F398951

General Info

Members Datasets Scaffolds Average Seq Length
306 204 220 358

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2995726249|2995729316
Length 389
Sequence LLAGGGTAGHVNPLLAVADRLRERSAADGVVVLGTAEGLEARLVPARGYALETIPKAPFPRKPDLRALRFPARYRAAVRRARGLIRERGIDVVIGFGGYAAAPGYAAARREGVPYVVHEANVRPGLANARAAGRAAAVGVAFPGTPLRRGEVVGMPLRAELARLDRPVLRAEAAAHFGLDADRPVLLVFGGSTGARRINHALAAAWPGVLAAGWQVLHATGGDKAGEVDPEGAPGRAVVPYVDRMDLAYALADLVVCRSGAATVAELSALGIPAVYVPYAVGNGEQARNAEPVVRAGGALRIDDADLTADRLLDRIAPLLRDAEARARMGGAAGALGARDGSDRLIALADRALASASRTGGGAGPGTAGRPDGTGGRWRRGRSAAGSKA

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
3 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
4 2643221546 Microbacterium sp. Root53 Isolate Unclassified
5 2643221549 Agromyces sp. Root1464 Isolate Unclassified
6 2643221553 Microbacterium sp. Root553 Isolate Unclassified
7 2643221566 Microbacterium sp. Root166 Isolate Unclassified
8 2643221572 Leifsonia sp. Root60 Isolate Unclassified
9 2643221575 Microbacterium sp. Root61 Isolate Unclassified
10 2643221597 Microbacterium sp. Root180 Isolate Unclassified
11 2643221613 Oerskovia sp. Root22 Isolate Unclassified
12 2643221616 Leifsonia sp. Root227 Isolate Unclassified
13 2643221619 Agromyces sp. Root81 Isolate Unclassified
14 2643221630 Microbacterium sp. Root322 Isolate Unclassified
15 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
16 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
17 2643221649 Leifsonia sp. Root4 Isolate Unclassified
18 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
19 2643221721 Oerskovia sp. Root918 Isolate Unclassified
20 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
21 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
22 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
23 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
24 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
25 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
26 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
27 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
28 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
29 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
30 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
31 2773857759 Microbacterium sp. 1294 Isolate Unclassified
32 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
33 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
34 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
35 2808606394 Promicromonospora sp. C35 Isolate Unclassified
36 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
37 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
38 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
39 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
40 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
41 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
42 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
43 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
44 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
45 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
46 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
47 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
48 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
49 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
50 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
51 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
52 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
53 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
54 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
55 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
56 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
57 2919069694 Microbacterium sp. 1154 Isolate Unclassified
58 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
59 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
60 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
61 2928153084 Leifsonia sp. 563 Isolate Unclassified
62 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
63 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
64 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
65 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
66 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
67 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
68 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
69 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
70 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
71 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
72 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
73 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
74 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
75 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
76 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
77 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
78 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
79 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
80 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
81 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
82 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
83 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
84 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
85 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
86 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
87 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
88 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
89 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
90 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
91 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
92 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
93 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
94 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
95 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
96 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
97 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
98 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
99 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
100 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
101 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
102 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
103 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
104 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
105 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
106 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
107 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
113 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
114 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
115 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
118 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
126 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
127 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
128 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
129 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
130 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
133 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
134 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
135 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
136 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
137 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
138 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
139 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
140 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
141 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
142 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
143 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
144 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
159 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
160 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
161 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
162 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
163 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
164 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
180 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
181 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
182 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
183 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
184 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
185 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
186 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
187 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
190 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
191 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
192 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
193 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
194 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
195 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
196 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
197 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
198 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
199 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
200 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
201 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
202 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
203 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
204 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.92
Metatranscriptomes 0.98
Isolates 28.1

