F399948

General Info

Members Datasets Scaffolds Average Seq Length
308 231 616 289

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2582581312|2585301018
Length 332
Sequence IRRGGTCGQVPHTMRHMGDVLAGIHATWEFDTDSVLVRFERGIRTPKLFQSLRERRIPHAALSSVTLTPGKRGTVVLHAVPRPGADPLLEAAAGQLKDGCDPYRLVLPAERETLADYYADELRALLGPDAGEPAERFMVAAPEAPMQFKAYDGRASFDGDRISFRWFWTGASTAKWKAGDQTFPVTELSGVEWRSPEAFDGYLRLVPRGAEGAGSLAGAERNAERGTPRTDAAPGPQAMIPRPTQADQDPAAVIFGLGYGPVHESLPFAAAVLESVRRKQSAPGTAAAVPGAGRRDPADIAERIRHLGELHRAGLVTDDEFSAKKAQLLAEL

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
6 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
7 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
8 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
9 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
10 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
11 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
12 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
13 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
14 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
15 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
16 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
17 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
21 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
22 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
23 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
24 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
25 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
26 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
27 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
28 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
29 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
30 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
31 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
32 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
33 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
34 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
35 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
36 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
37 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
38 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
39 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
40 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
41 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
42 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
43 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
44 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
45 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
46 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
47 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
48 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
49 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
50 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
51 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
52 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
53 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
54 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
55 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
58 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
59 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
60 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
61 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
62 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
63 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
64 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
65 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
66 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
67 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
68 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
69 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
70 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
71 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
72 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
73 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
74 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
75 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
76 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
77 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
78 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
79 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
80 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
81 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
