F400752

General Info

Members Datasets Scaffolds Average Seq Length
310 202 620 575

Family's Representative Sequence

Representative Sequence 3300025911|Ga0207654_10000191|Ga0207654_1000019129
Length 616
Sequence MIELYTSDFRLKTYSLLFPNFKTLKLLCGLFYVNHSKIMAKSVADQLVEILADAGVKRIYAVTGDSLNEVNDAVRRSGKIQWIHVRHEEAGAFAAGAEAQLNGLACCAGSSGPGHVHLINGLYDAHRAGAPVIAIASTCMTTEFGSEFFQETNTIKLFDDCSYYNQIATTPSQLPRMLQAGIQYALNKKGVSVIGLPGDLTKMDAEEINTSVQNWNPVAEIKPSEEDLQQLVALLNQHEKIVMFCGIGAEDAHDEVVKLSQMLNAPVGYSFRGKMSVQYDNPNEVGMTGLLGLPSAFHSMHEAEVLILLGTDFPYTQFMPVDCKIVQIDAKPERIGRRAKVEIGLHGTVKDTINALLPFLNQKTDDNFLQEQLRFYEEVKKQMQTYVDDPGTKGMIHPEFVMSTIDNIAAKDAIFTVDTGMSCVWGARYINATEQRELLGSFNHGSMANAMPQAIGASLACPGRQVVALCGDGGLSMLLGDLATISQYKLPVKVIVFNNRELGMVKLEMEVAGIPDWQTDMFDPDFALVAQAMGIKGITVKDPDNVKQALQEAFLYKGPVLVNLFTDPNALAMPPKVEFEQVKGMALSMTKLVLNGRMDEVVDTVKANYKHLKEVL

Samples

Sample ID Description Type Environment
1 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
30 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
39 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
40 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
43 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
45 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
46 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
50 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
61 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
64 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
65 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
66 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
70 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
71 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
75 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
76 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
82 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
85 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
86 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
87 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
88 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
89 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
90 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
91 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
92 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
93 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
94 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
95 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
96 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
97 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
98 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
99 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
100 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
103 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
106 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
107 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
108 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
109 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
113 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
114 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
115 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
116 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
117 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
118 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
119 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
120 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
121 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
122 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
123 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
124 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
125 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
126 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
127 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
128 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
129 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
130 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
131 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
132 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
133 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
134 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
135 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
136 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
137 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
138 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
139 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
140 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
141 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
142 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
143 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
144 2643221615 Nocardioides sp. Root224 Isolate Unclassified
145 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
146 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
147 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
148 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
149 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
150 2738541302 Pedobacter sp. CF074 Isolate Unclassified
151 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
152 2739367656 Pedobacter sp. CF523 Isolate Unclassified
153 2739367663 Pedobacter sp. YR510 Isolate Unclassified
154 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
155 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
156 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
157 2739367898 Nocardioides sp. CF479 Isolate Unclassified
158 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
159 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
160 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
161 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
162 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
163 2818991437 Pedobacter terrae 518 Isolate Unclassified
164 2818991444 Filimonas endophytica 3197 Isolate Unclassified
165 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
166 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
167 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
168 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
169 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
170 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
171 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
172 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
173 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
174 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
175 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
176 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
177 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
178 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
179 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
180 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
181 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
182 2914759650 Rhizosphaericola mali Isolate Rhizosphere
183 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
184 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
185 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
186 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
187 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
188 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
189 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
190 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
191 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
192 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
193 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
194 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
195 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
196 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
197 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
198 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
199 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
200 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
201 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
202 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.81
Metatranscriptomes 0
Isolates 24.19

