F400458

General Info

Members Datasets Scaffolds Average Seq Length
309 219 618 577

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2622736626|2623585290
Length 627
Sequence VRRDRFVPRNGRDGYRGRVRDPNVSRSVAGQLSAERRADDLRRLRAERFDVLVIGGGVTGAGAALDAASRGLKVALVEARDYAAGTSSRSSKLIHGGLRYLEQLEFHLVHEALTERGLLATRLAPHLVRPVPFLVPLPARRGLHDLPSRVFRRSYYGAGVATYDAFAGMFGGGRGMPLHRHLTREGARRVFPSLRADTLAGAIRYYDGQVDDARLVVTLARTAASLGATVVTSARAVGLIRQAREVTGVRVRDLEAPAGSPDAEFEVRARTVIAATGVWSDDMSRMLNDVGLRPGLRVRASKGVHLVVPRSAITGEAGLILRTATSVLFVIPWGGHWIIGTTDTDWRLDRSHPAASAKDIDYLLEQVNSVLDRPLTKDDIEGVYAGLRPLLAGEADSTSKLSREHAVVEPMLGLLLVAGGKYTTYRVMASDVVDRAARRLGAVRPSRTADLPLLGADGYASTWRDRADLARRHGVPVGVVEHLLERYGTLTLDLLALVDADPLLASPLAGAPEYLAAEVAYAARAEGALHLEDVLTRRTRISIETSHRGLDSAEHAAELMGAVLGWDEATRAREVAHYRARVEAERQSQLMPDDVAADAARLGAPDVRGFAADRGADGDVAEPSPSR

