F398915

General Info

Members Datasets Scaffolds Average Seq Length
306 186 612 245

Family's Representative Sequence

Representative Sequence 3300053133|Ga0500655_004692|Ga0500655_004692_788_1645
Length 285
Sequence MRGSGAIAPFKDRGGHYKSAQLRHCGEASHKSRKFRPVPMKPIVLIPARMASTRLPGKPLADIAGTPMIVRVWQQAVAAGIGPVVVAAAEAEIAAAIENAGGRAHLTPPNLPSGSDRIYAALQAIDPGATHDVVVNLQGDLPALDPSNIRAVAETLIETGADIATLAAEIDNAADRDSPSVVKPVVAWDASGVRGRALYFTRARAPHGGGPLYHHIGIYAFRREALARFVSLPPSPLEQREKLEQLRALEAGMTIAVARVDSVPLSVDTEEDLKKARALLSREKT

Samples

Sample ID Description Type Environment
1 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
34 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
93 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
94 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
97 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
98 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
102 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
107 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
108 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
109 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
110 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
111 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
119 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
122 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
123 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
124 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
125 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
126 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
132 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
137 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
138 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
139 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
140 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
149 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
163 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
164 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
165 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
166 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
167 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
181 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
182 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
183 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.59
Nodule 0
Rhizoplane 2.29
Rhizosphere 91.18
Stem 0
Stem Tuber 0
Unclassified 0.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500655_004692 3300053133 Bacteria 2457
2 rootH2_10000706 3300003320 Bacteria 22047
3 Ga0070658_10033651 3300005327 Bacteria 4124
4 Ga0070676_10367941 3300005328 Bacteria 992
5 Ga0070683_100113948 3300005329 Bacteria 2552
6 Ga0070670_100202162 3300005331 Bacteria 1726
7 Ga0070666_10005760 3300005335 Bacteria 7611
8 Ga0070680_100125087 3300005336 Bacteria 2148
9 Ga0070660_100013266 3300005339 Bacteria 5905
10 Ga0070689_100066029 3300005340 Bacteria 2818
11 Ga0070661_100000135 3300005344 Bacteria 61669
12 Ga0070669_100147679 3300005353 Bacteria 1817
13 Ga0070675_100370157 3300005354 Bacteria 1274
14 Ga0070667_100044665 3300005367 Bacteria 3722
15 Ga0070709_10004467 3300005434 Bacteria 7548
16 Ga0070713_100000006 3300005436 Bacteria 190565
17 Ga0070705_100105976 3300005440 Bacteria 1786
18 Ga0070681_10087374 3300005458 Bacteria 3071
19 Ga0070681_10117647 3300005458 Bacteria 2594