Biome Distribution

Category Percentage (%)
Aerial Root 0.65
Bulb 0
Endosphere 7.74
Nodule 0.32
Rhizoplane 1.61
Rhizosphere 68.06
Stem 0
Stem Tuber 0
Unclassified 0.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207654_10000191 3300025911 Bacteria 37892
2 JGI24735J21928_10000001 3300002067 Bacteria 650042
3 JGI25162J39368_1000005 3300002737 Bacteria 435925
4 JGI25162J39368_1000527 3300002737 Bacteria 28507
5 JGI25162J39368_1002213 3300002737 Bacteria 8001
6 JGI25165J46597_1000836 3300003214 Bacteria 22780
7 rootH2_10008990 3300003320 Bacteria 20341
8 rootH2_10035640 3300003320 Bacteria 6681
9 rootH2_10107204 3300003320 Bacteria 2853
10 rootH2_10196319 3300003320 Bacteria 6890
11 rootH1_10034655 3300003323 Bacteria 6884
12 rootH1_10053911 3300003323 Bacteria 2015
13 rootH1_10110420 3300003323 Bacteria 17012
14 Ga0065714_10064582 3300005288 Bacteria 32328
15 Ga0065714_10064659 3300005288 Bacteria 25309
16 Ga0065704_10000850 3300005289 Bacteria 11620
17 Ga0065704_10071146 3300005289 Bacteria 12811
18 Ga0065704_10072928 3300005289 Bacteria 7797
19 Ga0070658_10000099 3300005327 Bacteria 76585
20 Ga0070683_100029805 3300005329 Bacteria 4945
21 Ga0070682_100000369 3300005337 Bacteria 30375
22 Ga0068868_100019806 3300005338 Bacteria 5047
23 Ga0070662_100000013 3300005457 Bacteria 125019
24 Ga0070684_100002061 3300005535 Bacteria 14809
25 Ga0070665_100000450 3300005548 Bacteria 59867
26 Ga0068855_100003097 3300005563 Bacteria 20360
27 Ga0068855_100006710 3300005563 Bacteria 13969
28 Ga0068854_100092912 3300005578 Bacteria 2248
29 Ga0068856_100002703 3300005614 Bacteria 18181
30 Ga0068856_100068232 3300005614 Bacteria 3515
31 Ga0068856_100127036 3300005614 Bacteria 2553
32 Ga0081540_1003888 3300005983 Bacteria 11633
33 Ga0081539_10016858 3300005985 Bacteria 5180
34 Ga0075365_10024366 3300006038 Bacteria 3816
35 Ga0075366_10000247 3300006195 Bacteria 23731
36 Ga0105244_10000003 3300009036 Bacteria 494610
37 Ga0105244_10000013 3300009036 Bacteria 258350
38 Ga0105240_10000128 3300009093 Bacteria 156107
39 Ga0105240_10001477 3300009093 Bacteria 40056
40 Ga0105240_10148764 3300009093 Unclassified 2791
41 Ga0105240_10179994 3300009093 Bacteria 2496
42 Ga0105243_10000004 3300009148 Bacteria 601266
43 Ga0105243_10000085 3300009148 Bacteria 106602
44 Ga0105243_10028892 3300009148 Bacteria 4260
45 Ga0105241_10001015 3300009174 Bacteria 21354
46 Ga0105237_10000886 3300009545 Bacteria 40329
47 Ga0105237_10001172 3300009545 Bacteria 35046
48 Ga0105237_10007203 3300009545 Bacteria 12213
49 Ga0105237_10008218 3300009545 Bacteria 11333
50 Ga0105237_10008779 3300009545 Bacteria 10902
51 Ga0105237_10076018 3300009545 Bacteria 3349
52 Ga0105239_10000011 3300010375 Bacteria 337500
53 Ga0105239_10000045 3300010375 Bacteria 186314
54 Ga0105239_10000655 3300010375 Bacteria 49317
55 Ga0105239_10001249 3300010375 Bacteria 34548
56 Ga0105239_10012919 3300010375 Bacteria 9289
57 Ga0157373_10000012 3300013100 Bacteria 188666
58 Ga0157373_10000065 3300013100 Bacteria 93292
59 Ga0157373_10031346 3300013100 Bacteria 3827
60 Ga0157371_10000016 3300013102 Bacteria 330495
61 Ga0157371_10000037 3300013102 Bacteria 214866
62 Ga0157371_10012513 3300013102 Bacteria 6485
63 Ga0157370_10000350 3300013104 Bacteria 58500
64 Ga0157370_10001606 3300013104 Bacteria 27943
65 Ga0157370_10005033 3300013104 Bacteria 14931
66 Ga0157370_10013995 3300013104 Bacteria 8238
67 Ga0157370_10043494 3300013104 Bacteria 4322
68 Ga0157370_10165674 3300013104 Bacteria 2055
69 Ga0157369_10000129 3300013105 Bacteria 108473