82 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
83 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
84 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
85 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
86 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
87 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
88 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
89 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
92 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
93 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
94 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
95 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
96 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
97 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
98 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
99 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
100 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
101 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
102 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
103 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
104 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
105 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
106 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
107 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
108 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
111 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
112 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
113 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
117 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
118 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
119 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
120 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
121 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
122 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
125 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
126 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
145 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
146 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
147 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
148 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
149 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
150 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
151 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
152 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
153 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
154 2643221548 Streptomyces sp. Root55 Isolate Unclassified
155 2643221578 Streptomyces sp. Root63 Isolate Unclassified
156 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
157 2643221647 Streptomyces sp. Root369 Isolate Unclassified
158 2643221670 Streptomyces sp. Root431 Isolate Unclassified
159 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
160 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
161 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
162 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
163 2643221714 Streptomyces sp. Root264 Isolate Unclassified
164 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
165 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
166 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
167 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
168 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
169 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
170 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
171 2808606448 Streptomyces sp. 193411 Isolate Unclassified
172 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
173 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
174 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
175 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
176 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
177 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
178 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
179 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
180 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
181 2862574272 Streptomyces sp. AcE210 Isolate Nodule
182 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
183 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
184 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
185 2867369537 Streptomyces sp. Z26 Isolate Unclassified
186 2867428634 Streptomyces sp. RP5T Isolate Unclassified
187 2867475112 Streptomyces sp. TM32 Isolate Unclassified
