F399441

General Info

Members Datasets Scaffolds Average Seq Length
307 195 614 220

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2739367664|2739650732
Length 250
Sequence SILFEDGEALVIDKPAGLPLDRPRAGGEALEDHLDTLRFGFVREPAPVHRLDRDTSGCLLLARNPKALKRFSAAFEARQVEKVYLGIVGGEVEGDEGTIELSLSKISSEKDGWRMIPARKGKPAVTHWRVVSRKVGESGAAMTLVEFRPETGRTHQIRVHALAGLGHALVGDPIYGSGEGAARTMLHAAALTVMREGKPPVAAVAPLPFDFTVLGFGEEGEPAETGPAHTGSDETGSEEAASAETGPHDA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
41 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
91 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
93 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
100 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
108 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
109 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
112 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
113 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
117 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
118 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
119 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
120 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
124 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
125 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
126 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
127 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
128 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
129 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
130 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
131 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
132 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
133 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
134 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
135 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
143 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
152 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
159 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
164 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
167 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
168 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
169 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
170 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
171 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
172 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
173 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
174 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
175 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
176 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
177 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
178 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
179 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
180 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
181 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
182 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
183 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
184 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
185 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
186 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
187 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
188 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
189 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
190 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
191 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
192 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
193 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
194 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
195 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.14
Metatranscriptomes 0
Isolates 5.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.89
Nodule 0.65
Rhizoplane 3.58
Rhizosphere 64.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_802780 2162886007 Bacteria 22516
2 JGI24751J29686_10000790 3300002459 Bacteria 7418
3 Ga0065704_10118317 3300005289 Bacteria 1818
4 Ga0065707_10086751 3300005295 Bacteria 5323
5 Ga0070658_10011640 3300005327 Bacteria 7057
6 Ga0070658_10017099 3300005327 Bacteria 5804
7 Ga0070676_10073604 3300005328 Bacteria 2056
8 Ga0070683_100004264 3300005329 Bacteria 11732
9 Ga0070690_100182237 3300005330 Bacteria 1452
10 Ga0070670_100039490 3300005331 Bacteria 4058
11 Ga0070670_100057674 3300005331 Bacteria 3333
12 Ga0070666_10196487 3300005335 Bacteria 1418
13 Ga0070680_100026459 3300005336 Bacteria 4640
14 Ga0070680_100320310 3300005336 Bacteria 1316
15 Ga0070661_100028458 3300005344 Bacteria 4031
16 Ga0070668_100049542 3300005347 Bacteria 3232
17 Ga0070668_100053916 3300005347 Bacteria 3101
18 Ga0070668_100127625 3300005347 Bacteria 2038
19 Ga0070669_100000721 3300005353 Bacteria 24146
20 Ga0070669_100024671 3300005353 Bacteria 4314
21 Ga0070671_100000100 3300005355 Bacteria 54600
22 Ga0070659_100016181 3300005366 Bacteria 5596
23 Ga0070659_100038166 3300005366 Bacteria 3746
24 Ga0070659_100310851 3300005366 Bacteria 1316
25 Ga0070659_100404366 3300005366 Bacteria 1153
26 Ga0070667_100068003 3300005367 Bacteria 3030
27 Ga0070667_100107669 3300005367 Bacteria 2414
28 Ga0070667_100911985 3300005367 Bacteria 818
29 Ga0070708_100959250 3300005445 Bacteria 802
30 Ga0070663_100011070 3300005455 Bacteria 5647
31 Ga0070662_100085254 3300005457 Bacteria 2361
32 Ga0070662_100168394 3300005457 Bacteria 1719
33 Ga0070681_10026436 3300005458 Bacteria 5832
34 Ga0070679_100050905 3300005530 Bacteria 4126
35 Ga0070679_100102084 3300005530 Bacteria 2854
36 Ga0070684_100566116 3300005535 Bacteria 1055
37 Ga0068853_100024865 3300005539 Bacteria 5024
38 Ga0070686_100008361 3300005544 Bacteria 5794
39 Ga0070665_100003844 3300005548 Bacteria 15892
40 Ga0070665_100016231 3300005548 Bacteria 7470
41 Ga0070665_100016418 3300005548 Bacteria 7424
42 Ga0068855_100342414 3300005563 Bacteria 1648
43 Ga0068855_100560336 3300005563 Bacteria 1236
44 Ga0070664_100030403 3300005564 Bacteria 4506
45 Ga0070664_100061533 3300005564 Bacteria 3199
46 Ga0068857_100046630 3300005577 Bacteria 3846
47 Ga0068857_100068417 3300005577 Bacteria 3160
48 Ga0068854_100005934 3300005578 Bacteria 7737
49 Ga0068854_100016828 3300005578 Bacteria 4881
50 Ga0068856_100238303 3300005614 Bacteria 1835
51 Ga0068852_100063123 3300005616 Bacteria 3225
52 Ga0068859_100017336 3300005617 Bacteria 7234
53 Ga0068864_100052055 3300005618 Bacteria 3528
54 Ga0068863_100040710 3300005841 Bacteria 4418
55 Ga0068858_100060021 3300005842 Bacteria 3515
56 Ga0068860_100004487 3300005843 Bacteria 14234
57 Ga0068860_100015280 3300005843 Bacteria 7497
58 Ga0068860_100025171 3300005843 Bacteria 5743
59 Ga0068862_100033766 3300005844 Bacteria 4327
60 Ga0075365_10136663 3300006038 Bacteria 1699
