F398997

General Info

Members Datasets Scaffolds Average Seq Length
307 228 614 240

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100118573|Ga0070683_1001185732
Length 263
Sequence MVNARQNLDLTTFASPTGGGVEWRISDQPVDYLEAVAAMEARAAAIAEGRANELVWLLEHPPLYTSGTSGNAGDLLDPRFPLFATGRGGQLTYHGPGQRVAYVMLDLKRRRPDVRAYVAALEEWIIRTLAAFNVRGERREDRVGVWVKRPDKGDGFEDKIAAIGVRLRRWVSFHGIAINVEPQLAHFSAIVPCGVADPHFGVTSMVDLGHPVGLADVDVGLKQAFEEVFGPIEVPHPNAATRPPKKSPGMEPDPLPARLGSLR

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
94 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
95 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
96 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
97 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
98 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
99 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
100 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
101 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
102 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
103 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
104 3300033544 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 Metagenome Unclassified
105 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
106 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
107 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
108 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
109 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
110 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
111 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
112 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
113 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
116 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
119 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
120 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
127 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
128 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
129 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
130 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
133 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
136 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
137 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
138 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
139 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
140 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
141 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
142 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
143 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
144 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
145 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
146 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
147 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
148 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
149 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
150 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
151 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
152 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
153 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
154 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
155 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
156 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
157 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
158 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
159 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
164 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
165 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
168 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
