F400913

General Info

Members Datasets Scaffolds Average Seq Length
310 191 300 377

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0000732|Ga0501034_0000732_36164_37381
Length 405
Sequence MVPIRSATPQPEPEGRESLVTSDLADDPVQLLKALIACPSVTPETAGVLDVLDGALSTIGFTVTRLRFEGDGSYPVDNLFAVRGTGGRRLLFAGHTDVVPPGELANWSADPFTPREADGKLYGRGAADMKSGIAAFIAACAAIPDDAGTIMLAITNDEEADAINGTDKLMAWAEAQQHHFDFAIVGEPSSAAALGDSIKIGRRGSLSGTITVTGIQGHVAYPDKANNPLPALARIVTALDTVIDTGTAHFPATNLEVISIDVGNAVSNVIPAAGTIRFNIRYNDLWTPETLADWVRGRIASVDPAGATVSFAVAGTPSRSFLSPLSGDVDLLSDAIAGVTGRRPEFSTGGGTSDARFIAQYGPVVECGLVGPSMHKADEHIAVSDLIGLTDIYRAFMVRFFGAGA

Samples

Sample ID Description Type Environment
1 2643221580 Devosia sp. Root635 Isolate Unclassified
2 2643221591 Devosia sp. Root685 Isolate Unclassified
3 2643221629 Devosia sp. Root105 Isolate Unclassified
4 2643221662 Devosia sp. Root413D1 Isolate Unclassified
5 2643221674 Devosia sp. Root436 Isolate Unclassified
6 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
7 2932401849 Devosia sp. 2618 Isolate Rhizosphere
8 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
9 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
10 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
11 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
12 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
74 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
75 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
76 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
80 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
117 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
118 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
119 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
120 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
123 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
124 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
125 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
126 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
133 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
134 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
135 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
136 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
137 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
138 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
139 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
140 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
143 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
144 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
145 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
146 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
149 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
155 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
158 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
161 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
162 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
163 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
174 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
175 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
180 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
181 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
182 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
185 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
186 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
187 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
188 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
189 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
190 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
191 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.77
Metatranscriptomes 0
Isolates 3.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.48
Nodule 0
Rhizoplane 3.23
Rhizosphere 74.19
Stem 0
Stem Tuber 0
Unclassified 7.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24744J21845_10016968 3300002077 Bacteria 1447
2 JGI25151J46595_10000253 3300003187 Bacteria 62673
3 JGI25151J46595_10007715 3300003187 Bacteria 5242
4 JGI25165J46597_1002595 3300003214 Bacteria 5508
5 rootH2_10043426 3300003320 Bacteria 3736
6 rootH2_10078224 3300003320 Bacteria 4473
7 Ga0055524_1010572 3300003775 Bacteria 3667
8 Ga0055524_1027406 3300003775 Bacteria 1730
9 Ga0055536_1006671 3300003781 Bacteria 5314
10 Ga0055536_1024947 3300003781 Bacteria 1716
11 Ga0055531_10004029 3300003794 Bacteria 9116
12 Ga0055531_10011534 3300003794 Bacteria 4247
13 Ga0055531_10013677 3300003794 Bacteria 3721
14 Ga0070658_10062431 3300005327 Bacteria 3036
15 Ga0070683_100050507 3300005329 Bacteria 3850
16 Ga0070666_10002195 3300005335 Bacteria 11833
17 Ga0070660_100031670 3300005339 Bacteria 3973
18 Ga0070660_100063060 3300005339 Bacteria 2880
19 Ga0070661_100001200 3300005344 Bacteria 18290
20 Ga0070661_100021672 3300005344 Bacteria 4593
21 Ga0070661_100223021 3300005344 Bacteria 1446
22 Ga0070671_100077585 3300005355 Bacteria 2776
23 Ga0070659_100085777 3300005366 Bacteria 2519
24 Ga0070659_100157672 3300005366 Bacteria 1854
25 Ga0070667_100386989 3300005367 Bacteria 1271
26 Ga0070713_100208274 3300005436 Bacteria 1769
27 Ga0070663_100016051 3300005455 Bacteria 4851
28 Ga0070678_100053151 3300005456 Bacteria 2944
29 Ga0070662_100261228 3300005457 Bacteria 1395
30 Ga0068853_100001761 3300005539 Bacteria 15903
31 Ga0068853_100006680 3300005539 Bacteria 9186
32 Ga0068853_100026029 3300005539 Bacteria 4911
33 Ga0068853_100050224 3300005539 Bacteria 3588
34 Ga0068853_100067364 3300005539 Bacteria 3110
35 Ga0068853_100090637 3300005539 Bacteria 2687
36 Ga0070672_100016748 3300005543 Bacteria 5256
37 Ga0070672_100037929 3300005543 Bacteria 3679
38 Ga0068855_100002876 3300005563 Bacteria 21122
39 Ga0070664_100034059 3300005564 Bacteria 4271
40 Ga0068857_100021429 3300005577 Bacteria 5688
41 Ga0068857_100081364 3300005577 Bacteria 2892
42 Ga0068854_100034069 3300005578 Bacteria 3554
43 Ga0068856_100004262 3300005614 Bacteria 14281
44 Ga0068856_100007929 3300005614 Bacteria 10374
45 Ga0068856_100034261 3300005614 Bacteria 4973