188 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
189 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
190 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
191 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
192 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
193 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
194 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
195 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
196 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
197 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
198 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
199 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
200 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
201 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
202 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
203 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
204 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
205 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
206 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
207 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
208 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
209 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
210 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
211 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
212 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
213 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
214 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
215 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
216 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
217 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
218 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
219 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
220 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
221 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
222 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
223 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
224 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
225 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
226 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
227 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
228 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
229 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
230 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
231 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.73
Metatranscriptomes 0
Isolates 27.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.9
Nodule 1.3
Rhizoplane 0.97
Rhizosphere 75.65
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10046216 3300003316 Bacteria 1734
2 rootH2_10002228 3300003320 Bacteria 1535
3 rootH2_10002239 3300003320 Bacteria 2264
4 rootL2_10109316 3300003322 Bacteria 3578
5 JGI25160J50197_1018788 3300003354 Bacteria 2141
6 Ga0075363_100037559 3300006048 Bacteria 2544
7 Ga0075367_10000490 3300006178 Bacteria 14834
8 Ga0075370_10156328 3300006353 Bacteria 1337
9 Ga0099826_10047177 3300006948 Bacteria 2930
10 Ga0105251_10021931 3300009011 Bacteria 3325
11 Ga0105243_10062330 3300009148 Bacteria 2985
12 Ga0182008_10001369 3300014497 Bacteria 16527
13 Ga0182007_10000387 3300015262 Bacteria 27336
14 Ga0182005_1031012 3300015265 Bacteria 1456
15 Ga0183367_1009 3300015688 Bacteria 484598
16 Ga0209758_1004639 3300025297 Bacteria 11260
17 Ga0207426_1002223 3300025302 Bacteria 12988
18 Ga0207426_1002269 3300025302 Bacteria 12687
19 Ga0207713_1019361 3300025735 Bacteria 3331
20 Ga0207694_10092652 3300025924 Bacteria 2385
21 Ga0209371_1021218 3300027312 Bacteria 1580
22 Ga0307517_10001523 3300028786 Bacteria 38580
23 Ga0307515_10000262 3300028794 Bacteria 130525
24 Ga0307515_10208223 3300028794 Bacteria 1808
25 Ga0268256_1023859 3300030500 Bacteria 1580
26 Ga0307511_10001166 3300030521 Bacteria 27969
27 Ga0307512_10003287 3300030522 Bacteria 19019
28 Ga0307513_10045626 3300031456 Bacteria 4788
29 Ga0307513_10253588 3300031456 Bacteria 1554
30 Ga0307509_10022428 3300031507 Bacteria 7117
31 Ga0307509_10062314 3300031507 Bacteria 3933
32 Ga0307508_10011423 3300031616 Bacteria 8119
33 Ga0307508_10033750 3300031616 Bacteria 4617
34 Ga0307514_10107104 3300031649 Bacteria 1992
35 Ga0307518_10086286 3300031838 Bacteria 2262
36 Ga0307507_10013124 3300033179 Bacteria 10115
37 Ga0307510_10105211 3300033180 Bacteria 2591
38 Ga0395898_0004836 3300037466 Bacteria 14644
39 Ga0395898_0005281 3300037466 Bacteria 13965
40 Ga0395901_0048599 3300038443 Bacteria 4406
41 Ga0439436_0012370 3300041404 Bacteria 2591
