F401327

General Info

Members Datasets Scaffolds Average Seq Length
311 243 622 703

Family's Representative Sequence

Representative Sequence 3300042007|Ga0439449_0000036|Ga0439449_0000036_1728_4019
Length 763
Sequence MSSETTASTEMTAERLHVAGLHAPGYAPADAVLSVRDLNVRFNSENGVVHAVRGVDFDLLPGKTLGIVGESGSGKSVTSLAIMGLLPPTAGVTGSVRLNGTELLGLSDKAMCRYRGNDLAMVFQDPLSSLTPVYTVGHQIIEALTVHHPKMSKQATEARAVELLGMVGIPSPKDRLKAFPHEFSGGMRQRVMIAIAIANNPRVLIADEPTTALDVTIQAQVLEVLHTAQEETGAAVVMITHDLGVVAGMADDIMVMYAGKPVETGSVEDIYYNPRMPYTMGLLGAVPRVDASEKISLVPIEGIPPNLIHSPTGCSFAPRCPLVGDACLHGEPELRAVGGPPEAGNGLPGNGTHKAACVKTDSLGADVDVHEIFQAPAVPVSRFDAVPRLERRTVLELKDVRKHFPLLKGSLIKRRIGTVKAVDGLSFDIREGECFSIVGESGCGKTTTLLEIMEFHKDQDGEVTIGGLSNKAASDARTKSAMRKELQMVFQDPTGALDPRFTVYEVLSEPLENAGMAKPAIRKRIMELMQLVGLQPDHVNRFPNQFSGGQRQRIGIARALAVNPKLVVLDEPVSALDVSVQAGVINLLDKLRAELGLSYLMVAHDLSVVRHISNRVAVMYLGKIVEIGDVDNVFDNPRHPYTRALLSAIPVPDPRLERTRERIILQGDLPSPLDAPTGCNFATRCPVFAALPAAKQEKCLTLEPPLEPVGSPQVTAAATAAPDQQFACFFPDGELDADMLIVHETDLPDPQSTNLAPKMKGKP