46 Ga0068856_100190667 3300005614 Bacteria 2063
47 Ga0068852_100021543 3300005616 Bacteria 5149
48 Ga0068852_100022759 3300005616 Bacteria 5031
49 Ga0068852_100029465 3300005616 Bacteria 4510
50 Ga0068852_100039104 3300005616 Bacteria 3992
51 Ga0068859_100013179 3300005617 Bacteria 8301
52 Ga0068864_100005410 3300005618 Bacteria 10466
53 Ga0068851_10000742 3300005834 Bacteria 13964
54 Ga0068851_10091029 3300005834 Bacteria 1606
55 Ga0068863_100040174 3300005841 Bacteria 4449
56 Ga0068863_100124109 3300005841 Bacteria 2463
57 Ga0068863_100314006 3300005841 Bacteria 1522
58 Ga0068860_100001143 3300005843 Bacteria 29112
59 Ga0068860_100073225 3300005843 Bacteria 3257
60 Ga0075363_100014220 3300006048 Bacteria 3882
61 Ga0075364_10041802 3300006051 Bacteria 2978
62 Ga0075362_10003246 3300006177 Bacteria 5646
63 Ga0097621_100092292 3300006237 Bacteria 2536
64 Ga0097621_100172272 3300006237 Bacteria 1866
65 Ga0068871_100049737 3300006358 Bacteria 3389
66 Ga0068871_100081885 3300006358 Bacteria 2675
67 Ga0075430_100004786 3300006846 Bacteria 11390
68 Ga0097620_100013179 3300006931 Bacteria 8301
69 Ga0105240_10002056 3300009093 Bacteria 32992
70 Ga0105240_10002324 3300009093 Bacteria 30759
71 Ga0105240_10015221 3300009093 Bacteria 10466
72 Ga0105240_10042556 3300009093 Bacteria 5787
73 Ga0111539_10164580 3300009094 Bacteria 2594
74 Ga0105245_10240935 3300009098 Bacteria 1753
75 Ga0105241_10001947 3300009174 Bacteria 15631
76 Ga0105241_10009403 3300009174 Bacteria 7180
77 Ga0105242_10045466 3300009176 Bacteria 3558
78 Ga0105248_10282402 3300009177 Bacteria 1869
79 Ga0105237_10000459 3300009545 Bacteria 57762
80 Ga0105237_10034173 3300009545 Bacteria 5150
81 Ga0105237_10051032 3300009545 Bacteria 4157
82 Ga0105237_10186278 3300009545 Bacteria 2075
83 Ga0105238_10000887 3300009551 Bacteria 30803
84 Ga0105238_10007110 3300009551 Bacteria 11199
85 Ga0105238_10014143 3300009551 Bacteria 8070
86 Ga0105238_10024862 3300009551 Bacteria 6104
87 Ga0105238_10030741 3300009551 Bacteria 5467
88 Ga0105238_10038247 3300009551 Bacteria 4873
89 Ga0105238_10052480 3300009551 Bacteria 4099
90 Ga0105238_10331870 3300009551 Bacteria 1508
91 Ga0105249_10092963 3300009553 Bacteria 2825
92 Ga0105239_10002667 3300010375 Bacteria 22492
93 Ga0105239_10011120 3300010375 Bacteria 10046
94 Ga0105239_10016846 3300010375 Bacteria 8077
95 Ga0105239_10102777 3300010375 Bacteria 3163
96 Ga0105239_10120578 3300010375 Bacteria 2912
97 Ga0105246_10039616 3300011119 Bacteria 3176
98 Ga0157373_10026162 3300013100 Bacteria 4217
99 Ga0157373_10076808 3300013100 Bacteria 2357
100 Ga0157371_10003499 3300013102 Bacteria 14193
101 Ga0157370_10057663 3300013104 Bacteria 3692
102 Ga0157370_10074670 3300013104 Bacteria 3198
103 Ga0157369_10004444 3300013105 Bacteria 16530
104 Ga0157369_10019354 3300013105 Bacteria 7616
105 Ga0157369_10027660 3300013105 Bacteria 6284
106 Ga0157374_10087424 3300013296 Bacteria 2967
107 Ga0163162_10000016 3300013306 Bacteria 250836
108 Ga0163162_10042630 3300013306 Bacteria 4543
109 Ga0157372_10001477 3300013307 Bacteria 25522
110 Ga0157372_10099821 3300013307 Bacteria 3312
111 Ga0157372_10123991 3300013307 Bacteria 2970
112 Ga0157375_10001733 3300013308 Bacteria 18741
113 Ga0163163_10000197 3300014325 Bacteria 62158
114 Ga0157379_10020524 3300014968 Bacteria 5843
115 Ga0157376_10034514 3300014969 Bacteria 4085
116 Ga0157376_10088150 3300014969 Bacteria 2680
117 Ga0183360_10001 3300015689 Bacteria 3943671
118 Ga0163161_10212730 3300017792 Bacteria 1494
119 Ga0213875_10008062 3300021388 Bacteria 5411
120 Ga0207427_101445 3300025231 Bacteria 8567
121 Ga0209233_1002509 3300025261 Bacteria 6711
122 Ga0209233_1004736 3300025261 Bacteria 4589
123 Ga0209673_1010406 3300025273 Bacteria 3923
124 Ga0209675_1015778 3300025291 Bacteria 2227
125 Ga0209676_1000891 3300025292 Bacteria 38072
126 Ga0209676_1002822 3300025292 Bacteria 11491
127 Ga0209676_1005031 3300025292 Bacteria 7073
128 Ga0209676_1005447 3300025292 Bacteria 6649
129 Ga0209676_1005872 3300025292 Bacteria 6244
130 Ga0209676_1021243 3300025292 Bacteria 2185
131 Ga0209025_1001506 3300025294 Bacteria 29986
132 Ga0209025_1005152 3300025294 Bacteria 10828
133 Ga0209025_1044470 3300025294 Bacteria 1855
134 Ga0209564_1008641 3300025295 Bacteria 4986
135 Ga0209564_1021700 3300025295 Bacteria 2298
136 Ga0209050_1003631 3300025298 Bacteria 11164
137 Ga0209256_1002365 3300025299 Bacteria 15631
138 Ga0209256_1003096 3300025299 Bacteria 12190
139 Ga0209256_1005134 3300025299 Bacteria 7746
140 Ga0209051_1005500 3300025303 Bacteria 7388
141 Ga0209257_1001190 3300025304 Bacteria 32758
142 Ga0209257_1001230 3300025304 Bacteria 31830
143 Ga0209257_1002995 3300025304 Bacteria 15323
144 Ga0209257_1007374 3300025304 Bacteria 6661
145 Ga0207656_10002117 3300025321 Bacteria 6633
146 Ga0207656_10034028 3300025321 Bacteria 2125
147 Ga0207680_10001295 3300025903 Bacteria 11857
148 Ga0207680_10070029 3300025903 Bacteria 2169
149 Ga0207647_10008303 3300025904 Bacteria 7449
150 Ga0207705_10052462 3300025909 Bacteria 2936
151 Ga0207654_10001456 3300025911 Bacteria 12557
152 Ga0207654_10002335 3300025911 Bacteria 9736
153 Ga0207695_10000014 3300025913 Bacteria 812599
154 Ga0207695_10000295 3300025913 Bacteria 123533
155 Ga0207695_10006626 3300025913 Bacteria 14958
156 Ga0207671_10005394 3300025914 Bacteria 11795
157 Ga0207671_10009682 3300025914 Bacteria 8025
158 Ga0207671_10172238 3300025914 Bacteria 1681
159 Ga0207657_10001671 3300025919 Bacteria 23928
160 Ga0207657_10017228 3300025919 Bacteria 6938
161 Ga0207657_10023180 3300025919 Bacteria 5786
162 Ga0207657_10209868 3300025919 Bacteria 1563
163 Ga0207649_10000464 3300025920 Bacteria 29172
164 Ga0207649_10010927 3300025920 Bacteria 4992
165 Ga0207649_10027825 3300025920 Bacteria 3323
166 Ga0207652_10056496 3300025921 Bacteria 3379
167 Ga0207694_10000478 3300025924 Bacteria 36507
168 Ga0207694_10035723 3300025924 Bacteria 3813
169 Ga0207694_10091881 3300025924 Bacteria 2395
170 Ga0207694_10185108 3300025924 Bacteria 1690
171 Ga0207687_10214237 3300025927 Bacteria 1513
172 Ga0207706_10303519 3300025933 Bacteria 1391