42 Ga0439436_0037058 3300041404 Bacteria 1405
43 Ga0439439_0001716 3300041406 Bacteria 4461
44 Ga0451802_0540992 3300041460 Bacteria 2061
45 Ga0451853_0673861 3300041512 Bacteria 4138
46 Ga0451853_1467013 3300041512 Bacteria 6791
47 Ga0439433_0003389 3300041999 Bacteria 3419
48 Ga0439433_0004384 3300041999 Bacteria 3043
49 Ga0439448_0031170 3300042005 Bacteria 1693
50 Ga0439448_0068601 3300042005 Bacteria 1179
51 Ga0439449_0004065 3300042007 Bacteria 5661
52 Ga0439455_0000309 3300042012 Bacteria 6130
53 Ga0439457_000026 3300042014 Bacteria 29814
54 Ga0439457_003321 3300042014 Bacteria 4393
55 Ga0439462_0017497 3300042015 Bacteria 1856
56 Ga0450894_000854 3300042131 Bacteria 4867
57 Ga0450896_006511 3300042133 Bacteria 1602
58 Ga0450899_002405 3300042135 Bacteria 2026
59 Ga0450903_000036 3300042138 Bacteria 26817
60 Ga0450906_000131 3300042145 Bacteria 13303
61 Ga0439458_0003087 3300042157 Bacteria 3966
62 Ga0450901_002311 3300042533 Bacteria 2073
63 Ga0466969_0029155 3300044656 Bacteria 2820
64 Ga0466972_0055488 3300044658 Bacteria 1905
65 Ga0466965_0021078 3300044683 Bacteria 3136
66 Ga0466966_0006730 3300044684 Bacteria 7611
67 Ga0466961_0007594 3300044693 Bacteria 6906
68 Ga0466961_0017365 3300044693 Bacteria 4622
69 Ga0466961_0306164 3300044693 Bacteria 970
70 Ga0466963_0000176 3300044694 Bacteria 26457
71 Ga0466963_0000196 3300044694 Bacteria 25509
72 Ga0466963_0030588 3300044694 Bacteria 3476
73 Ga0466964_0048569 3300044706 Bacteria 1736
74 Ga0466971_0001262 3300044719 Bacteria 10539
75 Ga0466970_0012379 3300044765 Bacteria 4361
76 Ga0466970_0146986 3300044765 Bacteria 1301
77 Ga0466957_0020111 3300044842 Bacteria 3929
78 Ga0466957_0146885 3300044842 Bacteria 1522
79 Ga0466960_0005897 3300044901 Bacteria 4884
80 Ga0466959_0045444 3300045049 Bacteria 3234
81 Ga0466958_0030144 3300045836 Bacteria 3219
82 Ga0466967_0007755 3300045976 Bacteria 7787
83 Ga0495627_027382 3300046453 Bacteria 1830
84 Ga0495592_0004397 3300046454 Bacteria 10307
85 Ga0495592_0018198 3300046454 Bacteria 5339
86 Ga0495603_0001858 3300046455 Bacteria 12437
87 Ga0495603_0002751 3300046455 Bacteria 10361
88 Ga0495603_0003796 3300046455 Bacteria 8994
89 Ga0495603_0009960 3300046455 Bacteria 5751
90 Ga0495603_0016347 3300046455 Bacteria 4488
91 Ga0495629_0003234 3300046459 Bacteria 12340
92 Ga0495629_0005216 3300046459 Bacteria 9730
93 Ga0495629_0006991 3300046459 Bacteria 8314
94 Ga0495629_0018283 3300046459 Bacteria 5019
95 Ga0495629_0019173 3300046459 Bacteria 4889
96 Ga0495638_0017958 3300046460 Bacteria 4708
97 Ga0495641_0058379 3300046461 Bacteria 1746
98 Ga0495651_0003483 3300046462 Bacteria 12065
99 Ga0495651_0294258 3300046462 Bacteria 1091
100 Ga0495582_0028832 3300046473 Bacteria 3047
101 Ga0495605_0011292 3300046474 Bacteria 4988
102 Ga0495639_0019443 3300046475 Bacteria 2964
103 Ga0495664_0006519 3300046477 Bacteria 6452
104 Ga0495664_0042961 3300046477 Bacteria 2678
105 Ga0495585_0047508 3300046492 Bacteria 2390
106 Ga0495594_0000244 3300046499 Bacteria 26387
107 Ga0495594_0004011 3300046499 Bacteria 7575
108 Ga0495594_0008294 3300046499 Bacteria 5348
109 Ga0495594_0102045 3300046499 Bacteria 1614
110 Ga0495596_0028570 3300046500 Bacteria 2238
111 Ga0495607_0009347 3300046501 Bacteria 6639
112 Ga0495583_0064718 3300046506 Bacteria 1621
113 Ga0495606_0023291 3300046507 Bacteria 4491
114 Ga0495616_0128845 3300046513 Bacteria 1161
115 Ga0495620_0010780 3300046515 Bacteria 4806
116 Ga0495628_0020376 3300046516 Bacteria 5471
117 Ga0495630_0389887 3300046517 Bacteria 1067
118 Ga0495631_0045220 3300046518 Bacteria 1938
119 Ga0495643_0002819 3300046522 Bacteria 13260
120 Ga0495666_0014698 3300046526 Bacteria 3895
121 Ga0495654_0007990 3300046530 Bacteria 5875
122 Ga0495640_0008927 3300046533 Bacteria 7828
123 Ga0495640_0012492 3300046533 Bacteria 6485
124 Ga0495587_0001034 3300046536 Bacteria 18306
125 Ga0495609_0003917 3300046538 Bacteria 8348
126 Ga0495597_0049150 3300046542 Bacteria 1864
127 Ga0495645_0032102 3300046543 Bacteria 3829
128 Ga0495622_0007613 3300046557 Bacteria 5028
129 Ga0495622_0019731 3300046557 Bacteria 3138
130 Ga0495668_0079122 3300046616 Bacteria 1804
131 Ga0495634_0162292 3300046642 Bacteria 1408
132 Ga0495634_0201411 3300046642 Bacteria 1236
133 Ga0495625_0007730 3300046660 Bacteria 9297
134 Ga0495625_0014809 3300046660 Bacteria 6207
135 Ga0495625_0239893 3300046660 Bacteria 1180
136 Ga0495635_0000563 3300046663 Bacteria 23671
137 Ga0495635_0337138 3300046663 Bacteria 1007
138 Ga0495661_0011759 3300046665 Bacteria 5929
139 Ga0495588_0028317 3300046674 Bacteria 2803
140 Ga0495588_0033280 3300046674 Bacteria 2602