61 Ga0075368_10000270 3300006042 Bacteria 14911
62 Ga0075363_100005672 3300006048 Bacteria 5585
63 Ga0075363_100273305 3300006048 Bacteria 976
64 Ga0075364_10051824 3300006051 Bacteria 2681
65 Ga0075364_10365804 3300006051 Bacteria 983
66 Ga0075362_10000011 3300006177 Bacteria 108953
67 Ga0075362_10003071 3300006177 Bacteria 5749
68 Ga0075362_10020044 3300006177 Bacteria 2791
69 Ga0075367_10036064 3300006178 Bacteria 2865
70 Ga0075369_10012913 3300006186 Bacteria 3305
71 Ga0075369_10014776 3300006186 Bacteria 3124
72 Ga0075369_10076428 3300006186 Bacteria 1480
73 Ga0075366_10000049 3300006195 Bacteria 42384
74 Ga0075366_10013830 3300006195 Bacteria 4599
75 Ga0075366_10051299 3300006195 Bacteria 2451
76 Ga0075366_10127036 3300006195 Bacteria 1538
77 Ga0075366_10366090 3300006195 Bacteria 886
78 Ga0075370_10000004 3300006353 Bacteria 121166
79 Ga0097620_100017336 3300006931 Bacteria 7234
80 Ga0079104_1020110 3300006946 Bacteria 1848
81 Ga0105247_10016243 3300009101 Bacteria 4459
82 Ga0105247_10299081 3300009101 Bacteria 1116
83 Ga0105248_10000415 3300009177 Bacteria 49005
84 Ga0105248_10076920 3300009177 Bacteria 3751
85 Ga0105248_10185092 3300009177 Bacteria 2347
86 Ga0105249_10861747 3300009553 Bacteria 972
87 Ga0157371_10030299 3300013102 Bacteria 3903
88 Ga0157371_10324436 3300013102 Bacteria 1118
89 Ga0157370_10017266 3300013104 Bacteria 7285
90 Ga0157370_10736385 3300013104 Bacteria 899
91 Ga0157369_10034257 3300013105 Bacteria 5575
92 Ga0163162_10039324 3300013306 Bacteria 4726
93 Ga0157372_10041365 3300013307 Bacteria 5096
94 Ga0163163_10470373 3300014325 Bacteria 1318
95 Ga0157379_10149655 3300014968 Bacteria 2105
96 Ga0209050_1001670 3300025298 Bacteria 22344
97 Ga0207697_10026586 3300025315 Bacteria 2366
98 Ga0207697_10064044 3300025315 Bacteria 1533
99 Ga0207713_1002007 3300025735 Bacteria 15286
100 Ga0207645_10044212 3300025907 Bacteria 2851
101 Ga0207705_10003114 3300025909 Bacteria 12655
102 Ga0207705_10075313 3300025909 Bacteria 2451
103 Ga0207707_10037196 3300025912 Bacteria 4252
104 Ga0207660_10111644 3300025917 Bacteria 2058
105 Ga0207657_10003054 3300025919 Bacteria 17907
106 Ga0207657_10019415 3300025919 Bacteria 6455
107 Ga0207652_10003381 3300025921 Bacteria 13180
108 Ga0207652_10014392 3300025921 Bacteria 6409
109 Ga0207652_10316238 3300025921 Bacteria 1409
110 Ga0207681_10000201 3300025923 Bacteria 47717
111 Ga0207681_10000609 3300025923 Bacteria 24114
112 Ga0207650_10103386 3300025925 Bacteria 2196
113 Ga0207650_10338441 3300025925 Bacteria 1235
114 Ga0207644_10000072 3300025931 Bacteria 74508
115 Ga0207644_10012395 3300025931 Bacteria 5661
116 Ga0207690_10011832 3300025932 Bacteria 5218
117 Ga0207690_10312908 3300025932 Bacteria 1232
118 Ga0207690_10358257 3300025932 Bacteria 1155
119 Ga0207706_10000798 3300025933 Bacteria 32625
120 Ga0207706_10019850 3300025933 Bacteria 6041
121 Ga0207711_10000177 3300025941 Bacteria 68724
122 Ga0207711_10137477 3300025941 Bacteria 2196
123 Ga0207661_10042765 3300025944 Bacteria 3573
124 Ga0207679_10030185 3300025945 Bacteria 3783
125 Ga0207667_10238978 3300025949 Bacteria 1859
126 Ga0207667_10487630 3300025949 Bacteria 1251
127 Ga0207712_10382439 3300025961 Bacteria 1178
128 Ga0207668_10039531 3300025972 Bacteria 3176
129 Ga0207668_10084240 3300025972 Bacteria 2316
130 Ga0207668_10111217 3300025972 Bacteria 2056
131 Ga0207640_10001711 3300025981 Bacteria 11766
