F399955

General Info

Members Datasets Scaffolds Average Seq Length
308 191 616 454

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842134933|2842135404
Length 455
Sequence NETTLPNGLSVDDARAEAARAYELDRKHVFHSWSAQAEISPMVITAAQGSYIWDGEGRRLLDFSCQLVNTNIGHQHPKVVAAIQAQAAKLCTVAPQHANDARSEAARLIAERTPGELNRIFFTNGGADAVEHAVRMARLHTGKYKVLSRYRSYHGGTETAINLTGDPRRWPNDHGNAGVVHFFGPFLYRSQFHATTEAEESARALAHLEDIVRLEGPSTIAAIVLESIPGTAGIMVPPPGYLAGVRDICDRYGIVMIADEVMAGFGRSGKWFSIDHFDVTPDLLTFAKGVNSGYVPLGGVAIGPAIAETFAHRPYPGGLTYSGHPLATAAAVATINAMEEEDIVGNAARIGAEVLGPGLAELAARHPSVGEVRGTGVFWAIELVANPQTREPLAPYGASSAAMNAVVAACKANGLLPFANFNRIHAVPPCTVTADEVREGLAILDQALDVADSHL

Samples

Sample ID Description Type Environment
1 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
2 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
3 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
4 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
5 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
48 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
51 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
85 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
90 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
91 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
99 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
100 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
107 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
111 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
112 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
113 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
114 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
115 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
116 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
156 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
164 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
165 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
168 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
169 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
171 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
172 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
173 2643221617 Nocardioides sp. Root79 Isolate Unclassified
174 2643221620 Nocardioides sp. Root240 Isolate Unclassified
175 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
176 2643221711 Terrabacter sp. Root85 Isolate Unclassified
177 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
178 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
179 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
180 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
181 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
182 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
183 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
184 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
185 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
186 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
187 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
188 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
189 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
190 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
191 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.21
Metatranscriptomes 0.97