Biome Distribution

Category Percentage (%)
Aerial Root 0.65
Bulb 0
Endosphere 10.46
Nodule 0
Rhizoplane 3.92
Rhizosphere 50.98
Stem 0
Stem Tuber 0.33
Unclassified 33.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10002546 3300002067 Bacteria 6302
2 JGI25154J39366_1001360 3300002738 Bacteria 8912
3 JGI25165J46597_1000004 3300003214 Bacteria 667510
4 rootH1_10067106 3300003316 Bacteria 1512
5 Ga0006562J51391_1013230 3300003578 Bacteria 8250
6 Ga0006562J51391_1013231 3300003578 Bacteria 5540
7 Ga0006562J51391_1120221 3300003578 Bacteria 6195
8 Ga0055539_1000005 3300003752 Bacteria 609598
9 Ga0055533_1000001 3300003756 Bacteria 1863437
10 Ga0055525_1000297 3300003759 Bacteria 42949
11 Ga0055527_1000001 3300003760 Bacteria 850044
12 Ga0055529_1000019 3300003763 Bacteria 332786
13 Ga0055541_1004739 3300003841 Bacteria 2443
14 Ga0070658_10201133 3300005327 Bacteria 1681
15 Ga0070682_100104472 3300005337 Bacteria 1876
16 Ga0070668_100049787 3300005347 Bacteria 3224
17 Ga0070675_100157531 3300005354 Bacteria 1950
18 Ga0068856_100149248 3300005614 Bacteria 2346
19 Ga0068862_100266181 3300005844 Bacteria 1566
20 Ga0075365_10017128 3300006038 Bacteria 4425
21 Ga0075363_100189270 3300006048 Bacteria 1173
22 Ga0075367_10006531 3300006178 Bacteria 5899
23 Ga0105244_10046547 3300009036 Bacteria 2228
24 Ga0105244_10046549 3300009036 Bacteria 2228
25 Ga0105243_10040469 3300009148 Bacteria 3640
26 Ga0105243_10067406 3300009148 Bacteria 2881
27 Ga0105237_10035171 3300009545 Bacteria 5070
28 Ga0157369_10005678 3300013105 Bacteria 14497
29 Ga0171462_1003 3300013250 Bacteria 853796
30 Ga0157372_10085757 3300013307 Bacteria 3572
31 Ga0157375_10218969 3300013308 Bacteria 2062
32 Ga0209566_100240 3300025225 Bacteria 52739
33 Ga0209674_100001 3300025226 Bacteria 4013750
34 Ga0209672_100006 3300025228 Bacteria 1004497
35 Ga0209147_101283 3300025229 Bacteria 9777
36 Ga0209563_100001 3300025230 Bacteria 4013775
37 Ga0209563_101059 3300025230 Bacteria 7955
38 Ga0207427_100010 3300025231 Bacteria 648610
39 Ga0209437_100216 3300025233 Bacteria 106353
40 Ga0209646_1000248 3300025246 Bacteria 54666
41 Ga0209677_100001 3300025253 Bacteria 4013787
42 Ga0209148_1000015 3300025254 Bacteria 850103
43 Ga0209233_1000001 3300025261 Bacteria 2992747
44 Ga0209455_1000013 3300025272 Bacteria 850103
45 Ga0209455_1002674 3300025272 Bacteria 6710
46 Ga0207655_1006960 3300025728 Bacteria 7413
47 Ga0207655_1030881 3300025728 Bacteria 2481
48 Ga0207643_10034770 3300025908 Bacteria 2824
49 Ga0207659_10205757 3300025926 Bacteria 1575
50 Ga0207709_10009669 3300025935 Bacteria 5312
51 Ga0207709_10027013 3300025935 Bacteria 3302
52 Ga0207675_100083453 3300026118 Bacteria 2997
53 Ga0207683_10288765 3300026121 Bacteria 1500
54 Ga0314311_1007561 3300030733 Bacteria 2154
55 Ga0307514_10004848 3300031649 Bacteria 12239
56 Ga0307406_10000034 3300031901 Bacteria 83739
57 Ga0307406_10000751 3300031901 Bacteria 18203
58 Ga0307406_10055254 3300031901 Bacteria 2537
59 Ga0307414_10119817 3300032004 Bacteria 2021
60 Ga0395900_0001424 3300037418 Bacteria 28552
61 Ga0395900_0009278 3300037418 Bacteria 10089
62 Ga0395898_0000015 3300037466 Bacteria 439819
63 Ga0395898_0103162 3300037466 Bacteria 2737
64 Ga0395901_0294014 3300038443 Bacteria 1685
65 Ga0451841_1431726 3300041498 Bacteria 1287
66 Ga0466972_0013187 3300044658 Bacteria 4150
67 Ga0466972_0019260 3300044658 Bacteria 3413
68 Ga0466965_0000015 3300044683 Bacteria 81629
69 Ga0466965_0013952 3300044683 Bacteria 3798
70 Ga0466965_0034930 3300044683 Bacteria 2461
71 Ga0466966_0059490 3300044684 Bacteria 2413
72 Ga0466961_0026463 3300044693 Bacteria 3729
73 Ga0466970_0000004 3300044765 Bacteria 108620
74 Ga0466970_0002924 3300044765 Bacteria 8274
75 Ga0466970_0010739 3300044765 Bacteria 4655
76 Ga0466970_0048545 3300044765 Bacteria 2263
77 Ga0466957_0055187 3300044842 Bacteria 2428
78 Ga0466960_0003386 3300044901 Bacteria 6124
79 Ga0466960_0012062 3300044901 Bacteria 3637
80 Ga0495627_003540 3300046453 Bacteria 6827
81 Ga0495590_0000279 3300046457 Bacteria 27525
82 Ga0495650_0049920 3300046471 Bacteria 1734
83 Ga0495645_0013837 3300046543 Bacteria 5717
84 Ga0495672_0010258 3300047320 Bacteria 6692
85 Ga0495686_0203247 3300047472 Bacteria 1136
86 Ga0496103_0025778 3300048906 Bacteria 3556
87 Ga0496104_0161630 3300048907 Bacteria 2148
88 Ga0496106_0186782 3300048909 Bacteria 1647
89 Ga0496107_0120827 3300048910 Bacteria 1930
90 Ga0496110_0036278 3300048913 Bacteria 4281
91 Ga0496111_0006379 3300048914 Bacteria 7655
92 Ga0496111_0211465 3300048914 Bacteria 1440
93 Ga0496112_0354409 3300048915 Bacteria 1410
94 Ga0496113_0056431 3300048916 Bacteria 2949
95 Ga0496114_0118255 3300048917 Bacteria 2277
96 Ga0496114_0185522 3300048917 Bacteria 1818
97 Ga0496115_0070006 3300048918 Bacteria 2843
98 Ga0496117_0000232 3300048920 Bacteria 105479
99 Ga0496117_0001383 3300048920 Bacteria 35268
100 Ga0496117_0008221 3300048920 Bacteria 9947
101 Ga0496117_0008243 3300048920 Bacteria 9932
102 Ga0496117_0016047 3300048920 Bacteria 6343
103 Ga0496117_0070655 3300048920 Bacteria 2343
104 Ga0496117_0140903 3300048920 Bacteria 1444
105 Ga0496117_0177730 3300048920 Bacteria 1227
106 Ga0496118_0086065 3300048921 Bacteria 2185
107 Ga0496118_0104891 3300048921 Bacteria 1896
108 Ga0496119_0000341 3300048922 Bacteria 65282