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
50 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
78 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
79 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
85 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
86 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
87 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
88 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
89 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
90 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
91 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
92 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
93 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
94 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
96 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
97 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
98 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
99 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
100 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
101 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
102 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
103 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
118 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
119 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
120 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
121 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
122 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
123 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
124 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
127 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
128 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
129 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
135 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
136 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
140 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
141 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
142 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
154 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
166 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
167 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
168 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
169 2501939600 Micromonospora sp. L5 Isolate Unclassified
170 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
171 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
172 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
173 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
174 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
175 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
176 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
177 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
178 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
179 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
180 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
181 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
182 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
183 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
184 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
185 2855683550 Micromonospora sp. RP3T Isolate Unclassified
186 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
187 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
188 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
189 2858868258 Micromonospora sp. MH33 Isolate Unclassified
190 2858882152 Micromonospora noduli MED15 Isolate Nodule
191 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
192 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
193 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
194 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
195 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
196 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
197 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
198 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
199 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
200 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
201 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
202 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
203 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
204 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
205 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
206 2902582711 Micromonospora sp. AP08 Isolate Unclassified
207 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
208 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
209 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
210 649633069 Micromonospora sp. L5 Isolate Unclassified
211 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
212 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
213 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
214 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
215 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
216 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
217 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
218 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
219 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.17
Metatranscriptomes 0
Isolates 16.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.62
Nodule 1.94
Rhizoplane 5.18
Rhizosphere 76.7
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10017980 3300005327 Bacteria 5654
2 Ga0070683_100000866 3300005329 Bacteria 22398
3 Ga0070683_100043640 3300005329 Bacteria 4133
4 Ga0070683_100126296 3300005329 Bacteria 2418
5 Ga0070680_100000001 3300005336 Bacteria 276263
6 Ga0070680_100091825 3300005336 Bacteria 2514
7 Ga0070660_100022182 3300005339 Bacteria 4692
8 Ga0070687_100049736 3300005343 Bacteria 2162
9 Ga0070661_100028952 3300005344 Bacteria 3997
10 Ga0070668_100003774 3300005347 Bacteria 11186
11 Ga0070669_100002525 3300005353 Bacteria 13228
12 Ga0070675_100040596 3300005354 Bacteria 3800
13 Ga0070671_100049008 3300005355 Bacteria 3514
14 Ga0070709_10024143 3300005434 Bacteria 3577
15 Ga0070705_100032166 3300005440 Bacteria 2912
16 Ga0070708_100000875 3300005445 Bacteria 22760
17 Ga0070708_100009956 3300005445 Bacteria 7685
18 Ga0070681_10028237 3300005458 Bacteria 5640
19 Ga0070706_100004402 3300005467 Bacteria 13608
20 Ga0070706_100012547 3300005467 Bacteria 7847
21 Ga0070706_100018155 3300005467 Bacteria 6489
22 Ga0070706_100093790 3300005467 Bacteria 2785
23 Ga0070707_100008815 3300005468 Bacteria 9356
24 Ga0070707_100019759 3300005468 Bacteria 6350
25 Ga0070707_100043934 3300005468 Bacteria 4277
26 Ga0070698_100016944 3300005471 Bacteria 7681
27 Ga0070698_100028037 3300005471 Bacteria 5852
28 Ga0070699_100002011 3300005518 Bacteria 18362
29 Ga0070699_100044410 3300005518 Bacteria 3847
30 Ga0070679_100075434 3300005530 Bacteria 3362
31 Ga0070679_100135862 3300005530 Bacteria 2440
32 Ga0070684_100003850 3300005535 Bacteria 11352
33 Ga0070684_100068621 3300005535 Bacteria 3116
34 Ga0070684_100150322 3300005535 Bacteria 2109
35 Ga0070697_100000706 3300005536 Bacteria 24906
36 Ga0070697_100005538 3300005536 Bacteria 9731
37 Ga0070697_100024064 3300005536 Bacteria 4848
38 Ga0070697_100042157 3300005536 Bacteria 3694
39 Ga0070686_100009881 3300005544 Bacteria 5364
40 Ga0070696_100013460 3300005546 Bacteria 5489
41 Ga0070693_100004410 3300005547 Bacteria 6654
42 Ga0070665_100169015 3300005548 Bacteria 2188
43 Ga0068855_100076092 3300005563 Bacteria 3896
44 Ga0070664_100057862 3300005564 Bacteria 3296
45 Ga0068856_100158932 3300005614 Bacteria 2270
46 Ga0068859_100053656 3300005617 Bacteria 4055
47 Ga0068859_100118736 3300005617 Bacteria 2710
48 Ga0068863_100018655 3300005841 Bacteria 6638
49 Ga0068863_100075138 3300005841 Bacteria 3197
50 Ga0068863_100104725 3300005841 Bacteria 2691
51 Ga0081540_1000009 3300005983 Bacteria 193562
52 Ga0081540_1001898 3300005983 Bacteria 17502
53 Ga0081539_10000205 3300005985 Bacteria 137262
54 Ga0081539_10000256 3300005985 Bacteria 122838
55 Ga0081539_10001325 3300005985 Bacteria 43208
56 Ga0081539_10027056 3300005985 Bacteria 3641
57 Ga0081539_10041227 3300005985 Bacteria 2701
58 Ga0075365_10000999 3300006038 Bacteria 12085
59 Ga0075365_10048253 3300006038 Bacteria 2802
60 Ga0070712_100016238 3300006175 Bacteria 4807
61 Ga0068871_100055286 3300006358 Bacteria 3222
62 Ga0075428_100000501 3300006844 Bacteria 39750
63 Ga0075428_100001357 3300006844 Bacteria 25986
64 Ga0075428_100042984 3300006844 Bacteria 4969
65 Ga0075430_100002994 3300006846 Bacteria 14141
66 Ga0075430_100003810 3300006846 Bacteria 12694
67 Ga0075430_100059746 3300006846 Bacteria 3204
68 Ga0075431_100050162 3300006847 Bacteria 4303
69 Ga0075431_100137144 3300006847 Bacteria 2523
70 Ga0075433_10024702 3300006852 Bacteria 5075
71 Ga0075429_100009828 3300006880 Bacteria 8296