141 Ga0495657_0004129 3300046675 Bacteria 11629
142 Ga0495657_0005323 3300046675 Bacteria 10182
143 Ga0495657_0114190 3300046675 Bacteria 1707
144 Ga0495599_0127298 3300046678 Bacteria 1583
145 Ga0495599_0301049 3300046678 Bacteria 968
146 Ga0495623_0038920 3300046679 Bacteria 3040
147 Ga0495658_0002120 3300046683 Bacteria 10055
148 Ga0495613_0000689 3300046689 Bacteria 26707
149 Ga0495613_0012437 3300046689 Bacteria 6324
150 Ga0495613_0082705 3300046689 Bacteria 2331
151 Ga0495613_0105369 3300046689 Bacteria 2035
152 Ga0495649_0055912 3300046694 Bacteria 2131
153 Ga0495589_0016211 3300046794 Bacteria 3829
154 Ga0495589_0018080 3300046794 Bacteria 3617
155 Ga0495589_0025229 3300046794 Bacteria 3018
156 Ga0495600_0057968 3300046809 Bacteria 2529
157 Ga0495660_0040354 3300046810 Bacteria 2587
158 Ga0495581_0027697 3300047315 Bacteria 3287
159 Ga0495581_0041904 3300047315 Bacteria 2650
160 Ga0495604_0000177 3300047317 Bacteria 56559
161 Ga0495604_0041689 3300047317 Bacteria 3599
162 Ga0495636_0023783 3300047318 Bacteria 2482
163 Ga0495636_0033995 3300047318 Bacteria 2097
164 Ga0495636_0167183 3300047318 Bacteria 993
165 Ga0495676_0002684 3300047321 Bacteria 15938
166 Ga0495676_0002844 3300047321 Bacteria 15596
167 Ga0495676_0022395 3300047321 Bacteria 5496
168 Ga0495676_0031274 3300047321 Bacteria 4503
169 Ga0495676_0049330 3300047321 Bacteria 3385
170 Ga0495676_0080655 3300047321 Bacteria 2469
171 Ga0495676_0247807 3300047321 Bacteria 1216
172 Ga0495680_0019571 3300047322 Bacteria 5710
173 Ga0495683_0036900 3300047323 Bacteria 2479
174 Ga0495687_011361 3300047443 Bacteria 4797
175 Ga0495675_0015663 3300047444 Bacteria 4793
176 Ga0495675_0070443 3300047444 Bacteria 2207
177 Ga0495677_0007089 3300047445 Bacteria 4196
178 Ga0495685_003985 3300047447 Bacteria 4746
179 Ga0495685_007929 3300047447 Bacteria 3517
180 Ga0495685_030636 3300047447 Bacteria 1849
181 Ga0495681_0004558 3300047470 Bacteria 9443
182 Ga0495684_0091380 3300047471 Bacteria 2306
183 Ga0495686_0037389 3300047472 Bacteria 3110
184 Ga0495593_0000803 3300047673 Bacteria 18157
185 Ga0495593_0052889 3300047673 Bacteria 2144
186 Ga0495614_0000585 3300048089 Bacteria 15189
187 Ga0495614_0003178 3300048089 Bacteria 7336
188 Ga0495614_0079956 3300048089 Bacteria 1415
189 Ga0495614_0113334 3300048089 Bacteria 1191
190 Ga0495626_0016283 3300048091 Bacteria 3780
191 Ga0496106_0029728 3300048909 Bacteria 4074
192 Ga0496109_0015110 3300048912 Bacteria 6719
193 Ga0495682_0028295 3300049460 Bacteria 2078
194 Ga0501031_0034311 3300049568 Bacteria 3311
195 Ga0501031_0108597 3300049568 Bacteria 1812
196 Ga0501032_0113107 3300049569 Bacteria 1796
197 Ga0501032_0163366 3300049569 Bacteria 1462
198 Ga0501033_0128422 3300049570 Bacteria 1837
199 Ga0501034_0049044 3300049571 Bacteria 4261
200 Ga0501034_0051993 3300049571 Bacteria 4130
201 Ga0501034_0344118 3300049571 Bacteria 1421
202 Ga0501036_0060038 3300049572 Bacteria 3221
203 Ga0501037_0003381 3300049573 Bacteria 11596
204 Ga0501038_0016541 3300049574 Bacteria 6686
205 Ga0501038_0039741 3300049574 Bacteria 4114
206 Ga0501043_0060562 3300049579 Bacteria 2971
207 Ga0501047_0042009 3300049581 Bacteria 4418
208 Ga0501047_0220819 3300049581 Bacteria 1751
209 Ga0501047_0221218 3300049581 Bacteria 1749
210 Ga0501048_0008440 3300049582 Bacteria 7790
211 Ga0501070_0099181 3300049586 Bacteria 2410
212 Ga0501035_0183526 3300049822 Bacteria 1801
213 Ga0501035_0256847 3300049822 Bacteria 1482
214 Ga0501044_0020377 3300049823 Bacteria 7080
215 Ga0501044_0021565 3300049823 Bacteria 6869
216 Ga0501044_0039972 3300049823 Bacteria 4890
217 Ga0501044_0211283 3300049823 Bacteria 1894
218 Ga0501044_0346248 3300049823 Bacteria 1406
219 nmdc:mga03n38_17638_c1 3300050490 Bacteria 2800
220 nmdc:mga06z11_41378_c1 3300050494 Bacteria 2306
221 nmdc:mga07m45_140733_c1 3300050496 Bacteria 1397
222 nmdc:mga07m45_144342_c1 3300050496 Bacteria 1379
223 Ga0500640_150840 3300053095 Bacteria 887
224 Ga0466962_0008848 3300061719 Bacteria 4825
225 2585301018 2582581312 Bacteria 7308206
226 2547407794 2547132111 Bacteria 8013147
227 2554258753 2554235005 Bacteria 6457341
228 2585308400 2582581313 Bacteria 10042643
229 2616694629 2616644814 Bacteria 11555299
230 2616899736 2616644941 Bacteria 8510691
231 2643759576 2643221548 Bacteria 8053412
232 2643897648 2643221578 Bacteria 9213798
233 2643944882 2643221587 Bacteria 7586415
234 2644268880 2643221647 Bacteria 10741251
235 2644385169 2643221670 Bacteria 6497041
236 2644408794 2643221673 Bacteria 9196637
237 2644431781 2643221677 Bacteria 7584031
238 2644436099 2643221678 Bacteria 9540101
239 2644463008 2643221682 Bacteria 6743283