70 Ga0157369_10003158 3300013105 Bacteria 19673
71 Ga0157374_10000258 3300013296 Bacteria 48926
72 Ga0163162_10000358 3300013306 Bacteria 41309
73 Ga0163162_10003223 3300013306 Bacteria 15611
74 Ga0157372_10006254 3300013307 Bacteria 12663
75 Ga0163163_10080729 3300014325 Bacteria 3253
76 Ga0182008_10000005 3300014497 Bacteria 386556
77 Ga0182008_10002885 3300014497 Bacteria 10639
78 Ga0182006_1000001 3300015261 Bacteria 1091090
79 Ga0182006_1001339 3300015261 Bacteria 15086
80 Ga0182006_1003734 3300015261 Bacteria 7692
81 Ga0182007_10000003 3300015262 Bacteria 548244
82 Ga0183373_1001 3300015682 Bacteria 1410374
83 Ga0163161_10000074 3300017792 Bacteria 101784
84 Ga0163161_10009448 3300017792 Bacteria 6749
85 Ga0209436_100457 3300025208 Bacteria 18206
86 Ga0207427_100072 3300025231 Bacteria 158364
87 Ga0209437_100026 3300025233 Bacteria 542698
88 Ga0209437_100043 3300025233 Bacteria 440454
89 Ga0209233_1000111 3300025261 Bacteria 260262
90 Ga0209455_1001631 3300025272 Bacteria 9794
91 Ga0209130_1000510 3300025284 Bacteria 39344
92 Ga0209675_1000034 3300025291 Bacteria 267827
93 Ga0207426_1000024 3300025302 Bacteria 534075
94 Ga0207655_1000010 3300025728 Bacteria 649325
95 Ga0207655_1000031 3300025728 Bacteria 392265
96 Ga0207647_10000044 3300025904 Bacteria 90491
97 Ga0207705_10000142 3300025909 Bacteria 76788
98 Ga0207654_10036120 3300025911 Bacteria 2759
99 Ga0207695_10000179 3300025913 Bacteria 185564
100 Ga0207695_10002745 3300025913 Bacteria 25680
101 Ga0207695_10025813 3300025913 Bacteria 6567
102 Ga0207695_10106247 3300025913 Unclassified 2793
103 Ga0207671_10004130 3300025914 Bacteria 14037
104 Ga0207671_10004525 3300025914 Bacteria 13214
105 Ga0207671_10004937 3300025914 Bacteria 12507
106 Ga0207671_10005101 3300025914 Bacteria 12251
107 Ga0207671_10022184 3300025914 Bacteria 4804
108 Ga0207706_10000173 3300025933 Bacteria 71958
109 Ga0207709_10000010 3300025935 Bacteria 601305
110 Ga0207709_10000044 3300025935 Bacteria 241642
111 Ga0207661_10005929 3300025944 Bacteria 8625
112 Ga0207667_10084446 3300025949 Bacteria 3287
113 Ga0207640_10074795 3300025981 Bacteria 2294
114 Ga0265323_10000284 3300028653 Bacteria 29283
115 Ga0265323_10020619 3300028653 Bacteria 2536
116 Ga0307515_10000820 3300028794 Bacteria 71586
117 Ga0307515_10014012 3300028794 Bacteria 14919
118 Ga0265338_10000989 3300028800 Bacteria 47912
119 Ga0265338_10038478 3300028800 Bacteria 4532
120 Ga0265338_10046824 3300028800 Bacteria 3957
121 Ga0316177_1161604 3300030731 Bacteria 10312
122 Ga0316183_1003610 3300030742 Bacteria 136078
123 Ga0316181_1101691 3300030744 Bacteria 26221
124 Ga0265325_10025410 3300031241 Bacteria 3217
125 Ga0265327_10000055 3300031251 Bacteria 247188
126 Ga0265316_10001969 3300031344 Bacteria 21605
127 Ga0265316_10007044 3300031344 Bacteria 10654
128 Ga0265316_10018819 3300031344 Bacteria 5929
129 Ga0307516_10000862 3300031730 Bacteria 41576
130 Ga0307405_10000003 3300031731 Bacteria 569064
131 Ga0307405_10000008 3300031731 Bacteria 264953
132 Ga0307407_10000037 3300031903 Bacteria 71023
133 Ga0307412_10000006 3300031911 Bacteria 506878
134 Ga0307416_100000048 3300032002 Bacteria 120194
135 Ga0307416_100000553 3300032002 Bacteria 19087
136 Ga0307414_10000722 3300032004 Bacteria 16914
137 Ga0307414_10002061 3300032004 Bacteria 10441
138 Ga0307414_10021230 3300032004 Bacteria 4068
139 Ga0307414_10034637 3300032004 Bacteria 3351
140 Ga0307411_10000005 3300032005 Bacteria 391311
141 Ga0307510_10010379 3300033180 Bacteria 11063
142 Ga0395899_0011226 3300037312 Bacteria 6863