Isolates 6.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.49
Nodule 0.32
Rhizoplane 19.48
Rhizosphere 67.86
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10002871 3300002067 Bacteria 5940
2 JGI24735J21928_10027954 3300002067 Bacteria 1686
3 Ga0055537_1000002 3300003773 Bacteria 250042
4 Ga0055524_1000002 3300003775 Bacteria 459550
5 Ga0055534_1000005 3300003784 Bacteria 238704
6 Ga0055528_1000001 3300003790 Bacteria 402384
7 Ga0070658_10137186 3300005327 Bacteria 2042
8 Ga0070683_100009309 3300005329 Bacteria 8394
9 Ga0070660_100029755 3300005339 Bacteria 4095
10 Ga0070668_100034668 3300005347 Bacteria 3847
11 Ga0070659_100070772 3300005366 Bacteria 2772
12 Ga0070714_100000498 3300005435 Bacteria 28521
13 Ga0070678_100101980 3300005456 Bacteria 2226
14 Ga0070662_100121088 3300005457 Bacteria 2006
15 Ga0070707_100238753 3300005468 Bacteria 1769
16 Ga0070684_100000608 3300005535 Bacteria 24723
17 Ga0070696_100057141 3300005546 Bacteria 2722
18 Ga0068855_100019945 3300005563 Bacteria 8051
19 Ga0068855_100314835 3300005563 Bacteria 1731
20 Ga0070664_100090159 3300005564 Bacteria 2653
21 Ga0068856_100125335 3300005614 Bacteria 2571
22 Ga0070702_100000621 3300005615 Bacteria 13063
23 Ga0068859_100026666 3300005617 Bacteria 5795
24 Ga0068863_100231154 3300005841 Bacteria 1784
25 Ga0068858_100060852 3300005842 Bacteria 3490
26 Ga0068860_100025188 3300005843 Bacteria 5741
27 Ga0068860_100040925 3300005843 Bacteria 4428
28 Ga0081455_10000018 3300005937 Bacteria 173683
29 Ga0081455_10043632 3300005937 Bacteria 3920
30 Ga0075368_10000426 3300006042 Bacteria 12442
31 Ga0075363_100000654 3300006048 Bacteria 11513
32 Ga0075367_10018727 3300006178 Bacteria 3826
33 Ga0075428_100050600 3300006844 Bacteria 4556
34 Ga0097620_100026666 3300006931 Bacteria 5795
35 Ga0105245_10001813 3300009098 Bacteria 19433
36 Ga0105247_10001818 3300009101 Bacteria 14952
37 Ga0105247_10091136 3300009101 Bacteria 1935
38 Ga0114129_10000457 3300009147 Bacteria 48811
39 Ga0114129_10087560 3300009147 Bacteria 4318
40 Ga0114129_10252542 3300009147 Bacteria 2366
41 Ga0105243_10011257 3300009148 Bacteria 6765
42 Ga0105248_10016571 3300009177 Bacteria 8115
43 Ga0105248_10145563 3300009177 Bacteria 2674
44 Ga0105238_10079890 3300009551 Bacteria 3260
45 Ga0105239_10002393 3300010375 Bacteria 23914
46 Ga0105246_10002116 3300011119 Bacteria 11978
47 Ga0157369_10263659 3300013105 Bacteria 1796
48 Ga0163162_10031261 3300013306 Bacteria 5280
49 Ga0157372_10032234 3300013307 Bacteria 5744
50 Ga0157375_10005200 3300013308 Bacteria 11292
51 Ga0157375_10222360 3300013308 Bacteria 2046
52 Ga0163163_10005644 3300014325 Bacteria 10844
53 Ga0163163_10091367 3300014325 Bacteria 3058
54 Ga0163163_10154249 3300014325 Bacteria 2340
55 Ga0157380_10169005 3300014326 Bacteria 1908
56 Ga0157377_10032592 3300014745 Bacteria 2838
57 Ga0157379_10026192 3300014968 Bacteria 5190
58 Ga0157379_10066815 3300014968 Bacteria 3215
59 Ga0183360_10003 3300015689 Bacteria 713221
60 Ga0197907_10260063 3300020069 Bacteria 1691
61 Ga0206353_10218470 3300020082 Bacteria 3991
62 Ga0206353_11597542 3300020082 Bacteria 1625
63 Ga0209759_1000660 3300025256 Bacteria 31995
64 Ga0209565_1000002 3300025263 Bacteria 1423083
65 Ga0209673_1000002 3300025273 Bacteria 1423083
66 Ga0209675_1000002 3300025291 Bacteria 1423083
67 Ga0209564_1000004 3300025295 Bacteria 1424639
