F399749

General Info

Members Datasets Scaffolds Average Seq Length
308 201 299 510

Family's Representative Sequence

Representative Sequence 3300028794|Ga0307515_10018912|Ga0307515_100189125
Length 452
Sequence VADALNPAEERSSVKRIELLVGLVGGLMPAILFALQSLASPSFRFALYAMVLLVGVLVGLEIPLVMRILKRQSGGGLKQLVSQVLTFDYLGALAVSIAFPLLLVPQLGLIRTGAFFGLLNAAVAVWALWLFRGELRRIGSHAIACALVIGALLAAFVGADRVTTWAEDRFYADTVLFSESTKYQRVVVTASAQGVRLFLNGNLQFHSRDEYRYHEALVHPAMAAQGAPKNVLVLGGGDGMAVREILKYPSVEHVTLVELDPRMTQLFSTQPLLRQLNRDALLSPKLQVVNADAFAWLEDGVGKSAGSYDVIVVDFPDPTNFSIGKLYTSSFYRLIDQHLSASGYAVVQTTSPLIARKSFWTVATTIEAAGLVTTPYHTHVPSFGEWGFILASRRPYRVPSALPEGLRFLSAADLPTLFNFPLDMARVPTEVNRLSNQVLVQTFEEEWGKVHQ

