F400709

General Info

Members Datasets Scaffolds Average Seq Length
310 242 620 481

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10051223|Ga0105248_100512234
Length 524
Sequence MPSRRERSDAQAEEDVMKGGNDLSVGRRGILLGGATLVAASTLAAGAPSGAHAQASSLNPQPLPPSPNWARALPPGPDTSVKITEAFAALIARDAYFWAWPLVNIYNKRLNFKDVPEPMMVGPGPAAPLNRLAMLTDYIEPEERLVACPNQDVVYGAGALALDLSPVVVQVPDFGDRFWVYQMVDLRTDGFIQLGKMYGTTPGFYLLIGPNWRGGIPKGITKVFRSTTNTGFVGPRVFQDDTPEDKKAIQNVLQWITMYPLAEYDGRLKSTDWSKIRKVPMAAAGEAESKWVFPDKFFDQLPDILADAPALPGEESRYAQMRALLEAIKSNPSLKQPLIEAVTEVEEQIVKPLFEFRNWGQQLPHHWSTISNEAAFGTDYFTRTAVAKSNILVNSPNETKYFYQDLDASGARLNGANRYIVTFAKDQTPPVNGFWSLTLYNEHHFFAPNEIKRYSTGTKNKALKQNPDGSLTIYVQADAPPTAQRDNWLPAPKGGDFSLFGRAYWPKTPVVDGAWTPPPVQKVG