169 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
170 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
171 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
172 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
173 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
174 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
175 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
184 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
189 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
190 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
191 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
192 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
193 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
194 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
195 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
196 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
197 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
198 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
199 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
202 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
203 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
204 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
205 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
206 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
207 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
208 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
209 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
210 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
211 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
212 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
213 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
214 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
215 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
216 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
217 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
218 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
219 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
220 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
221 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
222 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
223 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
224 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
225 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
226 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
227 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
228 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.42
Metatranscriptomes 0.98
Isolates 2.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.17
Nodule 1.3
Rhizoplane 11.4
Rhizosphere 77.2
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100118573 3300005329 Bacteria 2499
2 Ga0070670_100085444 3300005331 Bacteria 2711
3 Ga0070682_100107057 3300005337 Bacteria 1856
4 Ga0070691_10024124 3300005341 Bacteria 2827
5 Ga0070661_100343420 3300005344 Bacteria 1170
6 Ga0070668_100025762 3300005347 Bacteria 4460
7 Ga0070671_100026052 3300005355 Bacteria 4803
8 Ga0070673_100078501 3300005364 Bacteria 2671
9 Ga0070667_100284498 3300005367 Bacteria 1486
10 Ga0070709_10002022 3300005434 Bacteria 11017
11 Ga0070709_10027064 3300005434 Bacteria 3406
12 Ga0070714_100049497 3300005435 Bacteria 3577
13 Ga0070713_100025039 3300005436 Bacteria 4659
14 Ga0070710_10017312 3300005437 Bacteria 3684
15 Ga0070711_100365677 3300005439 Bacteria 1163
16 Ga0070678_100012310 3300005456 Bacteria 5312
17 Ga0070681_10025964 3300005458 Bacteria 5889
18 Ga0070681_10163753 3300005458 Bacteria 2147
19 Ga0070681_10610356 3300005458 Bacteria 1005