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
4 2643221585 Pelomonas sp. Root662 Isolate Unclassified
5 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
6 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
7 2643221656 Pelomonas sp. Root405 Isolate Unclassified
8 2738541337 Pelomonas sp. BT06 Isolate Unclassified
9 2831864461 Roseateles noduli HZ7 Isolate Nodule
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
23 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
24 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
31 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
36 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
37 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
38 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
39 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
40 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
41 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
56 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
57 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
58 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
59 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
64 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
65 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
66 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
67 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
71 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
84 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
131 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
132 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
135 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
136 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
137 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
138 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
139 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
140 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
141 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
142 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
143 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
144 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
145 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
146 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
147 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
148 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
149 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
150 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
151 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
152 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
153 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
154 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
155 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
156 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
157 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
158 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
159 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
160 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
161 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
162 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
163 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
164 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
165 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
166 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
167 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
168 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
169 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
170 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
171 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
172 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
173 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
174 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
175 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
176 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
177 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
178 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
179 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
180 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
181 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
182 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
183 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
184 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
185 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
186 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
187 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
188 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
189 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
190 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
191 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
192 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
193 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
194 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
195 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
196 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
197 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
198 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
199 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
200 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
201 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.08
Metatranscriptomes 0
Isolates 2.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.58
Nodule 1.62
Rhizoplane 4.87
Rhizosphere 70.78
Stem 0
Stem Tuber 0
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10000530 3300003322 Bacteria 100270
2 rootL2_10001264 3300003322 Bacteria 3485
3 Ga0055525_1000004 3300003759 Bacteria 888039
4 Ga0055526_1002103 3300003771 Bacteria 13664
5 Ga0055524_1000033 3300003775 Bacteria 180833
6 Ga0055524_1000781 3300003775 Bacteria 21321
7 Ga0055530_10003137 3300003791 Bacteria 9755
8 Ga0055540_1000371 3300003792 Bacteria 37810
9 Ga0055531_10000044 3300003794 Bacteria 133446
10 Ga0055531_10013432 3300003794 Bacteria 3773
11 Ga0065165_1000006 3300005262 Bacteria 352298
12 Ga0065165_1000884 3300005262 Bacteria 38667
13 Ga0070658_10045103 3300005327 Bacteria 3563
14 Ga0070676_10006013 3300005328 Bacteria 6479
15 Ga0070676_10015317 3300005328 Bacteria 4229
16 Ga0070676_10041948 3300005328 Bacteria 2655
17 Ga0070683_100011636 3300005329 Bacteria 7616
18 Ga0070683_100179666 3300005329 Bacteria 2008
19 Ga0070670_100033752 3300005331 Bacteria 4406
20 Ga0068869_100001012 3300005334 Bacteria 16348
21 Ga0068868_100000575 3300005338 Bacteria 24636