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
4 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
56 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
57 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
77 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
78 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
79 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
80 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
82 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
116 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
121 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
124 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
125 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
126 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
127 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
128 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
129 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
130 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
131 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
132 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
133 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
134 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
135 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
136 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
137 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
138 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
139 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
140 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
141 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
142 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
145 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
146 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
147 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
148 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
149 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
156 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
157 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
158 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
159 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
162 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
163 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
164 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
165 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
168 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
169 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
170 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
171 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
172 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
173 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
182 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
183 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
184 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
185 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
186 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
189 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
190 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
191 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
192 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
193 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
194 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
195 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
196 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
197 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
198 2511231006 Pseudomonas sp. GM17 Isolate Nodule
199 2511231011 Pseudomonas sp. GM30 Isolate Nodule
200 2511231012 Pseudomonas sp. GM33 Isolate Nodule
201 2511231015 Pseudomonas sp. GM49 Isolate Nodule
202 2511231021 Pseudomonas sp. GM78 Isolate Nodule
203 2511231023 Pseudomonas sp. GM80 Isolate Nodule
204 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
205 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
206 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
207 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
208 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
209 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
210 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
211 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
212 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
213 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
214 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
215 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
216 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
217 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
218 2643221733 Bosea sp. Root381 Isolate Unclassified
219 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
220 2773857673 Pseudomonas sp. 443 Isolate Unclassified
221 2784132063 Pseudomonas sp. 424 Isolate Unclassified
222 2802429637 Rhizobium anhuiense C15 Isolate Nodule
223 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
224 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
225 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
226 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
227 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
228 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
229 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
230 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
231 2852657418 Pseudomonas sp. JAI115 Isolate Rhizosphere
232 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
233 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
234 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
235 2904518522 Pseudomonas fluorescens 4488 Isolate Rhizosphere
236 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
237 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
238 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
239 641522639 Methylobacterium sp. 4-46 Isolate Nodule
240 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
241 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
242 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.16
Metatranscriptomes 0.32
Isolates 14.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.42
Nodule 5.16
Rhizoplane 16.77
Rhizosphere 60
Stem 0
Stem Tuber 0
Unclassified 0.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10051223 3300009177 Bacteria 4633
2 JGI25162J39368_1000030 3300002737 Bacteria 218717
3 JGI25163J39215_1000059 3300002771 Bacteria 49468
4 JGI25164J39214_1000123 3300002772 Bacteria 74810
5 JGI25151J46595_10001002 3300003187 Bacteria 21356
6 JGI25151J46595_10002272 3300003187 Bacteria 11798
7 JGI25165J46597_1000056 3300003214 Bacteria 218721
8 JGI25153J46596_10001332 3300003215 Bacteria 14766
9 rootL2_10170946 3300003322 Bacteria 3734
10 Ga0055530_10023153 3300003791 Bacteria 1791
11 Ga0070676_10048691 3300005328 Bacteria 2478
12 Ga0070666_10017204 3300005335 Bacteria 4634
13 Ga0070680_100011217 3300005336 Bacteria 6932
14 Ga0070682_100045804 3300005337 Bacteria 2713
15 Ga0068868_100140733 3300005338 Bacteria 1980
16 Ga0070660_100016775 3300005339 Bacteria 5326
17 Ga0070689_100001613 3300005340 Bacteria 14397
18 Ga0070668_100009505 3300005347 Bacteria 7213
19 Ga0070668_100190735 3300005347 Bacteria 1678
20 Ga0070669_100086339 3300005353 Bacteria 2344
21 Ga0070688_100000632 3300005365 Bacteria 17541
22 Ga0070659_100020854 3300005366 Unclassified 4983
23 Ga0070659_100031314 3300005366 Bacteria 4119
24 Ga0070714_100029055 3300005435 Bacteria 4593
25 Ga0070713_100048934 3300005436 Bacteria 3484
26 Ga0070710_10029310 3300005437 Bacteria 2952
27 Ga0070711_100026516 3300005439 Bacteria 3797
28 Ga0070700_100079852 3300005441 Bacteria 2109
29 Ga0070694_100030567 3300005444 Bacteria 3525
30 Ga0070678_100029003 3300005456 Bacteria 3784
31 Ga0070662_100087195 3300005457 Bacteria 2336
32 Ga0070681_10004260 3300005458 Bacteria 13564
33 Ga0070681_10053505 3300005458 Bacteria 4023
34 Ga0070679_100014445 3300005530 Bacteria 7583
35 Ga0070679_100062268 3300005530 Bacteria 3719
36 Ga0068853_100067763 3300005539 Bacteria 3101
37 Ga0070695_100119303 3300005545 Bacteria 1802
38 Ga0070704_100059958 3300005549 Bacteria 2717
39 Ga0070664_100246640 3300005564 Bacteria 1604
40 Ga0068856_100074458 3300005614 Bacteria 3362
41 Ga0068866_10039399 3300005718 Bacteria 2333
42 Ga0068870_10012814 3300005840 Bacteria 3925
43 Ga0068858_100051776 3300005842 Bacteria 3799
44 Ga0068860_100185141 3300005843 Bacteria 2013
45 Ga0081455_10067081 3300005937 Bacteria 2991
46 Ga0081540_1006676 3300005983 Bacteria 8349
47 Ga0081540_1019185 3300005983 Bacteria 4167
48 Ga0070717_10002633 3300006028 Bacteria 12639
49 Ga0070715_10021901 3300006163 Bacteria 2485
50 Ga0070716_100001521 3300006173 Bacteria 10382
51 Ga0070716_100087830 3300006173 Bacteria 1874
52 Ga0075367_10049592 3300006178 Unclassified 2475
53 Ga0097621_100029999 3300006237 Bacteria 4301
54 Ga0068871_100057273 3300006358 Bacteria 3170
55 Ga0068871_100064471 3300006358 Bacteria 3000
56 Ga0075428_100001874 3300006844 Bacteria 22552
57 Ga0075430_100027565 3300006846 Bacteria 4826
58 Ga0075431_100001409 3300006847 Bacteria 22063
59 Ga0075433_10108531 3300006852 Bacteria 2462