72 Ga0075429_100014117 3300006880 Bacteria 6920
73 Ga0075429_100036105 3300006880 Bacteria 4298
74 Ga0097620_100053656 3300006931 Bacteria 4055
75 Ga0097620_100118745 3300006931 Bacteria 2710
76 Ga0114129_10000131 3300009147 Bacteria 76741
77 Ga0114129_10000194 3300009147 Bacteria 68056
78 Ga0114129_10013519 3300009147 Bacteria 11631
79 Ga0114129_10194308 3300009147 Bacteria 2753
80 Ga0105241_10055697 3300009174 Bacteria 3030
81 Ga0105242_10068097 3300009176 Bacteria 2944
82 Ga0105248_10083673 3300009177 Bacteria 3589
83 Ga0157373_10008776 3300013100 Bacteria 7489
84 Ga0157369_10052696 3300013105 Bacteria 4401
85 Ga0163163_10003831 3300014325 Bacteria 12803
86 Ga0163163_10021055 3300014325 Bacteria 6151
87 Ga0163163_10042580 3300014325 Bacteria 4448
88 Ga0157377_10010078 3300014745 Bacteria 4665
89 Ga0207642_10037788 3300025899 Bacteria 2083
90 Ga0207688_10039868 3300025901 Bacteria 2609
91 Ga0207699_10076515 3300025906 Bacteria 2062
92 Ga0207684_10013652 3300025910 Bacteria 7018
93 Ga0207684_10014244 3300025910 Bacteria 6860
94 Ga0207684_10103219 3300025910 Bacteria 2438
95 Ga0207654_10022103 3300025911 Bacteria 3390
96 Ga0207693_10019330 3300025915 Bacteria 5420
97 Ga0207660_10000001 3300025917 Bacteria 1034169
98 Ga0207660_10065422 3300025917 Bacteria 2627
99 Ga0207662_10010300 3300025918 Bacteria 5160
100 Ga0207662_10060682 3300025918 Bacteria 2268
101 Ga0207662_10066981 3300025918 Bacteria 2165
102 Ga0207657_10011620 3300025919 Bacteria 8731
103 Ga0207652_10096288 3300025921 Bacteria 2607
104 Ga0207646_10010416 3300025922 Bacteria 9092
105 Ga0207646_10016707 3300025922 Bacteria 6884
106 Ga0207659_10074954 3300025926 Bacteria 2481
107 Ga0207700_10088570 3300025928 Bacteria 2437
108 Ga0207691_10037552 3300025940 Bacteria 4485
109 Ga0207689_10005933 3300025942 Bacteria 10814
110 Ga0207661_10008586 3300025944 Bacteria 7301
111 Ga0207661_10093290 3300025944 Bacteria 2512
112 Ga0207668_10002777 3300025972 Bacteria 10237
113 Ga0207703_10113428 3300026035 Bacteria 2316
114 Ga0207678_10006649 3300026067 Bacteria 10249
115 Ga0207641_10057518 3300026088 Bacteria 3307
116 Ga0207674_10014886 3300026116 Bacteria 8576
117 Ga0207674_10173318 3300026116 Bacteria 2110
118 Ga0207675_100175629 3300026118 Bacteria 2049
119 Ga0207683_10000557 3300026121 Bacteria 34447
120 Ga0307517_10067421 3300028786 Bacteria 3276
121 Ga0307515_10000119 3300028794 Bacteria 189566
122 Ga0307515_10014512 3300028794 Bacteria 14592
123 Ga0307515_10035835 3300028794 Bacteria 8054
124 Ga0307515_10080883 3300028794 Bacteria 4228
125 Ga0307512_10018747 3300030522 Bacteria 6317
126 Ga0307512_10027635 3300030522 Bacteria 4988
127 Ga0307512_10034572 3300030522 Bacteria 4322
128 Ga0307513_10008290 3300031456 Bacteria 13318
129 Ga0307513_10035536 3300031456 Bacteria 5573
130 Ga0307513_10058060 3300031456 Bacteria 4116
131 Ga0307408_100119881 3300031548 Bacteria 2036
132 Ga0307508_10000820 3300031616 Bacteria 36285
133 Ga0307508_10022021 3300031616 Bacteria 5798
134 Ga0307516_10004527 3300031730 Bacteria 17097
135 Ga0307516_10034475 3300031730 Bacteria 5085
136 Ga0307410_10045033 3300031852 Bacteria 2935
137 Ga0307410_10079155 3300031852 Bacteria 2302
138 Ga0307409_100004610 3300031995 Bacteria 7780
139 Ga0307409_100020857 3300031995 Bacteria 4477
140 Ga0307416_100007197 3300032002 Bacteria 7046
141 Ga0307415_100000579 3300032126 Bacteria 16085
142 Ga0307415_100032857 3300032126 Bacteria 3361
143 Ga0307415_100075379 3300032126 Bacteria 2387
144 Ga0307507_10034489 3300033179 Bacteria 5227
145 Ga0373948_0005136 3300034817 Bacteria 2105
146 Ga0373938_0002354 3300034957 Bacteria 3044
147 Ga0373934_0006270 3300035086 Bacteria 4408
148 Ga0373940_0001470 3300035088 Bacteria 4271
149 Ga0373944_0002682 3300035089 Bacteria 4537
150 Ga0373949_0003597 3300035090 Bacteria 3660
151 Ga0373951_0000012 3300035091 Bacteria 73071
152 Ga0373923_0010112 3300035111 Bacteria 3423
153 Ga0373932_0005878 3300035112 Bacteria 2889
154 Ga0373932_0011698 3300035112 Bacteria 2149
155 Ga0373936_0006979 3300035113 Bacteria 4250
156 Ga0373936_0011754 3300035113 Bacteria 3319
157 Ga0373953_0048332 3300035117 Bacteria 1713
158 Ga0373956_0027448 3300035119 Bacteria 2471
159 Ga0373957_0002716 3300035120 Bacteria 5083
160 Ga0373943_0029528 3300035170 Bacteria 2590
161 Ga0373946_0002417 3300035171 Bacteria 6603
162 Ga0373955_0007342 3300035172 Bacteria 5063
163 Ga0373942_0000121 3300035207 Bacteria 18254
164 Ga0373942_0014657 3300035207 Bacteria 1901