143 Ga0395905_0000779 3300037471 Bacteria 41889
144 Ga0395905_0002666 3300037471 Bacteria 19585
145 Ga0395901_0017117 3300038443 Bacteria 7391
146 Ga0451577_0041262 3300042876 Bacteria 4142
147 Ga0466972_0004400 3300044658 Bacteria 7044
148 Ga0466957_0078000 3300044842 Unclassified 2059
149 Ga0466959_0002225 3300045049 Bacteria 12358
150 Ga0495627_000030 3300046453 Bacteria 228883
151 Ga0495627_008443 3300046453 Bacteria 3862
152 Ga0495629_0019853 3300046459 Bacteria 4796
153 Ga0495650_0000013 3300046471 Bacteria 611135
154 Ga0495585_0004232 3300046492 Bacteria 9360
155 Ga0495585_0007463 3300046492 Bacteria 6689
156 Ga0495596_0000728 3300046500 Bacteria 20262
157 Ga0495606_0000010 3300046507 Bacteria 299893
158 Ga0495606_0000102 3300046507 Bacteria 146051
159 Ga0495606_0005170 3300046507 Bacteria 12622
160 Ga0495606_0007693 3300046507 Bacteria 9551
161 Ga0495606_0010200 3300046507 Bacteria 7831
162 Ga0495606_0022879 3300046507 Bacteria 4541
163 Ga0495606_0043158 3300046507 Bacteria 3010
164 Ga0495610_0000005 3300046512 Bacteria 924111
165 Ga0495610_0000370 3300046512 Bacteria 46662
166 Ga0495610_0000825 3300046512 Bacteria 28988
167 Ga0495616_0003682 3300046513 Bacteria 9787
168 Ga0495648_0026011 3300046524 Bacteria 3949
169 Ga0495648_0036799 3300046524 Bacteria 3152
170 Ga0495663_0000030 3300046525 Bacteria 80154
171 Ga0495654_0000003 3300046530 Bacteria 863485
172 Ga0495609_0000003 3300046538 Bacteria 711547
173 Ga0495609_0008125 3300046538 Bacteria 5166
174 Ga0495622_0026290 3300046557 Bacteria 2719
175 Ga0495633_0000001 3300046558 Bacteria 801972
176 Ga0495633_0002351 3300046558 Bacteria 13401
177 Ga0495668_0000009 3300046616 Bacteria 492623
178 Ga0495625_0000040 3300046660 Bacteria 207320
179 Ga0495625_0000100 3300046660 Bacteria 139983
180 Ga0495625_0002020 3300046660 Bacteria 22846
181 Ga0495625_0003359 3300046660 Bacteria 16082
182 Ga0495625_0006420 3300046660 Bacteria 10472
183 Ga0495625_0050424 3300046660 Bacteria 2987
184 Ga0495661_0000341 3300046665 Bacteria 51001
185 Ga0495658_0006212 3300046683 Bacteria 5869
186 Ga0495649_0000002 3300046694 Bacteria 1093458
187 Ga0495687_000009 3300047443 Bacteria 419317
188 Ga0495687_000875 3300047443 Bacteria 31919
189 Ga0495686_0000039 3300047472 Bacteria 304821
190 Ga0495686_0000243 3300047472 Bacteria 98394
191 Ga0495686_0000724 3300047472 Bacteria 44157
192 Ga0495686_0000913 3300047472 Bacteria 37043
193 Ga0495686_0002676 3300047472 Bacteria 16402
194 Ga0495686_0021798 3300047472 Bacteria 4248
195 Ga0495686_0034595 3300047472 Bacteria 3252
196 Ga0495686_0041969 3300047472 Bacteria 2911
197 Ga0496102_0001991 3300048905 Bacteria 17645
198 Ga0496102_0115431 3300048905 Bacteria 2505
199 Ga0496103_0005055 3300048906 Bacteria 7955
200 Ga0496115_0060613 3300048918 Bacteria 3049
201 Ga0496116_0000068 3300048919 Bacteria 259724
202 Ga0496117_0000062 3300048920 Bacteria 257535
203 Ga0496117_0002945 3300048920 Bacteria 20595
204 Ga0496118_0000578 3300048921 Bacteria 60550
205 Ga0496118_0015262 3300048921 Bacteria 7125
206 Ga0496119_0000024 3300048922 Bacteria 257750
207 Ga0496122_0000171 3300048925 Bacteria 154143
208 Ga0496122_0000282 3300048925 Bacteria 113484
209 Ga0496122_0001051 3300048925 Bacteria 48291
210 Ga0496122_0005437 3300048925 Bacteria 15171
211 Ga0496122_0007497 3300048925 Bacteria 12104
212 Ga0496123_0000745 3300048926 Bacteria 52660
213 Ga0496123_0009640 3300048926 Bacteria 8667
214 Ga0496123_0014662 3300048926 Bacteria 6478
215 Ga0496124_0009618 3300048927 Bacteria 9907
216 Ga0496124_0081155 3300048927 Bacteria 2667