20 Ga0070685_10047414 3300005466 Bacteria 2471
21 Ga0070698_100109894 3300005471 Bacteria 2723
22 Ga0070679_100057603 3300005530 Bacteria 3873
23 Ga0070679_100130636 3300005530 Bacteria 2493
24 Ga0070684_100391716 3300005535 Bacteria 1280
25 Ga0070684_100641271 3300005535 Bacteria 988
26 Ga0070665_100068729 3300005548 Bacteria 3551
27 Ga0068855_100341270 3300005563 Bacteria 1651
28 Ga0068855_100438458 3300005563 Bacteria 1427
29 Ga0070702_100105240 3300005615 Bacteria 1739
30 Ga0068859_100137068 3300005617 Bacteria 2521
31 Ga0068870_10421746 3300005840 Bacteria 873
32 Ga0081455_10001244 3300005937 Bacteria 31846
33 Ga0081455_10028187 3300005937 Bacteria 5134
34 Ga0081540_1001804 3300005983 Bacteria 17954
35 Ga0081540_1065086 3300005983 Bacteria 1716
36 Ga0070717_10000873 3300006028 Bacteria 19937
37 Ga0075365_10547156 3300006038 Bacteria 819
38 Ga0075368_10006629 3300006042 Bacteria 4059
39 Ga0075368_10187193 3300006042 Bacteria 874
40 Ga0075364_10003574 3300006051 Bacteria 8852
41 Ga0070715_10037207 3300006163 Bacteria 2013
42 Ga0070716_100002585 3300006173 Bacteria 8361
43 Ga0075367_10004081 3300006178 Bacteria 7068
44 Ga0075366_10262874 3300006195 Bacteria 1053
45 Ga0097621_100087885 3300006237 Bacteria 2596
46 Ga0075370_10046036 3300006353 Bacteria 2468
47 Ga0068871_100063498 3300006358 Bacteria 3021
48 Ga0075430_100000050 3300006846 Bacteria 61220
49 Ga0097620_100137077 3300006931 Bacteria 2521
50 Ga0075435_100374117 3300007076 Bacteria 1223
51 Ga0105240_10202179 3300009093 Bacteria 2327
52 Ga0105240_10314980 3300009093 Bacteria 1785
53 Ga0105240_10517631 3300009093 Bacteria 1324
54 Ga0105240_10609811 3300009093 Bacteria 1201
55 Ga0111539_10322985 3300009094 Bacteria 1796
56 Ga0111539_10511324 3300009094 Bacteria 1399
57 Ga0105245_10075765 3300009098 Bacteria 3064
58 Ga0105247_10011469 3300009101 Bacteria 5343
59 Ga0105241_10017794 3300009174 Bacteria 5227
60 Ga0105248_10069678 3300009177 Bacteria 3949
61 Ga0105248_10169026 3300009177 Bacteria 2464
62 Ga0105248_10493643 3300009177 Bacteria 1380
63 Ga0105237_10163015 3300009545 Bacteria 2228
64 Ga0105237_10251470 3300009545 Bacteria 1769
65 Ga0105239_10049378 3300010375 Bacteria 4614
66 Ga0105239_10579642 3300010375 Bacteria 1279
67 Ga0105239_10673905 3300010375 Bacteria 1182
68 Ga0105246_10021184 3300011119 Bacteria 4180
69 Ga0157369_10003311 3300013105 Bacteria 19148
70 Ga0157369_10021390 3300013105 Bacteria 7236
71 Ga0157369_10031769 3300013105 Bacteria 5809
72 Ga0157369_10973214 3300013105 Bacteria 869
73 Ga0157374_10018660 3300013296 Bacteria 6126
74 Ga0157378_10808667 3300013297 Bacteria 963
75 Ga0163162_10090888 3300013306 Bacteria 3135
76 Ga0163162_10241001 3300013306 Bacteria 1939
77 Ga0163162_10937214 3300013306 Bacteria 977
78 Ga0157372_10052498 3300013307 Bacteria 4540
79 Ga0157372_10152467 3300013307 Bacteria 2668
80 Ga0163163_10057556 3300014325 Bacteria 3844
81 Ga0157379_10602779 3300014968 Bacteria 1025
82 Ga0157376_10061049 3300014969 Bacteria 3168
83 Ga0157376_10074118 3300014969 Bacteria 2901
84 Ga0197907_10315196 3300020069 Bacteria 2507
85 Ga0206353_10968020 3300020082 Bacteria 1018
86 Ga0224712_10013481 3300022467 Bacteria 2604
87 Ga0209455_1004916 3300025272 Bacteria 4248
88 Ga0207713_1021008 3300025735 Bacteria 3140
89 Ga0207692_10030854 3300025898 Bacteria 2561
90 Ga0207710_10006419 3300025900 Bacteria 5021
91 Ga0207685_10007286 3300025905 Bacteria 3073
92 Ga0207685_10069504 3300025905 Bacteria 1422
93 Ga0207699_10005454 3300025906 Bacteria 6087
94 Ga0207654_10375992 3300025911 Bacteria 983
95 Ga0207707_10003577 3300025912 Bacteria 13781
96 Ga0207707_10013335 3300025912 Bacteria 7163
97 Ga0207707_10026857 3300025912 Bacteria 5031
98 Ga0207695_10272668 3300025913 Bacteria 1587