60 Ga0075434_100016716 3300006871 Bacteria 7058
61 Ga0075436_100071276 3300006914 Bacteria 2403
62 Ga0075436_100120861 3300006914 Bacteria 1832
63 Ga0075435_100083394 3300007076 Bacteria 2628
64 Ga0105251_10004184 3300009011 Bacteria 9993
65 Ga0105244_10000002 3300009036 Bacteria 495554
66 Ga0105244_10000542 3300009036 Bacteria 33662
67 Ga0105244_10034967 3300009036 Bacteria 2642
68 Ga0105250_10000399 3300009092 Bacteria 32123
69 Ga0111539_10006365 3300009094 Bacteria 15228
70 Ga0111539_10228851 3300009094 Bacteria 2165
71 Ga0111539_10278426 3300009094 Bacteria 1947
72 Ga0114129_10000245 3300009147 Bacteria 61080
73 Ga0105243_10002701 3300009148 Bacteria 14742
74 Ga0105237_10024131 3300009545 Bacteria 6222
75 Ga0105238_10069682 3300009551 Bacteria 3517
76 Ga0105249_10063037 3300009553 Bacteria 3405
77 Ga0105246_10044597 3300011119 Bacteria 3015
78 Ga0157371_10000198 3300013102 Bacteria 88364
79 Ga0157369_10035884 3300013105 Bacteria 5435
80 Ga0157374_10079536 3300013296 Bacteria 3107
81 Ga0157378_10081501 3300013297 Bacteria 2925
82 Ga0157375_10016554 3300013308 Bacteria 6628
83 Ga0157375_10207443 3300013308 Bacteria 2116
84 Ga0157376_10002042 3300014969 Bacteria 13545
85 Ga0182005_1002537 3300015265 Bacteria 6482
86 Ga0163161_10003426 3300017792 Bacteria 11116
87 Ga0163161_10125662 3300017792 Bacteria 1931
88 Ga0206349_1881891 3300020075 Bacteria 3325
89 Ga0209760_100016 3300025207 Bacteria 173755
90 Ga0207427_100022 3300025231 Bacteria 469701
91 Ga0209437_100002 3300025233 Bacteria 1574801
92 Ga0207425_1003962 3300025245 Bacteria 4560
93 Ga0209129_1000506 3300025258 Bacteria 28097
94 Ga0209233_1000004 3300025261 Bacteria 1574798
95 Ga0209025_1000097 3300025294 Bacteria 236632
96 Ga0209758_1000714 3300025297 Bacteria 49025
97 Ga0209050_1000229 3300025298 Bacteria 123110
98 Ga0207656_10011948 3300025321 Bacteria 3293
99 Ga0207696_1000002 3300025711 Bacteria 1098043
100 Ga0207696_1005437 3300025711 Bacteria 5290
101 Ga0207655_1000012 3300025728 Bacteria 640488
102 Ga0207655_1000216 3300025728 Bacteria 99551
103 Ga0207655_1014676 3300025728 Bacteria 4409
104 Ga0207713_1003160 3300025735 Bacteria 11410
105 Ga0207713_1008919 3300025735 Bacteria 5709
106 Ga0207713_1013613 3300025735 Bacteria 4276
107 Ga0207692_10000597 3300025898 Bacteria 12800
108 Ga0207685_10002398 3300025905 Bacteria 4284
109 Ga0207707_10023640 3300025912 Bacteria 5374
110 Ga0207660_10059975 3300025917 Bacteria 2733
111 Ga0207657_10017456 3300025919 Bacteria 6878
112 Ga0207649_10009899 3300025920 Bacteria 5225
113 Ga0207652_10039247 3300025921 Bacteria 4018
114 Ga0207694_10050280 3300025924 Bacteria 3228
115 Ga0207687_10034717 3300025927 Bacteria 3426
116 Ga0207700_10016861 3300025928 Bacteria 4864
117 Ga0207700_10021240 3300025928 Bacteria 4429
118 Ga0207664_10093550 3300025929 Bacteria 2469
119 Ga0207690_10037106 3300025932 Bacteria 3162
120 Ga0207690_10040875 3300025932 Bacteria 3035
121 Ga0207706_10113318 3300025933 Bacteria 2386
122 Ga0207709_10001741 3300025935 Bacteria 14645
123 Ga0207709_10041176 3300025935 Bacteria 2771
124 Ga0207670_10000111 3300025936 Bacteria 54695
125 Ga0207665_10003014 3300025939 Bacteria 11306
126 Ga0207711_10021318 3300025941 Bacteria 5414
127 Ga0207679_10004000 3300025945 Bacteria 9159
128 Ga0207679_10096216 3300025945 Bacteria 2303
129 Ga0207667_10093355 3300025949 Bacteria 3108
130 Ga0207712_10057697 3300025961 Bacteria 2740
131 Ga0207658_10052013 3300025986 Bacteria 3021
132 Ga0207703_10035168 3300026035 Bacteria 3980
133 Ga0207678_10000193 3300026067 Bacteria 52686
134 Ga0207678_10017092 3300026067 Bacteria 6370
135 Ga0207678_10084965 3300026067 Bacteria 2706
136 Ga0207683_10001712 3300026121 Bacteria 19628
137 Ga0207428_10013821 3300027907 Bacteria 7033
138 Ga0207428_10098262 3300027907 Bacteria 2266
139 Ga0268266_10027147 3300028379 Bacteria 4870
140 Ga0268264_10142883 3300028381 Bacteria 2136
141 Ga0265327_10000996 3300031251 Bacteria 40208
142 Ga0307509_10082887 3300031507 Bacteria 3307
143 Ga0307413_10001840 3300031824 Bacteria 8348
144 Ga0307406_10000003 3300031901 Bacteria 251998
145 Ga0307416_100057604 3300032002 Bacteria 3145
146 Ga0307414_10000001 3300032004 Bacteria 1352954
147 Ga0307411_10000001 3300032005 Bacteria 931810
148 Ga0307510_10062123 3300033180 Bacteria 3820
149 Ga0395905_0000048 3300037471 Bacteria 236537
150 Ga0439466_0020203 3300041411 Bacteria 2376
151 Ga0439452_000110 3300042010 Bacteria 66390
152 Ga0439452_000908 3300042010 Bacteria 13513
153 Ga0439456_001650 3300042013 Bacteria 4505
154 Ga0439460_0003667 3300042461 Bacteria 3724
155 Ga0495638_0000129 3300046460 Bacteria 123549