217 Ga0496125_0000185 3300048928 Bacteria 135607
218 Ga0496125_0002157 3300048928 Bacteria 26353
219 Ga0496125_0003638 3300048928 Bacteria 18464
220 Ga0496126_0000495 3300048929 Bacteria 77686
221 Ga0496126_0000586 3300048929 Bacteria 68837
222 Ga0496126_0033650 3300048929 Bacteria 4820
223 Ga0496126_0110002 3300048929 Bacteria 2401
224 Ga0501067_0041944 3300049583 Bacteria 2541
225 Ga0501249_003535 3300049679 Bacteria 3137
226 Ga0501266_000015 3300049763 Bacteria 177219
227 nmdc:mga0yw44_9599_c1 3300050492 Bacteria 4906
228 nmdc:mga0k408_1526_c1 3300050493 Bacteria 6125
229 nmdc:mga0k408_705_c1 3300050493 Bacteria 18278
230 Ga0500641_0000038 3300053096 Bacteria 71059
231 Ga0500618_000027 3300053125 Bacteria 142903
232 Ga0500658_0000008 3300053134 Bacteria 273324
233 Ga0500559_0032455 3300053136 Bacteria 2245
234 Ga0500622_0000786 3300053156 Bacteria 27529
235 Ga0500624_000664 3300053157 Bacteria 8922
236 2511232456 2511231000 Bacteria 4488346
237 2585142085 2582581278 Bacteria 5296881
238 2585158020 2582581281 Bacteria 4487904
239 2585161403 2582581282 Bacteria 4495830
240 2587680147 2585428045 Bacteria 5203023
241 2587747574 2585428060 Bacteria 5304711
242 2587944884 2585428115 Bacteria 4420269
243 2588211884 2585428182 Bacteria 5007281
244 2588216452 2585428183 Bacteria 5166119
245 2588220981 2585428184 Bacteria 4978681
246 2588225427 2585428185 Bacteria 4969476
247 2588232454 2585428187 Bacteria 4629388
248 2588448243 2588253712 Bacteria 5403181
249 2590603874 2588254255 Bacteria 5014294
250 2590609514 2588254257 Bacteria 5436094
251 2599477490 2599185184 Bacteria 6430550
252 2644093679 2643221615 Bacteria 5487866
253 2644323521 2643221657 Bacteria 5490246
254 2644685639 2643221725 Bacteria 5087956
255 2722727718 2721755487 Bacteria 6357185
256 2729201489 2728369107 Bacteria 5082720
257 2738700404 2738541273 Bacteria 4048577
258 2738851878 2738541302 Bacteria 5944758
259 2739254153 2738543014 Bacteria 4048139
260 2739617882 2739367656 Bacteria 5152243
261 2739644172 2739367663 Bacteria 5040914
262 2740003335 2739367857 Bacteria 5433684
263 2740008152 2739367858 Bacteria 5432813
264 2740059794 2739367874 Bacteria 4872888
265 2740169466 2739367898 Bacteria 4367674
266 2753674628 2751185877 Bacteria 4921427
267 2765574974 2765235839 Bacteria 5314748
268 2772604419 2772190705 Bacteria 4666226
269 2802653331 2802428842 Bacteria 4926114
270 2816876259 2816332188 Bacteria 5133218
271 2819546434 2818991437 Bacteria 5805520
272 2819587487 2818991444 Bacteria 6968812
273 2819676915 2818991460 Bacteria 7595395
274 2842084394 2842083920 Bacteria 4857652
275 2842725131 2842722452 Bacteria 6263924
276 2842909543 2842903701 Bacteria 6986368
277 2842914296 2842909656 Bacteria 6185908
278 2848554466 2848551377 Bacteria 3720646
279 2852625377 2852623160 Bacteria 4376875
280 2857619466 2857618242 Bacteria 5635925
281 2857631053 2857627736 Bacteria 5625397
282 2871722019 2871720351 Bacteria 4862476
283 2884796757 2884791551 Bacteria 8511252
284 2884934387 2884933994 Bacteria 4535041
285 2889294467 2889290771 Bacteria 5530962
286 2896319976 2896317667 Bacteria 4606601
287 2904448746 2904445276 Bacteria 5310396
288 2904781596 2904780799 Bacteria 5840761
289 2906002991 2905999023 Bacteria 4591259
290 2914762902 2914759650 Bacteria 4701441
291 2919177694 2919177583 Bacteria 5641607
292 2919401923 2919399522 Bacteria 5164947
293 2919442936 2919437846 Bacteria 6199444
294 2928079404 2928078545 Bacteria 6534839
295 2928148114 2928147474 Bacteria 6512076