165 Ga0373961_0006642 3300035241 Bacteria 2781
166 Ga0373931_0000001 3300035691 Bacteria 634029
167 Ga0373931_0000225 3300035691 Bacteria 24016
168 Ga0373935_0012053 3300035692 Bacteria 5197
169 Ga0373933_0021821 3300035724 Bacteria 3642
170 Ga0373933_0046552 3300035724 Bacteria 2576
171 Ga0373937_0129267 3300036401 Bacteria 2358
172 Ga0373937_0220935 3300036401 Bacteria 1783
173 Ga0373925_0036242 3300037068 Bacteria 3640
174 Ga0395899_0018485 3300037312 Bacteria 5299
175 Ga0395899_0037371 3300037312 Bacteria 3640
176 Ga0395900_0025794 3300037418 Bacteria 6016
177 Ga0395900_0084634 3300037418 Bacteria 3259
178 Ga0395898_0041235 3300037466 Bacteria 4560
179 Ga0395898_0045548 3300037466 Bacteria 4312
180 Ga0395905_0030392 3300037471 Bacteria 5090
181 Ga0395905_0042938 3300037471 Bacteria 4242
182 Ga0395901_0006299 3300038443 Bacteria 12019
183 Ga0395901_0020791 3300038443 Bacteria 6718
184 Ga0466967_0105400 3300045976 Bacteria 2583
185 Ga0495603_0010165 3300046455 Bacteria 5693
186 Ga0495641_0032860 3300046461 Bacteria 2466
187 Ga0495651_0046702 3300046462 Bacteria 3351
188 Ga0495651_0109506 3300046462 Bacteria 2044
189 Ga0495653_0029149 3300046463 Bacteria 4410
190 Ga0495582_0005854 3300046473 Bacteria 6851
191 Ga0495639_0000475 3300046475 Bacteria 19124
192 Ga0495664_0057605 3300046477 Bacteria 2311
193 Ga0495594_0020708 3300046499 Bacteria 3505
194 Ga0495594_0027889 3300046499 Bacteria 3045
195 Ga0495606_0001508 3300046507 Bacteria 30944
196 Ga0495608_0066211 3300046511 Bacteria 2365
197 Ga0495628_0016897 3300046516 Bacteria 6081
198 Ga0495630_0001810 3300046517 Bacteria 14915
199 Ga0495665_0003363 3300046531 Bacteria 8675
200 Ga0495640_0003014 3300046533 Bacteria 13555
201 Ga0495587_0004987 3300046536 Bacteria 8688
202 Ga0495587_0061137 3300046536 Bacteria 2207
203 Ga0495667_0004355 3300046559 Bacteria 9557
204 Ga0495667_0013748 3300046559 Bacteria 5467
205 Ga0495668_0000111 3300046616 Bacteria 130715
206 Ga0495634_0003959 3300046642 Bacteria 11755
207 Ga0495625_0000348 3300046660 Bacteria 70696
208 Ga0495635_0029572 3300046663 Bacteria 3810
209 Ga0495635_0055043 3300046663 Bacteria 2740
210 Ga0495599_0014834 3300046678 Bacteria 4825
211 Ga0495646_0001699 3300046680 Bacteria 13192
212 Ga0495646_0038690 3300046680 Bacteria 2944
213 Ga0495647_0005061 3300046681 Bacteria 4316
214 Ga0495658_0002708 3300046683 Bacteria 8928
215 Ga0495613_0002735 3300046689 Bacteria 13240
216 Ga0495624_0006660 3300046690 Bacteria 8169
217 Ga0495581_0005425 3300047315 Bacteria 7378
218 Ga0495604_0019063 3300047317 Bacteria 5494
219 Ga0495676_0019183 3300047321 Bacteria 6017
220 Ga0495680_0011049 3300047322 Bacteria 8020
221 Ga0495680_0032785 3300047322 Bacteria 4212
222 Ga0495684_0012293 3300047471 Bacteria 6603
223 Ga0495602_0038162 3300048088 Bacteria 4447
224 Ga0495626_0000975 3300048091 Bacteria 24642
225 Ga0496102_0186796 3300048905 Bacteria 1953
226 Ga0496104_0049673 3300048907 Bacteria 3955
227 Ga0496105_0114367 3300048908 Bacteria 2226
228 Ga0496106_0022684 3300048909 Bacteria 4664
229 Ga0496107_0056438 3300048910 Bacteria 2837
230 Ga0496108_0000053 3300048911 Bacteria 125641
231 Ga0496108_0003096 3300048911 Bacteria 13370
232 Ga0496108_0081062 3300048911 Bacteria 2750
233 Ga0496110_0007011 3300048913 Bacteria 8966
234 Ga0496110_0038207 3300048913 Bacteria 4175
235 Ga0496111_0030991 3300048914 Bacteria 3806
236 Ga0496111_0038707 3300048914 Bacteria 3417
237 Ga0496112_0000005 3300048915 Bacteria 525541
238 Ga0496112_0010476 3300048915 Bacteria 8408
239 Ga0496114_0009506 3300048917 Bacteria 7716
240 Ga0496114_0057634 3300048917 Bacteria 3243
241 Ga0501046_0044841 3300049580 Bacteria 3515
242 Ga0501044_0108714 3300049823 Bacteria 2783
243 nmdc:mga0yw44_422_c1 3300050492 Bacteria 14815
244 nmdc:mga0yw44_948_c1 3300050492 Bacteria 11013
245 nmdc:mga05p37_5433_c1 3300050507 Bacteria 14974
246 nmdc:mga05p37_8943_c1 3300050507 Bacteria 11843
247 nmdc:mga09592_11678_c1 3300050508 Bacteria 7143
248 nmdc:mga09592_1707_c1 3300050508 Bacteria 17686
249 nmdc:mga0qj67_26_c1 3300050509 Bacteria 103914
250 nmdc:mga0qj67_455_c1 3300050509 Bacteria 28011
251 nmdc:mga06r32_11220_c1 3300050510 Bacteria 8072
252 nmdc:mga06r32_188_c1 3300050510 Bacteria 26498
253 nmdc:mga06r32_20624_c1 3300050510 Bacteria 6071
254 nmdc:mga0n895_212863_c1 3300050512 Bacteria 1963
255 Ga0495601_0061468 3300053077 Bacteria 2384
256 Ga0495619_0012256 3300053085 Bacteria 5394
257 Ga0500644_0003539 3300053088 Bacteria 3873