132 Ga0207658_10002347 3300025986 Bacteria 13904
133 Ga0207658_10055772 3300025986 Bacteria 2930
134 Ga0207658_10124574 3300025986 Bacteria 2060
135 Ga0207658_10236776 3300025986 Bacteria 1544
136 Ga0207703_10003189 3300026035 Bacteria 13804
137 Ga0207703_10052507 3300026035 Bacteria 3310
138 Ga0207639_10007646 3300026041 Bacteria 7375
139 Ga0207678_10003188 3300026067 Bacteria 14838
140 Ga0207678_10032673 3300026067 Bacteria 4536
141 Ga0207702_10245287 3300026078 Bacteria 1680
142 Ga0207641_10001948 3300026088 Bacteria 19799
143 Ga0207676_10012528 3300026095 Bacteria 6079
144 Ga0207674_10039278 3300026116 Bacteria 4908
145 Ga0207698_10134027 3300026142 Bacteria 2122
146 Ga0207698_10530032 3300026142 Bacteria 1151
147 Ga0209281_1006981 3300027111 Bacteria 2869
148 Ga0209983_1046959 3300027665 Bacteria 941
149 Ga0209813_10000211 3300027866 Bacteria 18037
150 Ga0209974_10011313 3300027876 Bacteria 3000
151 Ga0209974_10025362 3300027876 Bacteria 1962
152 Ga0209974_10044826 3300027876 Bacteria 1476
153 Ga0268266_10003372 3300028379 Bacteria 15991
154 Ga0268265_10042214 3300028380 Bacteria 3382
155 Ga0268264_10006185 3300028381 Bacteria 10113
156 Ga0268264_10007208 3300028381 Bacteria 9313
157 Ga0268264_10117298 3300028381 Bacteria 2341
158 Ga0307508_10009530 3300031616 Bacteria 8923
159 Ga0307405_10021225 3300031731 Bacteria 3647
160 Ga0307405_10301159 3300031731 Bacteria 1216
161 Ga0307413_10089999 3300031824 Bacteria 1995
162 Ga0307410_10355451 3300031852 Bacteria 1172
163 Ga0307406_10106313 3300031901 Bacteria 1922
164 Ga0307406_10724902 3300031901 Bacteria 832
165 Ga0307407_10198159 3300031903 Bacteria 1344
166 Ga0307412_10024646 3300031911 Bacteria 3715
167 Ga0307412_10241262 3300031911 Bacteria 1398
168 Ga0307412_10813830 3300031911 Bacteria 812
169 Ga0307412_10897738 3300031911 Bacteria 776
170 Ga0307409_100201532 3300031995 Bacteria 1781
171 Ga0307409_100798322 3300031995 Bacteria 951
172 Ga0307409_100911271 3300031995 Bacteria 893
173 Ga0307416_100158594 3300032002 Bacteria 2087
174 Ga0307414_10054028 3300032004 Bacteria 2805
175 Ga0307414_10182434 3300032004 Bacteria 1689
176 Ga0307414_10433903 3300032004 Bacteria 1148
177 Ga0307414_11010926 3300032004 Bacteria 765
178 Ga0307411_10295879 3300032005 Bacteria 1296
179 Ga0307411_10592354 3300032005 Bacteria 952
180 Ga0307411_10760085 3300032005 Bacteria 850
181 Ga0373928_0020025 3300035084 Bacteria 1400
182 Ga0373961_0067902 3300035241 Bacteria 1097
183 Ga0373931_0348019 3300035691 Bacteria 927
184 Ga0451853_3347773 3300041512 Bacteria 1271
185 Ga0439462_0000965 3300042015 Bacteria 6115
186 Ga0450890_010948 3300042127 Bacteria 1169
187 Ga0451577_0493593 3300042876 Bacteria 1112
188 Ga0451576_0000017 3300045051 Bacteria 558261
189 Ga0495627_000307 3300046453 Bacteria 48478
190 Ga0495650_0000597 3300046471 Bacteria 49626
191 Ga0495605_0026622 3300046474 Bacteria 3005
192 Ga0495596_0000037 3300046500 Bacteria 95549
193 Ga0495596_0003844 3300046500 Bacteria 7462
194 Ga0495607_0062376 3300046501 Bacteria 2113
195 Ga0495606_0014333 3300046507 Bacteria 6198
196 Ga0495610_0000015 3300046512 Bacteria 391489
197 Ga0495610_0001049 3300046512 Bacteria 25401
198 Ga0495610_0001472 3300046512 Bacteria 20775
199 Ga0495620_0075845 3300046515 Bacteria 1367
200 Ga0495631_0124997 3300046518 Bacteria 1106
201 Ga0495632_0000323 3300046519 Bacteria 46130
202 Ga0495643_0000543 3300046522 Bacteria 46756
203 Ga0495643_0048184 3300046522 Bacteria 2305