296 2929177730 2929177148 Bacteria 7883697
297 2932084005 2932082852 Bacteria 6563563
298 2945925052 2945924605 Bacteria 4296724
299 2945980077 2945977869 Bacteria 7777518
300 2946002058 2945997725 Bacteria 6404843
301 2946014062 2946013367 Bacteria 7766675
302 2946023440 2946019816 Bacteria 4621265
303 2954018951 2954016120 Bacteria 6446024
304 2977235827 2977232053 Bacteria 5485925
305 2977243811 2977243572 Bacteria 4374394
306 2977269360 2977268062 Bacteria 5243061
307 2984573901 2984572630 Bacteria 4186940
308 2984607348 2984606641 Bacteria 4186971
309 2993375361 2993372514 Bacteria 4214139
310 2993482224 2993480792 Bacteria 4022225
311 Ga0207654_10000191
312 JGI24735J21928_10000001
313 JGI25162J39368_1000005
314 JGI25162J39368_1000527
315 JGI25162J39368_1002213
316 JGI25165J46597_1000836
317 rootH2_10008990
318 rootH2_10035640
319 rootH2_10107204
320 rootH2_10196319
321 rootH1_10034655
322 rootH1_10053911
323 rootH1_10110420
324 Ga0065714_10064582
325 Ga0065714_10064659
326 Ga0065704_10000850
327 Ga0065704_10071146
328 Ga0065704_10072928
329 Ga0070658_10000099
330 Ga0070683_100029805
331 Ga0070682_100000369
332 Ga0068868_100019806
333 Ga0070662_100000013
334 Ga0070684_100002061
335 Ga0070665_100000450
336 Ga0068855_100003097
337 Ga0068855_100006710
338 Ga0068854_100092912
339 Ga0068856_100002703
340 Ga0068856_100068232
341 Ga0068856_100127036
342 Ga0081540_1003888
343 Ga0081539_10016858
344 Ga0075365_10024366
345 Ga0075366_10000247
346 Ga0105244_10000003
347 Ga0105244_10000013
348 Ga0105240_10000128
349 Ga0105240_10001477
350 Ga0105240_10148764
351 Ga0105240_10179994
352 Ga0105243_10000004
353 Ga0105243_10000085
354 Ga0105243_10028892
355 Ga0105241_10001015
356 Ga0105237_10000886
357 Ga0105237_10001172
358 Ga0105237_10007203
359 Ga0105237_10008218
360 Ga0105237_10008779
361 Ga0105237_10076018
362 Ga0105239_10000011
363 Ga0105239_10000045
364 Ga0105239_10000655
365 Ga0105239_10001249
366 Ga0105239_10012919
367 Ga0157373_10000012
368 Ga0157373_10000065
369 Ga0157373_10031346
370 Ga0157371_10000016
371 Ga0157371_10000037
372 Ga0157371_10012513
373 Ga0157370_10000350
374 Ga0157370_10001606
375 Ga0157370_10005033
376 Ga0157370_10013995
377 Ga0157370_10043494
378 Ga0157370_10165674
379 Ga0157369_10000129
380 Ga0157369_10003158
381 Ga0157374_10000258
382 Ga0163162_10000358
383 Ga0163162_10003223
384 Ga0157372_10006254
385 Ga0163163_10080729
386 Ga0182008_10000005
387 Ga0182008_10002885
388 Ga0182006_1000001
389 Ga0182006_1001339
390 Ga0182006_1003734
391 Ga0182007_10000003
392 Ga0183373_1001
393 Ga0163161_10000074
394 Ga0163161_10009448
395 Ga0209436_100457
396 Ga0207427_100072
397 Ga0209437_100026
398 Ga0209437_100043
399 Ga0209233_1000111
400 Ga0209455_1001631
401 Ga0209130_1000510
402 Ga0209675_1000034
403 Ga0207426_1000024
404 Ga0207655_1000010
405 Ga0207655_1000031
406 Ga0207647_10000044
407 Ga0207705_10000142
408 Ga0207654_10036120
409 Ga0207695_10000179
410 Ga0207695_10002745
411 Ga0207695_10025813
412 Ga0207695_10106247
413 Ga0207671_10004130
414 Ga0207671_10004525
415 Ga0207671_10004937
416 Ga0207671_10005101
417 Ga0207671_10022184
418 Ga0207706_10000173
419 Ga0207709_10000010
420 Ga0207709_10000044
421 Ga0207661_10005929
422 Ga0207667_10084446
423 Ga0207640_10074795
424 Ga0265323_10000284
425 Ga0265323_10020619
426 Ga0307515_10000820
427 Ga0307515_10014012
428 Ga0265338_10000989
429 Ga0265338_10038478
430 Ga0265338_10046824
431 Ga0316177_1161604
432 Ga0316183_1003610
433 Ga0316181_1101691
434 Ga0265325_10025410
435 Ga0265327_10000055
436 Ga0265316_10001969
437 Ga0265316_10007044