Samples

Sample ID Description Type Environment
1 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
63 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
106 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
107 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
108 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
109 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
110 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
114 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
117 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
118 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
119 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
120 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
121 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
122 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
123 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
124 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
125 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
126 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
127 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
128 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
129 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
130 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
131 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
132 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
137 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
138 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
139 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
140 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
141 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
142 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
143 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
144 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
145 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
146 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
147 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
148 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
149 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
150 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
151 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
152 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
153 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
156 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
157 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
158 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
159 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
160 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
161 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
162 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
163 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
164 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
165 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
166 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
167 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
168 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
169 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
170 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
171 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
172 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
173 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
174 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
175 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
176 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
177 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
178 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
179 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
187 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
188 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
189 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
190 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
191 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
192 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
193 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
194 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
195 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
196 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
197 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
198 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
199 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
200 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
201 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
202 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
203 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
204 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
205 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
206 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
207 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
208 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
209 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
210 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
211 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
212 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
213 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
214 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
215 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
216 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
217 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
218 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
219 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
220 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
221 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
222 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
223 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
224 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
225 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
226 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
227 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
228 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
229 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
230 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
231 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
232 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
233 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
234 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
235 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
236 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
237 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
238 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
239 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
240 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
241 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
242 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
243 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 84.57
Metatranscriptomes 0.32
Isolates 15.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.14
Nodule 0
Rhizoplane 6.11
Rhizosphere 79.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439449_0000036 3300042007 Bacteria 39721
2 LJQas_1000657 3300000549 Bacteria 5564
3 LJQas_1002399 3300000549 Bacteria 2609
4 JGI25152J39213_1001239 3300002773 Bacteria 11661
5 JGI25407J50210_10000928 3300003373 Bacteria 6298
6 Ga0070658_10001733 3300005327 Bacteria 18381
7 Ga0070658_10014014 3300005327 Bacteria 6436
8 Ga0070658_10075851 3300005327 Bacteria 2758
9 Ga0070676_10007246 3300005328 Bacteria 5946
10 Ga0070683_100023761 3300005329 Bacteria 5485
11 Ga0070690_100000572 3300005330 Bacteria 18582
12 Ga0070670_100000823 3300005331 Bacteria 24221
13 Ga0070670_100052326 3300005331 Bacteria 3507
14 Ga0070680_100044724 3300005336 Bacteria 3598
15 Ga0068868_100015321 3300005338 Bacteria 5667
16 Ga0068868_100020646 3300005338 Bacteria 4954
17 Ga0070661_100015990 3300005344 Bacteria 5297
18 Ga0070692_10017666 3300005345 Bacteria 3416
19 Ga0070668_100072626 3300005347 Bacteria 2681
20 Ga0070675_100000067 3300005354 Bacteria 61233
21 Ga0070675_100000553 3300005354 Bacteria 25717
22 Ga0070675_100002464 3300005354 Bacteria 13839
23 Ga0070673_100001005 3300005364 Bacteria 16009
24 Ga0070673_100012064 3300005364 Bacteria 5921
25 Ga0070659_100000415 3300005366 Bacteria 32411
26 Ga0070659_100027570 3300005366 Bacteria 4379
27 Ga0070667_100002022 3300005367 Bacteria 17968
28 Ga0070714_100000100 3300005435 Bacteria 73241
29 Ga0070710_10012615 3300005437 Bacteria 4202
30 Ga0070711_100026687 3300005439 Bacteria 3787
31 Ga0070705_100011530 3300005440 Bacteria 4463
32 Ga0070700_100005483 3300005441 Bacteria 6729
33 Ga0070681_10026360 3300005458 Bacteria 5843
34 Ga0070679_100005306 3300005530 Bacteria 11933
35 Ga0070672_100001774 3300005543 Bacteria 13487
36 Ga0070664_100000104 3300005564 Bacteria 54810
37 Ga0070664_100044093 3300005564 Bacteria 3766
38 Ga0068859_100003383 3300005617 Bacteria 16223
39 Ga0068859_100011720 3300005617 Bacteria 8809
40 Ga0068859_100029861 3300005617 Bacteria 5469
41 Ga0068864_100002589 3300005618 Bacteria 14936
42 Ga0068863_100001527 3300005841 Bacteria 22878
43 Ga0068863_100003426 3300005841 Bacteria 15631
44 Ga0068860_100019379 3300005843 Bacteria 6598
45 Ga0081538_10000708 3300005981 Bacteria 36607
46 Ga0081539_10000015 3300005985 Bacteria 395781
47 Ga0075365_10013091 3300006038 Bacteria 4947