173 Ga0207691_10015127 3300025940 Bacteria 7342
174 Ga0207661_10242901 3300025944 Bacteria 1598
175 Ga0207667_10001832 3300025949 Bacteria 26715
176 Ga0207667_10002246 3300025949 Bacteria 24268
177 Ga0207667_10230640 3300025949 Bacteria 1896
178 Ga0207668_10093736 3300025972 Bacteria 2213
179 Ga0207640_10004515 3300025981 Bacteria 7551
180 Ga0207703_10096765 3300026035 Bacteria 2493
181 Ga0207703_10123475 3300026035 Bacteria 2226
182 Ga0207639_10000676 3300026041 Bacteria 23557
183 Ga0207639_10001645 3300026041 Bacteria 15055
184 Ga0207639_10005483 3300026041 Bacteria 8577
185 Ga0207639_10012737 3300026041 Bacteria 5867
186 Ga0207678_10067001 3300026067 Bacteria 3082
187 Ga0207702_10004871 3300026078 Bacteria 11819
188 Ga0207702_10069098 3300026078 Bacteria 3036
189 Ga0207641_10091124 3300026088 Bacteria 2667
190 Ga0207676_10012087 3300026095 Bacteria 6178
191 Ga0207674_10005005 3300026116 Bacteria 15830
192 Ga0207674_10006805 3300026116 Bacteria 13415
193 Ga0207674_10173237 3300026116 Bacteria 2111
194 Ga0207683_10010715 3300026121 Bacteria 7816
195 Ga0207683_10026640 3300026121 Bacteria 4992
196 Ga0207698_10100690 3300026142 Bacteria 2394
197 Ga0207698_10220013 3300026142 Bacteria 1715
198 Ga0209995_1002870 3300027471 Bacteria 2732
199 Ga0209983_1001409 3300027665 Bacteria 5358
200 Ga0268266_10000167 3300028379 Bacteria 120012
201 Ga0268264_10019575 3300028381 Bacteria 5529
202 Ga0265318_10006175 3300028577 Bacteria 5542
203 Ga0265338_10016264 3300028800 Bacteria 8106
204 Ga0265330_10003804 3300031235 Bacteria 7780
205 Ga0265325_10001077 3300031241 Bacteria 19636
206 Ga0265329_10036258 3300031242 Bacteria 1590
207 Ga0265327_10025808 3300031251 Bacteria 3416
208 Ga0265313_10001394 3300031595 Bacteria 22666
209 Ga0265314_10016498 3300031711 Bacteria 5828
210 Ga0265314_10035127 3300031711 Bacteria 3655
211 Ga0265342_10067239 3300031712 Bacteria 2098
212 Ga0307405_10107031 3300031731 Bacteria 1887
213 Ga0307406_10003641 3300031901 Bacteria 8392
214 Ga0307406_10054694 3300031901 Bacteria 2548
215 Ga0307414_10006156 3300032004 Bacteria 6667
216 Ga0373935_0129669 3300035692 Bacteria 1693
217 Ga0373937_0084109 3300036401 Bacteria 2943
218 Ga0373937_0347656 3300036401 Bacteria 1404
219 Ga0373925_0151997 3300037068 Bacteria 1818
220 Ga0395900_0062529 3300037418 Bacteria 3827
221 Ga0395900_0232842 3300037418 Bacteria 1852
222 Ga0395905_0004849 3300037471 Bacteria 13871
223 Ga0395905_0080554 3300037471 Bacteria 3051
224 Ga0436364_0041045 3300037853 Bacteria 1898
225 Ga0436364_0151144 3300037853 Bacteria 4029
226 Ga0436364_0373352 3300037853 Bacteria 11125
227 Ga0395901_0005473 3300038443 Bacteria 12858
228 Ga0436360_0717401 3300039438 Bacteria 1645
229 Ga0436361_0588328 3300039447 Bacteria 3019
230 Ga0439465_0036392 3300041413 Bacteria 1581
231 Ga0451807_0018276 3300041486 Bacteria 1362
232 Ga0439445_0042735 3300042004 Bacteria 1208
233 Ga0466957_0057333 3300044842 Bacteria 2384
234 Ga0495629_0017245 3300046459 Bacteria 5179
235 Ga0495653_0238220 3300046463 Bacteria 1214
236 Ga0495640_0095712 3300046533 Bacteria 1954
237 Ga0495587_0057022 3300046536 Bacteria 2298
238 Ga0495599_0027641 3300046678 Bacteria 3554
239 Ga0495647_0149134 3300046681 Bacteria 1002
240 Ga0495674_0015595 3300047319 Bacteria 7096
241 Ga0495680_0025852 3300047322 Bacteria 4853
242 Ga0496101_0011280 3300048904 Bacteria 5923
243 Ga0496101_0119864 3300048904 Bacteria 1988
244 Ga0496104_0000016 3300048907 Bacteria 335025
245 Ga0496105_0000010 3300048908 Bacteria 309880
246 Ga0496108_0040544 3300048911 Bacteria 3882
247 Ga0496109_0044164 3300048912 Bacteria 4042
248 Ga0496111_0104806 3300048914 Bacteria 2080
249 Ga0496113_0032447 3300048916 Bacteria 3796
250 Ga0496115_0096906 3300048918 Bacteria 2415
251 Ga0496116_0130561 3300048919 Bacteria 1433
252 Ga0496117_0020071 3300048920 Bacteria 5464
253 Ga0496118_0006807 3300048921 Bacteria 12410
254 Ga0496118_0038760 3300048921 Bacteria 3814
255 Ga0496121_0001343 3300048924 Bacteria 42115
256 Ga0496121_0021664 3300048924 Bacteria 6284
257 Ga0496121_0105079 3300048924 Bacteria 2168
258 Ga0496125_0000282 3300048928 Bacteria 101380
259 Ga0496126_0006990 3300048929 Bacteria 12470
260 Ga0501031_0023577 3300049568 Bacteria 4011
261 Ga0501033_0021487 3300049570 Bacteria 4869
262 Ga0501034_0000732 3300049571 Bacteria 49733
263 Ga0501034_0002459 3300049571 Bacteria 22331
264 Ga0501034_0047644 3300049571 Bacteria 4328
265 Ga0501034_0085346 3300049571 Bacteria 3159
266 Ga0501034_0107330 3300049571 Bacteria 2784
267 Ga0501034_0255559 3300049571 Bacteria 1696
268 Ga0501036_0079179 3300049572 Bacteria 2780
269 Ga0501037_0056474 3300049573 Bacteria 2867
270 Ga0501038_0056308 3300049574 Bacteria 3376
271 Ga0501038_0062869 3300049574 Bacteria 3171
272 Ga0501038_0087247 3300049574 Bacteria 2620
273 Ga0501039_0167914 3300049575 Bacteria 1725
274 Ga0501043_0105930 3300049579 Bacteria 2209
275 Ga0501043_0230739 3300049579 Bacteria 1430
276 Ga0501046_0017408 3300049580 Bacteria 5998
277 Ga0501047_0097477 3300049581 Bacteria 2818
278 Ga0501070_0103152 3300049586 Bacteria 2359
279 Ga0501070_0111795 3300049586 Bacteria 2258
280 Ga0501070_0152972 3300049586 Bacteria 1903
281 Ga0501073_0178005 3300049589 Bacteria 1472
282 Ga0501074_0025413 3300049590 Bacteria 4301
283 Ga0501074_0120456 3300049590 Bacteria 1877
284 Ga0501080_0086707 3300049742 Bacteria 2909
285 Ga0501035_0008412 3300049822 Bacteria 9607
286 Ga0501035_0084010 3300049822 Bacteria 2808
287 Ga0501044_0048538 3300049823 Bacteria 4384
288 Ga0501044_0217790 3300049823 Bacteria 1861
289 nmdc:mga03683_12717_c1 3300050489 Bacteria 3081
290 nmdc:mga03n38_9515_c2 3300050490 Bacteria 2592
291 nmdc:mga07m45_23767_c1 3300050496 Bacteria 3352
292 nmdc:mga0qj67_146926_c1 3300050509 Bacteria 1912
293 nmdc:mga08y16_112060_c1 3300050511 Bacteria 2840
294 Ga0500566_0096417 3300053094 Bacteria 1628
295 Ga0500607_015989 3300053121 Bacteria 4314
296 Ga0500573_0004418 3300053140 Bacteria 7410
297 Ga0500604_0001245 3300053151 Bacteria 7095
298 Ga0500634_0000034 3300053161 Bacteria 74144
299 Ga0500636_0000106 3300053177 Bacteria 43073
300 Ga0500637_0005985 3300053178 Bacteria 5944