20 Ga0068867_100286086 3300005459 Bacteria 1354
21 Ga0070707_100021761 3300005468 Bacteria 6061
22 Ga0070699_100007732 3300005518 Bacteria 9343
23 Ga0070679_100007264 3300005530 Bacteria 10344
24 Ga0070679_100205615 3300005530 Bacteria 1933
25 Ga0068853_100079942 3300005539 Bacteria 2860
26 Ga0068853_100328181 3300005539 Bacteria 1419
27 Ga0068855_100000529 3300005563 Bacteria 46748
28 Ga0068855_100013919 3300005563 Bacteria 9702
29 Ga0068855_100041044 3300005563 Bacteria 5487
30 Ga0068855_100651195 3300005563 Bacteria 1131
31 Ga0070664_100406314 3300005564 Bacteria 1246
32 Ga0068856_100000280 3300005614 Bacteria 55488
33 Ga0068856_100049513 3300005614 Bacteria 4141
34 Ga0068856_100381440 3300005614 Bacteria 1429
35 Ga0068856_100597362 3300005614 Bacteria 1125
36 Ga0068852_100077156 3300005616 Bacteria 2944
37 Ga0068852_100151861 3300005616 Bacteria 2155
38 Ga0081455_10001842 3300005937 Bacteria 25516
39 Ga0081455_10147557 3300005937 Bacteria 1817
40 Ga0081538_10013135 3300005981 Bacteria 6577
41 Ga0081540_1013497 3300005983 Bacteria 5306
42 Ga0081539_10001495 3300005985 Bacteria 39548
43 Ga0075365_10107919 3300006038 Bacteria 1911
44 Ga0075365_10172644 3300006038 Bacteria 1509
45 Ga0075368_10013765 3300006042 Bacteria 2974
46 Ga0070715_10021079 3300006163 Bacteria 2522
47 Ga0070712_100000184 3300006175 Bacteria 34651
48 Ga0070712_100013650 3300006175 Bacteria 5195
49 Ga0070712_100293785 3300006175 Bacteria 1313
50 Ga0075366_10160607 3300006195 Bacteria 1362
51 Ga0097621_100214865 3300006237 Unclassified 1674
52 Ga0075428_100108033 3300006844 Bacteria 3032
53 Ga0075431_100319161 3300006847 Bacteria 1567
54 Ga0075433_10677550 3300006852 Bacteria 904
55 Ga0075434_100015152 3300006871 Bacteria 7385
56 Ga0075434_100024647 3300006871 Bacteria 5883
57 Ga0075434_100213348 3300006871 Bacteria 1950
58 Ga0075434_100221761 3300006871 Bacteria 1911
59 Ga0075434_100636922 3300006871 Bacteria 1085
60 Ga0075436_100001960 3300006914 Bacteria 14189
61 Ga0075435_100209644 3300007076 Bacteria 1653
62 Ga0105240_10000055 3300009093 Bacteria 225380
63 Ga0105240_10006992 3300009093 Bacteria 16479
64 Ga0105240_10053764 3300009093 Bacteria 5052
65 Ga0105240_10125434 3300009093 Bacteria 3085
66 Ga0111539_10045478 3300009094 Bacteria 5255
67 Ga0111539_11259939 3300009094 Bacteria 858
68 Ga0105245_10194586 3300009098 Bacteria 1944
69 Ga0105241_10227808 3300009174 Bacteria 1570
70 Ga0105248_10051064 3300009177 Bacteria 4640
71 Ga0105237_10150431 3300009545 Bacteria 2324
72 Ga0105237_10446185 3300009545 Bacteria 1300
73 Ga0105238_10001657 3300009551 Bacteria 22360
74 Ga0105238_10122311 3300009551 Bacteria 2582
75 Ga0105238_10491034 3300009551 Bacteria 1228
76 Ga0105239_10003373 3300010375 Bacteria 19598
77 Ga0105239_10006279 3300010375 Bacteria 13828
78 Ga0105239_10077694 3300010375 Bacteria 3653
79 Ga0157373_10020564 3300013100 Bacteria 4795
80 Ga0157371_10023804 3300013102 Bacteria 4476
81 Ga0157370_10016144 3300013104 Bacteria 7570
82 Ga0157370_10428749 3300013104 Bacteria 1216
83 Ga0157369_10031687 3300013105 Bacteria 5818
84 Ga0157369_10346471 3300013105 Bacteria 1543
85 Ga0157372_10580766 3300013307 Bacteria 1306
86 Ga0182008_10004538 3300014497 Bacteria 8102
87 Ga0157376_10127753 3300014969 Bacteria 2264
88 Ga0213876_10000167 3300021384 Bacteria 69385
89 Ga0213876_10020772 3300021384 Bacteria 3472
90 Ga0207692_10168834 3300025898 Bacteria 1266