68 Ga0209256_1000004 3300025299 Bacteria 1424643
69 Ga0209257_1006163 3300025304 Bacteria 7910
70 Ga0207710_10001397 3300025900 Bacteria 12094
71 Ga0207688_10008504 3300025901 Bacteria 5586
72 Ga0207688_10008763 3300025901 Bacteria 5504
73 Ga0207647_10032128 3300025904 Bacteria 3375
74 Ga0207695_10153560 3300025913 Bacteria 2239
75 Ga0207671_10169430 3300025914 Bacteria 1695
76 Ga0207657_10028713 3300025919 Bacteria 5070
77 Ga0207652_10234034 3300025921 Bacteria 1656
78 Ga0207694_10051784 3300025924 Bacteria 3182
79 Ga0207687_10028519 3300025927 Bacteria 3750
80 Ga0207686_10053501 3300025934 Bacteria 2524
81 Ga0207709_10031944 3300025935 Bacteria 3080
82 Ga0207709_10154146 3300025935 Bacteria 1595
83 Ga0207711_10058784 3300025941 Bacteria 3310
84 Ga0207711_10082782 3300025941 Bacteria 2806
85 Ga0207689_10066432 3300025942 Bacteria 2965
86 Ga0207661_10017972 3300025944 Bacteria 5247
87 Ga0207661_10094140 3300025944 Bacteria 2502
88 Ga0207658_10024816 3300025986 Bacteria 4196
89 Ga0207703_10020827 3300026035 Bacteria 5130
90 Ga0207702_10032996 3300026078 Bacteria 4322
91 Ga0207641_10070243 3300026088 Bacteria 3009
92 Ga0207641_10197260 3300026088 Bacteria 1854
93 Ga0207674_10047673 3300026116 Bacteria 4390
94 Ga0207683_10087393 3300026121 Bacteria 2772
95 Ga0207683_10169611 3300026121 Bacteria 1976
96 Ga0207698_10190433 3300026142 Bacteria 1826
97 Ga0209813_10028223 3300027866 Bacteria 1636
98 Ga0268264_10029046 3300028381 Bacteria 4528
99 Ga0268264_10033829 3300028381 Bacteria 4202
100 Ga0265328_10017213 3300031239 Bacteria 2801
101 Ga0265314_10024449 3300031711 Bacteria 4580
102 Ga0307405_10027792 3300031731 Bacteria 3286
103 Ga0307405_10032521 3300031731 Bacteria 3084
104 Ga0307413_10147486 3300031824 Bacteria 1635
105 Ga0307410_10003180 3300031852 Bacteria 8176
106 Ga0307410_10019927 3300031852 Bacteria 4092
107 Ga0307407_10043124 3300031903 Bacteria 2534
108 Ga0307409_100004467 3300031995 Bacteria 7866
109 Ga0307409_100068991 3300031995 Bacteria 2798
110 Ga0307416_100005767 3300032002 Bacteria 7669
111 Ga0307416_100025714 3300032002 Bacteria 4322
112 Ga0307416_100218682 3300032002 Bacteria 1825
113 Ga0307415_100000029 3300032126 Bacteria 60960
114 Ga0307415_100058618 3300032126 Bacteria 2651
115 Ga0373942_0011674 3300035207 Bacteria 2087
116 Ga0316574_0097789 3300035398 Bacteria 1876
117 Ga0373947_0127555 3300035725 Bacteria 1622
118 Ga0373937_0201526 3300036401 Bacteria 1871
119 Ga0395900_0055864 3300037418 Bacteria 4065
120 Ga0395898_0001900 3300037466 Bacteria 26601
121 Ga0436364_1474689 3300037853 Bacteria 3531
122 Ga0395901_0009779 3300038443 Bacteria 9725
123 Ga0395901_0051561 3300038443 Bacteria 4278
124 Ga0436365_1483491 3300039437 Bacteria 8181
125 Ga0439442_002127 3300042002 Bacteria 3896
126 Ga0439449_0006197 3300042007 Bacteria 4572
127 Ga0439462_0006145 3300042015 Bacteria 2978
128 Ga0466969_0052634 3300044656 Bacteria 2000
129 Ga0466969_0075521 3300044656 Bacteria 1615
130 Ga0466972_0026315 3300044658 Bacteria 2883
131 Ga0466966_0036271 3300044684 Bacteria 3184
132 Ga0466966_0092796 3300044684 Bacteria 1873
133 Ga0466966_0113446 3300044684 Bacteria 1669
134 Ga0466961_0001710 3300044693 Bacteria 13667
135 Ga0466961_0003338 3300044693 Bacteria 10019
136 Ga0466961_0010801 3300044693 Bacteria 5832
137 Ga0466963_0008231 3300044694 Bacteria 6249
138 Ga0466963_0014029 3300044694 Bacteria 4936