99 Ga0207671_10048521 3300025914 Bacteria 3143
100 Ga0207671_10078178 3300025914 Bacteria 2477
101 Ga0207671_10299013 3300025914 Bacteria 1271
102 Ga0207671_10309478 3300025914 Bacteria 1249
103 Ga0207693_10019742 3300025915 Bacteria 5358
104 Ga0207663_10427749 3300025916 Bacteria 1017
105 Ga0207649_10094802 3300025920 Bacteria 1962
106 Ga0207652_10214867 3300025921 Bacteria 1732
107 Ga0207694_10034710 3300025924 Bacteria 3868
108 Ga0207694_10129150 3300025924 Bacteria 2025
109 Ga0207650_10312886 3300025925 Bacteria 1285
110 Ga0207687_10003408 3300025927 Bacteria 10725
111 Ga0207700_10013168 3300025928 Bacteria 5369
112 Ga0207700_10252357 3300025928 Bacteria 1507
113 Ga0207664_10052693 3300025929 Bacteria 3218
114 Ga0207664_10081946 3300025929 Bacteria 2627
115 Ga0207709_10623830 3300025935 Bacteria 856
116 Ga0207665_10004283 3300025939 Bacteria 9483
117 Ga0207665_10007965 3300025939 Bacteria 6996
118 Ga0207711_10171355 3300025941 Bacteria 1969
119 Ga0207661_10019810 3300025944 Bacteria 5020
120 Ga0207661_10248207 3300025944 Bacteria 1581
121 Ga0207661_10343532 3300025944 Bacteria 1345
122 Ga0207667_10141593 3300025949 Bacteria 2476
123 Ga0207658_10050905 3300025986 Bacteria 3050
124 Ga0207676_10004875 3300026095 Bacteria 9497
125 Ga0207674_10439912 3300026116 Bacteria 1260
126 Ga0207683_10072945 3300026121 Bacteria 3036
127 Ga0207698_10055495 3300026142 Bacteria 3054
128 Ga0209813_10011016 3300027866 Bacteria 2354
129 Ga0268266_10162253 3300028379 Bacteria 2023
130 Ga0265337_1003724 3300028556 Bacteria 6513
131 Ga0265332_10001295 3300031238 Bacteria 14298
132 Ga0265329_10071719 3300031242 Bacteria 1096
133 Ga0265340_10007359 3300031247 Bacteria 5981
134 Ga0265339_10001201 3300031249 Bacteria 19519
135 Ga0265339_10039155 3300031249 Bacteria 2641
136 Ga0265331_10090643 3300031250 Bacteria 1413
137 Ga0265316_10248976 3300031344 Bacteria 1305
138 Ga0265313_10008974 3300031595 Bacteria 6559
139 Ga0307508_10000020 3300031616 Bacteria 188730
140 Ga0265314_10062047 3300031711 Bacteria 2542
141 Ga0265314_10206388 3300031711 Bacteria 1157
142 Ga0265342_10000137 3300031712 Bacteria 81963
143 Ga0316215_1007212 3300033544 Bacteria 1083
144 Ga0373934_0094266 3300035086 Bacteria 1208
145 Ga0373944_0059017 3300035089 Bacteria 1227
146 Ga0373923_0011271 3300035111 Bacteria 3274
147 Ga0373945_0003195 3300035116 Bacteria 5141
148 Ga0373953_0028718 3300035117 Bacteria 2147
149 Ga0373943_0014690 3300035170 Bacteria 3550
150 Ga0373943_0075446 3300035170 Bacteria 1717
151 Ga0373946_0003109 3300035171 Bacteria 5883
152 Ga0373962_0075194 3300035242 Bacteria 1016
153 Ga0373931_0048659 3300035691 Bacteria 2248
154 Ga0373927_0025944 3300035695 Bacteria 3830
155 Ga0373927_0139270 3300035695 Bacteria 1586
156 Ga0373927_0369572 3300035695 Bacteria 945
157 Ga0373933_0061987 3300035724 Bacteria 2257
158 Ga0373947_0429995 3300035725 Bacteria 893
159 Ga0373937_0006601 3300036401 Bacteria 10020
160 Ga0373937_0041702 3300036401 Bacteria 4187
161 Ga0373937_0509441 3300036401 Bacteria 1143
162 Ga0316582_0428195 3300036647 Bacteria 912
163 Ga0316584_0219073 3300036712 Bacteria 1399
164 Ga0373925_0078027 3300037068 Bacteria 2514
165 Ga0373925_0295234 3300037068 Bacteria 1307
166 Ga0395899_0317605 3300037312 Bacteria 1050
167 Ga0395900_0014536 3300037418 Bacteria 8033
168 Ga0395898_0010480 3300037466 Bacteria 9689
169 Ga0395905_0163877 3300037471 Bacteria 2089
170 Ga0395901_0346066 3300038443 Bacteria 1535
171 Ga0450923_070841 3300042125 Bacteria 773
172 Ga0466966_0149744 3300044684 Bacteria 1424
173 Ga0466963_0166454 3300044694 Bacteria 1536
174 Ga0466959_0143166 3300045049 Bacteria 1688
175 Ga0466958_0435822 3300045836 Bacteria 848
176 Ga0466967_0380771 3300045976 Bacteria 1370
177 Ga0495603_0082733 3300046455 Bacteria 1880
