 Ga0070676_10074869 Ga0070676_100748692 449
170 3300005353 Ga0070669_100027605 Ga0070669_1000276054 449
171 3300005354 Ga0070675_100002711 Ga0070675_1000027118 449
172 3300005355 Ga0070671_100021298 Ga0070671_1000212984 449
173 3300005456 Ga0070678_100007660 Ga0070678_1000076603 449
174 3300005543 Ga0070672_100043545 Ga0070672_1000435452 449
175 3300006058 Ga0075432_10001861 Ga0075432_100018617 449
176 3300009036 Ga0105244_10023786 Ga0105244_100237861 449
177 3300009148 Ga0105243_10080666 Ga0105243_100806662 449
178 3300011119 Ga0105246_10004702 Ga0105246_100047023 449
179 3300013102 Ga0157371_10035398 Ga0157371_100353983 449
180 3300025315 Ga0207697_10017098 Ga0207697_100170982 449
181 3300025940 Ga0207691_10000865 Ga0207691_1000086513 449
182 3300031548 Ga0307408_100042948 Ga0307408_1000429483 449
183 3300031903 Ga0307407_10000968 Ga0307407_100009683 449
184 3300031911 Ga0307412_10017962 Ga0307412_100179623 449
185 3300032002 Ga0307416_100033186 Ga0307416_1000331865 449
186 3300032004 Ga0307414_10020873 Ga0307414_100208736 449
187 3300032004 Ga0307414_10096129 Ga0307414_100961292 449
188 3300041404 Ga0439436_0000771 Ga0439436_0000771_4519_6051 449
189 3300041413 Ga0439465_0011354 Ga0439465_0011354_579_2111 449
190 3300041999 Ga0439433_0005661 Ga0439433_0005661_311_1843 449
191 3300041999 Ga0439433_0016161 Ga0439433_0016161_105_1634 449
192 3300042007 Ga0439449_0000543 Ga0439449_0000543_8166_9698 449
193 3300042435 Ga0439434_0007974 Ga0439434_0007974_1204_2736 449
194 3300046528 Ga0495642_0039729 Ga0495642_0039729_234_1766 449
195 3300046616 Ga0495668_0039134 Ga0495668_0039134_525_2057 449
196 3300046674 Ga0495588_0002772 Ga0495588_0002772_3042_4574 449
197 3300048907 Ga0496104_0011280 Ga0496104_0011280_542_2074 449
198 3300048908 Ga0496105_0204191 Ga0496105_0204191_62_1594 449
199 3300048912 Ga0496109_0150291 Ga0496109_0150291_396_1928 449
200 3300048915 Ga0496112_0112016 Ga0496112_0112016_672_2204 449
201 3300048917 Ga0496114_0060679 Ga0496114_0060679_903_2435 449
202 3300048922 Ga0496119_0065587 Ga0496119_0065587_477_2009 449
203 iso_pu_bacteria 2857465823 2857469558 449
204 3300025298 Ga0209050_1003679 Ga0209050_10036798 450
205 3300031824 Ga0307413_10024648 Ga0307413_100246482 450
206 3300031852 Ga0307410_10009846 Ga0307410_100098463 450
207 3300031852 Ga0307410_10039459 Ga0307410_100394592 450
208 3300031911 Ga0307412_10010900 Ga0307412_100109004 450
209 3300031995 Ga0307409_100078393 Ga0307409_1000783932 450
210 3300042007 Ga0439449_0005620 Ga0439449_0005620_1579_3111 450
211 iso_pu_bacteria 2671180694 2673822464 450
212 iso_pu_bacteria 2857465823 2857470417 450
213 iso_pu_bacteria 2898907183 2898907965 450
214 iso_pu_bacteria 2980125574 2980127410 450
215 iso_pu_bacteria 643692032 643826837 450
216 3300005331 Ga0070670_100000725 Ga0070670_1000007259 451
217 3300005347 Ga0070668_100074670 Ga0070668_1000746701 451
218 3300005445 Ga0070708_100136752 Ga0070708_1001367521 451
219 3300005937 Ga0081455_10003823 Ga0081455_100038239 451
220 3300006038 Ga0075365_10026335 Ga0075365_100263352 451
221 3300006038 Ga0075365_10051191 Ga0075365_100511912 451
222 3300006175 Ga0070712_100041811 Ga0070712_1000418113 451
223 3300006844 Ga0075428_100024727 Ga0075428_1000247275 451
224 3300006871 Ga0075434_100170609 Ga0075434_1001706093 451
225 3300009101 Ga0105247_10036959 Ga0105247_100369593 451
226 3300009147 Ga0114129_10008524 Ga0114129_1000852411 451
227 3300011119 Ga0105246_10158734 Ga0105246_101587341 451
228 3300013297 Ga0157378_10240621 Ga0157378_102406212 451
229 3300013306 Ga0163162_10214238 Ga0163162_102142383 451
230 3300014968 Ga0157379_10216060 Ga0157379_102160601 451
231 3300025899 Ga0207642_10040287 Ga0207642_100402872 451
232 3300025908 Ga0207643_10040981 Ga0207643_100409813 451
233 3300025915 Ga0207693_10003847 Ga0207693_100038479 451
234 3300025925 Ga0207650_10016318 Ga0207650_100163183 451
235 3300025933 Ga0207706_10049810 Ga0207706_100498104 451
236 3300025945 Ga0207679_10146146 Ga0207679_101461462 451
237 3300026067 Ga0207678_10013871 Ga0207678_100138711 451