156 Ga0495638_0004314 3300046460 Bacteria 10790
157 Ga0495584_0000083 3300046491 Bacteria 66118
158 Ga0495584_0041317 3300046491 Bacteria 2328
159 Ga0495585_0000509 3300046492 Bacteria 36748
160 Ga0495583_0003476 3300046506 Bacteria 11958
161 Ga0495610_0009733 3300046512 Bacteria 6043
162 Ga0495616_0026683 3300046513 Bacteria 3070
163 Ga0495632_0000810 3300046519 Bacteria 27713
164 Ga0495632_0017251 3300046519 Bacteria 3991
165 Ga0495643_0000089 3300046522 Bacteria 154903
166 Ga0495644_0000024 3300046523 Bacteria 76102
167 Ga0495654_0030503 3300046530 Bacteria 2742
168 Ga0495654_0053030 3300046530 Bacteria 1972
169 Ga0495597_0048569 3300046542 Bacteria 1877
170 Ga0495611_0001487 3300046648 Bacteria 11647
171 Ga0495625_0102764 3300046660 Bacteria 1961
172 Ga0495669_0006601 3300046684 Bacteria 4852
173 Ga0495649_0000152 3300046694 Bacteria 60670
174 Ga0495660_0003813 3300046810 Bacteria 9231
175 Ga0495660_0047982 3300046810 Bacteria 2336
176 Ga0495680_0019054 3300047322 Bacteria 5808
177 Ga0495673_0001261 3300047469 Bacteria 20843
178 Ga0495681_0003889 3300047470 Bacteria 10304
179 Ga0495686_0000599 3300047472 Bacteria 50255
180 Ga0495602_0084093 3300048088 Bacteria 2663
181 Ga0496100_0011644 3300048903 Bacteria 5013
182 Ga0496100_0028430 3300048903 Bacteria 3448
183 Ga0496101_0010824 3300048904 Bacteria 6033
184 Ga0496101_0030674 3300048904 Bacteria 3772
185 Ga0496101_0084656 3300048904 Bacteria 2349
186 Ga0496102_0008365 3300048905 Bacteria 8860
187 Ga0496102_0017271 3300048905 Bacteria 6320
188 Ga0496102_0058726 3300048905 Bacteria 3516
189 Ga0496103_0005571 3300048906 Bacteria 7531
190 Ga0496104_0010662 3300048907 Bacteria 8213
191 Ga0496104_0015785 3300048907 Bacteria 6851
192 Ga0496104_0090496 3300048907 Bacteria 2924
193 Ga0496105_0014761 3300048908 Bacteria 6218
194 Ga0496106_0000778 3300048909 Bacteria 23018
195 Ga0496106_0006297 3300048909 Bacteria 8787
196 Ga0496106_0006588 3300048909 Bacteria 8600
197 Ga0496106_0006811 3300048909 Bacteria 8457
198 Ga0496106_0008666 3300048909 Bacteria 7526
199 Ga0496107_0006061 3300048910 Bacteria 8297
200 Ga0496107_0070518 3300048910 Bacteria 2537
201 Ga0496108_0000205 3300048911 Bacteria 54470
202 Ga0496108_0185384 3300048911 Bacteria 1802
203 Ga0496109_0002235 3300048912 Bacteria 16068
204 Ga0496110_0010147 3300048913 Bacteria 7651
205 Ga0496110_0161458 3300048913 Bacteria 2031
206 Ga0496111_0025129 3300048914 Bacteria 4201
207 Ga0496112_0062706 3300048915 Bacteria 3667
208 Ga0496112_0115665 3300048915 Bacteria 2652
209 Ga0496112_0173913 3300048915 Bacteria 2118
210 Ga0496112_0299438 3300048915 Bacteria 1554
211 Ga0496114_0003054 3300048917 Bacteria 12817
212 Ga0496114_0033733 3300048917 Bacteria 4220
213 Ga0496115_0002231 3300048918 Bacteria 13894
214 Ga0496115_0012747 3300048918 Bacteria 6337
215 Ga0496115_0035098 3300048918 Bacteria 3966
216 Ga0496115_0042709 3300048918 Bacteria 3613
217 Ga0496115_0134826 3300048918 Bacteria 2036
218 Ga0496116_0000771 3300048919 Bacteria 40668
219 Ga0496117_0000961 3300048920 Bacteria 44128
220 Ga0496117_0080841 3300048920 Bacteria 2135
221 Ga0496118_0001929 3300048921 Bacteria 29390
222 Ga0496118_0035407 3300048921 Bacteria 4053
223 Ga0496121_0000050 3300048924 Bacteria 318295
224 Ga0496121_0001327 3300048924 Bacteria 42375
225 Ga0496122_0001326 3300048925 Bacteria 40561
226 Ga0496123_0000445 3300048926 Bacteria 74126
227 Ga0496123_0054849 3300048926 Bacteria 2619
228 Ga0496123_0084637 3300048926 Bacteria 1911
229 Ga0496124_0002917 3300048927 Bacteria 21559
230 Ga0496124_0004545 3300048927 Bacteria 16148
231 Ga0496124_0007838 3300048927 Bacteria 11266
232 Ga0496124_0022245 3300048927 Bacteria 5818
233 Ga0496125_0001321 3300048928 Bacteria 36629
234 Ga0496126_0002612 3300048929 Bacteria 24000
235 Ga0496126_0020818 3300048929 Bacteria 6419
236 Ga0496126_0022574 3300048929 Bacteria 6118
237 Ga0496126_0022745 3300048929 Bacteria 6089
238 Ga0495678_002650 3300049459 Bacteria 11881
239 Ga0501031_0040074 3300049568 Bacteria 3058
240 Ga0501033_0002321 3300049570 Bacteria 16226
241 Ga0501036_0018933 3300049572 Bacteria 5776
242 Ga0501037_0058564 3300049573 Bacteria 2810
243 Ga0501038_0019123 3300049574 Bacteria 6177
244 Ga0501039_0005333 3300049575 Bacteria 9722
245 Ga0501039_0052344 3300049575 Bacteria 3159
246 Ga0501043_0016142 3300049579 Bacteria 5856
247 Ga0501046_0022972 3300049580 Bacteria 5134
248 Ga0501238_000144 3300049671 Bacteria 10932
249 Ga0501249_001045 3300049679 Bacteria 5902
250 Ga0501080_0156125 3300049742 Bacteria 2108
251 Ga0501266_000016 3300049763 Bacteria 164181
252 Ga0501280_000092 3300049776 Bacteria 24270
253 Ga0501035_0007437 3300049822 Bacteria 10227