178 Ga0495651_0074512 3300046462 Bacteria 2575
179 Ga0495580_0133185 3300046472 Bacteria 1723
180 Ga0495582_0002319 3300046473 Bacteria 10670
181 Ga0495582_0013792 3300046473 Bacteria 4449
182 Ga0495639_0009925 3300046475 Bacteria 4090
183 Ga0495662_0071093 3300046476 Bacteria 1686
184 Ga0495610_0128441 3300046512 Bacteria 1103
185 Ga0495618_0034058 3300046514 Bacteria 3193
186 Ga0495628_0443210 3300046516 Bacteria 944
187 Ga0495630_0042152 3300046517 Bacteria 3409
188 Ga0495665_0076290 3300046531 Bacteria 1764
189 Ga0495640_0268887 3300046533 Bacteria 1063
190 Ga0495645_0028183 3300046543 Bacteria 4081
191 Ga0495656_0135964 3300046615 Bacteria 1174
192 Ga0495635_0090738 3300046663 Bacteria 2090
193 Ga0495588_0028345 3300046674 Bacteria 2802
194 Ga0495623_0300447 3300046679 Bacteria 887
195 Ga0495646_0032901 3300046680 Bacteria 3225
196 Ga0495647_0026252 3300046681 Bacteria 2132
197 Ga0495658_0004850 3300046683 Bacteria 6599
198 Ga0495613_0071710 3300046689 Bacteria 2525
199 Ga0495624_0036676 3300046690 Bacteria 3159
200 Ga0495624_0090983 3300046690 Bacteria 1882
201 Ga0495581_0019047 3300047315 Bacteria 3984
202 Ga0495674_0086625 3300047319 Bacteria 2681
203 Ga0495676_0115183 3300047321 Bacteria 1966
204 Ga0495680_0506208 3300047322 Bacteria 819
205 Ga0496100_0081582 3300048903 Bacteria 2185
206 Ga0496101_0206494 3300048904 Bacteria 1520
207 Ga0496101_0400249 3300048904 Bacteria 1081
208 Ga0496102_0027609 3300048905 Bacteria 5068
209 Ga0496102_0058383 3300048905 Bacteria 3525
210 Ga0496102_0382169 3300048905 Bacteria 1325
211 Ga0496102_0688684 3300048905 Bacteria 945
212 Ga0496103_0006448 3300048906 Bacteria 7003
213 Ga0496103_0339404 3300048906 Bacteria 966
214 Ga0496104_0006159 3300048907 Bacteria 10530
215 Ga0496104_0092885 3300048907 Bacteria 2885
216 Ga0496105_0380341 3300048908 Bacteria 1123
217 Ga0496106_0014405 3300048909 Bacteria 5843
218 Ga0496106_0048245 3300048909 Bacteria 3207
219 Ga0496106_0075653 3300048909 Bacteria 2579
220 Ga0496107_0003405 3300048910 Bacteria 10638
221 Ga0496107_0019604 3300048910 Bacteria 4772
222 Ga0496108_0002446 3300048911 Bacteria 14846
223 Ga0496108_0284273 3300048911 Bacteria 1440
224 Ga0496109_0007428 3300048912 Bacteria 9278
225 Ga0496109_0007673 3300048912 Bacteria 9147
226 Ga0496110_0072901 3300048913 Bacteria 3047
227 Ga0496110_0109361 3300048913 Bacteria 2482
228 Ga0496110_0303110 3300048913 Bacteria 1455
229 Ga0496111_0016804 3300048914 Bacteria 5048
230 Ga0496112_0003189 3300048915 Bacteria 13489
231 Ga0496112_0004436 3300048915 Bacteria 11886
232 Ga0496112_0023998 3300048915 Bacteria 5834
233 Ga0496113_0011936 3300048916 Bacteria 5823
234 Ga0496113_0054301 3300048916 Bacteria 2998
235 Ga0496114_0007779 3300048917 Bacteria 8482
236 Ga0496114_0351108 3300048917 Bacteria 1304
237 Ga0496115_0034701 3300048918 Bacteria 3986
238 Ga0496115_0035263 3300048918 Bacteria 3957
239 Ga0496115_0181121 3300048918 Bacteria 1741
240 Ga0496121_0005105 3300048924 Bacteria 17110
241 Ga0496121_0204167 3300048924 Bacteria 1406
242 Ga0496124_0365949 3300048927 Bacteria 1014
243 Ga0496126_0245268 3300048929 Bacteria 1494
244 Ga0501032_0022510 3300049569 Bacteria 4367
245 Ga0501033_0042036 3300049570 Bacteria 3408
246 Ga0501033_0103370 3300049570 Bacteria 2078
247 Ga0501034_0006506 3300049571 Bacteria 12562
248 Ga0501034_0552156 3300049571 Bacteria 1061
249 Ga0501036_0004587 3300049572 Bacteria 11161
250 Ga0501036_0222153 3300049572 Bacteria 1586
251 Ga0501037_0005441 3300049573 Bacteria 9276
252 Ga0501038_0033518 3300049574 Bacteria 4524
253 Ga0501039_0019960 3300049575 Bacteria 5137
254 Ga0501042_0218361 3300049578 Bacteria 1375
255 Ga0501043_0029875 3300049579 Bacteria 4281
256 Ga0501046_0003333 3300049580 Bacteria 14756
257 Ga0501046_0375771 3300049580 Bacteria 1029