139 Ga0466963_0014609 3300044694 Bacteria 4846
140 Ga0466963_0190805 3300044694 Bacteria 1431
141 Ga0466964_0001285 3300044706 Bacteria 8567
142 Ga0466971_0030691 3300044719 Bacteria 2406
143 Ga0466970_0015149 3300044765 Bacteria 3965
144 Ga0466970_0042584 3300044765 Bacteria 2415
145 Ga0466957_0001021 3300044842 Bacteria 14441
146 Ga0466957_0032564 3300044842 Bacteria 3122
147 Ga0466957_0035924 3300044842 Bacteria 2976
148 Ga0466957_0053620 3300044842 Bacteria 2459
149 Ga0466957_0057947 3300044842 Bacteria 2372
150 Ga0466960_0004151 3300044901 Bacteria 5639
151 Ga0466960_0007007 3300044901 Bacteria 4553
152 Ga0466960_0079126 3300044901 Bacteria 1652
153 Ga0466958_0014780 3300045836 Bacteria 4460
154 Ga0466958_0023834 3300045836 Bacteria 3597
155 Ga0466958_0086392 3300045836 Bacteria 1936
156 Ga0466958_0154989 3300045836 Bacteria 1446
157 Ga0466967_0002225 3300045976 Bacteria 11936
158 Ga0466967_0006548 3300045976 Bacteria 8261
159 Ga0466967_0017392 3300045976 Bacteria 5706
160 Ga0466967_0022906 3300045976 Bacteria 5107
161 Ga0466967_0026189 3300045976 Bacteria 4825
162 Ga0466967_0027871 3300045976 Bacteria 4706
163 Ga0466967_0074218 3300045976 Bacteria 3054
164 Ga0466967_0099242 3300045976 Bacteria 2659
165 Ga0466967_0161950 3300045976 Bacteria 2100
166 Ga0466967_0248809 3300045976 Bacteria 1697
167 Ga0495653_0133163 3300046463 Bacteria 1757
168 Ga0495630_0071791 3300046517 Bacteria 2606
169 Ga0495632_0022509 3300046519 Bacteria 3377
170 Ga0495657_0061681 3300046675 Bacteria 2480
171 Ga0496100_0016299 3300048903 Bacteria 4360
172 Ga0496100_0091710 3300048903 Bacteria 2074
173 Ga0496100_0094990 3300048903 Bacteria 2043
174 Ga0496101_0004065 3300048904 Bacteria 9147
175 Ga0496101_0098667 3300048904 Bacteria 2183
176 Ga0496102_0000013 3300048905 Bacteria 311668
177 Ga0496102_0000319 3300048905 Bacteria 60314
178 Ga0496102_0006956 3300048905 Bacteria 9652
179 Ga0496102_0059053 3300048905 Bacteria 3506
180 Ga0496102_0122183 3300048905 Bacteria 2433
181 Ga0496102_0126292 3300048905 Bacteria 2391
182 Ga0496102_0206249 3300048905 Bacteria 1853
183 Ga0496102_0238141 3300048905 Bacteria 1716
184 Ga0496102_0319748 3300048905 Bacteria 1462
185 Ga0496103_0000231 3300048906 Bacteria 54600
186 Ga0496103_0009268 3300048906 Bacteria 5833
187 Ga0496103_0012262 3300048906 Bacteria 5087
188 Ga0496104_0018385 3300048907 Bacteria 6377
189 Ga0496104_0019957 3300048907 Bacteria 6137
190 Ga0496104_0039962 3300048907 Bacteria 4395
191 Ga0496104_0093355 3300048907 Bacteria 2878
192 Ga0496104_0101321 3300048907 Bacteria 2757
193 Ga0496104_0104109 3300048907 Bacteria 2719
194 Ga0496104_0141584 3300048907 Bacteria 2310
195 Ga0496105_0000987 3300048908 Bacteria 19605
196 Ga0496105_0031286 3300048908 Bacteria 4363
197 Ga0496105_0101361 3300048908 Bacteria 2378
198 Ga0496106_0008208 3300048909 Bacteria 7718
199 Ga0496106_0064425 3300048909 Bacteria 2788
200 Ga0496107_0142968 3300048910 Bacteria 1768
201 Ga0496108_0000102 3300048911 Bacteria 88979
202 Ga0496108_0045688 3300048911 Bacteria 3658
203 Ga0496108_0063204 3300048911 Bacteria 3117
204 Ga0496108_0073019 3300048911 Bacteria 2897
205 Ga0496109_0003960 3300048912 Bacteria 12367
206 Ga0496109_0020820 3300048912 Bacteria 5794
207 Ga0496109_0069166 3300048912 Bacteria 3237
208 Ga0496109_0099836 3300048912 Bacteria 2693
209 Ga0496109_0162599 3300048912 Bacteria 2092