254 Ga0501044_0022583 3300049823 Bacteria 6704
255 nmdc:mga06r32_557_c1 3300050510 Bacteria 32361
256 nmdc:mga08y16_5903_c1 3300050511 Bacteria 12835
257 nmdc:mga0n895_30103_c1 3300050512 Bacteria 5184
258 nmdc:mga0rr50_132087_c1 3300050513 Bacteria 2000
259 nmdc:mga0rr50_249721_c1 3300050513 Bacteria 1473
260 nmdc:mga0a205_76809_c1 3300050515 Bacteria 3228
261 Ga0500595_001821 3300053119 Bacteria 11039
262 Ga0500618_003365 3300053125 Bacteria 5520
263 Ga0500577_0000021 3300053142 Bacteria 43315
264 Ga0500603_001079 3300053150 Bacteria 6423
265 Ga0500584_042967 3300053726 Bacteria 2066
266 2511264219 2511231006 Bacteria 6794709
267 2511297265 2511231011 Bacteria 6149768
268 2511303953 2511231012 Bacteria 6738011
269 2511321502 2511231015 Bacteria 6598026
270 2511357096 2511231021 Bacteria 7302637
271 2511372044 2511231023 Bacteria 6808468
272 2545679072 2545555834 Bacteria 8130841
273 2599352544 2599185160 Bacteria 6844013
274 2599358886 2599185161 Bacteria 6960462
275 2599365593 2599185162 Bacteria 6957254
276 2599371529 2599185163 Bacteria 6995158
277 2599377652 2599185164 Bacteria 6841688
278 2599384971 2599185165 Bacteria 6843250
279 2599390438 2599185166 Bacteria 6959206
280 2599402572 2599185168 Bacteria 6997636
281 2599459378 2599185181 Bacteria 6844519
282 2599466285 2599185182 Bacteria 6883168
283 2599488399 2599185186 Bacteria 6831633
284 2600211982 2599185356 Bacteria 6843884
285 2601772150 2600255313 Bacteria 6842543
286 2644730824 2643221733 Bacteria 5690728
287 2671095882 2667528171 Bacteria 6900659
288 2774133781 2773857673 Bacteria 6513460
289 2784264457 2784132063 Bacteria 6262788
290 2806077799 2802429637 Bacteria 7067217
291 2819687988 2818991461 Bacteria 7026071
292 2819700638 2818991464 Bacteria 6907494
293 2824601728 2824600985 Bacteria 8488197
294 2824611333 2824609381 Bacteria 8672835
295 2824653384 2824653114 Bacteria 8493680
296 2838741781 2838736955 Bacteria 5760694
297 2841845803 2841840854 Bacteria 5761912
298 2842145507 2842140634 Bacteria 5759631
299 2852657463 2852657418 Bacteria 6472974
300 2857614780 2857613821 Bacteria 4917088
301 2894235730 2894232714 Bacteria 8834183
302 2904420098 2904419702 Bacteria 5166287
303 2904520142 2904518522 Bacteria 6068986
304 2929153794 2929150217 Bacteria 5462483
305 2958078001 2958071322 Bacteria 6815895
306 637320788 637000220 Bacteria 7074893
307 641641496 641522639 Bacteria 7737025
308 8005575172 8005570704 Bacteria 6957481
309 8006985924 8006984368 Bacteria 9651211
310 8024488540 8024486573 Bacteria 6540512
311 Ga0105248_10051223
312 JGI25162J39368_1000030
313 JGI25163J39215_1000059
314 JGI25164J39214_1000123
315 JGI25151J46595_10001002
316 JGI25151J46595_10002272
317 JGI25165J46597_1000056
318 JGI25153J46596_10001332
319 rootL2_10170946
320 Ga0055530_10023153
321 Ga0070676_10048691
322 Ga0070666_10017204
323 Ga0070680_100011217
324 Ga0070682_100045804
325 Ga0068868_100140733
326 Ga0070660_100016775
327 Ga0070689_100001613
328 Ga0070668_100009505
329 Ga0070668_100190735
330 Ga0070669_100086339
331 Ga0070688_100000632
332 Ga0070659_100020854
333 Ga0070659_100031314
334 Ga0070714_100029055
335 Ga0070713_100048934
336 Ga0070710_10029310
337 Ga0070711_100026516
338 Ga0070700_100079852
339 Ga0070694_100030567
340 Ga0070678_100029003
341 Ga0070662_100087195
342 Ga0070681_10004260
343 Ga0070681_10053505
344 Ga0070679_100014445
345 Ga0070679_100062268
346 Ga0068853_100067763
347 Ga0070695_100119303
348 Ga0070704_100059958
349 Ga0070664_100246640
350 Ga0068856_100074458
351 Ga0068866_10039399
352 Ga0068870_10012814
353 Ga0068858_100051776
354 Ga0068860_100185141
355 Ga0081455_10067081
356 Ga0081540_1006676
357 Ga0081540_1019185
358 Ga0070717_10002633
359 Ga0070715_10021901
360 Ga0070716_100001521
361 Ga0070716_100087830
362 Ga0075367_10049592
363 Ga0097621_100029999
364 Ga0068871_100057273
365 Ga0068871_100064471
366 Ga0075428_100001874
367 Ga0075430_100027565
368 Ga0075431_100001409
369 Ga0075433_10108531
370 Ga0075434_100016716
371 Ga0075436_100071276
372 Ga0075436_100120861
373 Ga0075435_100083394
374 Ga0105251_10004184
375 Ga0105244_10000002
376 Ga0105244_10000542
377 Ga0105244_10034967
378 Ga0105250_10000399
379 Ga0111539_10006365
380 Ga0111539_10228851
381 Ga0111539_10278426
382 Ga0114129_10000245
383 Ga0105243_10002701
384 Ga0105237_10024131
385 Ga0105238_10069682
386 Ga0105249_10063037
387 Ga0105246_10044597
388 Ga0157371_10000198
389 Ga0157369_10035884
390 Ga0157374_10079536
391 Ga0157378_10081501
392 Ga0157375_10016554
393 Ga0157375_10207443
394 Ga0157376_10002042
395 Ga0182005_1002537
396 Ga0163161_10003426
397 Ga0163161_10125662
398 Ga0206349_1881891