238 3300026121 Ga0207683_10021771 Ga0207683_100217715 451
239 3300032126 Ga0307415_100077962 Ga0307415_1000779622 451
240 3300035171 Ga0373946_0032688 Ga0373946_0032688_232_1734 451
241 3300035695 Ga0373927_0064668 Ga0373927_0064668_639_2141 451
242 3300046461 Ga0495641_0058842 Ga0495641_0058842_208_1710 451
243 3300047673 Ga0495593_0033212 Ga0495593_0033212_100_1602 451
244 3300048904 Ga0496101_0137038 Ga0496101_0137038_17_1519 451
245 3300048905 Ga0496102_0032006 Ga0496102_0032006_1954_3456 451
246 3300048906 Ga0496103_0011009 Ga0496103_0011009_667_2169 451
247 3300048907 Ga0496104_0002463 Ga0496104_0002463_11624_13126 451
248 3300048907 Ga0496104_0011322 Ga0496104_0011322_1390_2892 451
249 3300048908 Ga0496105_0013402 Ga0496105_0013402_4356_5858 451
250 3300048908 Ga0496105_0021323 Ga0496105_0021323_3155_4657 451
251 3300048909 Ga0496106_0065944 Ga0496106_0065944_110_1612 451
252 3300048910 Ga0496107_0012187 Ga0496107_0012187_3931_5433 451
253 3300048911 Ga0496108_0000521 Ga0496108_0000521_17478_18980 451
254 3300048912 Ga0496109_0000193 Ga0496109_0000193_44167_45669 451
255 3300048913 Ga0496110_0022597 Ga0496110_0022597_2826_4328 451
256 3300048914 Ga0496111_0089729 Ga0496111_0089729_97_1599 451
257 3300048916 Ga0496113_0000245 Ga0496113_0000245_12354_13856 451
258 3300048918 Ga0496115_0006599 Ga0496115_0006599_2618_4120 451
259 3300049575 Ga0501039_0163980 Ga0501039_0163980_67_1569 451
260 3300049588 Ga0501072_0055963 Ga0501072_0055963_1321_2823 451
261 3300050492 nmdc:mga0yw44_2154_c1 nmdc:mga0yw44_2154_c1_3384_4886 451
262 3300050492 nmdc:mga0yw44_65364_c1 nmdc:mga0yw44_65364_c1_676_2178 451
263 iso_pu_bacteria 2858868258 2858875382 451
264 3300003781 Ga0055536_1001109 Ga0055536_100110914 452
265 3300028794 Ga0307515_10196209 Ga0307515_101962092 452
266 iso_pu_bacteria 2537561592 2537900970 452
267 iso_pu_bacteria 2554235227 2555230890 452
268 iso_pu_bacteria 2643221733 2644729942 452
269 iso_pu_bacteria 2758568621 2760623190 452
270 iso_pu_bacteria 2867312974 2867317565 452
271 iso_pu_bacteria 2867319477 2867325631 452
272 iso_pu_bacteria 2919391150 2919392514 452
273 iso_pu_bacteria 2939598168 2939601669 452
274 iso_pu_bacteria 2945941187 2945945194 452
275 iso_pu_bacteria 2945956166 2945956436 452
276 3300005439 Ga0070711_100098771 Ga0070711_1000987711 453
277 3300006175 Ga0070712_100020930 Ga0070712_1000209302 453
278 3300025915 Ga0207693_10030007 Ga0207693_100300072 453
279 3300031548 Ga0307408_100009510 Ga0307408_1000095106 453
280 3300031731 Ga0307405_10043268 Ga0307405_100432683 453
281 3300031824 Ga0307413_10036441 Ga0307413_100364413 453
282 3300031852 Ga0307410_10064639 Ga0307410_100646392 453
283 3300032002 Ga0307416_100054949 Ga0307416_1000549492 453
284 3300032004 Ga0307414_10015024 Ga0307414_100150246 453
285 3300032126 Ga0307415_100010349 Ga0307415_1000103495 453
286 3300048907 Ga0496104_0001808 Ga0496104_0001808_11919_13421 453
287 iso_pu_bacteria 2808606372 2808900083 453
288 iso_pu_bacteria 2895427314 2895429817 453
289 3300053153 Ga0500616_0019891 Ga0500616_0019891_132_1637 454
290 iso_pu_bacteria 2675903059 2676482262 454
291 iso_pu_bacteria 2758568522 2760308227 454
292 iso_pu_bacteria 2808606372 2808900104 454
293 iso_pu_bacteria 2775506735 2775657899 455
294 iso_pu_bacteria 2791354901 2791916369 455
295 iso_pu_bacteria 2808606357 2808829513 455
296 iso_pu_bacteria 2808606370 2808893822 455
297 iso_pu_bacteria 2811994871 2812318789 455
298 iso_pu_bacteria 2945920336 2945923372 455
299 iso_pu_bacteria 2946037020 2946040910 455
300 iso_pu_bacteria 2953998280 2954002156 455
301 iso_pu_bacteria 2738541272 2738697869 456
302 iso_pu_bacteria 2738543027 2739326718 456
303 iso_pu_bacteria 2739367654 2739604751 456
304 iso_pu_bacteria 2654587600 2655033759 457
305 iso_pu_bacteria 2808606394 2809027938 457
306 iso_pu_bacteria 2832004796 2832007866 457
307 iso_pu_bacteria 2866065130 2866065655 457
308 iso_pu_bacteria 2905926851 2905929964 457
309 iso_pu_bacteria 2974302888 2974304530 457
310 iso_pu_bacteria 2690315906 2691511910 464
311 3300000549 LJQas_1000340 LJQas_10003402 468