240 2644632038 2643221714 Bacteria 9015452
241 2768647270 2767802112 Bacteria 6465194
242 2784587651 2784132148 Bacteria 8627943
243 2785344623 2784746763 Bacteria 9783172
244 2785368276 2784746768 Bacteria 10036182
245 2786669276 2786546132 Bacteria 10419719
246 2808840925 2808606359 Bacteria 9866990
247 2808919508 2808606375 Bacteria 9466072
248 2809231217 2808606448 Bacteria 8656184
249 2811847949 2808606982 Bacteria 7791042
250 2812359269 2811994879 Bacteria 9313447
251 2812481438 2811994917 Bacteria 7761064
252 2819693849 2818991463 Bacteria 7948711
253 2852640785 2852635781 Bacteria 8251373
254 2862182682 2862178590 Bacteria 8583590
255 2862288396 2862281513 Bacteria 9621493
256 2862295884 2862290372 Bacteria 7471434
257 2862387468 2862382967 Bacteria 10317375
258 2862582608 2862574272 Bacteria 10567477
259 2862705256 2862705112 Bacteria 6563286
260 2863405887 2863404153 Bacteria 9672205
261 2867347335 2867346516 Bacteria 7608576
262 2867370884 2867369537 Bacteria 6501581
263 2867429526 2867428634 Bacteria 9590268
264 2867479608 2867475112 Bacteria 6909112
265 2873156758 2873151551 Bacteria 8625867
266 2875393599 2875391855 Bacteria 7600475
267 2877682301 2877676314 Bacteria 9512378
268 2912721199 2912715099 Bacteria 9460473
269 2912725224 2912723979 Bacteria 8557534
270 2912759764 2912757875 Bacteria 7940295
271 2918503626 2918501144 Bacteria 8668083
272 2919468411 2919468124 Bacteria 9133025
273 2946051084 2946045630 Bacteria 8527308
274 2946066615 2946064051 Bacteria 8957905
275 2946074888 2946072368 Bacteria 8999607
276 2947230578 2947224130 Bacteria 9938529
277 2954003994 2954002825 Bacteria 9173742
278 2954387432 2954380949 Bacteria 10050426
279 2954675739 2954673503 Bacteria 9685905
280 2954688525 2954682443 Bacteria 9862841
281 2954698266 2954691527 Bacteria 10720516
282 2954703962 2954701450 Bacteria 10834262
283 2954717286 2954711539 Bacteria 10867210
284 2954727254 2954721474 Bacteria 10456478
285 2954734538 2954731030 Bacteria 10243860
286 2954746160 2954740390 Bacteria 10229294
287 2954753435 2954749733 Bacteria 10366972
288 2954765127 2954759201 Bacteria 9358192
289 2966603477 2966598605 Bacteria 7676064
290 2990047750 2990044586 Bacteria 6603797
291 2990066719 2990059506 Bacteria 9321252
292 2990091440 2990088156 Bacteria 6657676
293 2997456352 2997451912 Bacteria 8492419
294 2997602205 2997600082 Bacteria 9896405
295 3006487183 3006486233 Bacteria 8157040
296 3006501946 3006493962 Bacteria 8825450
297 8008487526 8008485437 Bacteria 7198341
298 8008559236 8008558824 Bacteria 10610750
299 8008579817 8008574985 Bacteria 7815457
300 8023630424 8023623736 Bacteria 8593882
301 8025481312 8025478263 Bacteria 8209203
302 8025526954 8025524527 Bacteria 7197316
303 8025531156 8025530807 Bacteria 8495698
304 8048407980 8048406513 Bacteria 8936924
305 8054164955 8054160619 Bacteria 7783213
306 8056449454 8056447290 Bacteria 7680491
307 8056673409 8056667051 Bacteria 6953971
308 8056836713 8056829672 Bacteria 9045328
309 rootH1_10046216
310 rootH2_10002228
311 rootH2_10002239
312 rootL2_10109316
313 JGI25160J50197_1018788
314 Ga0075363_100037559
315 Ga0075367_10000490
316 Ga0075370_10156328
317 Ga0099826_10047177
318 Ga0105251_10021931
319 Ga0105243_10062330
320 Ga0182008_10001369
321 Ga0182007_10000387
322 Ga0182005_1031012
323 Ga0183367_1009
324 Ga0209758_1004639
325 Ga0207426_1002223
326 Ga0207426_1002269
327 Ga0207713_1019361
328 Ga0207694_10092652
329 Ga0209371_1021218
330 Ga0307517_10001523
331 Ga0307515_10000262
332 Ga0307515_10208223
333 Ga0268256_1023859
334 Ga0307511_10001166
335 Ga0307512_10003287
336 Ga0307513_10045626
337 Ga0307513_10253588
338 Ga0307509_10022428
339 Ga0307509_10062314
340 Ga0307508_10011423
341 Ga0307508_10033750
342 Ga0307514_10107104
343 Ga0307518_10086286
344 Ga0307507_10013124
345 Ga0307510_10105211
346 Ga0395898_0004836
347 Ga0395898_0005281
348 Ga0395901_0048599
349 Ga0439436_0012370
350 Ga0439436_0037058
351 Ga0439439_0001716
352 Ga0451802_0540992
353 Ga0451853_0673861
354 Ga0451853_1467013
355 Ga0439433_0003389
356 Ga0439433_0004384
357 Ga0439448_0031170
358 Ga0439448_0068601
359 Ga0439449_0004065
360 Ga0439455_0000309
361 Ga0439457_000026
362 Ga0439457_003321
363 Ga0439462_0017497
364 Ga0450894_000854
365 Ga0450896_006511
366 Ga0450899_002405
367 Ga0450903_000036
368 Ga0450906_000131
369 Ga0439458_0003087
370 Ga0450901_002311
371 Ga0466969_0029155
372 Ga0466972_0055488
373 Ga0466965_0021078
374 Ga0466966_0006730
375 Ga0466961_0007594
376 Ga0466961_0017365
377 Ga0466961_0306164
378 Ga0466963_0000176
379 Ga0466963_0000196
380 Ga0466963_0030588
381 Ga0466964_0048569