48 Ga0075363_100006704 3300006048 Bacteria 5255
49 Ga0075364_10004274 3300006051 Bacteria 8203
50 Ga0075432_10001997 3300006058 Bacteria 6777
51 Ga0075362_10000949 3300006177 Bacteria 8859
52 Ga0075367_10028886 3300006178 Bacteria 3167
53 Ga0097621_100009381 3300006237 Bacteria 7101
54 Ga0097621_100013790 3300006237 Bacteria 6033
55 Ga0075428_100002085 3300006844 Bacteria 21566
56 Ga0075430_100003626 3300006846 Bacteria 12948
57 Ga0075430_100033669 3300006846 Bacteria 4349
58 Ga0075431_100007213 3300006847 Bacteria 11058
59 Ga0075429_100001362 3300006880 Bacteria 19975
60 Ga0097620_100003383 3300006931 Bacteria 16223
61 Ga0097620_100011720 3300006931 Bacteria 8809
62 Ga0097620_100029862 3300006931 Bacteria 5469
63 Ga0111539_10018640 3300009094 Bacteria 8595
64 Ga0105245_10019694 3300009098 Bacteria 5914
65 Ga0105245_10087266 3300009098 Bacteria 2864
66 Ga0114129_10003843 3300009147 Bacteria 21172
67 Ga0105243_10001310 3300009148 Bacteria 22222
68 Ga0105248_10000752 3300009177 Bacteria 36382
69 Ga0105248_10001863 3300009177 Bacteria 23375
70 Ga0105248_10019246 3300009177 Bacteria 7554
71 Ga0105239_10034579 3300010375 Bacteria 5550
72 Ga0105246_10002034 3300011119 Bacteria 12207
73 Ga0105246_10006164 3300011119 Bacteria 7319
74 Ga0157373_10003130 3300013100 Bacteria 12498
75 Ga0157369_10007534 3300013105 Bacteria 12524
76 Ga0163162_10000760 3300013306 Bacteria 30030
77 Ga0163162_10002851 3300013306 Bacteria 16456
78 Ga0157372_10000023 3300013307 Bacteria 198536
79 Ga0157375_10000563 3300013308 Bacteria 33386
80 Ga0157375_10000740 3300013308 Bacteria 28644
81 Ga0157380_10033073 3300014326 Bacteria 3980
82 Ga0157379_10000236 3300014968 Bacteria 43430
83 Ga0163161_10021771 3300017792 Bacteria 4507
84 Ga0163161_10023215 3300017792 Bacteria 4373
85 Ga0213875_10014636 3300021388 Bacteria 3826
86 Ga0209129_1000518 3300025258 Bacteria 27541
87 Ga0209025_1000369 3300025294 Bacteria 94915
88 Ga0209051_1001812 3300025303 Bacteria 16941
89 Ga0209051_1011009 3300025303 Bacteria 4509
90 Ga0207697_10001581 3300025315 Bacteria 12314
91 Ga0207647_10024916 3300025904 Bacteria 3939
92 Ga0207645_10000166 3300025907 Bacteria 52485
93 Ga0207705_10002348 3300025909 Bacteria 14626
94 Ga0207705_10013655 3300025909 Bacteria 5859
95 Ga0207707_10015399 3300025912 Bacteria 6661
96 Ga0207660_10020806 3300025917 Bacteria 4409
97 Ga0207660_10047539 3300025917 Bacteria 3034
98 Ga0207649_10020610 3300025920 Bacteria 3783
99 Ga0207652_10003906 3300025921 Bacteria 12188
100 Ga0207650_10000506 3300025925 Bacteria 32559
101 Ga0207650_10014174 3300025925 Bacteria 5537
102 Ga0207650_10043881 3300025925 Bacteria 3284
103 Ga0207659_10000278 3300025926 Bacteria 31016
104 Ga0207659_10001599 3300025926 Bacteria 13441
105 Ga0207687_10007763 3300025927 Bacteria 7038
106 Ga0207664_10000002 3300025929 Bacteria 657053
107 Ga0207644_10011742 3300025931 Bacteria 5798
108 Ga0207690_10000993 3300025932 Bacteria 18152
109 Ga0207670_10007927 3300025936 Bacteria 5964
110 Ga0207704_10011316 3300025938 Bacteria 4387
111 Ga0207691_10000225 3300025940 Bacteria 55028
112 Ga0207691_10056252 3300025940 Bacteria 3584
113 Ga0207711_10030067 3300025941 Bacteria 4581
114 Ga0207679_10002205 3300025945 Bacteria 12038
115 Ga0207651_10003716 3300025960 Bacteria 7551
116 Ga0207651_10016856 3300025960 Bacteria 4296
117 Ga0207677_10004774 3300026023 Bacteria 7312
118 Ga0207703_10012963 3300026035 Bacteria 6497
119 Ga0207678_10025583 3300026067 Bacteria 5152
120 Ga0207708_10004277 3300026075 Bacteria 10515
121 Ga0207641_10005825 3300026088 Bacteria 10455
122 Ga0207676_10001408 3300026095 Bacteria 17857
123 Ga0207675_100007941 3300026118 Bacteria 10006
124 Ga0207675_100030640 3300026118 Bacteria 5010
125 Ga0207683_10010420 3300026121 Bacteria 7930
126 Ga0207683_10019142 3300026121 Bacteria 5844
127 Ga0207428_10013679 3300027907 Bacteria 7078
128 Ga0268264_10014966 3300028381 Bacteria 6368
129 Ga0307515_10059104 3300028794 Bacteria 5503
130 Ga0265338_10004017 3300028800 Bacteria 20193
131 Ga0265339_10002910 3300031249 Bacteria 12115
132 Ga0307408_100009003 3300031548 Bacteria 6594
133 Ga0307408_100043873 3300031548 Bacteria 3183
134 Ga0265313_10002949 3300031595 Bacteria 14200
135 Ga0307405_10007231 3300031731 Bacteria 5532
136 Ga0307405_10027611 3300031731 Bacteria 3293
137 Ga0307410_10002718 3300031852 Bacteria 8636
138 Ga0307410_10007330 3300031852 Bacteria 6030
139 Ga0307412_10026300 3300031911 Bacteria 3615
140 Ga0307409_100008373 3300031995 Bacteria 6271
141 Ga0307409_100013415 3300031995 Bacteria 5273
142 Ga0307409_100036832 3300031995 Bacteria 3600
143 Ga0307414_10003244 3300032004 Bacteria 8662
144 Ga0307411_10015047 3300032005 Bacteria 4328
145 Ga0307415_100028460 3300032126 Bacteria 3556
146 Ga0307507_10028466 3300033179 Bacteria 5955