204 Ga0495654_0138361 3300046530 Bacteria 1087
205 Ga0495609_0032376 3300046538 Bacteria 2374
206 Ga0495633_0057875 3300046558 Bacteria 1820
207 Ga0495625_0009810 3300046660 Bacteria 7966
208 Ga0495683_0184625 3300047323 Bacteria 950
209 Ga0495681_0000062 3300047470 Bacteria 99851
210 Ga0495686_0005331 3300047472 Bacteria 10185
211 Ga0495686_0007850 3300047472 Bacteria 7932
212 Ga0495686_0316040 3300047472 Bacteria 857
213 Ga0495615_0000117 3300048090 Bacteria 20233
214 Ga0495626_0000346 3300048091 Bacteria 48769
215 Ga0496100_0126009 3300048903 Bacteria 1797
216 Ga0496101_0220265 3300048904 Bacteria 1472
217 Ga0496102_0040078 3300048905 Bacteria 4236
218 Ga0496103_0008727 3300048906 Bacteria 6015
219 Ga0496103_0486808 3300048906 Bacteria 790
220 Ga0496104_0662436 3300048907 Bacteria 952
221 Ga0496106_0015178 3300048909 Bacteria 5700
222 Ga0496107_0041552 3300048910 Bacteria 3301
223 Ga0496108_0042044 3300048911 Bacteria 3814
224 Ga0496112_0298205 3300048915 Bacteria 1557
225 Ga0496114_0022605 3300048917 Bacteria 5126
226 Ga0496116_0000045 3300048919 Bacteria 324307
227 Ga0496116_0057869 3300048919 Bacteria 2531
228 Ga0496117_0057360 3300048920 Bacteria 2705
229 Ga0496118_0016143 3300048921 Bacteria 6867
230 Ga0496118_0038107 3300048921 Bacteria 3857
231 Ga0496121_0001186 3300048924 Bacteria 45618
232 Ga0496121_0011241 3300048924 Bacteria 9975
233 Ga0496122_0006402 3300048925 Bacteria 13530
234 Ga0496122_0006623 3300048925 Bacteria 13212
235 Ga0496122_0122315 3300048925 Bacteria 1675
236 Ga0496123_0000731 3300048926 Bacteria 53394
237 Ga0496123_0006282 3300048926 Bacteria 11563
238 Ga0496123_0118508 3300048926 Bacteria 1495
239 Ga0496124_0002698 3300048927 Bacteria 22692
240 Ga0496124_0011628 3300048927 Bacteria 8783
241 Ga0496124_0114016 3300048927 Bacteria 2171
242 Ga0496124_0115519 3300048927 Bacteria 2153
243 Ga0496125_0011941 3300048928 Bacteria 8651
244 Ga0496125_0193629 3300048928 Bacteria 1339
245 Ga0496125_0254431 3300048928 Bacteria 1105
246 Ga0496126_0000568 3300048929 Bacteria 70707
247 Ga0496126_0004725 3300048929 Bacteria 16074
248 Ga0496126_0020850 3300048929 Bacteria 6415
249 Ga0501043_0125125 3300049579 Bacteria 2016
250 Ga0501249_066778 3300049679 Bacteria 837
251 Ga0501044_0000250 3300049823 Bacteria 68405
252 Ga0501044_0635095 3300049823 Bacteria 958
253 nmdc:mga03683_235_c1 3300050489 Bacteria 17339
254 nmdc:mga03683_33843_c1 3300050489 Bacteria 2065
255 nmdc:mga03683_37_c1 3300050489 Bacteria 63604
256 nmdc:mga03n38_194_c1 3300050490 Bacteria 13831
257 nmdc:mga00v17_32190_c1 3300050491 Bacteria 3099
258 nmdc:mga00v17_43365_c1 3300050491 Bacteria 2709
259 nmdc:mga00v17_471502_c1 3300050491 Bacteria 815
260 nmdc:mga0yw44_236377_c1 3300050492 Bacteria 1214
261 nmdc:mga0k408_148910_c1 3300050493 Bacteria 1393
262 nmdc:mga0k408_18_c1 3300050493 Bacteria 112318
263 nmdc:mga0k408_63362_c1 3300050493 Bacteria 2151
264 nmdc:mga0k408_68322_c1 3300050493 Bacteria 2073
265 nmdc:mga06z11_128_c1 3300050494 Bacteria 31165
266 nmdc:mga04h51_242_c1 3300050495 Bacteria 14265
267 nmdc:mga07m45_19_c1 3300050496 Bacteria 133476
268 nmdc:mga07m45_418_c1 3300050496 Bacteria 17625
269 nmdc:mga07m45_4658_c1 3300050496 Bacteria 6730
270 nmdc:mga07m45_53111_c1 3300050496 Bacteria 2289
271 nmdc:mga07m45_92196_c1 3300050496 Bacteria 1736
272 nmdc:mga0sz30_12945_c1 3300050516 Bacteria 3256
273 nmdc:mga0sz30_304_c1 3300050516 Bacteria 18916