382 Ga0466971_0001262
383 Ga0466970_0012379
384 Ga0466970_0146986
385 Ga0466957_0020111
386 Ga0466957_0146885
387 Ga0466960_0005897
388 Ga0466959_0045444
389 Ga0466958_0030144
390 Ga0466967_0007755
391 Ga0495627_027382
392 Ga0495592_0004397
393 Ga0495592_0018198
394 Ga0495603_0001858
395 Ga0495603_0002751
396 Ga0495603_0003796
397 Ga0495603_0009960
398 Ga0495603_0016347
399 Ga0495629_0003234
400 Ga0495629_0005216
401 Ga0495629_0006991
402 Ga0495629_0018283
403 Ga0495629_0019173
404 Ga0495638_0017958
405 Ga0495641_0058379
406 Ga0495651_0003483
407 Ga0495651_0294258
408 Ga0495582_0028832
409 Ga0495605_0011292
410 Ga0495639_0019443
411 Ga0495664_0006519
412 Ga0495664_0042961
413 Ga0495585_0047508
414 Ga0495594_0000244
415 Ga0495594_0004011
416 Ga0495594_0008294
417 Ga0495594_0102045
418 Ga0495596_0028570
419 Ga0495607_0009347
420 Ga0495583_0064718
421 Ga0495606_0023291
422 Ga0495616_0128845
423 Ga0495620_0010780
424 Ga0495628_0020376
425 Ga0495630_0389887
426 Ga0495631_0045220
427 Ga0495643_0002819
428 Ga0495666_0014698
429 Ga0495654_0007990
430 Ga0495640_0008927
431 Ga0495640_0012492
432 Ga0495587_0001034
433 Ga0495609_0003917
434 Ga0495597_0049150
435 Ga0495645_0032102
436 Ga0495622_0007613
437 Ga0495622_0019731
438 Ga0495668_0079122
439 Ga0495634_0162292
440 Ga0495634_0201411
441 Ga0495625_0007730
442 Ga0495625_0014809
443 Ga0495625_0239893
444 Ga0495635_0000563
445 Ga0495635_0337138
446 Ga0495661_0011759
447 Ga0495588_0028317
448 Ga0495588_0033280
449 Ga0495657_0004129
450 Ga0495657_0005323
451 Ga0495657_0114190
452 Ga0495599_0127298
453 Ga0495599_0301049
454 Ga0495623_0038920
455 Ga0495658_0002120
456 Ga0495613_0000689
457 Ga0495613_0012437
458 Ga0495613_0082705
459 Ga0495613_0105369
460 Ga0495649_0055912
461 Ga0495589_0016211
462 Ga0495589_0018080
463 Ga0495589_0025229
464 Ga0495600_0057968
465 Ga0495660_0040354
466 Ga0495581_0027697
467 Ga0495581_0041904
468 Ga0495604_0000177
469 Ga0495604_0041689
470 Ga0495636_0023783
471 Ga0495636_0033995
472 Ga0495636_0167183
473 Ga0495676_0002684
474 Ga0495676_0002844
475 Ga0495676_0022395
476 Ga0495676_0031274
477 Ga0495676_0049330
478 Ga0495676_0080655
479 Ga0495676_0247807
480 Ga0495680_0019571
481 Ga0495683_0036900
482 Ga0495687_011361
483 Ga0495675_0015663
484 Ga0495675_0070443
485 Ga0495677_0007089
486 Ga0495685_003985
487 Ga0495685_007929
488 Ga0495685_030636
489 Ga0495681_0004558
490 Ga0495684_0091380
491 Ga0495686_0037389
492 Ga0495593_0000803
493 Ga0495593_0052889
494 Ga0495614_0000585
495 Ga0495614_0003178
496 Ga0495614_0079956
497 Ga0495614_0113334
498 Ga0495626_0016283
499 Ga0496106_0029728
500 Ga0496109_0015110
501 Ga0495682_0028295
502 Ga0501031_0034311
503 Ga0501031_0108597
504 Ga0501032_0113107
505 Ga0501032_0163366
506 Ga0501033_0128422
507 Ga0501034_0049044
508 Ga0501034_0051993
509 Ga0501034_0344118
510 Ga0501036_0060038
511 Ga0501037_0003381
512 Ga0501038_0016541
513 Ga0501038_0039741
514 Ga0501043_0060562
515 Ga0501047_0042009
516 Ga0501047_0220819
517 Ga0501047_0221218
518 Ga0501048_0008440
519 Ga0501070_0099181
520 Ga0501035_0183526
521 Ga0501035_0256847
522 Ga0501044_0020377
523 Ga0501044_0021565
524 Ga0501044_0039972
525 Ga0501044_0211283
526 Ga0501044_0346248
527 nmdc:mga03n38_17638_c1
528 nmdc:mga06z11_41378_c1
529 nmdc:mga07m45_140733_c1
530 nmdc:mga07m45_144342_c1
531 Ga0500640_150840
532 Ga0466962_0008848
533 2585301018
534 2547407794
535 2554258753
536 2585308400
537 2616694629
538 2616899736
539 2643759576
540 2643897648
541 2643944882
542 2644268880
543 2644385169
544 2644408794
545 2644431781
546 2644436099
547 2644463008
548 2644632038
549 2768647270
550 2784587651
551 2785344623
552 2785368276
553 2786669276
554 2808840925
555 2808919508
556 2809231217
557 2811847949
558 2812359269
559 2812481438
560 2819693849
561 2852640785
562 2862182682
563 2862288396
564 2862295884
565 2862387468
566 2862582608
567 2862705256
568 2863405887
569 2867347335
570 2867370884
571 2867429526
572 2867479608
573 2873156758
574 2875393599
575 2877682301
576 2912721199
577 2912725224
578 2912759764
579 2918503626
580 2919468411
581 2946051084
582 2946066615
583 2946074888
584 2947230578
585 2954003994
586 2954387432
587 2954675739
588 2954688525
589 2954698266
590 2954703962
591 2954717286
592 2954727254
593 2954734538
594 2954746160
595 2954753435
596 2954765127
597 2966603477
598 2990047750
599 2990066719
600 2990091440
601 2997456352
602 2997602205
603 3006487183
604 3006501946
605 8008487526
606 8008559236
607 8008579817
608 8023630424
609 8025481312
610 8025526954
611 8025531156
612 8048407980
613 8054164955
614 8056449454
615 8056673409
616 8056836713