147 Ga0307510_10048913 3300033180 Bacteria 4504
148 Ga0373951_0000001 3300035091 Bacteria 119231
149 Ga0373955_0070438 3300035172 Bacteria 1954
150 Ga0373937_0020594 3300036401 Bacteria 5912
151 Ga0373937_0098523 3300036401 Bacteria 2711
152 Ga0395899_0009945 3300037312 Bacteria 7296
153 Ga0395898_0020131 3300037466 Bacteria 6778
154 Ga0395898_0029355 3300037466 Bacteria 5510
155 Ga0436364_0390206 3300037853 Bacteria 14084
156 Ga0395901_0041911 3300038443 Bacteria 4745
157 Ga0400483_058405 3300039062 Bacteria 48689
158 Ga0439438_006397 3300041405 Bacteria 4164
159 Ga0439439_0000330 3300041406 Bacteria 7671
160 Ga0451797_1369186 3300041453 Bacteria 2967
161 Ga0439433_0000460 3300041999 Bacteria 7508
162 Ga0439433_0001426 3300041999 Bacteria 4930
163 Ga0439433_0002579 3300041999 Bacteria 3848
164 Ga0439442_000028 3300042002 Bacteria 33584
165 Ga0439442_000202 3300042002 Bacteria 14923
166 Ga0439432_002607 3300042006 Bacteria 6779
167 Ga0439452_001011 3300042010 Bacteria 12449
168 Ga0439457_000632 3300042014 Bacteria 10382
169 Ga0439457_001969 3300042014 Bacteria 6038
170 Ga0450920_000031 3300042122 Bacteria 16770
171 Ga0450907_000343 3300042146 Bacteria 14667
172 Ga0450908_003140 3300042184 Bacteria 3219
173 Ga0439434_0000181 3300042435 Bacteria 17155
174 Ga0439434_0001240 3300042435 Bacteria 7343
175 Ga0466972_0005129 3300044658 Bacteria 6559
176 Ga0466972_0037781 3300044658 Bacteria 2360
177 Ga0466966_0012638 3300044684 Bacteria 5596
178 Ga0466966_0031447 3300044684 Bacteria 3442
179 Ga0466963_0011849 3300044694 Bacteria 5321
180 Ga0466968_0007786 3300044735 Bacteria 4084
181 Ga0466957_0009444 3300044842 Bacteria 5568
182 Ga0466960_0005617 3300044901 Bacteria 4976
183 Ga0466967_0051267 3300045976 Bacteria 3615
184 Ga0495592_0003478 3300046454 Bacteria 11300
185 Ga0495592_0006451 3300046454 Bacteria 8733
186 Ga0495603_0003065 3300046455 Bacteria 9919
187 Ga0495629_0009509 3300046459 Bacteria 7104
188 Ga0495651_0013557 3300046462 Bacteria 6302
189 Ga0495653_0019162 3300046463 Bacteria 5551
190 Ga0495662_0000222 3300046476 Bacteria 23880
191 Ga0495664_0003022 3300046477 Bacteria 9105
192 Ga0495608_0012458 3300046511 Bacteria 5901
193 Ga0495608_0055004 3300046511 Bacteria 2630
194 Ga0495628_0000880 3300046516 Bacteria 27703
195 Ga0495666_0001437 3300046526 Bacteria 11577
196 Ga0495652_0021382 3300046529 Bacteria 5752
197 Ga0495665_0002369 3300046531 Bacteria 10170
198 Ga0495640_0025851 3300046533 Bacteria 4251
199 Ga0495586_0021646 3300046535 Bacteria 3429
200 Ga0495587_0004295 3300046536 Bacteria 9413
201 Ga0495587_0006722 3300046536 Bacteria 7488
202 Ga0495645_0005600 3300046543 Bacteria 8640
203 Ga0495645_0009195 3300046543 Bacteria 6904
204 Ga0495667_0005741 3300046559 Bacteria 8404
205 Ga0495667_0017146 3300046559 Bacteria 4891
206 Ga0495634_0027681 3300046642 Bacteria 3942
207 Ga0495635_0035406 3300046663 Bacteria 3461
208 Ga0495657_0004046 3300046675 Bacteria 11759
209 Ga0495657_0022228 3300046675 Bacteria 4547
210 Ga0495646_0003150 3300046680 Bacteria 10237
211 Ga0495613_0005633 3300046689 Bacteria 9395
212 Ga0495613_0027888 3300046689 Bacteria 4204
213 Ga0495670_0013232 3300046691 Bacteria 4057
214 Ga0495600_0010495 3300046809 Bacteria 5752
215 Ga0495581_0013898 3300047315 Bacteria 4667
216 Ga0495604_0010235 3300047317 Bacteria 7428
217 Ga0495604_0013381 3300047317 Bacteria 6534
218 Ga0495636_0011440 3300047318 Bacteria 3512
219 Ga0495674_0010750 3300047319 Bacteria 8657
220 Ga0495676_0013663 3300047321 Bacteria 7286
221 Ga0495680_0017151 3300047322 Bacteria 6195
222 Ga0495675_0022428 3300047444 Bacteria 4024
223 Ga0495684_0006566 3300047471 Bacteria 9020
224 Ga0495684_0015853 3300047471 Bacteria 5801
225 Ga0495602_0029769 3300048088 Bacteria 5191
226 Ga0496100_0009434 3300048903 Bacteria 5485
227 Ga0496101_0008276 3300048904 Bacteria 6794
228 Ga0496101_0017577 3300048904 Bacteria 4851
229 Ga0496102_0085667 3300048905 Bacteria 2909
230 Ga0496105_0014265 3300048908 Bacteria 6324
231 Ga0496106_0009082 3300048909 Bacteria 7346
232 Ga0496106_0016393 3300048909 Bacteria 5482
233 Ga0496106_0018902 3300048909 Bacteria 5105
234 Ga0496107_0004794 3300048910 Bacteria 9187
235 Ga0496107_0020064 3300048910 Bacteria 4719
236 Ga0496108_0014393 3300048911 Bacteria 6459
237 Ga0496108_0037224 3300048911 Bacteria 4052
238 Ga0496109_0007410 3300048912 Bacteria 9287
239 Ga0496109_0009005 3300048912 Bacteria 8500
240 Ga0496109_0036909 3300048912 Bacteria 4413
241 Ga0496110_0023590 3300048913 Bacteria 5234
242 Ga0496110_0116849 3300048913 Bacteria 2401
243 Ga0496113_0029921 3300048916 Bacteria 3937
244 Ga0501310_000156 3300049130 Bacteria 6694
245 Ga0501032_0001066 3300049569 Bacteria 21921
246 Ga0501034_0000038 3300049571 Bacteria 237795
247 Ga0501036_0033447 3300049572 Bacteria 4349
248 Ga0501037_0026703 3300049573 Bacteria 4267