22 Ga0070660_100112050 3300005339 Bacteria 2171
23 Ga0070661_100002707 3300005344 Bacteria 12145
24 Ga0070661_100037257 3300005344 Bacteria 3537
25 Ga0070668_100022359 3300005347 Bacteria 4779
26 Ga0070675_100023617 3300005354 Bacteria 4918
27 Ga0070675_100055290 3300005354 Bacteria 3267
28 Ga0070675_100092871 3300005354 Bacteria 2530
29 Ga0070671_100009522 3300005355 Bacteria 7799
30 Ga0070671_100018121 3300005355 Bacteria 5717
31 Ga0070673_100002463 3300005364 Bacteria 11289
32 Ga0070659_100007229 3300005366 Bacteria 8060
33 Ga0070659_100025703 3300005366 Bacteria 4526
34 Ga0070667_100005605 3300005367 Bacteria 10486
35 Ga0070667_100025997 3300005367 Bacteria 4869
36 Ga0070663_100061465 3300005455 Bacteria 2705
37 Ga0070678_100002280 3300005456 Bacteria 10442
38 Ga0070662_100012403 3300005457 Bacteria 5651
39 Ga0070662_100013127 3300005457 Bacteria 5506
40 Ga0070662_100020637 3300005457 Bacteria 4491
41 Ga0070662_100041473 3300005457 Bacteria 3283
42 Ga0070662_100042795 3300005457 Bacteria 3237
43 Ga0070681_10069627 3300005458 Bacteria 3485
44 Ga0068867_100000233 3300005459 Bacteria 36402
45 Ga0068867_100002739 3300005459 Bacteria 12422
46 Ga0070706_100013591 3300005467 Bacteria 7527
47 Ga0070706_100040775 3300005467 Bacteria 4286
48 Ga0070699_100159697 3300005518 Bacteria 1995
49 Ga0070679_100008857 3300005530 Bacteria 9498
50 Ga0070684_100104782 3300005535 Bacteria 2530
51 Ga0070672_100000121 3300005543 Bacteria 40117
52 Ga0070672_100026024 3300005543 Bacteria 4348
53 Ga0068855_100049162 3300005563 Bacteria 4975
54 Ga0070664_100000246 3300005564 Bacteria 39053
55 Ga0070664_100016563 3300005564 Bacteria 6045
56 Ga0070664_100062319 3300005564 Bacteria 3179
57 Ga0068857_100016123 3300005577 Bacteria 6545
58 Ga0068857_100037177 3300005577 Bacteria 4313
59 Ga0068854_100039057 3300005578 Bacteria 3341
60 Ga0068856_100019011 3300005614 Bacteria 6666
61 Ga0068856_100023685 3300005614 Bacteria 5970
62 Ga0068856_100079649 3300005614 Bacteria 3248
63 Ga0068852_100139506 3300005616 Bacteria 2242
64 Ga0068859_100005691 3300005617 Bacteria 12684
65 Ga0068859_100040401 3300005617 Bacteria 4683
66 Ga0068859_100102449 3300005617 Bacteria 2920
67 Ga0068864_100015243 3300005618 Bacteria 6393
68 Ga0068864_100022474 3300005618 Bacteria 5289
69 Ga0068861_100002482 3300005719 Bacteria 12022
70 Ga0068861_100021510 3300005719 Bacteria 4636
71 Ga0068861_100099878 3300005719 Bacteria 2306
72 Ga0068863_100010276 3300005841 Bacteria 9094
73 Ga0068858_100003339 3300005842 Bacteria 15987
74 Ga0068858_100045866 3300005842 Bacteria 4052
75 Ga0068858_100064057 3300005842 Bacteria 3402
76 Ga0068860_100004858 3300005843 Bacteria 13703
77 Ga0068860_100129020 3300005843 Bacteria 2425
78 Ga0068862_100004734 3300005844 Bacteria 11458
79 Ga0068862_100010590 3300005844 Bacteria 7623
80 Ga0068862_100047333 3300005844 Bacteria 3670
81 Ga0068862_100138725 3300005844 Bacteria 2157
82 Ga0075362_10029083 3300006177 Bacteria 2378
83 Ga0075367_10011156 3300006178 Bacteria 4742
84 Ga0075369_10001782 3300006186 Bacteria 7488
85 Ga0075366_10012138 3300006195 Bacteria 4881
86 Ga0075366_10017824 3300006195 Bacteria 4095
87 Ga0075370_10006268 3300006353 Bacteria 5972
88 Ga0075370_10069064 3300006353 Bacteria 2019
89 Ga0075370_10071786 3300006353 Bacteria 1981
90 Ga0068871_100031625 3300006358 Bacteria 4175
91 Ga0068871_100044105 3300006358 Bacteria 3584
92 Ga0068865_100001989 3300006881 Bacteria 12065
93 Ga0097620_100005691 3300006931 Bacteria 12684
94 Ga0097620_100040401 3300006931 Bacteria 4683
95 Ga0097620_100102442 3300006931 Bacteria 2920
96 Ga0099823_1001509 3300006944 Bacteria 19439
97 Ga0079104_1000408 3300006946 Bacteria 49476
98 Ga0105240_10016550 3300009093 Bacteria 9981
99 Ga0105245_10152661 3300009098 Bacteria 2185
100 Ga0114129_10085497 3300009147 Bacteria 4376
101 Ga0105243_10079409 3300009148 Bacteria 2674
102 Ga0105243_10087161 3300009148 Bacteria 2562
103 Ga0105248_10003500 3300009177 Bacteria 17423
104 Ga0105248_10030711 3300009177 Bacteria 6001
105 Ga0105248_10094303 3300009177 Bacteria 3370
106 Ga0105237_10009312 3300009545 Bacteria 10521
107 Ga0105237_10039126 3300009545 Bacteria 4787
108 Ga0105238_10077240 3300009551 Bacteria 3321
109 Ga0105249_10017385 3300009553 Bacteria 6385
110 Ga0105239_10125237 3300010375 Bacteria 2855
111 Ga0105239_10207763 3300010375 Bacteria 2194
112 Ga0157319_1000012 3300012497 Bacteria 165761
113 Ga0157369_10093862 3300013105 Bacteria 3203
114 Ga0157369_10151090 3300013105 Bacteria 2454
115 Ga0157374_10021171 3300013296 Bacteria 5781
116 Ga0157378_10002855 3300013297 Bacteria 15412
117 Ga0163162_10025158 3300013306 Bacteria 5884
118 Ga0157372_10017270 3300013307 Bacteria 7747
119 Ga0157372_10058118 3300013307 Bacteria 4323
120 Ga0157377_10019205 3300014745 Bacteria 3568
121 Ga0157379_10004903 3300014968 Bacteria 11489
122 Ga0157379_10069758 3300014968 Bacteria 3144
123 Ga0157379_10107218 3300014968 Bacteria 2508
124 Ga0157376_10003290 3300014969 Bacteria 11129
125 Ga0213872_10000012 3300021361 Bacteria 191291
126 Ga0213872_10000251 3300021361 Bacteria 46656
127 Ga0209563_100013 3300025230 Bacteria 941463
128 Ga0209673_1003207 3300025273 Bacteria 9909
129 Ga0209673_1016554 3300025273 Bacteria 2750
130 Ga0209564_1000003 3300025295 Bacteria 1585848
131 Ga0209050_1001065 3300025298 Bacteria 33725
132 Ga0209050_1021643 3300025298 Bacteria 2336
133 Ga0209256_1000019 3300025299 Bacteria 558627
134 Ga0209256_1000306 3300025299 Bacteria 85936
135 Ga0209051_1000133 3300025303 Bacteria 139014
136 Ga0209051_1006168 3300025303 Bacteria 6808
137 Ga0209051_1012541 3300025303 Bacteria 4094
138 Ga0209257_1000038 3300025304 Bacteria 609032
139 Ga0209257_1000094 3300025304 Bacteria 262243
140 Ga0209257_1001179 3300025304 Bacteria 33049
141 Ga0209257_1007511 3300025304 Bacteria 6556
142 Ga0207682_10009317 3300025893 Bacteria 3880
143 Ga0207682_10023433 3300025893 Bacteria 2439
144 Ga0207645_10050998 3300025907 Bacteria 2644
145 Ga0207684_10041922 3300025910 Bacteria 3880
146 Ga0207684_10075489 3300025910 Bacteria 2864
147 Ga0207707_10062079 3300025912 Bacteria 3251
148 Ga0207695_10032789 3300025913 Bacteria 5678
149 Ga0207671_10033708 3300025914 Bacteria 3808
150 Ga0207657_10033824 3300025919 Bacteria 4603
151 Ga0207649_10010632 3300025920 Bacteria 5060
152 Ga0207649_10038513 3300025920 Bacteria 2895
153 Ga0207652_10060396 3300025921 Bacteria 3270
154 Ga0207681_10099457 3300025923 Bacteria 2094
155 Ga0207694_10038010 3300025924 Bacteria 3700
156 Ga0207650_10002435 3300025925 Bacteria 12959
157 Ga0207659_10046358 3300025926 Bacteria 3069
158 Ga0207687_10025412 3300025927 Bacteria 3962
159 Ga0207644_10016347 3300025931 Bacteria 4992
160 Ga0207644_10024784 3300025931 Bacteria 4121