258 Ga0501047_0018240 3300049581 Bacteria 6725
259 Ga0501047_0084100 3300049581 Bacteria 3058
260 Ga0501048_0011874 3300049582 Bacteria 6494
261 Ga0501067_0003337 3300049583 Bacteria 8825
262 Ga0501068_0015507 3300049584 Bacteria 4377
263 Ga0501069_0002888 3300049585 Bacteria 8819
264 Ga0501070_0016447 3300049586 Bacteria 6216
265 Ga0501070_0087516 3300049586 Bacteria 2578
266 Ga0501071_0027234 3300049587 Bacteria 4020
267 Ga0501073_0010563 3300049589 Bacteria 6761
268 Ga0501073_0045554 3300049589 Bacteria 3089
269 Ga0501074_0007244 3300049590 Bacteria 8013
270 Ga0501079_0120058 3300049741 Bacteria 2044
271 Ga0501080_0007981 3300049742 Bacteria 9590
272 Ga0501080_0053191 3300049742 Bacteria 3769
273 Ga0501083_0032128 3300049744 Bacteria 3601
274 Ga0501035_0019165 3300049822 Bacteria 6298
275 Ga0501044_0057110 3300049823 Bacteria 4005
276 Ga0501044_0113881 3300049823 Bacteria 2711
277 Ga0501045_0058374 3300049824 Bacteria 2825
278 nmdc:mga00v17_2856_c1 3300050491 Bacteria 8857
279 nmdc:mga0yw44_490107_c1 3300050492 Bacteria 834
280 nmdc:mga0k408_140363_c1 3300050493 Bacteria 1437
281 nmdc:mga06z11_200904_c1 3300050494 Bacteria 1158
282 nmdc:mga06z11_282795_c1 3300050494 Bacteria 983
283 nmdc:mga04h51_12179_c1 3300050495 Bacteria 2408
284 nmdc:mga07m45_50883_c1 3300050496 Bacteria 2336
285 nmdc:mga07m45_5160_c1 3300050496 Bacteria 6473
286 nmdc:mga0qj67_90_c1 3300050509 Bacteria 61568
287 nmdc:mga06r32_390346_c1 3300050510 Bacteria 1374
288 nmdc:mga0n895_165808_c1 3300050512 Bacteria 2241
289 nmdc:mga0n895_506761_c1 3300050512 Bacteria 1215
290 nmdc:mga0sz30_72576_c1 3300050516 Bacteria 1483
291 Ga0495601_0220581 3300053077 Bacteria 1238
292 Ga0495612_0046322 3300053078 Bacteria 1781
293 Ga0495619_0114009 3300053085 Bacteria 1849
294 Ga0500595_001592 3300053119 Bacteria 11990
295 Ga0500568_0123287 3300053139 Bacteria 965
296 Ga0500616_0077373 3300053153 Bacteria 1680
297 Ga0500627_0050994 3300053158 Bacteria 1804
298 Ga0501084_0011645 3300054114 Bacteria 7281
299 Ga0501082_0042626 3300060353 Bacteria 3912
300 2524539915 2524023228 Bacteria 10118060
301 2757570843 2757320392 Bacteria 3737298
302 2837653728 2837651117 Bacteria 3772164
303 2903772646 2903768456 Bacteria 9749579
304 2937847274 2937843397 Bacteria 5256375
305 8006942058 8006933436 Bacteria 10410654
306 8006981798 8006973647 Bacteria 10679141
307 8056694209 8056689827 Bacteria 6712655
308 Ga0070683_100118573
309 Ga0070670_100085444
310 Ga0070682_100107057
311 Ga0070691_10024124
312 Ga0070661_100343420
313 Ga0070668_100025762
314 Ga0070671_100026052
315 Ga0070673_100078501
316 Ga0070667_100284498
317 Ga0070709_10002022
318 Ga0070709_10027064
319 Ga0070714_100049497
320 Ga0070713_100025039
321 Ga0070710_10017312
322 Ga0070711_100365677
323 Ga0070678_100012310
324 Ga0070681_10025964
325 Ga0070681_10163753
326 Ga0070681_10610356
327 Ga0070685_10047414
328 Ga0070698_100109894
329 Ga0070679_100057603
330 Ga0070679_100130636
331 Ga0070684_100391716
332 Ga0070684_100641271
333 Ga0070665_100068729
334 Ga0068855_100341270
335 Ga0068855_100438458
336 Ga0070702_100105240
337 Ga0068859_100137068
338 Ga0068870_10421746
339 Ga0081455_10001244
340 Ga0081455_10028187
341 Ga0081540_1001804
342 Ga0081540_1065086
343 Ga0070717_10000873
344 Ga0075365_10547156
345 Ga0075368_10006629
346 Ga0075368_10187193
347 Ga0075364_10003574
348 Ga0070715_10037207
349 Ga0070716_100002585
350 Ga0075367_10004081
351 Ga0075366_10262874
352 Ga0097621_100087885
353 Ga0075370_10046036
354 Ga0068871_100063498
355 Ga0075430_100000050
356 Ga0097620_100137077
357 Ga0075435_100374117
358 Ga0105240_10202179
359 Ga0105240_10314980
360 Ga0105240_10517631
361 Ga0105240_10609811
362 Ga0111539_10322985
363 Ga0111539_10511324
364 Ga0105245_10075765