438 Ga0265316_10018819
439 Ga0307516_10000862
440 Ga0307405_10000003
441 Ga0307405_10000008
442 Ga0307407_10000037
443 Ga0307412_10000006
444 Ga0307416_100000048
445 Ga0307416_100000553
446 Ga0307414_10000722
447 Ga0307414_10002061
448 Ga0307414_10021230
449 Ga0307414_10034637
450 Ga0307411_10000005
451 Ga0307510_10010379
452 Ga0395899_0011226
453 Ga0395905_0000779
454 Ga0395905_0002666
455 Ga0395901_0017117
456 Ga0451577_0041262
457 Ga0466972_0004400
458 Ga0466957_0078000
459 Ga0466959_0002225
460 Ga0495627_000030
461 Ga0495627_008443
462 Ga0495629_0019853
463 Ga0495650_0000013
464 Ga0495585_0004232
465 Ga0495585_0007463
466 Ga0495596_0000728
467 Ga0495606_0000010
468 Ga0495606_0000102
469 Ga0495606_0005170
470 Ga0495606_0007693
471 Ga0495606_0010200
472 Ga0495606_0022879
473 Ga0495606_0043158
474 Ga0495610_0000005
475 Ga0495610_0000370
476 Ga0495610_0000825
477 Ga0495616_0003682
478 Ga0495648_0026011
479 Ga0495648_0036799
480 Ga0495663_0000030
481 Ga0495654_0000003
482 Ga0495609_0000003
483 Ga0495609_0008125
484 Ga0495622_0026290
485 Ga0495633_0000001
486 Ga0495633_0002351
487 Ga0495668_0000009
488 Ga0495625_0000040
489 Ga0495625_0000100
490 Ga0495625_0002020
491 Ga0495625_0003359
492 Ga0495625_0006420
493 Ga0495625_0050424
494 Ga0495661_0000341
495 Ga0495658_0006212
496 Ga0495649_0000002
497 Ga0495687_000009
498 Ga0495687_000875
499 Ga0495686_0000039
500 Ga0495686_0000243
501 Ga0495686_0000724
502 Ga0495686_0000913
503 Ga0495686_0002676
504 Ga0495686_0021798
505 Ga0495686_0034595
506 Ga0495686_0041969
507 Ga0496102_0001991
508 Ga0496102_0115431
509 Ga0496103_0005055
510 Ga0496115_0060613
511 Ga0496116_0000068
512 Ga0496117_0000062
513 Ga0496117_0002945
514 Ga0496118_0000578
515 Ga0496118_0015262
516 Ga0496119_0000024
517 Ga0496122_0000171
518 Ga0496122_0000282
519 Ga0496122_0001051
520 Ga0496122_0005437
521 Ga0496122_0007497
522 Ga0496123_0000745
523 Ga0496123_0009640
524 Ga0496123_0014662
525 Ga0496124_0009618
526 Ga0496124_0081155
527 Ga0496125_0000185
528 Ga0496125_0002157
529 Ga0496125_0003638
530 Ga0496126_0000495
531 Ga0496126_0000586
532 Ga0496126_0033650
533 Ga0496126_0110002
534 Ga0501067_0041944
535 Ga0501249_003535
536 Ga0501266_000015
537 nmdc:mga0yw44_9599_c1
538 nmdc:mga0k408_1526_c1
539 nmdc:mga0k408_705_c1
540 Ga0500641_0000038
541 Ga0500618_000027
542 Ga0500658_0000008
543 Ga0500559_0032455
544 Ga0500622_0000786
545 Ga0500624_000664
546 2511232456
547 2585142085
548 2585158020
549 2585161403
550 2587680147
551 2587747574
552 2587944884
553 2588211884
554 2588216452
555 2588220981
556 2588225427
557 2588232454
558 2588448243
559 2590603874
560 2590609514
561 2599477490
562 2644093679
563 2644323521
564 2644685639
565 2722727718
566 2729201489
567 2738700404
568 2738851878
569 2739254153
570 2739617882
571 2739644172
572 2740003335
573 2740008152
574 2740059794
575 2740169466
576 2753674628
577 2765574974
578 2772604419
579 2802653331
580 2816876259
581 2819546434
582 2819587487
583 2819676915
584 2842084394
585 2842725131
586 2842909543
587 2842914296
588 2848554466
589 2852625377
590 2857619466
591 2857631053
592 2871722019
593 2884796757
594 2884934387
595 2889294467
596 2896319976
597 2904448746
598 2904781596
599 2906002991
600 2914762902
601 2919177694
602 2919401923
603 2919442936
604 2928079404
605 2928148114
606 2929177730
607 2932084005
608 2945925052
609 2945980077
610 2946002058
611 2946014062
612 2946023440
613 2954018951
614 2977235827
615 2977243811
616 2977269360
617 2984573901
618 2984607348
619 2993375361
620 2993482224