161 Ga0207690_10030909 3300025932 Bacteria 3421
162 Ga0207706_10001250 3300025933 Bacteria 25577
163 Ga0207706_10004906 3300025933 Bacteria 12514
164 Ga0207706_10016730 3300025933 Bacteria 6620
165 Ga0207706_10028580 3300025933 Bacteria 4980
166 Ga0207709_10057150 3300025935 Bacteria 2418
167 Ga0207691_10005251 3300025940 Bacteria 12506
168 Ga0207691_10050848 3300025940 Bacteria 3792
169 Ga0207691_10059649 3300025940 Bacteria 3469
170 Ga0207711_10034436 3300025941 Bacteria 4289
171 Ga0207689_10003690 3300025942 Bacteria 13958
172 Ga0207661_10037479 3300025944 Bacteria 3792
173 Ga0207679_10000077 3300025945 Bacteria 86432
174 Ga0207679_10052648 3300025945 Bacteria 2986
175 Ga0207667_10051255 3300025949 Bacteria 4352
176 Ga0207667_10057920 3300025949 Bacteria 4065
177 Ga0207651_10003234 3300025960 Bacteria 7973
178 Ga0207651_10067152 3300025960 Bacteria 2522
179 Ga0207712_10149705 3300025961 Bacteria 1801
180 Ga0207668_10012958 3300025972 Bacteria 5123
181 Ga0207668_10021242 3300025972 Bacteria 4138
182 Ga0207640_10034321 3300025981 Bacteria 3165
183 Ga0207677_10000913 3300026023 Bacteria 16539
184 Ga0207677_10002997 3300026023 Bacteria 8919
185 Ga0207703_10032253 3300026035 Bacteria 4145
186 Ga0207678_10000060 3300026067 Bacteria 85708
187 Ga0207678_10007367 3300026067 Bacteria 9739
188 Ga0207702_10077258 3300026078 Bacteria 2879
189 Ga0207702_10083061 3300026078 Bacteria 2786
190 Ga0207641_10018059 3300026088 Bacteria 5780
191 Ga0207648_10002705 3300026089 Bacteria 18860
192 Ga0207648_10005261 3300026089 Bacteria 13061
193 Ga0207648_10021301 3300026089 Bacteria 5827
194 Ga0207648_10038467 3300026089 Bacteria 4209
195 Ga0207676_10005004 3300026095 Bacteria 9386
196 Ga0207674_10007706 3300026116 Bacteria 12530
197 Ga0207674_10047011 3300026116 Bacteria 4427
198 Ga0207675_100006098 3300026118 Bacteria 11469
199 Ga0207675_100018208 3300026118 Bacteria 6549
200 Ga0207675_100031954 3300026118 Bacteria 4904
201 Ga0207675_100157393 3300026118 Bacteria 2165
202 Ga0207683_10019656 3300026121 Bacteria 5772
203 Ga0207698_10014931 3300026142 Bacteria 5184
204 Ga0207698_10083288 3300026142 Bacteria 2588
205 Ga0209281_1000023 3300027111 Bacteria 519955
206 Ga0209389_1008370 3300027296 Bacteria 9194
207 Ga0268265_10012482 3300028380 Bacteria 5756
208 Ga0268264_10002802 3300028381 Bacteria 15240
209 Ga0268264_10008361 3300028381 Bacteria 8602
210 Ga0268264_10030401 3300028381 Bacteria 4426
211 Ga0307517_10002447 3300028786 Bacteria 29685
212 Ga0307515_10000058 3300028794 Bacteria 259680
213 Ga0307515_10018912 3300028794 Bacteria 12438
214 Ga0307515_10032371 3300028794 Bacteria 8666
215 Ga0307515_10048718 3300028794 Bacteria 6399
216 Ga0307515_10110271 3300028794 Bacteria 3223
217 Ga0268256_1015294 3300030500 Bacteria 2246
218 Ga0265327_10000120 3300031251 Bacteria 171108
219 Ga0307513_10010871 3300031456 Bacteria 11368
220 Ga0307509_10046126 3300031507 Bacteria 4693
221 Ga0307408_100000008 3300031548 Bacteria 456355
222 Ga0307508_10000099 3300031616 Bacteria 102389
223 Ga0307508_10056175 3300031616 Bacteria 3486
224 Ga0307516_10195939 3300031730 Bacteria 1743
225 Ga0307405_10030638 3300031731 Bacteria 3157
226 Ga0307411_10048810 3300032005 Bacteria 2746
227 Ga0307415_100000567 3300032126 Bacteria 16191
228 Ga0373940_0028850 3300035088 Bacteria 1467
229 Ga0373939_0000080 3300035114 Bacteria 30555
230 Ga0373931_0000982 3300035691 Bacteria 12048
231 Ga0373931_0003373 3300035691 Bacteria 7165
232 Ga0373925_0001272 3300037068 Bacteria 22250
233 Ga0373925_0041321 3300037068 Bacteria 3418
234 Ga0395900_0010853 3300037418 Bacteria 9317
235 Ga0395898_0000466 3300037466 Bacteria 80988
236 Ga0395905_0001450 3300037471 Bacteria 28489
237 Ga0395905_0016738 3300037471 Bacteria 6967
238 Ga0436365_0177476 3300039437 Bacteria 8656
239 Ga0436361_0351372 3300039447 Bacteria 183069
240 Ga0436361_0490539 3300039447 Bacteria 60948
241 Ga0450917_000084 3300042120 Bacteria 5477
242 Ga0450891_000686 3300042129 Bacteria 3534
243 Ga0439459_0000929 3300042438 Bacteria 4127
244 Ga0466972_0005684 3300044658 Bacteria 6253
245 Ga0453684_0006064 3300044712 Bacteria 23358
246 Ga0453684_0015852 3300044712 Bacteria 11847
247 Ga0466960_0050371 3300044901 Bacteria 2008
248 Ga0466959_0095220 3300045049 Bacteria 2135
249 Ga0451576_0150864 3300045051 Bacteria 2424
250 Ga0495580_0028177 3300046472 Bacteria 4085
251 Ga0495630_0100757 3300046517 Bacteria 2185
252 Ga0495632_0014939 3300046519 Bacteria 4373
253 Ga0495597_0006252 3300046542 Bacteria 6174
254 Ga0495625_0033922 3300046660 Bacteria 3769
255 Ga0495670_0014601 3300046691 Bacteria 3862
256 Ga0495649_0013920 3300046694 Bacteria 4627
257 Ga0495676_0023410 3300047321 Bacteria 5362
258 Ga0495687_000863 3300047443 Bacteria 32127
259 Ga0495687_025762 3300047443 Bacteria 2773
260 Ga0495686_0001721 3300047472 Bacteria 22528
261 Ga0495593_0078773 3300047673 Bacteria 1706
262 Ga0496101_0069330 3300048904 Bacteria 2580
263 Ga0496104_0026526 3300048907 Bacteria 5352
264 Ga0496104_0106273 3300048907 Bacteria 2690
265 Ga0496105_0027089 3300048908 Bacteria 4679
266 Ga0496106_0033869 3300048909 Bacteria 3813
267 Ga0496108_0051914 3300048911 Bacteria 3435
268 Ga0496108_0105287 3300048911 Bacteria 2408
269 Ga0496110_0018660 3300048913 Bacteria 5820
270 Ga0496111_0027650 3300048914 Bacteria 4015
271 Ga0496112_0032010 3300048915 Bacteria 5105
272 Ga0496113_0030117 3300048916 Bacteria 3926
273 Ga0496113_0158506 3300048916 Bacteria 1788
274 Ga0496114_0007005 3300048917 Bacteria 8889
275 Ga0496114_0074429 3300048917 Bacteria 2859
276 Ga0496115_0035913 3300048918 Bacteria 3923
277 Ga0496121_0008694 3300048924 Bacteria 11856
278 Ga0496125_0111893 3300048928 Bacteria 1975
279 Ga0501300_002723 3300049523 Bacteria 2641
280 Ga0501235_000392 3300049669 Bacteria 8386
281 Ga0501225_0020118 3300049705 Bacteria 1845
282 Ga0501229_000812 3300049706 Bacteria 3531
283 Ga0501262_003038 3300049759 Bacteria 1914
284 nmdc:mga03683_9795_c1 3300050489 Bacteria 3419
285 nmdc:mga0k408_22830_c1 3300050493 Bacteria 3526
286 nmdc:mga0k408_24168_c1 3300050493 Bacteria 3433
287 nmdc:mga0k408_5627_c1 3300050493 Bacteria 6659
288 nmdc:mga06z11_3675_c1 3300050494 Bacteria 5958
289 nmdc:mga07m45_1377_c1 3300050496 Bacteria 5351
290 nmdc:mga07m45_1673_c1 3300050496 Bacteria 10195
291 nmdc:mga07m45_2011_c1 3300050496 Bacteria 9423
292 nmdc:mga07m45_6649_c1 3300050496 Bacteria 5863
293 nmdc:mga0sz30_29663_c1 3300050516 Bacteria 2257
294 Ga0495619_0033539 3300053085 Bacteria 3335
295 Ga0500559_0000027 3300053136 Bacteria 118758
296 Ga0500622_0000724 3300053156 Bacteria 28829
297 Ga0500622_0009546 3300053156 Bacteria 5363
298 Ga0500645_005125 3300053730 Bacteria 4888
299 Ga0500587_002302 3300053739 Bacteria 2721