274 nmdc:mga0sz30_33640_c1 3300050516 Bacteria 2131
275 Ga0500647_0055693 3300053091 Bacteria 1902
276 Ga0500555_081476 3300053103 Bacteria 841
277 Ga0500594_0066317 3300053118 Bacteria 1052
278 Ga0500607_000052 3300053121 Bacteria 80355
279 Ga0500607_000152 3300053121 Bacteria 59345
280 Ga0500608_000075 3300053122 Bacteria 42447
281 Ga0500559_0000524 3300053136 Bacteria 26811
282 Ga0500559_0037194 3300053136 Bacteria 2109
283 Ga0500564_003052 3300053138 Bacteria 6393
284 Ga0500564_203762 3300053138 Bacteria 811
285 Ga0500590_000633 3300053148 Bacteria 12507
286 Ga0500567_000434 3300053723 Bacteria 14029
287 Ga0500625_000004 3300053729 Bacteria 245905
288 Ga0500645_001889 3300053730 Bacteria 10000
289 Ga0500645_014082 3300053730 Bacteria 2555
290 2739650732 2739367664 Bacteria 4114334
291 2511126589 2510917021 Bacteria 5705459
292 2643951321 2643221588 Bacteria 3692460
293 2738711163 2738541275 Bacteria 4830863
294 2738849588 2738541301 Bacteria 4834102
295 2738865317 2738541304 Bacteria 4833665
296 2739297835 2738543022 Bacteria 4835059
297 2739359513 2738543033 Bacteria 4833336
298 2740029205 2739367865 Bacteria 4114482
299 2819551321 2818991438 Bacteria 5793701
300 2848299593 2848297114 Bacteria 3608511
301 2882808982 2882806704 Bacteria 3007728
302 2895882275 2895880812 Bacteria 11255272
303 2919139106 2919138771 Bacteria 5281312
304 2928104343 2928100450 Bacteria 4837635
305 2928961551 2928959182 Bacteria 4725774
306 3000867271 3000865235 Bacteria 3106258
307 8054305404 8054302542 Bacteria 5698134
308 SwRhRL2b_contig_802780
309 JGI24751J29686_10000790
310 Ga0065704_10118317
311 Ga0065707_10086751
312 Ga0070658_10011640
313 Ga0070658_10017099
314 Ga0070676_10073604
315 Ga0070683_100004264
316 Ga0070690_100182237
317 Ga0070670_100039490
318 Ga0070670_100057674
319 Ga0070666_10196487
320 Ga0070680_100026459
321 Ga0070680_100320310
322 Ga0070661_100028458
323 Ga0070668_100049542
324 Ga0070668_100053916
325 Ga0070668_100127625
326 Ga0070669_100000721
327 Ga0070669_100024671
328 Ga0070671_100000100
329 Ga0070659_100016181
330 Ga0070659_100038166
331 Ga0070659_100310851
332 Ga0070659_100404366
333 Ga0070667_100068003
334 Ga0070667_100107669
335 Ga0070667_100911985
336 Ga0070708_100959250
337 Ga0070663_100011070
338 Ga0070662_100085254
339 Ga0070662_100168394
340 Ga0070681_10026436
341 Ga0070679_100050905
342 Ga0070679_100102084
343 Ga0070684_100566116
344 Ga0068853_100024865
345 Ga0070686_100008361
346 Ga0070665_100003844
347 Ga0070665_100016231
348 Ga0070665_100016418
349 Ga0068855_100342414
350 Ga0068855_100560336
351 Ga0070664_100030403
352 Ga0070664_100061533
353 Ga0068857_100046630
354 Ga0068857_100068417
355 Ga0068854_100005934
356 Ga0068854_100016828
357 Ga0068856_100238303
358 Ga0068852_100063123
359 Ga0068859_100017336
360 Ga0068864_100052055
361 Ga0068863_100040710
362 Ga0068858_100060021
363 Ga0068860_100004487
364 Ga0068860_100015280
365 Ga0068860_100025171
366 Ga0068862_100033766
367 Ga0075365_10136663
368 Ga0075368_10000270
369 Ga0075363_100005672
370 Ga0075363_100273305
371 Ga0075364_10051824
372 Ga0075364_10365804
373 Ga0075362_10000011
374 Ga0075362_10003071
375 Ga0075362_10020044
376 Ga0075367_10036064
377 Ga0075369_10012913
378 Ga0075369_10014776
379 Ga0075369_10076428
380 Ga0075366_10000049
381 Ga0075366_10013830
382 Ga0075366_10051299
383 Ga0075366_10127036
384 Ga0075366_10366090
385 Ga0075370_10000004
386 Ga0097620_100017336