210 Ga0496109_0172204 3300048912 Bacteria 2031
211 Ga0496110_0012699 3300048913 Bacteria 6932
212 Ga0496110_0013498 3300048913 Bacteria 6758
213 Ga0496110_0015419 3300048913 Bacteria 6359
214 Ga0496110_0024627 3300048913 Bacteria 5132
215 Ga0496110_0089956 3300048913 Bacteria 2744
216 Ga0496110_0221688 3300048913 Bacteria 1720
217 Ga0496111_0047849 3300048914 Bacteria 3080
218 Ga0496111_0134758 3300048914 Bacteria 1829
219 Ga0496113_0019010 3300048916 Bacteria 4798
220 Ga0496113_0030826 3300048916 Bacteria 3886
221 Ga0496113_0143566 3300048916 Bacteria 1879
222 Ga0496114_0003588 3300048917 Bacteria 11923
223 Ga0496114_0023692 3300048917 Bacteria 5009
224 Ga0496114_0061501 3300048917 Bacteria 3141
225 Ga0496114_0085641 3300048917 Bacteria 2669
226 Ga0496114_0087216 3300048917 Bacteria 2646
227 Ga0496114_0091147 3300048917 Bacteria 2588
228 Ga0496114_0098958 3300048917 Bacteria 2487
229 Ga0496115_0043259 3300048918 Bacteria 3592
230 Ga0496115_0159759 3300048918 Bacteria 1862
231 Ga0496118_0010061 3300048921 Bacteria 9421
232 Ga0496119_0000892 3300048922 Bacteria 39075
233 Ga0496120_0002612 3300048923 Bacteria 17853
234 Ga0496121_0022635 3300048924 Bacteria 6084
235 Ga0501031_0002631 3300049568 Bacteria 11425
236 Ga0501031_0092734 3300049568 Bacteria 1971
237 Ga0501032_0022506 3300049569 Bacteria 4368
238 Ga0501032_0022720 3300049569 Bacteria 4346
239 Ga0501033_0043640 3300049570 Bacteria 3339
240 Ga0501033_0111752 3300049570 Bacteria 1988
241 Ga0501034_0000724 3300049571 Bacteria 50070
242 Ga0501036_0004078 3300049572 Bacteria 11751
243 Ga0501038_0009149 3300049574 Bacteria 9090
244 Ga0501039_0001008 3300049575 Bacteria 20519
245 Ga0501040_0108351 3300049576 Bacteria 1942
246 Ga0501041_0011357 3300049577 Bacteria 5263
247 Ga0501042_0007383 3300049578 Bacteria 7199
248 Ga0501042_0087678 3300049578 Bacteria 2233
249 Ga0501043_0090523 3300049579 Bacteria 2405
250 Ga0501046_0007994 3300049580 Bacteria 9247
251 Ga0501047_0021250 3300049581 Bacteria 6230
252 Ga0501047_0069583 3300049581 Bacteria 3389
253 Ga0501048_0003895 3300049582 Bacteria 11349
254 Ga0501048_0007611 3300049582 Bacteria 8211
255 Ga0501048_0018512 3300049582 Bacteria 5120
256 Ga0501071_0005751 3300049587 Bacteria 8000
257 Ga0501072_0092295 3300049588 Bacteria 2405
258 Ga0501075_0007950 3300049591 Bacteria 7366
259 Ga0501076_0015996 3300049592 Bacteria 5679
260 Ga0501076_0094051 3300049592 Bacteria 2413
261 Ga0501077_0015731 3300049593 Bacteria 4765
262 Ga0501080_0046440 3300049742 Bacteria 4043
263 Ga0501080_0386132 3300049742 Bacteria 1261
264 Ga0501081_0030893 3300049743 Bacteria 3629
265 Ga0501035_0049193 3300049822 Bacteria 3779
266 Ga0501035_0137616 3300049822 Bacteria 2125
267 Ga0501044_0052726 3300049823 Bacteria 4189
268 Ga0501044_0069291 3300049823 Bacteria 3591
269 Ga0501044_0077624 3300049823 Bacteria 3368
270 Ga0501045_0000128 3300049824 Bacteria 39951
271 Ga0501045_0082341 3300049824 Bacteria 2373
272 nmdc:mga03n38_43712_c1 3300050490 Bacteria 1964
273 nmdc:mga03n38_8291_c1 3300050490 Bacteria 3722
274 nmdc:mga05p37_426240_c1 3300050507 Bacteria 1542
275 nmdc:mga05p37_9995_c1 3300050507 Bacteria 11268
276 nmdc:mga06r32_13000_c1 3300050510 Bacteria 7530
277 Ga0495619_0021983 3300053085 Bacteria 4077
278 Ga0500588_0005436 3300053146 Bacteria 2832
279 Ga0500604_0021888 3300053151 Bacteria 1811