109 Ga0496119_0001189 3300048922 Bacteria 32563
110 Ga0496119_0013612 3300048922 Bacteria 6459
111 Ga0496119_0055686 3300048922 Bacteria 2401
112 Ga0496120_0001174 3300048923 Bacteria 33434
113 Ga0496120_0001282 3300048923 Bacteria 31373
114 Ga0496120_0016874 3300048923 Bacteria 4754
115 Ga0496121_0036887 3300048924 Bacteria 4350
116 Ga0496122_0000030 3300048925 Bacteria 331586
117 Ga0496122_0002594 3300048925 Bacteria 25336
118 Ga0496122_0003267 3300048925 Bacteria 21504
119 Ga0496122_0009200 3300048925 Bacteria 10462
120 Ga0496122_0019231 3300048925 Bacteria 6250
121 Ga0496122_0034873 3300048925 Bacteria 4108
122 Ga0496122_0126802 3300048925 Bacteria 1632
123 Ga0496123_0000024 3300048926 Bacteria 331587
124 Ga0496123_0000051 3300048926 Bacteria 237095
125 Ga0496123_0001799 3300048926 Bacteria 28218
126 Ga0496123_0048812 3300048926 Bacteria 2844
127 Ga0496124_0001836 3300048927 Bacteria 29326
128 Ga0496124_0015886 3300048927 Bacteria 7190
129 Ga0496124_0019623 3300048927 Bacteria 6282
130 Ga0496124_0088033 3300048927 Bacteria 2539
131 Ga0496125_0000097 3300048928 Bacteria 204607
132 Ga0496125_0004280 3300048928 Bacteria 16602
133 Ga0496125_0013039 3300048928 Bacteria 8201
134 Ga0496125_0045381 3300048928 Bacteria 3699
135 Ga0496125_0058120 3300048928 Bacteria 3126
136 Ga0496125_0239420 3300048928 Bacteria 1153
137 Ga0496126_0001194 3300048929 Bacteria 42334
138 Ga0496126_0003946 3300048929 Bacteria 18152
139 Ga0496126_0008066 3300048929 Bacteria 11409
140 Ga0496126_0028744 3300048929 Bacteria 5292
141 Ga0496126_0328983 3300048929 Bacteria 1254
142 Ga0501031_0006867 3300049568 Bacteria 7428
143 Ga0501031_0045799 3300049568 Bacteria 2854
144 Ga0501031_0153408 3300049568 Bacteria 1505
145 Ga0501032_0006073 3300049569 Bacteria 8897
146 Ga0501033_0010866 3300049570 Bacteria 6979
147 Ga0501033_0014892 3300049570 Bacteria 5903
148 Ga0501033_0060697 3300049570 Bacteria 2789
149 Ga0501033_0116368 3300049570 Bacteria 1942
150 Ga0501034_0000227 3300049571 Bacteria 106244
151 Ga0501034_0007115 3300049571 Bacteria 11933
152 Ga0501034_0023550 3300049571 Bacteria 6274
153 Ga0501034_0045794 3300049571 Bacteria 4419
154 Ga0501034_0060567 3300049571 Bacteria 3802
155 Ga0501036_0032328 3300049572 Bacteria 4420
156 Ga0501037_0000671 3300049573 Bacteria 26204
157 Ga0501037_0037851 3300049573 Bacteria 3556
158 Ga0501037_0057806 3300049573 Bacteria 2831
159 Ga0501037_0113841 3300049573 Bacteria 1947
160 Ga0501038_0000236 3300049574 Bacteria 46834
161 Ga0501038_0001936 3300049574 Bacteria 19105
162 Ga0501038_0022915 3300049574 Bacteria 5590
163 Ga0501038_0225517 3300049574 Bacteria 1493
164 Ga0501039_0283856 3300049575 Bacteria 1301
165 Ga0501042_0006927 3300049578 Bacteria 7396
166 Ga0501042_0018856 3300049578 Bacteria 4782
167 Ga0501043_0074664 3300049579 Bacteria 2663
168 Ga0501043_0185544 3300049579 Bacteria 1619
169 Ga0501043_0319623 3300049579 Bacteria 1184
170 Ga0501046_0005548 3300049580 Bacteria 11270
171 Ga0501046_0017339 3300049580 Bacteria 6013
172 Ga0501046_0028489 3300049580 Bacteria 4547
173 Ga0501046_0061985 3300049580 Bacteria 2923
174 Ga0501047_0007216 3300049581 Bacteria 10447
175 Ga0501047_0012738 3300049581 Bacteria 7967
176 Ga0501047_0040937 3300049581 Bacteria 4480
177 Ga0501047_0046954 3300049581 Bacteria 4173
178 Ga0501047_0126613 3300049581 Bacteria 2435
179 Ga0501047_0190519 3300049581 Bacteria 1914
180 Ga0501048_0011854 3300049582 Bacteria 6499
181 Ga0501048_0018628 3300049582 Bacteria 5104
182 Ga0501067_0024458 3300049583 Bacteria 3350
183 Ga0501068_0031238 3300049584 Bacteria 3163
184 Ga0501070_0000167 3300049586 Bacteria 60680
185 Ga0501070_0003210 3300049586 Bacteria 14219
186 Ga0501070_0037341 3300049586 Bacteria 4056
187 Ga0501070_0056087 3300049586 Bacteria 3266
188 Ga0501072_0173800 3300049588 Bacteria 1719
189 Ga0501073_0000226 3300049589 Bacteria 36967
190 Ga0501073_0060665 3300049589 Bacteria 2639
191 Ga0501073_0068680 3300049589 Bacteria 2470
192 Ga0501074_0021639 3300049590 Bacteria 4669
193 Ga0501080_0094172 3300049742 Bacteria 2782
194 Ga0501080_0140898 3300049742 Bacteria 2229
195 Ga0501080_0344535 3300049742 Bacteria 1346
196 Ga0501083_0000027 3300049744 Bacteria 117605
197 Ga0501083_0000527 3300049744 Bacteria 24400
198 Ga0501083_0006479 3300049744 Bacteria 8304
199 Ga0501035_0007336 3300049822 Bacteria 10305
200 Ga0501035_0035966 3300049822 Bacteria 4492
201 Ga0501035_0054023 3300049822 Bacteria 3590
202 Ga0501035_0058136 3300049822 Bacteria 3447
203 Ga0501035_0369520 3300049822 Bacteria 1197
204 Ga0501044_0002197 3300049823 Bacteria 22378
205 Ga0501044_0006649 3300049823 Bacteria 12748
206 Ga0501044_0012751 3300049823 Bacteria 9101
207 Ga0501044_0188583 3300049823 Bacteria 2026
208 Ga0501045_0005765 3300049824 Bacteria 8568
209 nmdc:mga0yw44_218377_c1 3300050492 Bacteria 1263
210 Ga0500635_0000028 3300053080 Bacteria 104398
211 Ga0500559_0000102 3300053136 Bacteria 66427
212 Ga0500568_0000014 3300053139 Bacteria 223550
213 Ga0500568_0001189 3300053139 Bacteria 17400
214 Ga0500573_0000059 3300053140 Bacteria 71066
215 Ga0500573_0011605 3300053140 Bacteria 4935
216 Ga0500616_0001498 3300053153 Bacteria 22063
217 Ga0500645_007225 3300053730 Bacteria 3888
218 Ga0501084_0166379 3300054114 Bacteria 1861
219 Ga0501082_0001508 3300060353 Bacteria 20522
220 Ga0501082_0101573 3300060353 Bacteria 2488