258 2623585290 2622736626 Bacteria 7181580
259 2501944901 2501939600 Bacteria 6907073
260 2515495411 2515154088 Bacteria 5526283
261 2515720200 2515154129 Bacteria 5584369
262 2515758217 2515154137 Bacteria 5711575
263 2515854101 2515154155 Bacteria 7985436
264 2516084479 2515154202 Bacteria 5471270
265 2516089573 2515154203 Bacteria 5458536
266 2676478049 2675903058 Bacteria 6822861
267 2676484999 2675903059 Bacteria 8644972
268 2753270035 2751185782 Bacteria 11227053
269 2772645425 2772190715 Bacteria 6959372
270 2827629378 2827628540 Bacteria 6858585
271 2831937163 2831935698 Bacteria 5963223
272 2832010139 2832004796 Bacteria 6538017
273 2855674836 2855670206 Bacteria 7120389
274 2855679393 2855676851 Bacteria 7063653
275 2855687085 2855683550 Bacteria 7134265
276 2856859218 2856858025 Bacteria 7255264
277 2857290161 2857288857 Bacteria 7189066
278 2858850121 2858848962 Bacteria 6963058
279 2858873359 2858868258 Bacteria 7683772
280 2858885611 2858882152 Bacteria 7230291
281 2858893883 2858888857 Bacteria 7060307
282 2858900233 2858895516 Bacteria 7378898
283 2858902708 2858902515 Bacteria 7086037
284 2861527238 2861520306 Bacteria 8348283
285 2866066936 2866065130 Bacteria 6518152
286 2867306048 2867302475 Bacteria 7087181
287 2867317248 2867312974 Bacteria 7058875
288 2867323065 2867319477 Bacteria 7069771
289 2867510668 2867507094 Bacteria 6506033
290 2869055014 2869048445 Bacteria 6875584
291 2869062923 2869061728 Bacteria 7112407
292 2869075146 2869068681 Bacteria 7205615
293 2880494943 2880489317 Bacteria 7096270
294 2880497389 2880495981 Bacteria 7340502
295 2887486572 2887478801 Bacteria 8972725
296 2902584603 2902582711 Bacteria 6187705
297 2929225950 2929219909 Bacteria 6984360
298 2929232611 2929226422 Bacteria 7248583
299 2996222037 2996221748 Bacteria 6799777
300 649812913 649633069 Bacteria 6962533
301 8001785845 8001781756 Bacteria 9586736
302 8003833225 8003830390 Bacteria 6541657
303 8003863373 8003856774 Bacteria 7675274
304 8003876267 8003870546 Bacteria 7396674
305 8054704297 8054704163 Bacteria 7247792
306 8054731613 8054727385 Bacteria 7558670
307 8054739943 8054734606 Bacteria 6947278
308 8055415452 8055412473 Bacteria 6257500
309 8057573880 8057568493 Bacteria 7221719
310 Ga0070658_10017980
311 Ga0070683_100000866
312 Ga0070683_100043640
313 Ga0070683_100126296
314 Ga0070680_100000001
315 Ga0070680_100091825
316 Ga0070660_100022182
317 Ga0070687_100049736
318 Ga0070661_100028952
319 Ga0070668_100003774
320 Ga0070669_100002525
321 Ga0070675_100040596
322 Ga0070671_100049008
323 Ga0070709_10024143
324 Ga0070705_100032166
325 Ga0070708_100000875
326 Ga0070708_100009956
327 Ga0070681_10028237
328 Ga0070706_100004402
329 Ga0070706_100012547
330 Ga0070706_100018155
331 Ga0070706_100093790
332 Ga0070707_100008815
333 Ga0070707_100019759
334 Ga0070707_100043934
335 Ga0070698_100016944
336 Ga0070698_100028037
337 Ga0070699_100002011
338 Ga0070699_100044410
339 Ga0070679_100075434
340 Ga0070679_100135862
341 Ga0070684_100003850
342 Ga0070684_100068621
343 Ga0070684_100150322
344 Ga0070697_100000706
345 Ga0070697_100005538
346 Ga0070697_100024064
347 Ga0070697_100042157
348 Ga0070686_100009881
349 Ga0070696_100013460
350 Ga0070693_100004410
351 Ga0070665_100169015
352 Ga0068855_100076092
353 Ga0070664_100057862
354 Ga0068856_100158932
355 Ga0068859_100053656
356 Ga0068859_100118736
357 Ga0068863_100018655
358 Ga0068863_100075138
359 Ga0068863_100104725
360 Ga0081540_1000009
361 Ga0081540_1001898
362 Ga0081539_10000205
363 Ga0081539_10000256
364 Ga0081539_10001325
365 Ga0081539_10027056
366 Ga0081539_10041227
367 Ga0075365_10000999
368 Ga0075365_10048253
369 Ga0070712_100016238
370 Ga0068871_100055286
371 Ga0075428_100000501
372 Ga0075428_100001357
373 Ga0075428_100042984
374 Ga0075430_100002994
375 Ga0075430_100003810
376 Ga0075430_100059746
377 Ga0075431_100050162
378 Ga0075431_100137144
379 Ga0075433_10024702
380 Ga0075429_100009828
381 Ga0075429_100014117
382 Ga0075429_100036105
383 Ga0097620_100053656
384 Ga0097620_100118745
385 Ga0114129_10000131
386 Ga0114129_10000194
387 Ga0114129_10013519
388 Ga0114129_10194308
389 Ga0105241_10055697
390 Ga0105242_10068097
391 Ga0105248_10083673
392 Ga0157373_10008776
393 Ga0157369_10052696
394 Ga0163163_10003831
395 Ga0163163_10021055
396 Ga0163163_10042580
397 Ga0157377_10010078
398 Ga0207642_10037788
399 Ga0207688_10039868
400 Ga0207699_10076515
401 Ga0207684_10013652
402 Ga0207684_10014244
403 Ga0207684_10103219
404 Ga0207654_10022103