280 Ga0500616_0000957 3300053153 Bacteria 31283
281 Ga0500616_0001329 3300053153 Bacteria 24315
282 Ga0501084_0008244 3300054114 Bacteria 8594
283 Ga0501082_0028443 3300060353 Bacteria 4815
284 Ga0466962_0000651 3300061719 Bacteria 15399
285 Ga0466962_0012651 3300061719 Bacteria 4061
286 Ga0530510_0005895 3300061734 Bacteria 8492
287 Ga0530510_0106028 3300061734 Bacteria 2057
288 2842135404 2842134933 Bacteria 5847019
289 2643851748 2643221567 Bacteria 4163945
290 2644102073 2643221617 Bacteria 5139111
291 2644115296 2643221620 Bacteria 5134593
292 2644137662 2643221624 Bacteria 4384879
293 2644609806 2643221711 Bacteria 4865335
294 2753270464 2751185782 Bacteria 11227053
295 2808872485 2808606365 Bacteria 4301966
296 2812374968 2811994882 Bacteria 4688362
297 2816506769 2816332139 Bacteria 9138787
298 2819427713 2818991318 Bacteria 5266538
299 2819666563 2818991458 Bacteria 4794049
300 2819691725 2818991462 Bacteria 4320267
301 2819729503 2818991469 Bacteria 4644110
302 2904501239 2904497146 Bacteria 4731781
303 2919448801 2919446982 Bacteria 3994487
304 2941494466 2941489479 Bacteria 6313767
305 2995953519 2995948881 Bacteria 6358104
306 3001889777 3001889506 Bacteria 2975194
307 8002812181 8002811521 Bacteria 2942897
308 8003015536 8003014200 Bacteria 4059994
309 JGI24735J21928_10002871
310 JGI24735J21928_10027954
311 Ga0055537_1000002
312 Ga0055524_1000002
313 Ga0055534_1000005
314 Ga0055528_1000001
315 Ga0070658_10137186
316 Ga0070683_100009309
317 Ga0070660_100029755
318 Ga0070668_100034668
319 Ga0070659_100070772
320 Ga0070714_100000498
321 Ga0070678_100101980
322 Ga0070662_100121088
323 Ga0070707_100238753
324 Ga0070684_100000608
325 Ga0070696_100057141
326 Ga0068855_100019945
327 Ga0068855_100314835
328 Ga0070664_100090159
329 Ga0068856_100125335
330 Ga0070702_100000621
331 Ga0068859_100026666
332 Ga0068863_100231154
333 Ga0068858_100060852
334 Ga0068860_100025188
335 Ga0068860_100040925
336 Ga0081455_10000018
337 Ga0081455_10043632
338 Ga0075368_10000426
339 Ga0075363_100000654
340 Ga0075367_10018727
341 Ga0075428_100050600
342 Ga0097620_100026666
343 Ga0105245_10001813
344 Ga0105247_10001818
345 Ga0105247_10091136
346 Ga0114129_10000457
347 Ga0114129_10087560
348 Ga0114129_10252542
349 Ga0105243_10011257
350 Ga0105248_10016571
351 Ga0105248_10145563
352 Ga0105238_10079890
353 Ga0105239_10002393
354 Ga0105246_10002116
355 Ga0157369_10263659
356 Ga0163162_10031261
357 Ga0157372_10032234
358 Ga0157375_10005200
359 Ga0157375_10222360
360 Ga0163163_10005644
361 Ga0163163_10091367
362 Ga0163163_10154249
363 Ga0157380_10169005
364 Ga0157377_10032592
365 Ga0157379_10026192
366 Ga0157379_10066815
367 Ga0183360_10003
368 Ga0197907_10260063
369 Ga0206353_10218470
370 Ga0206353_11597542
371 Ga0209759_1000660
372 Ga0209565_1000002
373 Ga0209673_1000002
374 Ga0209675_1000002
375 Ga0209564_1000004
376 Ga0209256_1000004
377 Ga0209257_1006163
378 Ga0207710_10001397
379 Ga0207688_10008504
380 Ga0207688_10008763
381 Ga0207647_10032128
382 Ga0207695_10153560
383 Ga0207671_10169430
384 Ga0207657_10028713
385 Ga0207652_10234034
386 Ga0207694_10051784
387 Ga0207687_10028519
388 Ga0207686_10053501
389 Ga0207709_10031944
390 Ga0207709_10154146
391 Ga0207711_10058784
392 Ga0207711_10082782
393 Ga0207689_10066432
394 Ga0207661_10017972
395 Ga0207661_10094140
396 Ga0207658_10024816
397 Ga0207703_10020827