365 Ga0105247_10011469
366 Ga0105241_10017794
367 Ga0105248_10069678
368 Ga0105248_10169026
369 Ga0105248_10493643
370 Ga0105237_10163015
371 Ga0105237_10251470
372 Ga0105239_10049378
373 Ga0105239_10579642
374 Ga0105239_10673905
375 Ga0105246_10021184
376 Ga0157369_10003311
377 Ga0157369_10021390
378 Ga0157369_10031769
379 Ga0157369_10973214
380 Ga0157374_10018660
381 Ga0157378_10808667
382 Ga0163162_10090888
383 Ga0163162_10241001
384 Ga0163162_10937214
385 Ga0157372_10052498
386 Ga0157372_10152467
387 Ga0163163_10057556
388 Ga0157379_10602779
389 Ga0157376_10061049
390 Ga0157376_10074118
391 Ga0197907_10315196
392 Ga0206353_10968020
393 Ga0224712_10013481
394 Ga0209455_1004916
395 Ga0207713_1021008
396 Ga0207692_10030854
397 Ga0207710_10006419
398 Ga0207685_10007286
399 Ga0207685_10069504
400 Ga0207699_10005454
401 Ga0207654_10375992
402 Ga0207707_10003577
403 Ga0207707_10013335
404 Ga0207707_10026857
405 Ga0207695_10272668
406 Ga0207671_10048521
407 Ga0207671_10078178
408 Ga0207671_10299013
409 Ga0207671_10309478
410 Ga0207693_10019742
411 Ga0207663_10427749
412 Ga0207649_10094802
413 Ga0207652_10214867
414 Ga0207694_10034710
415 Ga0207694_10129150
416 Ga0207650_10312886
417 Ga0207687_10003408
418 Ga0207700_10013168
419 Ga0207700_10252357
420 Ga0207664_10052693
421 Ga0207664_10081946
422 Ga0207709_10623830
423 Ga0207665_10004283
424 Ga0207665_10007965
425 Ga0207711_10171355
426 Ga0207661_10019810
427 Ga0207661_10248207
428 Ga0207661_10343532
429 Ga0207667_10141593
430 Ga0207658_10050905
431 Ga0207676_10004875
432 Ga0207674_10439912
433 Ga0207683_10072945
434 Ga0207698_10055495
435 Ga0209813_10011016
436 Ga0268266_10162253
437 Ga0265337_1003724
438 Ga0265332_10001295
439 Ga0265329_10071719
440 Ga0265340_10007359
441 Ga0265339_10001201
442 Ga0265339_10039155
443 Ga0265331_10090643
444 Ga0265316_10248976
445 Ga0265313_10008974
446 Ga0307508_10000020
447 Ga0265314_10062047
448 Ga0265314_10206388
449 Ga0265342_10000137
450 Ga0316215_1007212
451 Ga0373934_0094266
452 Ga0373944_0059017
453 Ga0373923_0011271
454 Ga0373945_0003195
455 Ga0373953_0028718
456 Ga0373943_0014690
457 Ga0373943_0075446
458 Ga0373946_0003109
459 Ga0373962_0075194
460 Ga0373931_0048659
461 Ga0373927_0025944
462 Ga0373927_0139270
463 Ga0373927_0369572
464 Ga0373933_0061987
465 Ga0373947_0429995
466 Ga0373937_0006601
467 Ga0373937_0041702
468 Ga0373937_0509441
469 Ga0316582_0428195
470 Ga0316584_0219073
471 Ga0373925_0078027
472 Ga0373925_0295234
473 Ga0395899_0317605
474 Ga0395900_0014536
475 Ga0395898_0010480
476 Ga0395905_0163877
477 Ga0395901_0346066
478 Ga0450923_070841
479 Ga0466966_0149744
480 Ga0466963_0166454
481 Ga0466959_0143166
482 Ga0466958_0435822
483 Ga0466967_0380771
484 Ga0495603_0082733
485 Ga0495651_0074512
486 Ga0495580_0133185
487 Ga0495582_0002319
488 Ga0495582_0013792
489 Ga0495639_0009925
490 Ga0495662_0071093
491 Ga0495610_0128441
492 Ga0495618_0034058
493 Ga0495628_0443210
494 Ga0495630_0042152
495 Ga0495665_0076290
496 Ga0495640_0268887
497 Ga0495645_0028183
498 Ga0495656_0135964
499 Ga0495635_0090738
500 Ga0495588_0028345
501 Ga0495623_0300447
502 Ga0495646_0032901
503 Ga0495647_0026252
504 Ga0495658_0004850
505 Ga0495613_0071710
506 Ga0495624_0036676
507 Ga0495624_0090983
508 Ga0495581_0019047
509 Ga0495674_0086625
510 Ga0495676_0115183
511 Ga0495680_0506208
512 Ga0496100_0081582
513 Ga0496101_0206494
514 Ga0496101_0400249
515 Ga0496102_0027609
516 Ga0496102_0058383
517 Ga0496102_0382169
518 Ga0496102_0688684
519 Ga0496103_0006448
520 Ga0496103_0339404
521 Ga0496104_0006159
522 Ga0496104_0092885
523 Ga0496105_0380341
524 Ga0496106_0014405
525 Ga0496106_0048245
526 Ga0496106_0075653
527 Ga0496107_0003405
528 Ga0496107_0019604
529 Ga0496108_0002446
530 Ga0496108_0284273