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300060353 Ga0501082_0001508 Ga0501082_0001508_9535_10695 291
2 3300003316 rootH1_10067106 rootH1_100671062 299
3 3300049579 Ga0501043_0074664 Ga0501043_0074664_1681_2646 307
4 3300030733 Ga0314311_1007561 Ga0314311_10075612 320
5 3300006038 Ga0075365_10017128 Ga0075365_100171283 325
6 3300006048 Ga0075363_100189270 Ga0075363_1001892701 325
7 3300006178 Ga0075367_10006531 Ga0075367_100065312 325
8 3300050492 nmdc:mga0yw44_218377_c1 nmdc:mga0yw44_218377_c1_55_1134 325
9 iso_pu_bacteria 2839986021 2839986941 333
10 3300049570 Ga0501033_0116368 Ga0501033_0116368_567_1658 339
11 3300049579 Ga0501043_0185544 Ga0501043_0185544_349_1440 339
12 3300049580 Ga0501046_0028489 Ga0501046_0028489_303_1394 339
13 3300049581 Ga0501047_0190519 Ga0501047_0190519_273_1364 339
14 3300049822 Ga0501035_0369520 Ga0501035_0369520_94_1185 339
15 3300049823 Ga0501044_0188583 Ga0501044_0188583_574_1665 339
16 3300049742 Ga0501080_0344535 Ga0501080_0344535_11_1051 341
17 3300053080 Ga0500635_0000028 Ga0500635_0000028_50403_51455 341
18 3300003578 Ga0006562J51391_1013230 Ga0006562J51391_10132308 342
19 3300003578 Ga0006562J51391_1013231 Ga0006562J51391_10132315 342
20 3300049573 Ga0501037_0057806 Ga0501037_0057806_1535_2695 342
21 3300049574 Ga0501038_0000236 Ga0501038_0000236_42403_43563 342
22 3300049580 Ga0501046_0017339 Ga0501046_0017339_4218_5378 342
23 3300049581 Ga0501047_0007216 Ga0501047_0007216_3662_4822 342
24 3300049583 Ga0501067_0024458 Ga0501067_0024458_2163_3323 342
25 iso_pu_bacteria 2977228692 2977231000 343
26 3300048928 Ga0496125_0000097 Ga0496125_0000097_104719_105816 344
27 3300049589 Ga0501073_0000226 Ga0501073_0000226_6911_7993 346
28 3300049742 Ga0501080_0094172 Ga0501080_0094172_436_1518 346
29 3300049744 Ga0501083_0000527 Ga0501083_0000527_4843_6003 346
30 3300049822 Ga0501035_0035966 Ga0501035_0035966_1217_2377 346
31 3300049823 Ga0501044_0006649 Ga0501044_0006649_4596_5756 346
32 3300009036 Ga0105244_10046547 Ga0105244_100465472 347
33 3300009148 Ga0105243_10067406 Ga0105243_100674062 347
34 3300025728 Ga0207655_1006960 Ga0207655_10069606 347
35 3300025935 Ga0207709_10009669 Ga0207709_100096693 347
36 3300049571 Ga0501034_0060567 Ga0501034_0060567_1160_2260 348
37 3300049573 Ga0501037_0113841 Ga0501037_0113841_799_1899 348
38 3300044658 Ga0466972_0019260 Ga0466972_0019260_1968_3074 349
39 3300044683 Ga0466965_0013952 Ga0466965_0013952_987_2093 349
40 3300048917 Ga0496114_0185522 Ga0496114_0185522_580_1656 349
41 3300048929 Ga0496126_0008066 Ga0496126_0008066_7641_8726 349
42 3300049568 Ga0501031_0153408 Ga0501031_0153408_181_1272 349
43 3300049570 Ga0501033_0010866 Ga0501033_0010866_5352_6443 349
44 3300049571 Ga0501034_0045794 Ga0501034_0045794_459_1550 349
45 3300049572 Ga0501036_0032328 Ga0501036_0032328_48_1139 349
46 3300049573 Ga0501037_0037851 Ga0501037_0037851_2297_3388 349
47 3300049574 Ga0501038_0225517 Ga0501038_0225517_234_1325 349
48 3300049578 Ga0501042_0018856 Ga0501042_0018856_3155_4246 349
49 3300049582 Ga0501048_0011854 Ga0501048_0011854_2999_4090 349
50 3300049586 Ga0501070_0037341 Ga0501070_0037341_2645_3736 349
51 3300049589 Ga0501073_0060665 Ga0501073_0060665_47_1138 349
52 3300049590 Ga0501074_0021639 Ga0501074_0021639_3281_4372 349
53 3300049742 Ga0501080_0140898 Ga0501080_0140898_573_1664 349
54 3300049824 Ga0501045_0005765 Ga0501045_0005765_6903_7994 349
55 3300054114 Ga0501084_0166379 Ga0501084_0166379_730_1821 349
56 iso_pu_bacteria 2643221635 2644199421 349
57 3300044683 Ga0466965_0000015 Ga0466965_0000015_69232_70317 350
58 iso_pu_bacteria 2852677369 2852679511 350
59 iso_pu_bacteria 2946033335 2946033438 350
60 3300048920 Ga0496117_0001383 Ga0496117_0001383_24981_26048 351
61 3300048921 Ga0496118_0104891 Ga0496118_0104891_611_1678 351
62 3300048925 Ga0496122_0126802 Ga0496122_0126802_421_1488 351
63 3300048929 Ga0496126_0003946 Ga0496126_0003946_8406_9473 351
64 iso_pu_bacteria 2585428094 2587862522 351
65 iso_pu_bacteria 2585428157 2588108188 351
66 iso_pu_bacteria 2643221542 2643733342 351
67 iso_pu_bacteria 2643221546 2643753565 351
68 iso_pu_bacteria 2643221549 2643767415 351
69 iso_pu_bacteria 2643221553 2643786169 351
70 iso_pu_bacteria 2643221566 2643848056 351
71 iso_pu_bacteria 2643221572 2643874996 351
72 iso_pu_bacteria 2643221575 2643885084 351
73 iso_pu_bacteria 2643221597 2643995591 351
74 iso_pu_bacteria 2643221616 2644097083 351
75 iso_pu_bacteria 2643221619 2644111493 351