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046681 Ga0495647_0149134 Ga0495647_0149134_24_977 317
2 3300053094 Ga0500566_0096417 Ga0500566_0096417_665_1618 317
3 3300048914 Ga0496111_0104806 Ga0496111_0104806_431_1420 329
4 3300026142 Ga0207698_10100690 Ga0207698_101006903 333
5 3300049589 Ga0501073_0178005 Ga0501073_0178005_20_1171 334
6 3300044842 Ga0466957_0057333 Ga0466957_0057333_489_1652 335
7 3300013102 Ga0157371_10003499 Ga0157371_1000349910 336
8 3300013307 Ga0157372_10099821 Ga0157372_100998213 336
9 3300025920 Ga0207649_10027825 Ga0207649_100278254 336
10 3300048924 Ga0496121_0105079 Ga0496121_0105079_657_1841 345
11 3300005366 Ga0070659_100157672 Ga0070659_1001576722 347
12 3300005614 Ga0068856_100007929 Ga0068856_10000792910 347
13 3300005616 Ga0068852_100029465 Ga0068852_1000294656 347
14 3300006177 Ga0075362_10003246 Ga0075362_100032465 347
15 3300009551 Ga0105238_10024862 Ga0105238_100248626 347
16 3300013104 Ga0157370_10057663 Ga0157370_100576633 347
17 3300013105 Ga0157369_10027660 Ga0157369_100276605 347
18 3300025949 Ga0207667_10001832 Ga0207667_1000183230 347
19 3300050489 nmdc:mga03683_12717_c1 nmdc:mga03683_12717_c1_1322_2479 347
20 3300005457 Ga0070662_100261228 Ga0070662_1002612281 348
21 3300005543 Ga0070672_100016748 Ga0070672_1000167483 348
22 3300025919 Ga0207657_10209868 Ga0207657_102098682 348
23 3300025933 Ga0207706_10303519 Ga0207706_103035191 348
24 3300039438 Ga0436360_0717401 Ga0436360_0717401_74_1120 348
25 3300003320 rootH2_10078224 rootH2_100782245 352
26 3300042004 Ga0439445_0042735 Ga0439445_0042735_107_1195 352
27 3300046678 Ga0495599_0027641 Ga0495599_0027641_2468_3529 353
28 3300049574 Ga0501038_0062869 Ga0501038_0062869_1570_2736 356
29 3300049580 Ga0501046_0017408 Ga0501046_0017408_404_1570 357
30 3300049586 Ga0501070_0111795 Ga0501070_0111795_193_1356 357
31 3300049590 Ga0501074_0120456 Ga0501074_0120456_476_1642 357
32 3300049822 Ga0501035_0008412 Ga0501035_0008412_2877_4043 357
33 3300041486 Ga0451807_0018276 Ga0451807_0018276_226_1344 362
34 iso_pu_bacteria 2842775625 2842776182 365
35 3300050490 nmdc:mga03n38_9515_c2 nmdc:mga03n38_9515_c2_713_1870 367
36 iso_pu_bacteria 2643221591 2643966835 367
37 3300003320 rootH2_10043426 rootH2_100434263 368
38 3300005339 Ga0070660_100031670 Ga0070660_1000316705 368
39 3300005344 Ga0070661_100021672 Ga0070661_1000216725 368
40 3300005539 Ga0068853_100006680 Ga0068853_10000668011 368
41 3300005539 Ga0068853_100050224 Ga0068853_1000502245 368
42 3300005577 Ga0068857_100021429 Ga0068857_1000214295 368
43 3300005578 Ga0068854_100034069 Ga0068854_1000340694 368
44 3300005614 Ga0068856_100190667 Ga0068856_1001906671 368
45 3300005616 Ga0068852_100021543 Ga0068852_1000215433 368
46 3300005616 Ga0068852_100022759 Ga0068852_1000227595 368
47 3300005834 Ga0068851_10000742 Ga0068851_1000074216 368
48 3300006048 Ga0075363_100014220 Ga0075363_1000142203 368
49 3300006051 Ga0075364_10041802 Ga0075364_100418024 368
50 3300009545 Ga0105237_10000459 Ga0105237_1000045951 368
51 3300009551 Ga0105238_10038247 Ga0105238_100382474 368
52 3300010375 Ga0105239_10002667 Ga0105239_100026677 368
53 3300025321 Ga0207656_10002117 Ga0207656_100021174 368
54 3300025919 Ga0207657_10023180 Ga0207657_100231807 368
55 3300025920 Ga0207649_10010927 Ga0207649_100109276 368
56 3300025924 Ga0207694_10091881 Ga0207694_100918811 368
57 3300025981 Ga0207640_10004515 Ga0207640_100045155 368
58 3300026041 Ga0207639_10005483 Ga0207639_100054836 368
59 3300026078 Ga0207702_10069098 Ga0207702_100690983 368
60 3300026116 Ga0207674_10006805 Ga0207674_100068055 368
61 3300026116 Ga0207674_10173237 Ga0207674_101732372 368
62 3300026142 Ga0207698_10220013 Ga0207698_102200132 368
63 3300028577 Ga0265318_10006175 Ga0265318_100061755 368
64 3300028800 Ga0265338_10016264 Ga0265338_100162643 368
65 3300031235 Ga0265330_10003804 Ga0265330_100038047 368
66 3300031241 Ga0265325_10001077 Ga0265325_1000107717 368
67 3300031242 Ga0265329_10036258 Ga0265329_100362581 368
68 3300031595 Ga0265313_10001394 Ga0265313_100013942 368
69 3300031711 Ga0265314_10016498 Ga0265314_100164986 368
70 3300031711 Ga0265314_10035127 Ga0265314_100351272 368
71 3300031712 Ga0265342_10067239 Ga0265342_100672392 368
72 3300041413 Ga0439465_0036392 Ga0439465_0036392_340_1494 368
73 3300049571 Ga0501034_0002459 Ga0501034_0002459_10937_12070 368
74 3300049571 Ga0501034_0047644 Ga0501034_0047644_2246_3400 368
75 3300049571 Ga0501034_0107330 Ga0501034_0107330_488_1639 368
76 3300049574 Ga0501038_0087247 Ga0501038_0087247_43_1203 368
77 3300049579 Ga0501043_0230739 Ga0501043_0230739_138_1271 368
78 3300049581 Ga0501047_0097477 Ga0501047_0097477_99_1259 368