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035088 Ga0373940_0028850 Ga0373940_0028850_11_1159 373
2 3300046517 Ga0495630_0100757 Ga0495630_0100757_11_1273 417
3 3300028794 Ga0307515_10032371 Ga0307515_100323714 442
4 3300028794 Ga0307515_10018912 Ga0307515_100189125 444
5 3300050493 nmdc:mga0k408_5627_c1 nmdc:mga0k408_5627_c1_2861_4381 455
6 3300005344 Ga0070661_100002707 Ga0070661_10000270711 458
7 3300005564 Ga0070664_100000246 Ga0070664_10000024636 458
8 3300025920 Ga0207649_10010632 Ga0207649_100106322 458
9 3300025945 Ga0207679_10000077 Ga0207679_1000007774 458
10 3300005844 Ga0068862_100004734 Ga0068862_1000047349 465
11 3300013297 Ga0157378_10002855 Ga0157378_100028554 466
12 3300028786 Ga0307517_10002447 Ga0307517_1000244722 467
13 3300047321 Ga0495676_0023410 Ga0495676_0023410_3109_4659 469
14 3300006946 Ga0079104_1000408 Ga0079104_100040817 472
15 3300027111 Ga0209281_1000023 Ga0209281_100002317 472
16 3300005617 Ga0068859_100102449 Ga0068859_1001024493 475
17 3300006931 Ga0097620_100102442 Ga0097620_1001024422 475
18 3300006195 Ga0075366_10012138 Ga0075366_100121384 477
19 3300047472 Ga0495686_0001721 Ga0495686_0001721_20149_21708 478
20 3300005563 Ga0068855_100049162 Ga0068855_1000491622 480
21 3300025949 Ga0207667_10051255 Ga0207667_100512552 480
22 3300003775 Ga0055524_1000033 Ga0055524_1000033159 484
23 3300003791 Ga0055530_10003137 Ga0055530_100031374 484
24 3300003792 Ga0055540_1000371 Ga0055540_10003718 484
25 3300003794 Ga0055531_10013432 Ga0055531_100134323 484
26 3300025298 Ga0209050_1001065 Ga0209050_10010659 484
27 3300025299 Ga0209256_1000019 Ga0209256_1000019435 484
28 3300025303 Ga0209051_1000133 Ga0209051_1000133102 484
29 3300025304 Ga0209257_1000038 Ga0209257_1000038102 484
30 3300031507 Ga0307509_10046126 Ga0307509_100461261 484
31 3300048917 Ga0496114_0007005 Ga0496114_0007005_4775_6328 484
32 3300025893 Ga0207682_10023433 Ga0207682_100234332 485
33 3300005457 Ga0070662_100020637 Ga0070662_1000206374 486
34 3300005543 Ga0070672_100000121 Ga0070672_10000012133 486
35 3300005618 Ga0068864_100022474 Ga0068864_1000224742 486
36 3300005842 Ga0068858_100045866 Ga0068858_1000458663 486
37 3300025940 Ga0207691_10005251 Ga0207691_100052519 486
38 3300025940 Ga0207691_10050848 Ga0207691_100508482 486
39 3300026121 Ga0207683_10019656 Ga0207683_100196563 486
40 3300028381 Ga0268264_10030401 Ga0268264_100304013 486
41 3300037068 Ga0373925_0001272 Ga0373925_0001272_19126_20700 486
42 3300005329 Ga0070683_100179666 Ga0070683_1001796661 487
43 3300005347 Ga0070668_100022359 Ga0070668_1000223592 487
44 3300005354 Ga0070675_100092871 Ga0070675_1000928712 487
45 3300009148 Ga0105243_10087161 Ga0105243_100871612 487
46 3300013105 Ga0157369_10151090 Ga0157369_101510901 487
47 3300025907 Ga0207645_10050998 Ga0207645_100509982 487
48 3300025923 Ga0207681_10099457 Ga0207681_100994572 487
49 3300025926 Ga0207659_10046358 Ga0207659_100463582 487
50 3300026089 Ga0207648_10021301 Ga0207648_100213012 487
51 3300005530 Ga0070679_100008857 Ga0070679_1000088575 488
52 3300021361 Ga0213872_10000012 Ga0213872_1000001223 489
53 3300025921 Ga0207652_10060396 Ga0207652_100603962 489
54 3300026118 Ga0207675_100018208 Ga0207675_1000182082 489
55 3300039447 Ga0436361_0351372 Ga0436361_0351372_43640_45208 489
56 3300005328 Ga0070676_10006013 Ga0070676_100060135 490
57 3300005467 Ga0070706_100013591 Ga0070706_1000135913 491
58 3300005518 Ga0070699_100159697 Ga0070699_1001596971 491
59 3300025910 Ga0207684_10075489 Ga0207684_100754893 491
60 3300005331 Ga0070670_100033752 Ga0070670_1000337523 492
61 3300005355 Ga0070671_100009522 Ga0070671_1000095222 492
62 3300025925 Ga0207650_10002435 Ga0207650_100024353 492
63 3300031616 Ga0307508_10000099 Ga0307508_1000009943 494
64 3300006178 Ga0075367_10011156 Ga0075367_100111563 495
65 3300009177 Ga0105248_10003500 Ga0105248_100035005 495
66 3300048915 Ga0496112_0032010 Ga0496112_0032010_179_1798 496
67 3300048916 Ga0496113_0158506 Ga0496113_0158506_134_1753 496
68 3300050493 nmdc:mga0k408_24168_c1 nmdc:mga0k408_24168_c1_1541_3115 496
69 3300031731 Ga0307405_10030638 Ga0307405_100306382 497
70 3300032005 Ga0307411_10048810 Ga0307411_100488102 497
71 3300032126 Ga0307415_100000567 Ga0307415_10000056714 497
72 3300045051 Ga0451576_0150864 Ga0451576_0150864_193_1752 498
73 3300005457 Ga0070662_100041473 Ga0070662_1000414732 499
74 3300025933 Ga0207706_10028580 Ga0207706_100285804 499
75 3300026118 Ga0207675_100157393 Ga0207675_1001573933 499
76 3300028794 Ga0307515_10110271 Ga0307515_101102713 499
77 3300005457 Ga0070662_100042795 Ga0070662_1000427952 500
78 3300005577 Ga0068857_100016123 Ga0068857_1000161234 500
79 3300005719 Ga0068861_100099878 Ga0068861_1000998782 500
80 3300006177 Ga0075362_10029083 Ga0075362_100290833 500
81 3300006186 Ga0075369_10001782 Ga0075369_100017824 500
82 3300006195 Ga0075366_10017824 Ga0075366_100178243 500
83 3300009093 Ga0105240_10016550 Ga0105240_100165507 500
84 3300009148 Ga0105243_10079409 Ga0105243_100794092 500
85 3300009545 Ga0105237_10009312 Ga0105237_100093125 500
86 3300010375 Ga0105239_10207763 Ga0105239_102077632 500
87 3300025913 Ga0207695_10032789 Ga0207695_100327892 500
88 3300025914 Ga0207671_10033708 Ga0207671_100337083 500
89 3300025933 Ga0207706_10016730 Ga0207706_100167303 500
90 3300025935 Ga0207709_10057150 Ga0207709_100571502 500
91 3300026116 Ga0207674_10007706 Ga0207674_100077063 500
92 3300031616 Ga0307508_10056175 Ga0307508_100561752 500
93 3300050494 nmdc:mga06z11_3675_c1 nmdc:mga06z11_3675_c1_4189_5739 500
94 3300050496 nmdc:mga07m45_6649_c1 nmdc:mga07m45_6649_c1_4121_5683 500
95 3300050516 nmdc:mga0sz30_29663_c1 nmdc:mga0sz30_29663_c1_117_1667 500
96 iso_pu_bacteria 2643221654 2644303654 500
97 3300053730 Ga0500645_005125 Ga0500645_005125_1520_3064 502
98 3300005366 Ga0070659_100007229 Ga0070659_1000072295 503
99 3300005459 Ga0068867_100000233 Ga0068867_1000002334 503
100 3300005843 Ga0068860_100004858 Ga0068860_1000048587 503
101 3300005844 Ga0068862_100047333 Ga0068862_1000473333 503
102 3300006881 Ga0068865_100001989 Ga0068865_1000019895 503
103 3300025961 Ga0207712_10149705 Ga0207712_101497052 503