76 iso_pu_bacteria 2643221630 2644169916 351
77 iso_pu_bacteria 2643221632 2644183661 351
78 iso_pu_bacteria 2643221649 2644279260 351
79 iso_pu_bacteria 2643221669 2644382052 351
80 iso_pu_bacteria 2643221724 2644680562 351
81 iso_pu_bacteria 2721755702 2723642395 351
82 iso_pu_bacteria 2728369380 2730230022 351
83 iso_pu_bacteria 2747842429 2747954648 351
84 iso_pu_bacteria 2757320536 2758227231 351
85 iso_pu_bacteria 2773857758 2774381634 351
86 iso_pu_bacteria 2773857759 2774384733 351
87 iso_pu_bacteria 2773857763 2774399846 351
88 iso_pu_bacteria 2808606447 2809227134 351
89 iso_pu_bacteria 2821268502 2821269692 351
90 iso_pu_bacteria 2833709550 2833710640 351
91 iso_pu_bacteria 2844841374 2844842747 351
92 iso_pu_bacteria 2852632344 2852633484 351
93 iso_pu_bacteria 2852646457 2852648722 351
94 iso_pu_bacteria 2852663356 2852666905 351
95 iso_pu_bacteria 2857720070 2857720543 351
96 iso_pu_bacteria 2857723135 2857724226 351
97 iso_pu_bacteria 2857737099 2857739962 351
98 iso_pu_bacteria 2862993130 2862996459 351
99 iso_pu_bacteria 2870628048 2870630058 351
100 iso_pu_bacteria 2884763398 2884765725 351
101 iso_pu_bacteria 2895660088 2895661122 351
102 iso_pu_bacteria 2904509784 2904512710 351
103 iso_pu_bacteria 2906799679 2906800192 351
104 iso_pu_bacteria 2908678064 2908681292 351
105 iso_pu_bacteria 2919055335 2919058453 351
106 iso_pu_bacteria 2919069694 2919071456 351
107 iso_pu_bacteria 2919443155 2919445913 351
108 iso_pu_bacteria 2919523602 2919524836 351
109 iso_pu_bacteria 2928090899 2928092374 351
110 iso_pu_bacteria 2928153084 2928156253 351
111 iso_pu_bacteria 2935409751 2935412776 351
112 iso_pu_bacteria 2939660829 2939660936 351
113 iso_pu_bacteria 2945968032 2945968147 351
114 iso_pu_bacteria 2946041624 2946044646 351
115 iso_pu_bacteria 2946080515 2946080584 351
116 iso_pu_bacteria 2964326757 2964326841 351
117 iso_pu_bacteria 2974294766 2974297730 351
118 iso_pu_bacteria 2974324384 2974326036 351
119 iso_pu_bacteria 2977236895 2977239794 351
120 iso_pu_bacteria 2977251589 2977253684 351
121 iso_pu_bacteria 2977264416 2977266236 351
122 iso_pu_bacteria 2984542743 2984545933 351
123 iso_pu_bacteria 2984580707 2984580862 351
124 iso_pu_bacteria 2995726249 2995729316 351
125 iso_pu_bacteria 8004182704 8004184829 351
126 iso_pu_bacteria 8004212874 8004214397 351
127 iso_pu_bacteria 8045830549 8045830866 351
128 iso_pu_bacteria 8055037949 8055038707 351
129 3300044765 Ga0466970_0002924 Ga0466970_0002924_1445_2536 352
130 iso_pu_bacteria 2643221619 2644110636 352
131 3300049578 Ga0501042_0006927 Ga0501042_0006927_570_1634 353
132 3300049744 Ga0501083_0000027 Ga0501083_0000027_79753_80817 353
133 3300049822 Ga0501035_0058136 Ga0501035_0058136_697_1758 353
134 iso_pu_bacteria 2808606306 2808631459 353
135 iso_pu_bacteria 2808606368 2808885383 353
136 iso_pu_bacteria 2932431166 2932433602 353
137 3300037418 Ga0395900_0009278 Ga0395900_0009278_2287_3393 354
138 3300038443 Ga0395901_0294014 Ga0395901_0294014_480_1586 354
139 3300049570 Ga0501033_0014892 Ga0501033_0014892_2890_3987 354
140 3300049571 Ga0501034_0023550 Ga0501034_0023550_1293_2357 354
141 3300049574 Ga0501038_0001936 Ga0501038_0001936_10991_12064 354
142 3300049580 Ga0501046_0061985 Ga0501046_0061985_316_1380 354
143 3300049581 Ga0501047_0012738 Ga0501047_0012738_5004_6101 354
144 3300049581 Ga0501047_0046954 Ga0501047_0046954_2300_3364 354
145 3300049581 Ga0501047_0126613 Ga0501047_0126613_1226_2350 354
146 3300049744 Ga0501083_0006479 Ga0501083_0006479_553_1638 354
147 3300053153 Ga0500616_0001498 Ga0500616_0001498_1681_2781 354
148 iso_pu_bacteria 2643221613 2644081716 354
149 iso_pu_bacteria 2643221721 2644665241 354
150 iso_pu_bacteria 2739367654 2739609138 354
151 iso_pu_bacteria 2808606394 2809027475 354
152 iso_pu_bacteria 2935890801 2935891405 354
153 3300002067 JGI24735J21928_10002546 JGI24735J21928_100025464 355
154 3300002738 JGI25154J39366_1001360 JGI25154J39366_10013607 355
155 3300003214 JGI25165J46597_1000004 JGI25165J46597_1000004415 355
156 3300003578 Ga0006562J51391_1120221 Ga0006562J51391_11202215 355
157 3300003752 Ga0055539_1000005 Ga0055539_10000057 355
158 3300003756 Ga0055533_1000001 Ga0055533_10000011076 355
159 3300003759 Ga0055525_1000297 Ga0055525_100029729 355
160 3300003760 Ga0055527_1000001 Ga0055527_1000001561 355
161 3300003763 Ga0055529_1000019 Ga0055529_100001967 355
162 3300003841 Ga0055541_1004739 Ga0055541_10047392 355
163 3300005327 Ga0070658_10201133 Ga0070658_102011332 355