398 Ga0207702_10032996
399 Ga0207641_10070243
400 Ga0207641_10197260
401 Ga0207674_10047673
402 Ga0207683_10087393
403 Ga0207683_10169611
404 Ga0207698_10190433
405 Ga0209813_10028223
406 Ga0268264_10029046
407 Ga0268264_10033829
408 Ga0265328_10017213
409 Ga0265314_10024449
410 Ga0307405_10027792
411 Ga0307405_10032521
412 Ga0307413_10147486
413 Ga0307410_10003180
414 Ga0307410_10019927
415 Ga0307407_10043124
416 Ga0307409_100004467
417 Ga0307409_100068991
418 Ga0307416_100005767
419 Ga0307416_100025714
420 Ga0307416_100218682
421 Ga0307415_100000029
422 Ga0307415_100058618
423 Ga0373942_0011674
424 Ga0316574_0097789
425 Ga0373947_0127555
426 Ga0373937_0201526
427 Ga0395900_0055864
428 Ga0395898_0001900
429 Ga0436364_1474689
430 Ga0395901_0009779
431 Ga0395901_0051561
432 Ga0436365_1483491
433 Ga0439442_002127
434 Ga0439449_0006197
435 Ga0439462_0006145
436 Ga0466969_0052634
437 Ga0466969_0075521
438 Ga0466972_0026315
439 Ga0466966_0036271
440 Ga0466966_0092796
441 Ga0466966_0113446
442 Ga0466961_0001710
443 Ga0466961_0003338
444 Ga0466961_0010801
445 Ga0466963_0008231
446 Ga0466963_0014029
447 Ga0466963_0014609
448 Ga0466963_0190805
449 Ga0466964_0001285
450 Ga0466971_0030691
451 Ga0466970_0015149
452 Ga0466970_0042584
453 Ga0466957_0001021
454 Ga0466957_0032564
455 Ga0466957_0035924
456 Ga0466957_0053620
457 Ga0466957_0057947
458 Ga0466960_0004151
459 Ga0466960_0007007
460 Ga0466960_0079126
461 Ga0466958_0014780
462 Ga0466958_0023834
463 Ga0466958_0086392
464 Ga0466958_0154989
465 Ga0466967_0002225
466 Ga0466967_0006548
467 Ga0466967_0017392
468 Ga0466967_0022906
469 Ga0466967_0026189
470 Ga0466967_0027871
471 Ga0466967_0074218
472 Ga0466967_0099242
473 Ga0466967_0161950
474 Ga0466967_0248809
475 Ga0495653_0133163
476 Ga0495630_0071791
477 Ga0495632_0022509
478 Ga0495657_0061681
479 Ga0496100_0016299
480 Ga0496100_0091710
481 Ga0496100_0094990
482 Ga0496101_0004065
483 Ga0496101_0098667
484 Ga0496102_0000013
485 Ga0496102_0000319
486 Ga0496102_0006956
487 Ga0496102_0059053
488 Ga0496102_0122183
489 Ga0496102_0126292
490 Ga0496102_0206249
491 Ga0496102_0238141
492 Ga0496102_0319748
493 Ga0496103_0000231
494 Ga0496103_0009268
495 Ga0496103_0012262
496 Ga0496104_0018385
497 Ga0496104_0019957
498 Ga0496104_0039962
499 Ga0496104_0093355
500 Ga0496104_0101321
501 Ga0496104_0104109
502 Ga0496104_0141584
503 Ga0496105_0000987
504 Ga0496105_0031286
505 Ga0496105_0101361
506 Ga0496106_0008208
507 Ga0496106_0064425
508 Ga0496107_0142968
509 Ga0496108_0000102
510 Ga0496108_0045688
511 Ga0496108_0063204
512 Ga0496108_0073019
513 Ga0496109_0003960
514 Ga0496109_0020820
515 Ga0496109_0069166
516 Ga0496109_0099836
517 Ga0496109_0162599
518 Ga0496109_0172204
519 Ga0496110_0012699
520 Ga0496110_0013498
521 Ga0496110_0015419
522 Ga0496110_0024627
523 Ga0496110_0089956
524 Ga0496110_0221688
525 Ga0496111_0047849
526 Ga0496111_0134758
527 Ga0496113_0019010
528 Ga0496113_0030826
529 Ga0496113_0143566
530 Ga0496114_0003588
531 Ga0496114_0023692
532 Ga0496114_0061501
533 Ga0496114_0085641
534 Ga0496114_0087216
535 Ga0496114_0091147
536 Ga0496114_0098958
537 Ga0496115_0043259
538 Ga0496115_0159759
539 Ga0496118_0010061
540 Ga0496119_0000892
541 Ga0496120_0002612
542 Ga0496121_0022635
543 Ga0501031_0002631
544 Ga0501031_0092734
545 Ga0501032_0022506
546 Ga0501032_0022720
547 Ga0501033_0043640