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14472

DUF4429

Domain of unknown function (DUF4429)

28

123

0.98

PF09851

SHOCT

Short C-terminal domain

302

329

0.96

PF14472

DUF4429

Domain of unknown function (DUF4429)

155

273

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yf0-assembly1.cif.gz_A-2 human myotubularin related protein 6 (mtmr6) 0.7406 13 114
5i5h-assembly1.cif.gz_A ecoli global domain 245-586 0.7312 1 45
6xlp-assembly1.cif.gz_A structure of the essential inner membrane lipopolysaccharide-pbga complex 0.7157 1 45
5xy3-assembly1.cif.gz_k large subunit of trichomonas vaginalis ribosome 0.6573 48 116
5yqr-assembly1.cif.gz_A crystal structure of the ph-like domain of lam6 0.6228 131 228
ID Description Score Start End Superfamily
af_A4HUD3_241_414_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.776 131 173 1.20.140.150
af_Q4CN45_29_208_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.7392 131 173 1.20.140.150
2yf0A01 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.7346 13 112 2.30.29.30
af_A4HXE3_201_306_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.7259 139 194 2.30.29.30
af_G5ED24_341_459_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.6997 139 240 2.30.29.30
ID Description Score Start End GO Terms
AF-A0A7K2FKJ8-F1-model_v4 DUF4429 domain-containing protein 0.9838 4 228
AF-A0A7J0C2W1-F1-model_v4 DUF4429 domain-containing protein 0.9824 4 234
AF-A0A4S2UZ13-F1-model_v4 DUF4429 domain-containing protein 0.9797 4 243
AF-A0A4R4WLR6-F1-model_v4 DUF4429 domain-containing protein 0.9766 4 231
AF-A0A401R070-F1-model_v4 DUF4429 domain-containing protein 0.9761 1 239

Map