531 Ga0496109_0007428
532 Ga0496109_0007673
533 Ga0496110_0072901
534 Ga0496110_0109361
535 Ga0496110_0303110
536 Ga0496111_0016804
537 Ga0496112_0003189
538 Ga0496112_0004436
539 Ga0496112_0023998
540 Ga0496113_0011936
541 Ga0496113_0054301
542 Ga0496114_0007779
543 Ga0496114_0351108
544 Ga0496115_0034701
545 Ga0496115_0035263
546 Ga0496115_0181121
547 Ga0496121_0005105
548 Ga0496121_0204167
549 Ga0496124_0365949
550 Ga0496126_0245268
551 Ga0501032_0022510
552 Ga0501033_0042036
553 Ga0501033_0103370
554 Ga0501034_0006506
555 Ga0501034_0552156
556 Ga0501036_0004587
557 Ga0501036_0222153
558 Ga0501037_0005441
559 Ga0501038_0033518
560 Ga0501039_0019960
561 Ga0501042_0218361
562 Ga0501043_0029875
563 Ga0501046_0003333
564 Ga0501046_0375771
565 Ga0501047_0018240
566 Ga0501047_0084100
567 Ga0501048_0011874
568 Ga0501067_0003337
569 Ga0501068_0015507
570 Ga0501069_0002888
571 Ga0501070_0016447
572 Ga0501070_0087516
573 Ga0501071_0027234
574 Ga0501073_0010563
575 Ga0501073_0045554
576 Ga0501074_0007244
577 Ga0501079_0120058
578 Ga0501080_0007981
579 Ga0501080_0053191
580 Ga0501083_0032128
581 Ga0501035_0019165
582 Ga0501044_0057110
583 Ga0501044_0113881
584 Ga0501045_0058374
585 nmdc:mga00v17_2856_c1
586 nmdc:mga0yw44_490107_c1
587 nmdc:mga0k408_140363_c1
588 nmdc:mga06z11_200904_c1
589 nmdc:mga06z11_282795_c1
590 nmdc:mga04h51_12179_c1
591 nmdc:mga07m45_50883_c1
592 nmdc:mga07m45_5160_c1
593 nmdc:mga0qj67_90_c1
594 nmdc:mga06r32_390346_c1
595 nmdc:mga0n895_165808_c1
596 nmdc:mga0n895_506761_c1
597 nmdc:mga0sz30_72576_c1
598 Ga0495601_0220581
599 Ga0495612_0046322
600 Ga0495619_0114009
601 Ga0500595_001592
602 Ga0500568_0123287
603 Ga0500616_0077373
604 Ga0500627_0050994
605 Ga0501084_0011645
606 Ga0501082_0042626
607 2524539915
608 2757570843
609 2837653728
610 2903772646
611 2937847274
612 8006942058
613 8006981798
614 8056694209

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21948

LplA-B_cat

Lipoyl protein ligase A/B catalytic domain

31

226

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qhv-assembly1.cif.gz_A structural basis of octanoic acid recognition by lipoate-protein ligase b 0.8709 21 234
2qhv-assembly1.cif.gz_A structural basis of octanoic acid recognition by lipoate-protein ligase b 0.867 21 234
1w66-assembly1.cif.gz_A structure of a lipoate-protein ligase b from mycobacterium tuberculosis 0.8392 16 233
1w66-assembly1.cif.gz_A structure of a lipoate-protein ligase b from mycobacterium tuberculosis 0.8319 16 233
4tvw-assembly2.cif.gz_B resorufin ligase with bound resorufin-amp analog 0.743 19 234
ID Description Score Start End Superfamily
1w66A01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9291 17 224 3.30.930.10
af_P60720_2_203_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9087 21 229 3.30.930.10
1w66A01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8864 17 224 3.30.930.10
af_P60720_2_203_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8788 21 229 3.30.930.10
2qhuA01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8725 21 230 3.30.930.10
ID Description Score Start End GO Terms
AF-A4YT30-F1-model_v4 Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase) 0.9799 1 233 GO:0005737
GO:0033819
AF-A0A258IJ46-F1-model_v4 Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase) 0.9761 18 233 GO:0005737
GO:0016874
GO:0033819
AF-A0A833FZI0-F1-model_v4 Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase) 0.9741 20 233 GO:0005737
GO:0033819
AF-A0A327K001-F1-model_v4 Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase) 0.9735 15 233 GO:0005737
GO:0016874
GO:0033819
AF-A0A0S3PWQ3-F1-model_v4 Octanoyltransferase (EC 2.3.1.181) (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase) 0.9718 5 233 GO:0005737
GO:0033819

Map