387 Ga0079104_1020110
388 Ga0105247_10016243
389 Ga0105247_10299081
390 Ga0105248_10000415
391 Ga0105248_10076920
392 Ga0105248_10185092
393 Ga0105249_10861747
394 Ga0157371_10030299
395 Ga0157371_10324436
396 Ga0157370_10017266
397 Ga0157370_10736385
398 Ga0157369_10034257
399 Ga0163162_10039324
400 Ga0157372_10041365
401 Ga0163163_10470373
402 Ga0157379_10149655
403 Ga0209050_1001670
404 Ga0207697_10026586
405 Ga0207697_10064044
406 Ga0207713_1002007
407 Ga0207645_10044212
408 Ga0207705_10003114
409 Ga0207705_10075313
410 Ga0207707_10037196
411 Ga0207660_10111644
412 Ga0207657_10003054
413 Ga0207657_10019415
414 Ga0207652_10003381
415 Ga0207652_10014392
416 Ga0207652_10316238
417 Ga0207681_10000201
418 Ga0207681_10000609
419 Ga0207650_10103386
420 Ga0207650_10338441
421 Ga0207644_10000072
422 Ga0207644_10012395
423 Ga0207690_10011832
424 Ga0207690_10312908
425 Ga0207690_10358257
426 Ga0207706_10000798
427 Ga0207706_10019850
428 Ga0207711_10000177
429 Ga0207711_10137477
430 Ga0207661_10042765
431 Ga0207679_10030185
432 Ga0207667_10238978
433 Ga0207667_10487630
434 Ga0207712_10382439
435 Ga0207668_10039531
436 Ga0207668_10084240
437 Ga0207668_10111217
438 Ga0207640_10001711
439 Ga0207658_10002347
440 Ga0207658_10055772
441 Ga0207658_10124574
442 Ga0207658_10236776
443 Ga0207703_10003189
444 Ga0207703_10052507
445 Ga0207639_10007646
446 Ga0207678_10003188
447 Ga0207678_10032673
448 Ga0207702_10245287
449 Ga0207641_10001948
450 Ga0207676_10012528
451 Ga0207674_10039278
452 Ga0207698_10134027
453 Ga0207698_10530032
454 Ga0209281_1006981
455 Ga0209983_1046959
456 Ga0209813_10000211
457 Ga0209974_10011313
458 Ga0209974_10025362
459 Ga0209974_10044826
460 Ga0268266_10003372
461 Ga0268265_10042214
462 Ga0268264_10006185
463 Ga0268264_10007208
464 Ga0268264_10117298
465 Ga0307508_10009530
466 Ga0307405_10021225
467 Ga0307405_10301159
468 Ga0307413_10089999
469 Ga0307410_10355451
470 Ga0307406_10106313
471 Ga0307406_10724902
472 Ga0307407_10198159
473 Ga0307412_10024646
474 Ga0307412_10241262
475 Ga0307412_10813830
476 Ga0307412_10897738
477 Ga0307409_100201532
478 Ga0307409_100798322
479 Ga0307409_100911271
480 Ga0307416_100158594
481 Ga0307414_10054028
482 Ga0307414_10182434
483 Ga0307414_10433903
484 Ga0307414_11010926
485 Ga0307411_10295879
486 Ga0307411_10592354
487 Ga0307411_10760085
488 Ga0373928_0020025
489 Ga0373961_0067902
490 Ga0373931_0348019
491 Ga0451853_3347773
492 Ga0439462_0000965
493 Ga0450890_010948
494 Ga0451577_0493593
495 Ga0451576_0000017
496 Ga0495627_000307
497 Ga0495650_0000597
498 Ga0495605_0026622
499 Ga0495596_0000037
500 Ga0495596_0003844
501 Ga0495607_0062376
502 Ga0495606_0014333
503 Ga0495610_0000015
504 Ga0495610_0001049
505 Ga0495610_0001472
506 Ga0495620_0075845
507 Ga0495631_0124997
508 Ga0495632_0000323
509 Ga0495643_0000543
510 Ga0495643_0048184
511 Ga0495654_0138361
512 Ga0495609_0032376
513 Ga0495633_0057875
514 Ga0495625_0009810
515 Ga0495683_0184625
516 Ga0495681_0000062
517 Ga0495686_0005331
518 Ga0495686_0007850
519 Ga0495686_0316040
520 Ga0495615_0000117
521 Ga0495626_0000346
522 Ga0496100_0126009
523 Ga0496101_0220265
524 Ga0496102_0040078
525 Ga0496103_0008727
526 Ga0496103_0486808
527 Ga0496104_0662436
528 Ga0496106_0015178
529 Ga0496107_0041552
530 Ga0496108_0042044
531 Ga0496112_0298205
532 Ga0496114_0022605
533 Ga0496116_0000045
534 Ga0496116_0057869
535 Ga0496117_0057360
536 Ga0496118_0016143
537 Ga0496118_0038107