405 Ga0207693_10019330
406 Ga0207660_10000001
407 Ga0207660_10065422
408 Ga0207662_10010300
409 Ga0207662_10060682
410 Ga0207662_10066981
411 Ga0207657_10011620
412 Ga0207652_10096288
413 Ga0207646_10010416
414 Ga0207646_10016707
415 Ga0207659_10074954
416 Ga0207700_10088570
417 Ga0207691_10037552
418 Ga0207689_10005933
419 Ga0207661_10008586
420 Ga0207661_10093290
421 Ga0207668_10002777
422 Ga0207703_10113428
423 Ga0207678_10006649
424 Ga0207641_10057518
425 Ga0207674_10014886
426 Ga0207674_10173318
427 Ga0207675_100175629
428 Ga0207683_10000557
429 Ga0307517_10067421
430 Ga0307515_10000119
431 Ga0307515_10014512
432 Ga0307515_10035835
433 Ga0307515_10080883
434 Ga0307512_10018747
435 Ga0307512_10027635
436 Ga0307512_10034572
437 Ga0307513_10008290
438 Ga0307513_10035536
439 Ga0307513_10058060
440 Ga0307408_100119881
441 Ga0307508_10000820
442 Ga0307508_10022021
443 Ga0307516_10004527
444 Ga0307516_10034475
445 Ga0307410_10045033
446 Ga0307410_10079155
447 Ga0307409_100004610
448 Ga0307409_100020857
449 Ga0307416_100007197
450 Ga0307415_100000579
451 Ga0307415_100032857
452 Ga0307415_100075379
453 Ga0307507_10034489
454 Ga0373948_0005136
455 Ga0373938_0002354
456 Ga0373934_0006270
457 Ga0373940_0001470
458 Ga0373944_0002682
459 Ga0373949_0003597
460 Ga0373951_0000012
461 Ga0373923_0010112
462 Ga0373932_0005878
463 Ga0373932_0011698
464 Ga0373936_0006979
465 Ga0373936_0011754
466 Ga0373953_0048332
467 Ga0373956_0027448
468 Ga0373957_0002716
469 Ga0373943_0029528
470 Ga0373946_0002417
471 Ga0373955_0007342
472 Ga0373942_0000121
473 Ga0373942_0014657
474 Ga0373961_0006642
475 Ga0373931_0000001
476 Ga0373931_0000225
477 Ga0373935_0012053
478 Ga0373933_0021821
479 Ga0373933_0046552
480 Ga0373937_0129267
481 Ga0373937_0220935
482 Ga0373925_0036242
483 Ga0395899_0018485
484 Ga0395899_0037371
485 Ga0395900_0025794
486 Ga0395900_0084634
487 Ga0395898_0041235
488 Ga0395898_0045548
489 Ga0395905_0030392
490 Ga0395905_0042938
491 Ga0395901_0006299
492 Ga0395901_0020791
493 Ga0466967_0105400
494 Ga0495603_0010165
495 Ga0495641_0032860
496 Ga0495651_0046702
497 Ga0495651_0109506
498 Ga0495653_0029149
499 Ga0495582_0005854
500 Ga0495639_0000475
501 Ga0495664_0057605
502 Ga0495594_0020708
503 Ga0495594_0027889
504 Ga0495606_0001508
505 Ga0495608_0066211
506 Ga0495628_0016897
507 Ga0495630_0001810
508 Ga0495665_0003363
509 Ga0495640_0003014
510 Ga0495587_0004987
511 Ga0495587_0061137
512 Ga0495667_0004355
513 Ga0495667_0013748
514 Ga0495668_0000111
515 Ga0495634_0003959
516 Ga0495625_0000348
517 Ga0495635_0029572
518 Ga0495635_0055043
519 Ga0495599_0014834
520 Ga0495646_0001699
521 Ga0495646_0038690
522 Ga0495647_0005061
523 Ga0495658_0002708
524 Ga0495613_0002735
525 Ga0495624_0006660
526 Ga0495581_0005425
527 Ga0495604_0019063
528 Ga0495676_0019183
529 Ga0495680_0011049
530 Ga0495680_0032785
531 Ga0495684_0012293
532 Ga0495602_0038162
533 Ga0495626_0000975
534 Ga0496102_0186796
535 Ga0496104_0049673
536 Ga0496105_0114367
537 Ga0496106_0022684
538 Ga0496107_0056438
539 Ga0496108_0000053
540 Ga0496108_0003096
541 Ga0496108_0081062
542 Ga0496110_0007011
543 Ga0496110_0038207
544 Ga0496111_0030991
545 Ga0496111_0038707
546 Ga0496112_0000005
547 Ga0496112_0010476
548 Ga0496114_0009506
549 Ga0496114_0057634
550 Ga0501046_0044841
551 Ga0501044_0108714
552 nmdc:mga0yw44_422_c1
553 nmdc:mga0yw44_948_c1
554 nmdc:mga05p37_5433_c1
555 nmdc:mga05p37_8943_c1
556 nmdc:mga09592_11678_c1
557 nmdc:mga09592_1707_c1
558 nmdc:mga0qj67_26_c1
559 nmdc:mga0qj67_455_c1
560 nmdc:mga06r32_11220_c1
561 nmdc:mga06r32_188_c1
562 nmdc:mga06r32_20624_c1
563 nmdc:mga0n895_212863_c1
564 Ga0495601_0061468
565 Ga0495619_0012256
566 Ga0500644_0003539
567 2623585290
568 2501944901
569 2515495411
570 2515720200
571 2515758217
572 2515854101
573 2516084479
574 2516089573
575 2676478049
576 2676484999
577 2753270035
578 2772645425
579 2827629378
580 2831937163
581 2832010139
582 2855674836
583 2855679393
584 2855687085
585 2856859218
586 2857290161
587 2858850121
588 2858873359
589 2858885611
590 2858893883
591 2858900233
592 2858902708
593 2861527238
594 2866066936
595 2867306048
596 2867317248
597 2867323065
598 2867510668
599 2869055014
600 2869062923
601 2869075146
602 2880494943
603 2880497389
604 2887486572
605 2902584603
606 2929225950
607 2929232611
608 2996222037
609 649812913
610 8001785845
611 8003833225
612 8003863373
613 8003876267
614 8054704297
615 8054731613
616 8054739943
617 8055415452
618 8057573880