79 3300049822 Ga0501035_0084010 Ga0501035_0084010_200_1360 368
80 3300050496 nmdc:mga07m45_23767_c1 nmdc:mga07m45_23767_c1_2105_3280 368
81 3300053140 Ga0500573_0004418 Ga0500573_0004418_5685_6830 368
82 iso_pu_bacteria 2643221629 2644169278 368
83 iso_pu_bacteria 2643221662 2644350679 368
84 3300032004 Ga0307414_10006156 Ga0307414_100061564 369
85 3300035692 Ga0373935_0129669 Ga0373935_0129669_46_1161 369
86 3300036401 Ga0373937_0347656 Ga0373937_0347656_88_1203 369
87 3300037068 Ga0373925_0151997 Ga0373925_0151997_36_1151 369
88 3300046463 Ga0495653_0238220 Ga0495653_0238220_51_1166 369
89 3300046533 Ga0495640_0095712 Ga0495640_0095712_759_1874 369
90 3300047319 Ga0495674_0015595 Ga0495674_0015595_64_1179 369
91 3300047322 Ga0495680_0025852 Ga0495680_0025852_3612_4727 369
92 3300049571 Ga0501034_0000732 Ga0501034_0000732_36164_37381 369
93 iso_pu_bacteria 2643221580 2643912707 369
94 iso_pu_bacteria 2643221674 2644413290 369
95 iso_pu_bacteria 2932401849 2932404868 369
96 3300009093 Ga0105240_10002324 Ga0105240_1000232425 370
97 3300009551 Ga0105238_10052480 Ga0105238_100524802 370
98 3300025913 Ga0207695_10006626 Ga0207695_100066265 370
99 3300031251 Ga0265327_10025808 Ga0265327_100258082 370
100 3300048904 Ga0496101_0011280 Ga0496101_0011280_3540_4670 370
101 3300048918 Ga0496115_0096906 Ga0496115_0096906_541_1671 370
102 3300048919 Ga0496116_0130561 Ga0496116_0130561_18_1172 370
103 3300048920 Ga0496117_0020071 Ga0496117_0020071_868_1998 370
104 3300048921 Ga0496118_0006807 Ga0496118_0006807_6490_7620 370
105 3300048924 Ga0496121_0001343 Ga0496121_0001343_12055_13185 370
106 3300048928 Ga0496125_0000282 Ga0496125_0000282_3810_4964 370
107 3300048929 Ga0496126_0006990 Ga0496126_0006990_4786_5916 370
108 3300053151 Ga0500604_0001245 Ga0500604_0001245_4449_5612 370
109 3300053161 Ga0500634_0000034 Ga0500634_0000034_67589_68755 370
110 3300005327 Ga0070658_10062431 Ga0070658_100624312 371
111 3300013296 Ga0157374_10087424 Ga0157374_100874242 371
112 3300037853 Ga0436364_0041045 Ga0436364_0041045_655_1782 371
113 3300005436 Ga0070713_100208274 Ga0070713_1002082742 372
114 3300009094 Ga0111539_10164580 Ga0111539_101645802 372
115 3300039447 Ga0436361_0588328 Ga0436361_0588328_1857_2984 372
116 3300050511 nmdc:mga08y16_112060_c1 nmdc:mga08y16_112060_c1_1266_2393 372
117 iso_pu_bacteria 8003014200 8003014767 372
118 3300003214 JGI25165J46597_1002595 JGI25165J46597_10025953 373
119 3300005339 Ga0070660_100063060 Ga0070660_1000630603 373
120 3300005539 Ga0068853_100001761 Ga0068853_1000017616 373
121 3300009551 Ga0105238_10030741 Ga0105238_100307412 373
122 3300021388 Ga0213875_10008062 Ga0213875_100080625 373
123 3300025231 Ga0207427_101445 Ga0207427_1014453 373
124 3300025261 Ga0209233_1002509 Ga0209233_10025092 373
125 3300025919 Ga0207657_10001671 Ga0207657_100016714 373
126 3300025924 Ga0207694_10185108 Ga0207694_101851082 373
127 3300026041 Ga0207639_10001645 Ga0207639_1000164510 373
128 3300037853 Ga0436364_0151144 Ga0436364_0151144_1276_2406 373
129 3300037853 Ga0436364_0373352 Ga0436364_0373352_6641_7786 373
130 3300049823 Ga0501044_0217790 Ga0501044_0217790_173_1321 373
131 3300025914 Ga0207671_10005394 Ga0207671_1000539412 374
132 3300028379 Ga0268266_10000167 Ga0268266_1000016764 374
133 3300049571 Ga0501034_0085346 Ga0501034_0085346_456_1619 374
134 3300049579 Ga0501043_0105930 Ga0501043_0105930_735_1904 374
135 3300003187 JGI25151J46595_10000253 JGI25151J46595_1000025353 375
136 3300003187 JGI25151J46595_10007715 JGI25151J46595_100077153 375
137 3300003775 Ga0055524_1010572 Ga0055524_10105722 375
138 3300003775 Ga0055524_1027406 Ga0055524_10274063 375
139 3300003781 Ga0055536_1006671 Ga0055536_10066714 375
140 3300003781 Ga0055536_1024947 Ga0055536_10249472 375
141 3300003794 Ga0055531_10004029 Ga0055531_100040293 375
142 3300003794 Ga0055531_10011534 Ga0055531_100115342 375
143 3300003794 Ga0055531_10013677 Ga0055531_100136772 375
144 3300005355 Ga0070671_100077585 Ga0070671_1000775852 375
145 3300006846 Ga0075430_100004786 Ga0075430_10000478611 375
146 3300013100 Ga0157373_10076808 Ga0157373_100768083 375
147 3300015689 Ga0183360_10001 Ga0183360_100012317 375
148 3300025273 Ga0209673_1010406 Ga0209673_10104063 375
149 3300025291 Ga0209675_1015778 Ga0209675_10157782 375
150 3300025292 Ga0209676_1000891 Ga0209676_100089129 375
151 3300025292 Ga0209676_1002822 Ga0209676_10028228 375
152 3300025292 Ga0209676_1005031 Ga0209676_10050312 375
153 3300025292 Ga0209676_1005447 Ga0209676_10054474 375
154 3300025292 Ga0209676_1005872 Ga0209676_10058724 375
155 3300025292 Ga0209676_1021243 Ga0209676_10212432 375