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00205

TPP_enzyme_M

Thiamine pyrophosphate enzyme, central domain

228

356

0.98

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

418

564

0.96

PF02776

TPP_enzyme_N

Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

41

157

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3eya-assembly2.cif.gz_G structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.965 1 530
3eya-assembly1.cif.gz_A structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9639 1 526
3eya-assembly3.cif.gz_K structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9637 1 530
3eya-assembly1.cif.gz_B structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9625 1 536
3eya-assembly1.cif.gz_B structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9607 1 536
ID Description Score Start End Superfamily
3ey9A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9788 179 342 3.40.50.1220
3ey9A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9558 179 342 3.40.50.1220
af_Q7XDB0_20_102_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9519 3 69 3.40.50.970
3eyaH03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9476 335 537 3.40.50.970
af_Q2FV86_349_571_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9433 350 559 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A519YRQ5-F1-model_v4 Ubiquinone-dependent pyruvate dehydrogenase 0.9787 211 570 GO:0000287
GO:0003824
GO:0030976
AF-A0A519WBT4-F1-model_v4 Ubiquinone-dependent pyruvate dehydrogenase 0.9779 49 528 GO:0000287
GO:0003824
GO:0030976
AF-A0A519WBT4-F1-model_v4 Ubiquinone-dependent pyruvate dehydrogenase 0.9759 49 528 GO:0000287
GO:0003824
GO:0030976
AF-A0A251Z018-F1-model_v4 deleted 0.9727 1 573
AF-A0A0C1WU81-F1-model_v4 deleted 0.9716 4 575

Map