164 3300005337 Ga0070682_100104472 Ga0070682_1001044722 355
165 3300005347 Ga0070668_100049787 Ga0070668_1000497872 355
166 3300005354 Ga0070675_100157531 Ga0070675_1001575311 355
167 3300005614 Ga0068856_100149248 Ga0068856_1001492482 355
168 3300005844 Ga0068862_100266181 Ga0068862_1002661812 355
169 3300009036 Ga0105244_10046549 Ga0105244_100465492 355
170 3300009148 Ga0105243_10040469 Ga0105243_100404692 355
171 3300009545 Ga0105237_10035171 Ga0105237_100351714 355
172 3300013105 Ga0157369_10005678 Ga0157369_100056785 355
173 3300013250 Ga0171462_1003 Ga0171462_1003714 355
174 3300013307 Ga0157372_10085757 Ga0157372_100857572 355
175 3300013308 Ga0157375_10218969 Ga0157375_102189691 355
176 3300025225 Ga0209566_100240 Ga0209566_10024035 355
177 3300025226 Ga0209674_100001 Ga0209674_1000011076 355
178 3300025228 Ga0209672_100006 Ga0209672_100006414 355
179 3300025229 Ga0209147_101283 Ga0209147_1012837 355
180 3300025230 Ga0209563_100001 Ga0209563_1000011076 355
181 3300025230 Ga0209563_101059 Ga0209563_1010597 355
182 3300025231 Ga0207427_100010 Ga0207427_100010166 355
183 3300025233 Ga0209437_100216 Ga0209437_10021640 355
184 3300025246 Ga0209646_1000248 Ga0209646_100024840 355
185 3300025253 Ga0209677_100001 Ga0209677_1000011076 355
186 3300025254 Ga0209148_1000015 Ga0209148_1000015258 355
187 3300025261 Ga0209233_1000001 Ga0209233_10000011783 355
188 3300025272 Ga0209455_1000013 Ga0209455_1000013258 355
189 3300025272 Ga0209455_1002674 Ga0209455_10026743 355
190 3300025728 Ga0207655_1030881 Ga0207655_10308812 355
191 3300025908 Ga0207643_10034770 Ga0207643_100347702 355
192 3300025926 Ga0207659_10205757 Ga0207659_102057572 355
193 3300025935 Ga0207709_10027013 Ga0207709_100270133 355
194 3300026118 Ga0207675_100083453 Ga0207675_1000834532 355
195 3300026121 Ga0207683_10288765 Ga0207683_102887652 355
196 3300031649 Ga0307514_10004848 Ga0307514_100048482 355
197 3300031901 Ga0307406_10000034 Ga0307406_1000003460 355
198 3300031901 Ga0307406_10000751 Ga0307406_1000075115 355
199 3300031901 Ga0307406_10055254 Ga0307406_100552542 355
200 3300032004 Ga0307414_10119817 Ga0307414_101198172 355
201 3300037418 Ga0395900_0001424 Ga0395900_0001424_13591_14661 355
202 3300037466 Ga0395898_0000015 Ga0395898_0000015_127653_128723 355
203 3300037466 Ga0395898_0103162 Ga0395898_0103162_209_1276 355
204 3300041498 Ga0451841_1431726 Ga0451841_1431726_143_1219 355
205 3300044658 Ga0466972_0013187 Ga0466972_0013187_453_1529 355
206 3300044683 Ga0466965_0034930 Ga0466965_0034930_570_1646 355
207 3300044684 Ga0466966_0059490 Ga0466966_0059490_220_1290 355
208 3300044693 Ga0466961_0026463 Ga0466961_0026463_2381_3457 355
209 3300044765 Ga0466970_0000004 Ga0466970_0000004_55447_56520 355
210 3300044765 Ga0466970_0010739 Ga0466970_0010739_937_2007 355
211 3300044765 Ga0466970_0048545 Ga0466970_0048545_761_1837 355
212 3300044842 Ga0466957_0055187 Ga0466957_0055187_979_2052 355
213 3300044901 Ga0466960_0003386 Ga0466960_0003386_3013_4158 355
214 3300044901 Ga0466960_0012062 Ga0466960_0012062_621_1691 355
215 3300046453 Ga0495627_003540 Ga0495627_003540_5624_6700 355
216 3300046457 Ga0495590_0000279 Ga0495590_0000279_6109_7215 355
217 3300046471 Ga0495650_0049920 Ga0495650_0049920_464_1543 355
218 3300046543 Ga0495645_0013837 Ga0495645_0013837_935_2011 355
219 3300047320 Ga0495672_0010258 Ga0495672_0010258_245_1321 355
220 3300047472 Ga0495686_0203247 Ga0495686_0203247_31_1110 355
221 3300048906 Ga0496103_0025778 Ga0496103_0025778_2273_3349 355
222 3300048907 Ga0496104_0161630 Ga0496104_0161630_673_1749 355
223 3300048909 Ga0496106_0186782 Ga0496106_0186782_143_1219 355
224 3300048910 Ga0496107_0120827 Ga0496107_0120827_269_1345 355
225 3300048913 Ga0496110_0036278 Ga0496110_0036278_941_2017 355
226 3300048914 Ga0496111_0006379 Ga0496111_0006379_1547_2623 355
227 3300048914 Ga0496111_0211465 Ga0496111_0211465_12_1097 355
228 3300048915 Ga0496112_0354409 Ga0496112_0354409_252_1328 355
229 3300048916 Ga0496113_0056431 Ga0496113_0056431_1190_2257 355
230 3300048917 Ga0496114_0118255 Ga0496114_0118255_815_1891 355
231 3300048918 Ga0496115_0070006 Ga0496115_0070006_247_1323 355
232 3300048920 Ga0496117_0000232 Ga0496117_0000232_33638_34711 355
233 3300048920 Ga0496117_0008221 Ga0496117_0008221_2984_4051 355
234 3300048920 Ga0496117_0008243 Ga0496117_0008243_4882_5955 355
235 3300048920 Ga0496117_0016047 Ga0496117_0016047_4528_5601 355
236 3300048920 Ga0496117_0070655 Ga0496117_0070655_101_1171 355