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16901

DAO_C

C-terminal domain of alpha-glycerophosphate oxidase

446

571

0.98

PF00890

FAD_binding_2

FAD binding domain

50

102

0.94

PF12831

FAD_oxidored

FAD dependent oxidoreductase

50

115

0.9

PF00890

FAD_binding_2

FAD binding domain

140

316

0.79

PF01266

DAO

FAD dependent oxidoreductase

50

426

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ocm-assembly1.cif.gz_A imine reductase from streptosporangium roseum in complex with nadp+ and 2,2,2-trifluoroacetophenone hydrate 0.9427 30 60
8i4n-assembly1.cif.gz_B crystal strcuture of 6-phosphogluconate dehydrogenase from corynebacterium glutamicum 0.9419 31 62
3l6d-assembly1.cif.gz_A crystal structure of putative oxidoreductase from pseudomonas putida kt2440 0.9417 32 60
6fqz-assembly1.cif.gz_B plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor nadp+ and in complex with its substrate 6-phosphogluconate 0.9388 32 62
7wnw-assembly1.cif.gz_B crystal structure of imine reductase mutant(m5) from actinoalloteichus hymeniacidonis in complex with nadph 0.9367 32 60
ID Description Score Start End Superfamily
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9909 34 62 3.50.50.60
af_I6XF25_1_136_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9843 33 62 3.40.50.720
af_Q58053_11_135_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9828 35 65 3.50.50.60
af_P0A6S7_1_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9735 31 62 3.40.50.720
1mfzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9645 34 62 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6V8KAD6-F1-model_v4 Alpha-glycerophosphate oxidase C-terminal domain-containing protein 0.984 416 592 GO:0004368
GO:0046168
AF-D9X9U9-F1-model_v4 Glycerol-3-phosphate dehydrogenase 0.9818 196 592 GO:0004368
GO:0046168
AF-A0A1X1WZ23-F1-model_v4 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.9807 15 592 GO:0004368
GO:0009331
GO:0046168
AF-A0A558A0N4-F1-model_v4 Glycerol-3-phosphate dehydrogenase/oxidase 0.9759 236 590 GO:0004368
GO:0046168
AF-A0A2V2Q9A5-F1-model_v4 deleted 0.9755 31 592

Map