156 3300025294 Ga0209025_1001506 Ga0209025_100150613 375
157 3300025294 Ga0209025_1005152 Ga0209025_10051526 375
158 3300025294 Ga0209025_1044470 Ga0209025_10444702 375
159 3300025295 Ga0209564_1008641 Ga0209564_10086414 375
160 3300025295 Ga0209564_1021700 Ga0209564_10217002 375
161 3300025298 Ga0209050_1003631 Ga0209050_10036319 375
162 3300025299 Ga0209256_1002365 Ga0209256_10023657 375
163 3300025299 Ga0209256_1003096 Ga0209256_10030965 375
164 3300025299 Ga0209256_1005134 Ga0209256_10051342 375
165 3300025303 Ga0209051_1005500 Ga0209051_10055004 375
166 3300025304 Ga0209257_1001190 Ga0209257_100119021 375
167 3300025304 Ga0209257_1001230 Ga0209257_100123023 375
168 3300025304 Ga0209257_1002995 Ga0209257_10029958 375
169 3300025304 Ga0209257_1007374 Ga0209257_10073744 375
170 3300025921 Ga0207652_10056496 Ga0207652_100564962 375
171 3300027471 Ga0209995_1002870 Ga0209995_10028703 375
172 3300027665 Ga0209983_1001409 Ga0209983_10014094 375
173 3300031731 Ga0307405_10107031 Ga0307405_101070312 375
174 3300031901 Ga0307406_10003641 Ga0307406_100036415 375
175 3300031901 Ga0307406_10054694 Ga0307406_100546943 375
176 3300037418 Ga0395900_0062529 Ga0395900_0062529_197_1324 375
177 3300037418 Ga0395900_0232842 Ga0395900_0232842_322_1464 375
178 3300037471 Ga0395905_0004849 Ga0395905_0004849_5387_6514 375
179 3300037471 Ga0395905_0080554 Ga0395905_0080554_1040_2167 375
180 3300038443 Ga0395901_0005473 Ga0395901_0005473_6562_7689 375
181 3300046459 Ga0495629_0017245 Ga0495629_0017245_1750_2901 375
182 3300048904 Ga0496101_0119864 Ga0496101_0119864_413_1540 375
183 3300048911 Ga0496108_0040544 Ga0496108_0040544_2557_3684 375
184 3300048912 Ga0496109_0044164 Ga0496109_0044164_2099_3226 375
185 3300048916 Ga0496113_0032447 Ga0496113_0032447_2099_3226 375
186 3300048924 Ga0496121_0021664 Ga0496121_0021664_16_1164 375
187 3300049568 Ga0501031_0023577 Ga0501031_0023577_755_1900 375
188 3300049570 Ga0501033_0021487 Ga0501033_0021487_2503_3636 375
189 3300049572 Ga0501036_0079179 Ga0501036_0079179_1027_2172 375
190 3300049573 Ga0501037_0056474 Ga0501037_0056474_1664_2809 375
191 3300049574 Ga0501038_0056308 Ga0501038_0056308_2113_3258 375
192 3300049575 Ga0501039_0167914 Ga0501039_0167914_446_1591 375
193 3300049586 Ga0501070_0152972 Ga0501070_0152972_721_1866 375
194 3300049823 Ga0501044_0048538 Ga0501044_0048538_1639_2784 375
195 3300050509 nmdc:mga0qj67_146926_c1 nmdc:mga0qj67_146926_c1_664_1824 375
196 3300053121 Ga0500607_015989 Ga0500607_015989_2129_3256 375
197 3300053177 Ga0500636_0000106 Ga0500636_0000106_23976_25103 375
198 3300053178 Ga0500637_0005985 Ga0500637_0005985_3937_5064 375
199 iso_pu_bacteria 2941489479 2941489621 375
200 iso_pu_bacteria 2995948881 2995950841 375
201 3300002077 JGI24744J21845_10016968 JGI24744J21845_100169682 376
202 3300005329 Ga0070683_100050507 Ga0070683_1000505074 376
203 3300005335 Ga0070666_10002195 Ga0070666_100021954 376
204 3300005344 Ga0070661_100001200 Ga0070661_1000012007 376
205 3300005344 Ga0070661_100223021 Ga0070661_1002230211 376
206 3300005366 Ga0070659_100085777 Ga0070659_1000857773 376
207 3300005367 Ga0070667_100386989 Ga0070667_1003869891 376
208 3300005455 Ga0070663_100016051 Ga0070663_1000160513 376
209 3300005456 Ga0070678_100053151 Ga0070678_1000531512 376
210 3300005539 Ga0068853_100026029 Ga0068853_1000260292 376
211 3300005539 Ga0068853_100067364 Ga0068853_1000673645 376
212 3300005539 Ga0068853_100090637 Ga0068853_1000906373 376
213 3300005543 Ga0070672_100037929 Ga0070672_1000379292 376
214 3300005563 Ga0068855_100002876 Ga0068855_10000287610 376
215 3300005564 Ga0070664_100034059 Ga0070664_1000340592 376
216 3300005577 Ga0068857_100081364 Ga0068857_1000813644 376
217 3300005614 Ga0068856_100004262 Ga0068856_1000042628 376
218 3300005614 Ga0068856_100034261 Ga0068856_1000342613 376
219 3300005616 Ga0068852_100039104 Ga0068852_1000391042 376
220 3300005617 Ga0068859_100013179 Ga0068859_1000131792 376
221 3300005618 Ga0068864_100005410 Ga0068864_1000054108 376
222 3300005834 Ga0068851_10091029 Ga0068851_100910292 376
223 3300005841 Ga0068863_100040174 Ga0068863_1000401745 376
224 3300005841 Ga0068863_100124109 Ga0068863_1001241092 376
225 3300005841 Ga0068863_100314006 Ga0068863_1003140062 376
226 3300005843 Ga0068860_100001143 Ga0068860_10000114319 376
227 3300005843 Ga0068860_100073225 Ga0068860_1000732252 376
228 3300006237 Ga0097621_100092292 Ga0097621_1000922922 376
229 3300006237 Ga0097621_100172272 Ga0097621_1001722722 376
230 3300006358 Ga0068871_100049737 Ga0068871_1000497373 376
231 3300006358 Ga0068871_100081885 Ga0068871_1000818853 376
232 3300006931 Ga0097620_100013179 Ga0097620_1000131792 376