249 Ga0501038_0028610 3300049574 Bacteria 4951
250 Ga0501047_0005527 3300049581 Bacteria 11895
251 Ga0501044_0045466 3300049823 Bacteria 4548
252 Ga0501044_0100723 3300049823 Bacteria 2907
253 nmdc:mga03683_12707_c1 3300050489 Bacteria 3082
254 nmdc:mga03n38_1585_c1 3300050490 Bacteria 6623
255 nmdc:mga00v17_30091_c1 3300050491 Bacteria 3192
256 nmdc:mga0yw44_19533_c1 3300050492 Bacteria 3739
257 nmdc:mga0yw44_5018_c1 3300050492 Bacteria 6185
258 nmdc:mga05p37_784_c1 3300050507 Bacteria 35360
259 nmdc:mga09592_25_c2 3300050508 Bacteria 39915
260 nmdc:mga0qj67_199_c1 3300050509 Bacteria 27735
261 nmdc:mga06r32_603_c1 3300050510 Bacteria 19937
262 nmdc:mga08y16_21128_c1 3300050511 Bacteria 6872
263 nmdc:mga0sz30_6738_c1 3300050516 Bacteria 4281
264 Ga0495619_0017876 3300053085 Bacteria 4494
265 2558914353 2558860112 Bacteria 9931328
266 2644013432 2643221601 Bacteria 7493239
267 2644179388 2643221631 Bacteria 8168043
268 2676495519 2675903060 Bacteria 10051191
269 2691511863 2690315906 Bacteria 4517044
270 2775657212 2775506735 Bacteria 4556596
271 2784472395 2784132109 Bacteria 3141763
272 2795781396 2795385470 Bacteria 8317180
273 2808829045 2808606357 Bacteria 4466944
274 2808850269 2808606360 Bacteria 4404006
275 2808877181 2808606366 Bacteria 4415912
276 2808893289 2808606370 Bacteria 4942454
277 2808898641 2808606371 Bacteria 4251511
278 2812319219 2811994871 Bacteria 4497550
279 2844850653 2844849076 Bacteria 4091819
280 2857743975 2857740372 Bacteria 4782044
281 2862184188 2862178590 Bacteria 8583590
282 2870783598 2870782633 Bacteria 9624083
283 2870783601 2870782633 Bacteria 9624083
284 2873318096 2873314349 Bacteria 8512634
285 2883826156 2883821847 Bacteria 5121194
286 2891327506 2891326441 Bacteria 6439512
287 2895435295 2895427314 Bacteria 13147766
288 2904499032 2904497146 Bacteria 4731781
289 2904779853 2904776348 Bacteria 4658726
290 2910814448 2910809715 Bacteria 4982797
291 2917741497 2917736166 Bacteria 9690793
292 2919036646 2919034639 Bacteria 4763403
293 2919061010 2919059106 Bacteria 4991624
294 2919541407 2919538618 Bacteria 4677069
295 2932430078 2932426870 Bacteria 4547726
296 2933422274 2933418574 Bacteria 4476724
297 2939601856 2939598168 Bacteria 4687164
298 2939649403 2939647034 Bacteria 4681660
299 2939678590 2939674588 Bacteria 4844420
300 2945916972 2945916053 Bacteria 4555517
301 2945922780 2945920336 Bacteria 4501603
302 2945945432 2945941187 Bacteria 4682474
303 2946027339 2946024296 Bacteria 3508095
304 2946041531 2946037020 Bacteria 4900426
305 2954002735 2953998280 Bacteria 4812144
306 2966926258 2966924647 Bacteria 3268643
307 2974304961 2974302888 Bacteria 4369871
308 8002812484 8002811521 Bacteria 2942897
309 8055067739 8055066027 Bacteria 9479577
310 8055177023 8055172936 Bacteria 9305943
311 8056066612 8056060235 Bacteria 7259403
312 Ga0439449_0000036
313 LJQas_1000657
314 LJQas_1002399
315 JGI25152J39213_1001239
316 JGI25407J50210_10000928
317 Ga0070658_10001733
318 Ga0070658_10014014
319 Ga0070658_10075851
320 Ga0070676_10007246
321 Ga0070683_100023761
322 Ga0070690_100000572
323 Ga0070670_100000823
324 Ga0070670_100052326
325 Ga0070680_100044724
326 Ga0068868_100015321
327 Ga0068868_100020646
328 Ga0070661_100015990
329 Ga0070692_10017666
330 Ga0070668_100072626
331 Ga0070675_100000067
332 Ga0070675_100000553
333 Ga0070675_100002464
334 Ga0070673_100001005
335 Ga0070673_100012064
336 Ga0070659_100000415
337 Ga0070659_100027570
338 Ga0070667_100002022
339 Ga0070714_100000100
340 Ga0070710_10012615
341 Ga0070711_100026687
342 Ga0070705_100011530
343 Ga0070700_100005483
344 Ga0070681_10026360
345 Ga0070679_100005306
346 Ga0070672_100001774
347 Ga0070664_100000104
348 Ga0070664_100044093
349 Ga0068859_100003383
350 Ga0068859_100011720
351 Ga0068859_100029861
352 Ga0068864_100002589
353 Ga0068863_100001527
354 Ga0068863_100003426
355 Ga0068860_100019379
356 Ga0081538_10000708
357 Ga0081539_10000015
358 Ga0075365_10013091
359 Ga0075363_100006704
360 Ga0075364_10004274
361 Ga0075432_10001997
362 Ga0075362_10000949
363 Ga0075367_10028886
364 Ga0097621_100009381
365 Ga0097621_100013790
366 Ga0075428_100002085
367 Ga0075430_100003626
368 Ga0075430_100033669
369 Ga0075431_100007213
370 Ga0075429_100001362
371 Ga0097620_100003383
372 Ga0097620_100011720
373 Ga0097620_100029862
374 Ga0111539_10018640
375 Ga0105245_10019694
376 Ga0105245_10087266
377 Ga0114129_10003843
378 Ga0105243_10001310
379 Ga0105248_10000752
380 Ga0105248_10001863
381 Ga0105248_10019246
382 Ga0105239_10034579
383 Ga0105246_10002034
384 Ga0105246_10006164
385 Ga0157373_10003130
386 Ga0157369_10007534
387 Ga0163162_10000760
388 Ga0163162_10002851
389 Ga0157372_10000023
390 Ga0157375_10000563
391 Ga0157375_10000740
392 Ga0157380_10033073
393 Ga0157379_10000236
394 Ga0163161_10021771