548 Ga0501033_0111752
549 Ga0501034_0000724
550 Ga0501036_0004078
551 Ga0501038_0009149
552 Ga0501039_0001008
553 Ga0501040_0108351
554 Ga0501041_0011357
555 Ga0501042_0007383
556 Ga0501042_0087678
557 Ga0501043_0090523
558 Ga0501046_0007994
559 Ga0501047_0021250
560 Ga0501047_0069583
561 Ga0501048_0003895
562 Ga0501048_0007611
563 Ga0501048_0018512
564 Ga0501071_0005751
565 Ga0501072_0092295
566 Ga0501075_0007950
567 Ga0501076_0015996
568 Ga0501076_0094051
569 Ga0501077_0015731
570 Ga0501080_0046440
571 Ga0501080_0386132
572 Ga0501081_0030893
573 Ga0501035_0049193
574 Ga0501035_0137616
575 Ga0501044_0052726
576 Ga0501044_0069291
577 Ga0501044_0077624
578 Ga0501045_0000128
579 Ga0501045_0082341
580 nmdc:mga03n38_43712_c1
581 nmdc:mga03n38_8291_c1
582 nmdc:mga05p37_426240_c1
583 nmdc:mga05p37_9995_c1
584 nmdc:mga06r32_13000_c1
585 Ga0495619_0021983
586 Ga0500588_0005436
587 Ga0500604_0021888
588 Ga0500616_0000957
589 Ga0500616_0001329
590 Ga0501084_0008244
591 Ga0501082_0028443
592 Ga0466962_0000651
593 Ga0466962_0012651
594 Ga0530510_0005895
595 Ga0530510_0106028
596 2842135404
597 2643851748
598 2644102073
599 2644115296
600 2644137662
601 2644609806
602 2753270464
603 2808872485
604 2812374968
605 2816506769
606 2819427713
607 2819666563
608 2819691725
609 2819729503
610 2904501239
611 2919448801
612 2941494466
613 2995953519
614 3001889777
615 8002812181
616 8003015536

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00202

Aminotran_3

Aminotransferase class-III

33

448

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jix-assembly2.cif.gz_C the cyrstal structure of taurine:2-oxoglutarate aminotransferase from bifidobacterium kashiwanohense, in complex with plp and glutamate 0.9591 11 452
6s54-assembly1.cif.gz_C transaminase from pseudomonas fluorescens 0.9526 17 445
6jix-assembly2.cif.gz_C the cyrstal structure of taurine:2-oxoglutarate aminotransferase from bifidobacterium kashiwanohense, in complex with plp and glutamate 0.9485 11 452
6io1-assembly1.cif.gz_B crystal structure of a novel thermostable (s)-enantioselective omega-transaminase from thermomicrobium roseum 0.9459 13 447
7q9x-assembly1.cif.gz_AAA crystal structure of chromobacterium violaceum aminotransferase in complex with plp-pyruvate adduct 0.943 11 449
ID Description Score Start End Superfamily
af_Q2FVJ6_341_444_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9694 333 443 3.90.1150.10
af_Q1ZXC3_114_383_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9621 73 338 3.40.640.10
af_O53379_75_342_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9617 70 327 3.40.640.10
3hmuB02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9608 70 334 3.40.640.10
af_Q2FVJ6_359_446_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9565 354 445 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A6J6KBC4-F1-model_v4 Unannotated protein 0.9931 251 453 GO:0005829
GO:0008483
GO:0030170
AF-A0A0Q8YG56-F1-model_v4 Aminotransferase class III 0.9923 11 452 GO:0005829
GO:0008483
GO:0030170
AF-A0A1M5AA25-F1-model_v4 Taurine---2-oxoglutarate transaminase 0.9883 10 454 GO:0005829
GO:0008483
GO:0030170
AF-A0A0Q8YG56-F1-model_v4 Aminotransferase class III 0.9857 11 452 GO:0005829
GO:0008483
GO:0030170
AF-A0A259SEV8-F1-model_v4 Aspartate aminotransferase family protein 0.9853 54 452 GO:0005829
GO:0008483
GO:0030170

Map