233 3300009093 Ga0105240_10002056 Ga0105240_100020568 376
234 3300009093 Ga0105240_10015221 Ga0105240_100152212 376
235 3300009093 Ga0105240_10042556 Ga0105240_100425562 376
236 3300009098 Ga0105245_10240935 Ga0105245_102409352 376
237 3300009174 Ga0105241_10001947 Ga0105241_100019475 376
238 3300009174 Ga0105241_10009403 Ga0105241_100094036 376
239 3300009176 Ga0105242_10045466 Ga0105242_100454662 376
240 3300009177 Ga0105248_10282402 Ga0105248_102824022 376
241 3300009545 Ga0105237_10034173 Ga0105237_100341735 376
242 3300009545 Ga0105237_10051032 Ga0105237_100510323 376
243 3300009545 Ga0105237_10186278 Ga0105237_101862783 376
244 3300009551 Ga0105238_10000887 Ga0105238_100008878 376
245 3300009551 Ga0105238_10007110 Ga0105238_100071103 376
246 3300009551 Ga0105238_10014143 Ga0105238_100141433 376
247 3300009551 Ga0105238_10331870 Ga0105238_103318702 376
248 3300009553 Ga0105249_10092963 Ga0105249_100929632 376
249 3300010375 Ga0105239_10011120 Ga0105239_100111204 376
250 3300010375 Ga0105239_10016846 Ga0105239_100168465 376
251 3300010375 Ga0105239_10102777 Ga0105239_101027773 376
252 3300010375 Ga0105239_10120578 Ga0105239_101205783 376
253 3300011119 Ga0105246_10039616 Ga0105246_100396161 376
254 3300013100 Ga0157373_10026162 Ga0157373_100261622 376
255 3300013104 Ga0157370_10074670 Ga0157370_100746702 376
256 3300013105 Ga0157369_10004444 Ga0157369_100044447 376
257 3300013105 Ga0157369_10019354 Ga0157369_100193545 376
258 3300013306 Ga0163162_10000016 Ga0163162_10000016100 376
259 3300013306 Ga0163162_10042630 Ga0163162_100426304 376
260 3300013307 Ga0157372_10001477 Ga0157372_1000147720 376
261 3300013307 Ga0157372_10123991 Ga0157372_101239912 376
262 3300013308 Ga0157375_10001733 Ga0157375_1000173312 376
263 3300014325 Ga0163163_10000197 Ga0163163_100001979 376
264 3300014968 Ga0157379_10020524 Ga0157379_100205244 376
265 3300014969 Ga0157376_10034514 Ga0157376_100345144 376
266 3300014969 Ga0157376_10088150 Ga0157376_100881503 376
267 3300017792 Ga0163161_10212730 Ga0163161_102127302 376
268 3300025261 Ga0209233_1004736 Ga0209233_10047362 376
269 3300025321 Ga0207656_10034028 Ga0207656_100340282 376
270 3300025903 Ga0207680_10001295 Ga0207680_100012957 376
271 3300025903 Ga0207680_10070029 Ga0207680_100700292 376
272 3300025904 Ga0207647_10008303 Ga0207647_100083032 376
273 3300025909 Ga0207705_10052462 Ga0207705_100524622 376
274 3300025911 Ga0207654_10001456 Ga0207654_100014565 376
275 3300025911 Ga0207654_10002335 Ga0207654_100023354 376
276 3300025913 Ga0207695_10000014 Ga0207695_10000014555 376
277 3300025913 Ga0207695_10000295 Ga0207695_100002959 376
278 3300025914 Ga0207671_10009682 Ga0207671_100096822 376
279 3300025914 Ga0207671_10172238 Ga0207671_101722382 376
280 3300025919 Ga0207657_10017228 Ga0207657_100172282 376
281 3300025920 Ga0207649_10000464 Ga0207649_100004649 376
282 3300025924 Ga0207694_10000478 Ga0207694_1000047812 376
283 3300025924 Ga0207694_10035723 Ga0207694_100357232 376
284 3300025927 Ga0207687_10214237 Ga0207687_102142372 376
285 3300025940 Ga0207691_10015127 Ga0207691_100151276 376
286 3300025944 Ga0207661_10242901 Ga0207661_102429011 376
287 3300025949 Ga0207667_10002246 Ga0207667_1000224610 376
288 3300025949 Ga0207667_10230640 Ga0207667_102306402 376
289 3300025972 Ga0207668_10093736 Ga0207668_100937361 376
290 3300026035 Ga0207703_10096765 Ga0207703_100967652 376
291 3300026035 Ga0207703_10123475 Ga0207703_101234753 376
292 3300026041 Ga0207639_10000676 Ga0207639_1000067618 376
293 3300026041 Ga0207639_10012737 Ga0207639_100127373 376
294 3300026067 Ga0207678_10067001 Ga0207678_100670013 376
295 3300026078 Ga0207702_10004871 Ga0207702_100048714 376
296 3300026088 Ga0207641_10091124 Ga0207641_100911242 376
297 3300026095 Ga0207676_10012087 Ga0207676_100120872 376
298 3300026116 Ga0207674_10005005 Ga0207674_100050058 376
299 3300026121 Ga0207683_10010715 Ga0207683_100107154 376
300 3300026121 Ga0207683_10026640 Ga0207683_100266403 376
301 3300028381 Ga0268264_10019575 Ga0268264_100195753 376
302 3300036401 Ga0373937_0084109 Ga0373937_0084109_1376_2506 376
303 3300046536 Ga0495587_0057022 Ga0495587_0057022_321_1451 376
304 3300048907 Ga0496104_0000016 Ga0496104_0000016_143087_144217 376
305 3300048908 Ga0496105_0000010 Ga0496105_0000010_67412_68542 376
306 3300048921 Ga0496118_0038760 Ga0496118_0038760_1828_2958 376
307 3300049571 Ga0501034_0255559 Ga0501034_0255559_520_1656 376
308 3300049586 Ga0501070_0103152 Ga0501070_0103152_1066_2202 376
309 3300049590 Ga0501074_0025413 Ga0501074_0025413_447_1583 376
310 3300049742 Ga0501080_0086707 Ga0501080_0086707_689_1825 376