395 Ga0163161_10023215
396 Ga0213875_10014636
397 Ga0209129_1000518
398 Ga0209025_1000369
399 Ga0209051_1001812
400 Ga0209051_1011009
401 Ga0207697_10001581
402 Ga0207647_10024916
403 Ga0207645_10000166
404 Ga0207705_10002348
405 Ga0207705_10013655
406 Ga0207707_10015399
407 Ga0207660_10020806
408 Ga0207660_10047539
409 Ga0207649_10020610
410 Ga0207652_10003906
411 Ga0207650_10000506
412 Ga0207650_10014174
413 Ga0207650_10043881
414 Ga0207659_10000278
415 Ga0207659_10001599
416 Ga0207687_10007763
417 Ga0207664_10000002
418 Ga0207644_10011742
419 Ga0207690_10000993
420 Ga0207670_10007927
421 Ga0207704_10011316
422 Ga0207691_10000225
423 Ga0207691_10056252
424 Ga0207711_10030067
425 Ga0207679_10002205
426 Ga0207651_10003716
427 Ga0207651_10016856
428 Ga0207677_10004774
429 Ga0207703_10012963
430 Ga0207678_10025583
431 Ga0207708_10004277
432 Ga0207641_10005825
433 Ga0207676_10001408
434 Ga0207675_100007941
435 Ga0207675_100030640
436 Ga0207683_10010420
437 Ga0207683_10019142
438 Ga0207428_10013679
439 Ga0268264_10014966
440 Ga0307515_10059104
441 Ga0265338_10004017
442 Ga0265339_10002910
443 Ga0307408_100009003
444 Ga0307408_100043873
445 Ga0265313_10002949
446 Ga0307405_10007231
447 Ga0307405_10027611
448 Ga0307410_10002718
449 Ga0307410_10007330
450 Ga0307412_10026300
451 Ga0307409_100008373
452 Ga0307409_100013415
453 Ga0307409_100036832
454 Ga0307414_10003244
455 Ga0307411_10015047
456 Ga0307415_100028460
457 Ga0307507_10028466
458 Ga0307510_10048913
459 Ga0373951_0000001
460 Ga0373955_0070438
461 Ga0373937_0020594
462 Ga0373937_0098523
463 Ga0395899_0009945
464 Ga0395898_0020131
465 Ga0395898_0029355
466 Ga0436364_0390206
467 Ga0395901_0041911
468 Ga0400483_058405
469 Ga0439438_006397
470 Ga0439439_0000330
471 Ga0451797_1369186
472 Ga0439433_0000460
473 Ga0439433_0001426
474 Ga0439433_0002579
475 Ga0439442_000028
476 Ga0439442_000202
477 Ga0439432_002607
478 Ga0439452_001011
479 Ga0439457_000632
480 Ga0439457_001969
481 Ga0450920_000031
482 Ga0450907_000343
483 Ga0450908_003140
484 Ga0439434_0000181
485 Ga0439434_0001240
486 Ga0466972_0005129
487 Ga0466972_0037781
488 Ga0466966_0012638
489 Ga0466966_0031447
490 Ga0466963_0011849
491 Ga0466968_0007786
492 Ga0466957_0009444
493 Ga0466960_0005617
494 Ga0466967_0051267
495 Ga0495592_0003478
496 Ga0495592_0006451
497 Ga0495603_0003065
498 Ga0495629_0009509
499 Ga0495651_0013557
500 Ga0495653_0019162
501 Ga0495662_0000222
502 Ga0495664_0003022
503 Ga0495608_0012458
504 Ga0495608_0055004
505 Ga0495628_0000880
506 Ga0495666_0001437
507 Ga0495652_0021382
508 Ga0495665_0002369
509 Ga0495640_0025851
510 Ga0495586_0021646
511 Ga0495587_0004295
512 Ga0495587_0006722
513 Ga0495645_0005600
514 Ga0495645_0009195
515 Ga0495667_0005741
516 Ga0495667_0017146
517 Ga0495634_0027681
518 Ga0495635_0035406
519 Ga0495657_0004046
520 Ga0495657_0022228
521 Ga0495646_0003150
522 Ga0495613_0005633
523 Ga0495613_0027888
524 Ga0495670_0013232
525 Ga0495600_0010495
526 Ga0495581_0013898
527 Ga0495604_0010235
528 Ga0495604_0013381
529 Ga0495636_0011440
530 Ga0495674_0010750
531 Ga0495676_0013663
532 Ga0495680_0017151
533 Ga0495675_0022428
534 Ga0495684_0006566
535 Ga0495684_0015853
536 Ga0495602_0029769
537 Ga0496100_0009434
538 Ga0496101_0008276
539 Ga0496101_0017577
540 Ga0496102_0085667
541 Ga0496105_0014265
542 Ga0496106_0009082
543 Ga0496106_0016393
544 Ga0496106_0018902
545 Ga0496107_0004794
546 Ga0496107_0020064
547 Ga0496108_0014393
548 Ga0496108_0037224
549 Ga0496109_0007410
550 Ga0496109_0009005
551 Ga0496109_0036909
552 Ga0496110_0023590
553 Ga0496110_0116849
554 Ga0496113_0029921
555 Ga0501310_000156
556 Ga0501032_0001066
557 Ga0501034_0000038
558 Ga0501036_0033447
559 Ga0501037_0026703
560 Ga0501038_0028610
561 Ga0501047_0005527
562 Ga0501044_0045466
563 Ga0501044_0100723
564 nmdc:mga03683_12707_c1
565 nmdc:mga03n38_1585_c1
566 nmdc:mga00v17_30091_c1
567 nmdc:mga0yw44_19533_c1
568 nmdc:mga0yw44_5018_c1
569 nmdc:mga05p37_784_c1
570 nmdc:mga09592_25_c2
571 nmdc:mga0qj67_199_c1
572 nmdc:mga06r32_603_c1
573 nmdc:mga08y16_21128_c1
574 nmdc:mga0sz30_6738_c1
575 Ga0495619_0017876
576 2558914353
577 2644013432
578 2644179388
579 2676495519
580 2691511863
581 2775657212
582 2784472395
583 2795781396
584 2808829045
585 2808850269
586 2808877181
587 2808893289
588 2808898641
589 2812319219
590 2844850653
591 2857743975
592 2862184188
593 2870783598
594 2870783601
595 2873318096
596 2883826156
597 2891327506
598 2895435295
599 2904499032
600 2904779853
601 2910814448
602 2917741497
603 2919036646
604 2919061010
605 2919541407
606 2932430078
607 2933422274
608 2939601856
609 2939649403
610 2939678590
611 2945916972
612 2945922780
613 2945945432
614 2946027339
615 2946041531
616 2954002735
617 2966926258
618 2974304961
619 8002812484
620 8055067739
621 8055177023
622 8056066612