237 3300048920 Ga0496117_0140903 Ga0496117_0140903_253_1329 355
238 3300048920 Ga0496117_0177730 Ga0496117_0177730_115_1182 355
239 3300048921 Ga0496118_0086065 Ga0496118_0086065_1076_2149 355
240 3300048922 Ga0496119_0000341 Ga0496119_0000341_48773_49858 355
241 3300048922 Ga0496119_0001189 Ga0496119_0001189_20947_22020 355
242 3300048922 Ga0496119_0013612 Ga0496119_0013612_2990_4060 355
243 3300048922 Ga0496119_0055686 Ga0496119_0055686_1249_2325 355
244 3300048923 Ga0496120_0001174 Ga0496120_0001174_29609_30682 355
245 3300048923 Ga0496120_0001282 Ga0496120_0001282_23457_24527 355
246 3300048923 Ga0496120_0016874 Ga0496120_0016874_2612_3685 355
247 3300048924 Ga0496121_0036887 Ga0496121_0036887_2047_3147 355
248 3300048925 Ga0496122_0000030 Ga0496122_0000030_174991_176061 355
249 3300048925 Ga0496122_0002594 Ga0496122_0002594_2238_3311 355
250 3300048925 Ga0496122_0003267 Ga0496122_0003267_11218_12291 355
251 3300048925 Ga0496122_0009200 Ga0496122_0009200_8834_9913 355
252 3300048925 Ga0496122_0019231 Ga0496122_0019231_814_1887 355
253 3300048925 Ga0496122_0034873 Ga0496122_0034873_1001_2077 355
254 3300048926 Ga0496123_0000024 Ga0496123_0000024_174992_176062 355
255 3300048926 Ga0496123_0000051 Ga0496123_0000051_26732_27805 355
256 3300048926 Ga0496123_0001799 Ga0496123_0001799_22363_23436 355
257 3300048926 Ga0496123_0048812 Ga0496123_0048812_147_1220 355
258 3300048927 Ga0496124_0001836 Ga0496124_0001836_17743_18816 355
259 3300048927 Ga0496124_0015886 Ga0496124_0015886_69_1142 355
260 3300048927 Ga0496124_0019623 Ga0496124_0019623_1173_2243 355
261 3300048927 Ga0496124_0088033 Ga0496124_0088033_533_1606 355
262 3300048928 Ga0496125_0004280 Ga0496125_0004280_2486_3565 355
263 3300048928 Ga0496125_0013039 Ga0496125_0013039_188_1261 355
264 3300048928 Ga0496125_0045381 Ga0496125_0045381_28_1101 355
265 3300048928 Ga0496125_0058120 Ga0496125_0058120_667_1743 355
266 3300048928 Ga0496125_0239420 Ga0496125_0239420_63_1142 355
267 3300048929 Ga0496126_0001194 Ga0496126_0001194_41101_42174 355
268 3300048929 Ga0496126_0028744 Ga0496126_0028744_2400_3470 355
269 3300048929 Ga0496126_0328983 Ga0496126_0328983_125_1198 355
270 3300049568 Ga0501031_0006867 Ga0501031_0006867_1129_2196 355
271 3300049568 Ga0501031_0045799 Ga0501031_0045799_89_1189 355
272 3300049569 Ga0501032_0006073 Ga0501032_0006073_4204_5271 355
273 3300049570 Ga0501033_0060697 Ga0501033_0060697_1246_2403 355
274 3300049571 Ga0501034_0000227 Ga0501034_0000227_37673_38755 355
275 3300049571 Ga0501034_0007115 Ga0501034_0007115_9518_10585 355
276 3300049573 Ga0501037_0000671 Ga0501037_0000671_3980_5047 355
277 3300049574 Ga0501038_0022915 Ga0501038_0022915_2710_3777 355
278 3300049575 Ga0501039_0283856 Ga0501039_0283856_169_1236 355
279 3300049579 Ga0501043_0319623 Ga0501043_0319623_20_1105 355
280 3300049580 Ga0501046_0005548 Ga0501046_0005548_9277_10344 355
281 3300049581 Ga0501047_0040937 Ga0501047_0040937_404_1561 355
282 3300049582 Ga0501048_0018628 Ga0501048_0018628_3924_4991 355
283 3300049584 Ga0501068_0031238 Ga0501068_0031238_477_1544 355
284 3300049586 Ga0501070_0000167 Ga0501070_0000167_59352_60422 355
285 3300049586 Ga0501070_0003210 Ga0501070_0003210_3765_4850 355
286 3300049586 Ga0501070_0056087 Ga0501070_0056087_2119_3186 355
287 3300049588 Ga0501072_0173800 Ga0501072_0173800_109_1176 355
288 3300049589 Ga0501073_0068680 Ga0501073_0068680_443_1510 355
289 3300049822 Ga0501035_0007336 Ga0501035_0007336_584_1651 355
290 3300049822 Ga0501035_0054023 Ga0501035_0054023_1537_2607 355
291 3300049823 Ga0501044_0002197 Ga0501044_0002197_2000_3157 355
292 3300049823 Ga0501044_0012751 Ga0501044_0012751_698_1765 355
293 3300053136 Ga0500559_0000102 Ga0500559_0000102_49513_50589 355
294 3300053139 Ga0500568_0000014 Ga0500568_0000014_206411_207493 355
295 3300053139 Ga0500568_0001189 Ga0500568_0001189_13228_14331 355
296 3300053140 Ga0500573_0000059 Ga0500573_0000059_34009_35091 355
297 3300053140 Ga0500573_0011605 Ga0500573_0011605_3486_4577 355
298 3300053730 Ga0500645_007225 Ga0500645_007225_2362_3474 355
299 3300060353 Ga0501082_0101573 Ga0501082_0101573_191_1258 355
300 iso_pu_bacteria 2738541272 2738692331 355
301 iso_pu_bacteria 2738543027 2739323417 355
302 iso_pu_bacteria 2758568522 2760303417 355
303 iso_pu_bacteria 2758568621 2760622689 355
304 iso_pu_bacteria 2811994872 2812322817 355
305 iso_pu_bacteria 8016254467 8016257902 355
306 iso_pu_bacteria 8056579771 8056584186 355