104 3300026089 Ga0207648_10002705 Ga0207648_1000270511 503
105 3300037068 Ga0373925_0041321 Ga0373925_0041321_518_2062 503
106 3300046519 Ga0495632_0014939 Ga0495632_0014939_2708_4282 503
107 3300046694 Ga0495649_0013920 Ga0495649_0013920_115_1689 503
108 3300047443 Ga0495687_025762 Ga0495687_025762_212_1786 503
109 3300050493 nmdc:mga0k408_22830_c1 nmdc:mga0k408_22830_c1_1062_2579 503
110 3300053085 Ga0495619_0033539 Ga0495619_0033539_650_2230 503
111 3300003775 Ga0055524_1000781 Ga0055524_100078112 504
112 3300025299 Ga0209256_1000306 Ga0209256_100030627 504
113 3300044712 Ga0453684_0006064 Ga0453684_0006064_13392_14975 504
114 3300050496 nmdc:mga07m45_1377_c1 nmdc:mga07m45_1377_c1_1853_3415 504
115 3300005564 Ga0070664_100016563 Ga0070664_1000165635 505
116 3300006353 Ga0075370_10069064 Ga0075370_100690642 505
117 3300012497 Ga0157319_1000012 Ga0157319_100001250 505
118 3300025304 Ga0209257_1001179 Ga0209257_100117921 505
119 3300005327 Ga0070658_10045103 Ga0070658_100451033 506
120 3300005329 Ga0070683_100011636 Ga0070683_1000116367 506
121 3300005344 Ga0070661_100037257 Ga0070661_1000372573 506
122 3300005467 Ga0070706_100040775 Ga0070706_1000407754 506
123 3300005535 Ga0070684_100104782 Ga0070684_1001047823 506
124 3300005543 Ga0070672_100026024 Ga0070672_1000260244 506
125 3300005564 Ga0070664_100062319 Ga0070664_1000623192 506
126 3300005614 Ga0068856_100023685 Ga0068856_1000236854 506
127 3300005617 Ga0068859_100040401 Ga0068859_1000404013 506
128 3300005719 Ga0068861_100021510 Ga0068861_1000215104 506
129 3300005844 Ga0068862_100010590 Ga0068862_1000105904 506
130 3300006931 Ga0097620_100040401 Ga0097620_1000404013 506
131 3300009551 Ga0105238_10077240 Ga0105238_100772402 506
132 3300009553 Ga0105249_10017385 Ga0105249_100173856 506
133 3300013105 Ga0157369_10093862 Ga0157369_100938623 506
134 3300013306 Ga0163162_10025158 Ga0163162_100251584 506
135 3300013307 Ga0157372_10017270 Ga0157372_100172707 506
136 3300014968 Ga0157379_10069758 Ga0157379_100697583 506
137 3300025910 Ga0207684_10041922 Ga0207684_100419224 506
138 3300025920 Ga0207649_10038513 Ga0207649_100385133 506
139 3300025924 Ga0207694_10038010 Ga0207694_100380103 506
140 3300025940 Ga0207691_10059649 Ga0207691_100596493 506
141 3300025944 Ga0207661_10037479 Ga0207661_100374793 506
142 3300025945 Ga0207679_10052648 Ga0207679_100526483 506
143 3300025972 Ga0207668_10012958 Ga0207668_100129583 506
144 3300026078 Ga0207702_10083061 Ga0207702_100830613 506
145 3300026089 Ga0207648_10038467 Ga0207648_100384672 506
146 3300026118 Ga0207675_100006098 Ga0207675_1000060981 506
147 3300026142 Ga0207698_10083288 Ga0207698_100832883 506
148 3300028380 Ga0268265_10012482 Ga0268265_100124823 506
149 3300028381 Ga0268264_10002802 Ga0268264_100028024 506
150 3300047673 Ga0495593_0078773 Ga0495593_0078773_125_1675 506
151 3300048924 Ga0496121_0008694 Ga0496121_0008694_2219_3775 506
152 3300005458 Ga0070681_10069627 Ga0070681_100696272 507
153 3300025912 Ga0207707_10062079 Ga0207707_100620793 507
154 3300053136 Ga0500559_0000027 Ga0500559_0000027_87276_88826 507
155 3300053156 Ga0500622_0009546 Ga0500622_0009546_1940_3490 507
156 3300053739 Ga0500587_002302 Ga0500587_002302_1012_2562 507
157 3300031730 Ga0307516_10195939 Ga0307516_101959391 508
158 3300046542 Ga0495597_0006252 Ga0495597_0006252_2060_3622 508
159 3300047443 Ga0495687_000863 Ga0495687_000863_17366_18928 508
160 3300006353 Ga0075370_10006268 Ga0075370_100062684 509
161 3300050496 nmdc:mga07m45_2011_c1 nmdc:mga07m45_2011_c1_6515_8068 509
162 3300003322 rootL2_10001264 rootL2_100012643 510
163 3300005616 Ga0068852_100139506 Ga0068852_1001395062 511
164 3300028794 Ga0307515_10048718 Ga0307515_100487186 511
165 3300050489 nmdc:mga03683_9795_c1 nmdc:mga03683_9795_c1_1839_3401 511
166 3300005367 Ga0070667_100025997 Ga0070667_1000259972 512
167 iso_pu_bacteria 2738541337 2739056908 512
168 3300005328 Ga0070676_10041948 Ga0070676_100419481 513
169 3300006353 Ga0075370_10071786 Ga0075370_100717862 513
170 3300014968 Ga0157379_10107218 Ga0157379_101072182 513
171 3300046660 Ga0495625_0033922 Ga0495625_0033922_2075_3637 513
172 3300048928 Ga0496125_0111893 Ga0496125_0111893_383_1933 513
173 iso_pu_bacteria 2643221646 2644257374 513
174 3300021361 Ga0213872_10000251 Ga0213872_100002511 514
175 3300039447 Ga0436361_0490539 Ga0436361_0490539_58835_60433 514
176 3300005354 Ga0070675_100023617 Ga0070675_1000236171 515
177 3300005364 Ga0070673_100002463 Ga0070673_1000024636 515
178 3300005459 Ga0068867_100002739 Ga0068867_1000027395 515
179 3300005577 Ga0068857_100037177 Ga0068857_1000371773 515
180 3300009098 Ga0105245_10152661 Ga0105245_101526612 515
181 3300025893 Ga0207682_10009317 Ga0207682_100093173 515
182 3300025931 Ga0207644_10024784 Ga0207644_100247844 515
183 3300025960 Ga0207651_10003234 Ga0207651_100032347 515
184 3300026089 Ga0207648_10005261 Ga0207648_100052612 515
185 3300026116 Ga0207674_10047011 Ga0207674_100470114 515
186 iso_pu_bacteria 2643221544 2643742556 515
187 3300005338 Ga0068868_100000575 Ga0068868_10000057513 516
188 3300005354 Ga0070675_100055290 Ga0070675_1000552902 516
189 3300005355 Ga0070671_100018121 Ga0070671_1000181213 516
190 3300005367 Ga0070667_100005605 Ga0070667_1000056054 516
191 3300005456 Ga0070678_100002280 Ga0070678_10000228011 516
192 3300005617 Ga0068859_100005691 Ga0068859_1000056914 516
193 3300005618 Ga0068864_100015243 Ga0068864_1000152434 516
194 3300005841 Ga0068863_100010276 Ga0068863_1000102764 516
195 3300005842 Ga0068858_100003339 Ga0068858_1000033397 516
196 3300006358 Ga0068871_100044105 Ga0068871_1000441052 516
197 3300006931 Ga0097620_100005691 Ga0097620_10000569111 516
198 3300009177 Ga0105248_10030711 Ga0105248_100307113 516
199 3300025931 Ga0207644_10016347 Ga0207644_100163473 516
200 3300025960 Ga0207651_10067152 Ga0207651_100671522 516
201 3300026023 Ga0207677_10002997 Ga0207677_100029974 516
202 3300026035 Ga0207703_10032253 Ga0207703_100322532 516
203 3300026088 Ga0207641_10018059 Ga0207641_100180594 516
204 3300037471 Ga0395905_0001450 Ga0395905_0001450_18471_20024 516
205 3300046472 Ga0495580_0028177 Ga0495580_0028177_1603_3165 516