538 Ga0496121_0001186
539 Ga0496121_0011241
540 Ga0496122_0006402
541 Ga0496122_0006623
542 Ga0496122_0122315
543 Ga0496123_0000731
544 Ga0496123_0006282
545 Ga0496123_0118508
546 Ga0496124_0002698
547 Ga0496124_0011628
548 Ga0496124_0114016
549 Ga0496124_0115519
550 Ga0496125_0011941
551 Ga0496125_0193629
552 Ga0496125_0254431
553 Ga0496126_0000568
554 Ga0496126_0004725
555 Ga0496126_0020850
556 Ga0501043_0125125
557 Ga0501249_066778
558 Ga0501044_0000250
559 Ga0501044_0635095
560 nmdc:mga03683_235_c1
561 nmdc:mga03683_33843_c1
562 nmdc:mga03683_37_c1
563 nmdc:mga03n38_194_c1
564 nmdc:mga00v17_32190_c1
565 nmdc:mga00v17_43365_c1
566 nmdc:mga00v17_471502_c1
567 nmdc:mga0yw44_236377_c1
568 nmdc:mga0k408_148910_c1
569 nmdc:mga0k408_18_c1
570 nmdc:mga0k408_63362_c1
571 nmdc:mga0k408_68322_c1
572 nmdc:mga06z11_128_c1
573 nmdc:mga04h51_242_c1
574 nmdc:mga07m45_19_c1
575 nmdc:mga07m45_418_c1
576 nmdc:mga07m45_4658_c1
577 nmdc:mga07m45_53111_c1
578 nmdc:mga07m45_92196_c1
579 nmdc:mga0sz30_12945_c1
580 nmdc:mga0sz30_304_c1
581 nmdc:mga0sz30_33640_c1
582 Ga0500647_0055693
583 Ga0500555_081476
584 Ga0500594_0066317
585 Ga0500607_000052
586 Ga0500607_000152
587 Ga0500608_000075
588 Ga0500559_0000524
589 Ga0500559_0037194
590 Ga0500564_003052
591 Ga0500564_203762
592 Ga0500590_000633
593 Ga0500567_000434
594 Ga0500625_000004
595 Ga0500645_001889
596 Ga0500645_014082
597 2739650732
598 2511126589
599 2643951321
600 2738711163
601 2738849588
602 2738865317
603 2739297835
604 2739359513
605 2740029205
606 2819551321
607 2848299593
608 2882808982
609 2895882275
610 2919139106
611 2928104343
612 2928961551
613 3000867271
614 8054305404

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00849

PseudoU_synth_2

RNA pseudouridylate synthase

8

163

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vbb-assembly1.cif.gz_A human rna pseudouridylate synthase domain containing 1 0.7825 2 196
2i82-assembly2.cif.gz_B crystal structure of pseudouridine synthase rlua: indirect sequence readout through protein-induced rna structure 0.777 3 194
7aoi-assembly1.cif.gz_XP trypanosoma brucei mitochondrial ribosome large subunit assembly intermediate 0.7723 5 207
1prz-assembly1.cif.gz_A crystal structure of pseudouridine synthase rlud catalytic module 0.7662 1 202
7am2-assembly1.cif.gz_BZ intermediate assembly of the large subunit from leishmania major mitochondrial ribosome 0.7659 5 207
ID Description Score Start End Superfamily
af_Q2FZ78_82_304_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.8064 4 202 3.30.2350.10
af_Q8VCZ8_2_228_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.8009 2 195 3.30.2350.10
af_I1NHE4_86_352_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.7928 2 196 3.30.2350.10
af_P9WHQ3_81_307_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.7884 5 200 3.30.2350.10
af_Q69K07_177_348_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.7859 5 145 3.30.2350.10
ID Description Score Start End GO Terms
AF-A0A3D0WLA6-F1-model_v4 deleted 0.9963 1 69
AF-A0A3D0WLA6-F1-model_v4 deleted 0.955 1 69
AF-A0A6I1J8X1-F1-model_v4 Pseudouridine synthase RsuA/RluA-like domain-containing protein 0.9378 4 73 GO:0000455
GO:0003723
GO:0009982
GO:0140098
AF-A0A0N0KCL5-F1-model_v4 Pseudouridine synthase 0.9003 1 207 GO:0000455
GO:0003723
GO:0009982
GO:0140098
AF-A0A0N0KCL5-F1-model_v4 Pseudouridine synthase 0.8961 1 207 GO:0000455
GO:0003723
GO:0009982
GO:0140098

Map