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03033

Glyco_transf_28

Glycosyltransferase family 28 N-terminal domain

1

140

0.94

PF04101

Glyco_tran_28_C

Glycosyltransferase family 28 C-terminal domain

185

345

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3s2u-assembly1.cif.gz_A crystal structure of the pseudomonas aeruginosa murg:udp-glcnac substrate complex 0.8844 3 355
3s2u-assembly1.cif.gz_A crystal structure of the pseudomonas aeruginosa murg:udp-glcnac substrate complex 0.8793 3 355
1nlm-assembly1.cif.gz_B crystal structure of murg:glcnac complex 0.8596 2 354
1nlm-assembly1.cif.gz_B crystal structure of murg:glcnac complex 0.8527 2 354
7d1i-assembly1.cif.gz_B-2 crystal structure of acinetobacter baumannii murg 0.8259 1 353
ID Description Score Start End Superfamily
af_P9WJK9_38_202_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9727 5 160 3.40.50.2000
af_P9WJK9_36_221_3.65.10.10 Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain 0.9707 2 177 3.65.10.10
3s2uA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9611 3 160 3.40.50.2000
af_P17443_6_162_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9565 2 161 3.40.50.2000
af_P17443_6_162_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9506 2 161 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A4Q4D5L1-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 0.9814 243 354 GO:0016758
AF-A0A3N1KEP5-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) 0.9738 1 354 GO:0005886
GO:0005975
GO:0008360
GO:0009252
GO:0030259
GO:0050511
GO:0051301
GO:0051991
GO:0071555
AF-A0A353ZPN7-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 0.9706 2 109 GO:0005975
GO:0016758
GO:0030259
GO:1901137
AF-A0A399T4W6-F1-model_v4 deleted 0.97 112 354
AF-A0A3N1KEP5-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) 0.9684 1 354 GO:0005886
GO:0005975
GO:0008360
GO:0009252
GO:0030259
GO:0050511
GO:0051301
GO:0051991
GO:0071555

Feature Viewer

pLDDT pTM Quality
93.33 0.91 High
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Predicted Structure (AlphaFold2)

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