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

200

307

0.93

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

91

399

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lgp-assembly1.cif.gz_A dape enzyme from shigella flexneri 0.9777 1 376
4h2k-assembly2.cif.gz_B crystal structure of the catalytic domain of succinyl-diaminopimelate desuccinylase from haemophilus influenzae 0.9751 3 376
7lgp-assembly1.cif.gz_A dape enzyme from shigella flexneri 0.9751 1 376
4h2k-assembly1.cif.gz_A crystal structure of the catalytic domain of succinyl-diaminopimelate desuccinylase from haemophilus influenzae 0.9746 3 375
4ppz-assembly1.cif.gz_A crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from neisseria meningitidis mc58 0.9726 1 375
ID Description Score Start End Superfamily
af_P0AED7_3_244_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9636 2 245 3.40.630.10
1vgyB01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9607 1 375 3.40.630.10
af_P0AED7_3_244_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9597 2 245 3.40.630.10
1vgyB01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9534 1 375 3.40.630.10
af_Q2FWN8_3_180_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9115 4 166 3.40.630.10
ID Description Score Start End GO Terms
AF-T0Z1T6-F1-model_v4 Diaminopimelate desuccinylase 0.9868 218 375 GO:0006526
GO:0008777
GO:0046872
AF-A0A3S4GHQ2-F1-model_v4 Succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) 0.9811 92 376 GO:0006526
GO:0008777
GO:0009014
GO:0009089
GO:0019877
GO:0046872
AF-A0A7R9AHQ4-F1-model_v4 Succinyl-diaminopimelate desuccinylase (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase) 0.9798 7 363 GO:0003676
GO:0005829
GO:0009014
GO:0009089
GO:0016020
GO:0019877
GO:0032259
GO:0036009
AF-A0A2G6EXK8-F1-model_v4 Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase) 0.9777 1 376 GO:0006526
GO:0008270
GO:0008777
GO:0009014
GO:0009089
GO:0019877
GO:0050897
AF-A0A154UBX6-F1-model_v4 deleted 0.976 1 376

Feature Viewer

pLDDT pTM Quality
95.41 0.89 High
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Predicted Structure (AlphaFold2)

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Map