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

262

327

0.99

PF00005

ABC_tran

ABC transporter

52

211

0.92

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

625

690

0.92

PF00005

ABC_tran

ABC transporter

422

574

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.9471 387 641
4fwi-assembly1.cif.gz_B crystal structure of the nucleotide-binding domain of a dipeptide abc transporter 0.9308 28 351
7cha-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with amppnp 0.9237 386 639
8ja7-assembly1.cif.gz_D cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.9206 386 638
7ch8-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9166 386 639
ID Description Score Start End Superfamily
af_P9WQJ5_2_332_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9889 28 366 3.40.50.300
af_P9WQJ5_2_332_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.986 28 366 3.40.50.300
af_P75796_10_305_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.967 29 297 3.40.50.300
af_Q2FZR1_3_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9641 28 351 3.40.50.300
af_I6Y482_6_279_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9613 29 285 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A537WAU2-F1-model_v4 ABC transporter ATP-binding protein 0.9756 47 286 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A385ZAV8-F1-model_v4 deleted 0.9751 492 651
AF-A0A7Z7LPF7-F1-model_v4 ABC transporter domain-containing protein 0.9744 23 351 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A095XMP1-F1-model_v4 deleted 0.9738 30 289
AF-A0A6G2QKZ1-F1-model_v4 ATP-binding cassette domain-containing protein 0.9734 29 280 GO:0005524
GO:0016887

Map