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01970

TctA

Tripartite tricarboxylate transporter TctA family

16

434

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7z6n-assembly1.cif.gz_A crystal structure of zn2+-transporter bbzip in a metal-stripped state 0.254 55 443
7z6n-assembly1.cif.gz_A crystal structure of zn2+-transporter bbzip in a metal-stripped state 0.2505 55 443
7uv0-assembly1.cif.gz_A structure of the sodium/iodide symporter (nis) in complex with iodide and sodium 0.2336 24 446
7sun-assembly1.cif.gz_B atomic model of prestin from gerbil (meriones unguiculatus) 0.2298 23 393
8csl-assembly1.cif.gz_Y sub-tomogram averaging of erythrocyte ankyrin-1 complex 0.2185 6 424
ID Description Score Start End Superfamily
af_A0A1D8PLY7_278_479_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2948 186 403 1.20.1250.20
af_Q4DAY3_330_514_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2921 185 410 1.20.1250.20
af_A4I7C5_38_257_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.292 186 442 1.20.1250.20
af_Q4DAY3_330_514_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2897 185 410 1.20.1250.20
af_A4I7C5_38_257_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2801 186 442 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A260RAP4-F1-model_v4 deleted 0.8055 6 453
AF-A0A366DV98-F1-model_v4 Putative tricarboxylic transport membrane protein 0.8052 6 456 GO:0016020
AF-A0A410HBN9-F1-model_v4 deleted 0.804 6 456
AF-A0A200H7Z9-F1-model_v4 Tripartite tricarboxylate transporter TctA 0.8038 8 457 GO:0016020
AF-A0A5C5RW84-F1-model_v4 Tripartite tricarboxylate transporter permease 0.8034 8 457 GO:0016020

Feature Viewer

pLDDT pTM Quality
76.55 0.72 High
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Predicted Structure (AlphaFold2)

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