206 3300048907 Ga0496104_0026526 Ga0496104_0026526_3282_4844 516
207 3300048908 Ga0496105_0027089 Ga0496105_0027089_1281_2843 516
208 3300048911 Ga0496108_0105287 Ga0496108_0105287_517_2079 516
209 iso_pu_bacteria 2585428057 2587729381 516
210 iso_pu_bacteria 2585428058 2587732773 516
211 3300009147 Ga0114129_10085497 Ga0114129_100854973 517
212 3300037471 Ga0395905_0016738 Ga0395905_0016738_2276_3844 517
213 iso_pu_bacteria 2643221585 2643936074 517
214 iso_pu_bacteria 2643221656 2644316719 517
215 3300003794 Ga0055531_10000044 Ga0055531_1000004474 519
216 3300005614 Ga0068856_100019011 Ga0068856_1000190113 519
217 3300025303 Ga0209051_1012541 Ga0209051_10125412 519
218 3300025304 Ga0209257_1000094 Ga0209257_1000094169 519
219 3300031548 Ga0307408_100000008 Ga0307408_100000008352 519
220 3300035114 Ga0373939_0000080 Ga0373939_0000080_14625_16190 519
221 3300035691 Ga0373931_0003373 Ga0373931_0003373_5106_6671 519
222 3300042120 Ga0450917_000084 Ga0450917_000084_606_2168 519
223 3300042129 Ga0450891_000686 Ga0450891_000686_1046_2608 519
224 3300049523 Ga0501300_002723 Ga0501300_002723_181_1746 519
225 3300049669 Ga0501235_000392 Ga0501235_000392_4206_5771 519
226 3300049705 Ga0501225_0020118 Ga0501225_0020118_231_1796 519
227 3300049706 Ga0501229_000812 Ga0501229_000812_1698_3263 519
228 3300049759 Ga0501262_003038 Ga0501262_003038_132_1697 519
229 3300050496 nmdc:mga07m45_1673_c1 nmdc:mga07m45_1673_c1_5140_6705 519
230 3300005328 Ga0070676_10015317 Ga0070676_100153173 520
231 3300005334 Ga0068869_100001012 Ga0068869_10000101214 520
232 3300005339 Ga0070660_100112050 Ga0070660_1001120502 520
233 3300005366 Ga0070659_100025703 Ga0070659_1000257032 520
234 3300005455 Ga0070663_100061465 Ga0070663_1000614653 520
235 3300005457 Ga0070662_100013127 Ga0070662_1000131275 520
236 3300005578 Ga0068854_100039057 Ga0068854_1000390573 520
237 3300005614 Ga0068856_100079649 Ga0068856_1000796492 520
238 3300005719 Ga0068861_100002482 Ga0068861_1000024822 520
239 3300005842 Ga0068858_100064057 Ga0068858_1000640572 520
240 3300005843 Ga0068860_100129020 Ga0068860_1001290203 520
241 3300006358 Ga0068871_100031625 Ga0068871_1000316253 520
242 3300025919 Ga0207657_10033824 Ga0207657_100338242 520
243 3300025927 Ga0207687_10025412 Ga0207687_100254123 520
244 3300025932 Ga0207690_10030909 Ga0207690_100309093 520
245 3300025933 Ga0207706_10004906 Ga0207706_1000490610 520
246 3300025941 Ga0207711_10034436 Ga0207711_100344362 520
247 3300025942 Ga0207689_10003690 Ga0207689_1000369012 520
248 3300025949 Ga0207667_10057920 Ga0207667_100579203 520
249 3300025972 Ga0207668_10021242 Ga0207668_100212423 520
250 3300025981 Ga0207640_10034321 Ga0207640_100343212 520
251 3300026023 Ga0207677_10000913 Ga0207677_1000091313 520
252 3300026067 Ga0207678_10007367 Ga0207678_100073674 520
253 3300026095 Ga0207676_10005004 Ga0207676_100050048 520
254 3300026118 Ga0207675_100031954 Ga0207675_1000319544 520
255 3300026142 Ga0207698_10014931 Ga0207698_100149313 520
256 3300028381 Ga0268264_10008361 Ga0268264_100083618 520
257 3300028794 Ga0307515_10000058 Ga0307515_10000058197 520
258 3300031251 Ga0265327_10000120 Ga0265327_1000012071 520
259 3300003759 Ga0055525_1000004 Ga0055525_1000004770 521
260 3300025230 Ga0209563_100013 Ga0209563_100013772 521
261 3300026067 Ga0207678_10000060 Ga0207678_1000006061 521
262 3300031456 Ga0307513_10010871 Ga0307513_100108717 521
263 3300045049 Ga0466959_0095220 Ga0466959_0095220_179_1753 521
264 3300005457 Ga0070662_100012403 Ga0070662_1000124035 522
265 3300025273 Ga0209673_1003207 Ga0209673_100320710 522
266 3300025303 Ga0209051_1006168 Ga0209051_10061688 522
267 3300025304 Ga0209257_1007511 Ga0209257_10075112 522
268 3300025933 Ga0207706_10001250 Ga0207706_100012507 522
269 3300044658 Ga0466972_0005684 Ga0466972_0005684_3738_5309 522
270 3300044901 Ga0466960_0050371 Ga0466960_0050371_175_1749 522
271 3300003771 Ga0055526_1002103 Ga0055526_10021031 523
272 3300005262 Ga0065165_1000006 Ga0065165_100000672 523
273 3300009545 Ga0105237_10039126 Ga0105237_100391264 523
274 3300025295 Ga0209564_1000003 Ga0209564_10000031029 523
275 3300046691 Ga0495670_0014601 Ga0495670_0014601_1704_3275 523
276 3300005844 Ga0068862_100138725 Ga0068862_1001387251 524
277 3300009177 Ga0105248_10094303 Ga0105248_100943033 524
278 3300010375 Ga0105239_10125237 Ga0105239_101252373 524
279 3300013296 Ga0157374_10021171 Ga0157374_100211714 524
280 3300013307 Ga0157372_10058118 Ga0157372_100581182 524
281 3300014745 Ga0157377_10019205 Ga0157377_100192051 524
282 3300014968 Ga0157379_10004903 Ga0157379_100049038 524
283 3300014969 Ga0157376_10003290 Ga0157376_100032909 524
284 3300026078 Ga0207702_10077258 Ga0207702_100772582 524
285 3300035691 Ga0373931_0000982 Ga0373931_0000982_9456_11045 524
286 3300037418 Ga0395900_0010853 Ga0395900_0010853_5754_7334 524
287 3300037466 Ga0395898_0000466 Ga0395898_0000466_73108_74688 524
288 3300039437 Ga0436365_0177476 Ga0436365_0177476_5079_6668 524
289 3300048904 Ga0496101_0069330 Ga0496101_0069330_106_1695 524
290 3300048907 Ga0496104_0106273 Ga0496104_0106273_1076_2665 524
291 3300048909 Ga0496106_0033869 Ga0496106_0033869_618_2207 524
292 3300048911 Ga0496108_0051914 Ga0496108_0051914_912_2501 524
293 3300048913 Ga0496110_0018660 Ga0496110_0018660_1902_3491 524
294 3300048914 Ga0496111_0027650 Ga0496111_0027650_705_2294 524
295 3300048916 Ga0496113_0030117 Ga0496113_0030117_1410_2999 524
296 3300048917 Ga0496114_0074429 Ga0496114_0074429_573_2162 524
297 3300048918 Ga0496115_0035913 Ga0496115_0035913_1379_2968 524
298 3300053156 Ga0500622_0000724 Ga0500622_0000724_26417_28024 525
299 3300044712 Ga0453684_0015852 Ga0453684_0015852_5885_7492 526
300 iso_pu_bacteria 2831864461 2831864998 528
301 3300005262 Ga0065165_1000884 Ga0065165_100088419 531
302 3300006944 Ga0099823_1001509 Ga0099823_10015094 534
303 3300025298 Ga0209050_1021643 Ga0209050_10216432 534
304 3300027296 Ga0209389_1008370 Ga0209389_100837011 534
305 3300025273 Ga0209673_1016554 Ga0209673_10165542 535
306 3300003322 rootL2_10000530 rootL2_100005303 537
307 3300030500 Ga0268256_1015294 Ga0268256_10152942 537
308 3300042438 Ga0439459_0000929 Ga0439459_0000929_1929_3545 537