399 Ga0209760_100016
400 Ga0207427_100022
401 Ga0209437_100002
402 Ga0207425_1003962
403 Ga0209129_1000506
404 Ga0209233_1000004
405 Ga0209025_1000097
406 Ga0209758_1000714
407 Ga0209050_1000229
408 Ga0207656_10011948
409 Ga0207696_1000002
410 Ga0207696_1005437
411 Ga0207655_1000012
412 Ga0207655_1000216
413 Ga0207655_1014676
414 Ga0207713_1003160
415 Ga0207713_1008919
416 Ga0207713_1013613
417 Ga0207692_10000597
418 Ga0207685_10002398
419 Ga0207707_10023640
420 Ga0207660_10059975
421 Ga0207657_10017456
422 Ga0207649_10009899
423 Ga0207652_10039247
424 Ga0207694_10050280
425 Ga0207687_10034717
426 Ga0207700_10016861
427 Ga0207700_10021240
428 Ga0207664_10093550
429 Ga0207690_10037106
430 Ga0207690_10040875
431 Ga0207706_10113318
432 Ga0207709_10001741
433 Ga0207709_10041176
434 Ga0207670_10000111
435 Ga0207665_10003014
436 Ga0207711_10021318
437 Ga0207679_10004000
438 Ga0207679_10096216
439 Ga0207667_10093355
440 Ga0207712_10057697
441 Ga0207658_10052013
442 Ga0207703_10035168
443 Ga0207678_10000193
444 Ga0207678_10017092
445 Ga0207678_10084965
446 Ga0207683_10001712
447 Ga0207428_10013821
448 Ga0207428_10098262
449 Ga0268266_10027147
450 Ga0268264_10142883
451 Ga0265327_10000996
452 Ga0307509_10082887
453 Ga0307413_10001840
454 Ga0307406_10000003
455 Ga0307416_100057604
456 Ga0307414_10000001
457 Ga0307411_10000001
458 Ga0307510_10062123
459 Ga0395905_0000048
460 Ga0439466_0020203
461 Ga0439452_000110
462 Ga0439452_000908
463 Ga0439456_001650
464 Ga0439460_0003667
465 Ga0495638_0000129
466 Ga0495638_0004314
467 Ga0495584_0000083
468 Ga0495584_0041317
469 Ga0495585_0000509
470 Ga0495583_0003476
471 Ga0495610_0009733
472 Ga0495616_0026683
473 Ga0495632_0000810
474 Ga0495632_0017251
475 Ga0495643_0000089
476 Ga0495644_0000024
477 Ga0495654_0030503
478 Ga0495654_0053030
479 Ga0495597_0048569
480 Ga0495611_0001487
481 Ga0495625_0102764
482 Ga0495669_0006601
483 Ga0495649_0000152
484 Ga0495660_0003813
485 Ga0495660_0047982
486 Ga0495680_0019054
487 Ga0495673_0001261
488 Ga0495681_0003889
489 Ga0495686_0000599
490 Ga0495602_0084093
491 Ga0496100_0011644
492 Ga0496100_0028430
493 Ga0496101_0010824
494 Ga0496101_0030674
495 Ga0496101_0084656
496 Ga0496102_0008365
497 Ga0496102_0017271
498 Ga0496102_0058726
499 Ga0496103_0005571
500 Ga0496104_0010662
501 Ga0496104_0015785
502 Ga0496104_0090496
503 Ga0496105_0014761
504 Ga0496106_0000778
505 Ga0496106_0006297
506 Ga0496106_0006588
507 Ga0496106_0006811
508 Ga0496106_0008666
509 Ga0496107_0006061
510 Ga0496107_0070518
511 Ga0496108_0000205
512 Ga0496108_0185384
513 Ga0496109_0002235
514 Ga0496110_0010147
515 Ga0496110_0161458
516 Ga0496111_0025129
517 Ga0496112_0062706
518 Ga0496112_0115665
519 Ga0496112_0173913
520 Ga0496112_0299438
521 Ga0496114_0003054
522 Ga0496114_0033733
523 Ga0496115_0002231
524 Ga0496115_0012747
525 Ga0496115_0035098
526 Ga0496115_0042709
527 Ga0496115_0134826
528 Ga0496116_0000771
529 Ga0496117_0000961
530 Ga0496117_0080841
531 Ga0496118_0001929
532 Ga0496118_0035407
533 Ga0496121_0000050
534 Ga0496121_0001327
535 Ga0496122_0001326
536 Ga0496123_0000445
537 Ga0496123_0054849
538 Ga0496123_0084637
539 Ga0496124_0002917
540 Ga0496124_0004545
541 Ga0496124_0007838
542 Ga0496124_0022245
543 Ga0496125_0001321
544 Ga0496126_0002612
545 Ga0496126_0020818
546 Ga0496126_0022574
547 Ga0496126_0022745
548 Ga0495678_002650
549 Ga0501031_0040074
550 Ga0501033_0002321
551 Ga0501036_0018933
552 Ga0501037_0058564
553 Ga0501038_0019123
554 Ga0501039_0005333
555 Ga0501039_0052344
556 Ga0501043_0016142
557 Ga0501046_0022972
558 Ga0501238_000144
559 Ga0501249_001045
560 Ga0501080_0156125
561 Ga0501266_000016
562 Ga0501280_000092
563 Ga0501035_0007437
564 Ga0501044_0022583
565 nmdc:mga06r32_557_c1
566 nmdc:mga08y16_5903_c1
567 nmdc:mga0n895_30103_c1
568 nmdc:mga0rr50_132087_c1
569 nmdc:mga0rr50_249721_c1
570 nmdc:mga0a205_76809_c1
571 Ga0500595_001821
572 Ga0500618_003365
573 Ga0500577_0000021
574 Ga0500603_001079
575 Ga0500584_042967
576 2511264219
577 2511297265
578 2511303953
579 2511321502
580 2511357096
581 2511372044
582 2545679072
583 2599352544
584 2599358886
585 2599365593
586 2599371529
587 2599377652
588 2599384971
589 2599390438
590 2599402572
591 2599459378
592 2599466285
593 2599488399
594 2600211982
595 2601772150
596 2644730824
597 2671095882
598 2774133781
599 2784264457
600 2806077799
601 2819687988
602 2819700638
603 2824601728
604 2824611333
605 2824653384
606 2838741781
607 2841845803
608 2842145507
609 2852657463
610 2857614780
611 2894235730
612 2904420098
613 2904520142
614 2929153794
615 2958078001
616 637320788
617 641641496
618 8005575172
619 8006985924
620 8024488540