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01564

Spermine_synth

Spermine/spermidine synthase domain

210

400

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3b7p-assembly1.cif.gz_A crystal structure of spermidine synthase from plasmodium falciparum in complex with spermine 0.9305 264 509
4yuv-assembly1.cif.gz_A crystal structure of trypanosoma cruzi spermidine synthase in complex with decarboxylated s-adenosylmethionine 0.918 264 506
4yv0-assembly2.cif.gz_D crystal structure of trypanosoma cruzi spermidine synthase in complex with (2s)-n-methyl-n-phenyl-2,3-dihydro-1,4-benzodioxine- 2-carboxamid 0.917 263 506
6o64-assembly1.cif.gz_A crystal structure of arabidopsis thaliana spermidine synthase isoform 2 (atspds2) 0.9157 264 506
6o63-assembly1.cif.gz_B crystal structure of arabidopsis thaliana spermidine synthase isoform 1 (atspds1) 0.9135 264 506
ID Description Score Start End Superfamily
af_B4E3X6_90_272_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9267 298 482 3.40.50.150
af_B4E3X6_90_272_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9219 298 482 3.40.50.150
af_P9WGE5_283_519_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.916 295 528 3.40.50.150
af_Q4CXJ6_69_296_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9147 298 507 3.40.50.150
af_P19623_75_302_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9085 298 509 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A6B3EYH8-F1-model_v4 Spermidine synthase 0.9797 318 407 GO:0006596
GO:0016740
AF-A0A1X8WSS8-F1-model_v4 deleted 0.9575 378 536
AF-A0A2E8Q5J0-F1-model_v4 deleted 0.9521 31 261
AF-A0A7C0YQJ2-F1-model_v4 PABS domain-containing protein 0.9413 264 480 GO:0006596
GO:0016765
AF-A0A7J3ZA65-F1-model_v4 Polyamine aminopropyltransferase (Putrescine aminopropyltransferase) (PAPT) (Spermidine synthase) (SPDS) (SPDSY) (EC 2.5.1.16) 0.9394 264 506 GO:0004766
GO:0008295

Feature Viewer

pLDDT pTM Quality
83.86 0.62 Medium
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Predicted Structure (AlphaFold2)

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