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06863

DUF1254

Protein of unknown function (DUF1254)

129

260

0.97

PF06742

DUF1214

Protein of unknown function (DUF1214)

398

508

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3u07-assembly2.cif.gz_B crystal structure of the vpa0106 protein from vibrio parahaemolyticus. northeast structural genomics consortium target vpr106. 0.7114 47 484
3u07-assembly2.cif.gz_B crystal structure of the vpa0106 protein from vibrio parahaemolyticus. northeast structural genomics consortium target vpr106. 0.7083 47 484
3u07-assembly3.cif.gz_C crystal structure of the vpa0106 protein from vibrio parahaemolyticus. northeast structural genomics consortium target vpr106. 0.7048 47 484
3u07-assembly3.cif.gz_C crystal structure of the vpa0106 protein from vibrio parahaemolyticus. northeast structural genomics consortium target vpr106. 0.7017 47 484
3vb9-assembly2.cif.gz_D crystal structure of vpa0735 from vibrio parahaemolyticus in monoclinic form, northeast structural genomics target vpr109 0.6913 44 483
ID Description Score Start End Superfamily
3u07C02 Mainly Beta;Sandwich;Jelly Rolls; 0.8518 361 484 2.60.120.1600
3u07C02 Mainly Beta;Sandwich;Jelly Rolls; 0.8388 361 484 2.60.120.1600
3vb9A04 Mainly Beta;Sandwich;Jelly Rolls;Domain of unknown function DUF1214, C-terminal domain 0.7639 316 483 2.60.120.600
3vb9A04 Mainly Beta;Sandwich;Jelly Rolls;Domain of unknown function DUF1214, C-terminal domain 0.744 316 483 2.60.120.600
3vb9A03 Mainly Beta;Sandwich;Immunoglobulin-like;Domain of unknown function DUF1254 0.6685 110 230 2.60.40.1610
ID Description Score Start End GO Terms
AF-A0A4V2QFK5-F1-model_v4 Uncharacterized protein DUF1214 0.9946 382 484
AF-A0A4V2QFK5-F1-model_v4 Uncharacterized protein DUF1214 0.9757 382 484
AF-A0A1G7JEH3-F1-model_v4 DUF1214 domain-containing protein 0.9756 353 484
AF-A0A662BXD4-F1-model_v4 DUF1214 domain-containing protein 0.9727 377 484
AF-A0A1D8Y5M7-F1-model_v4 deleted 0.9721 49 484

Map