91 Ga0207680_10003356 3300025903 Bacteria 7542
92 Ga0207699_10001108 3300025906 Bacteria 12731
93 Ga0207705_10000039 3300025909 Bacteria 193592
94 Ga0207705_10056872 3300025909 Bacteria 2821
95 Ga0207684_10088835 3300025910 Bacteria 2633
96 Ga0207654_10035639 3300025911 Bacteria 2774
97 Ga0207707_10000769 3300025912 Bacteria 31536
98 Ga0207707_10153582 3300025912 Bacteria 2013
99 Ga0207695_10000012 3300025913 Bacteria 840961
100 Ga0207695_10002080 3300025913 Bacteria 30492
101 Ga0207695_10077480 3300025913 Bacteria 3376
102 Ga0207695_10451953 3300025913 Bacteria 1168
103 Ga0207693_10000733 3300025915 Bacteria 29584
104 Ga0207693_10026939 3300025915 Bacteria 4546
105 Ga0207693_10214125 3300025915 Bacteria 1514
106 Ga0207663_10009123 3300025916 Bacteria 5230
107 Ga0207663_10366578 3300025916 Bacteria 1094
108 Ga0207660_10000346 3300025917 Bacteria 30071
109 Ga0207660_10136272 3300025917 Bacteria 1873
110 Ga0207657_10000635 3300025919 Bacteria 37241
111 Ga0207649_10000060 3300025920 Bacteria 99202
112 Ga0207649_10029731 3300025920 Bacteria 3229
113 Ga0207652_10000646 3300025921 Bacteria 34342
114 Ga0207652_10035816 3300025921 Bacteria 4192
115 Ga0207694_10000006 3300025924 Bacteria 631109
116 Ga0207694_10092480 3300025924 Bacteria 2387
117 Ga0207694_10125576 3300025924 Bacteria 2052
118 Ga0207687_10078196 3300025927 Bacteria 2381
119 Ga0207687_10299694 3300025927 Bacteria 1294
120 Ga0207700_10000020 3300025928 Bacteria 176182
121 Ga0207700_10026331 3300025928 Bacteria 4053
122 Ga0207664_10039598 3300025929 Bacteria 3660
123 Ga0207644_10998258 3300025931 Unclassified 702
124 Ga0207690_10014146 3300025932 Bacteria 4813
125 Ga0207665_10035256 3300025939 Bacteria 3320
126 Ga0207665_10093009 3300025939 Bacteria 2093
127 Ga0207711_10028797 3300025941 Bacteria 4678
128 Ga0207711_10151019 3300025941 Bacteria 2096
129 Ga0207661_10016398 3300025944 Bacteria 5465
130 Ga0207667_10000026 3300025949 Bacteria 343713
131 Ga0207667_10005384 3300025949 Bacteria 15603
132 Ga0207667_10050584 3300025949 Bacteria 4384
133 Ga0207667_10138013 3300025949 Bacteria 2511
134 Ga0207667_10461988 3300025949 Bacteria 1289
135 Ga0207658_10032801 3300025986 Bacteria 3700
136 Ga0207639_10043608 3300026041 Bacteria 3369
137 Ga0207639_10061808 3300026041 Bacteria 2894
138 Ga0207639_10243142 3300026041 Bacteria 1566
139 Ga0207702_10000030 3300026078 Bacteria 178718
140 Ga0207702_10032759 3300026078 Bacteria 4337
141 Ga0207702_10552936 3300026078 Bacteria 1126
142 Ga0207676_10098643 3300026095 Bacteria 2416
143 Ga0207674_10052134 3300026116 Bacteria 4173
144 Ga0207698_10198101 3300026142 Bacteria 1796
145 Ga0207698_11064144 3300026142 Bacteria 821
146 Ga0209588_1051306 3300027671 Bacteria 1334
147 Ga0268266_10230520 3300028379 Bacteria 1706
148 Ga0268266_10421698 3300028379 Bacteria 1264
149 Ga0265337_1005647 3300028556 Bacteria 4932
150 Ga0265334_10003807 3300028573 Bacteria 6819
151 Ga0265338_10017371 3300028800 Bacteria 7761
152 Ga0265338_10246959 3300028800 Bacteria 1318
153 Ga0265338_10370353 3300028800 Bacteria 1026
154 Ga0265320_10000123 3300031240 Bacteria 67449
155 Ga0265325_10008382 3300031241 Bacteria 6102
156 Ga0265325_10076001 3300031241 Bacteria 1677
157 Ga0265325_10158331 3300031241 Bacteria 1067
158 Ga0265340_10054934 3300031247 Bacteria 1920
159 Ga0265339_10091717 3300031249 Bacteria 1591
160 Ga0265331_10000049 3300031250 Bacteria 182618
161 Ga0265331_10028163 3300031250 Bacteria 2811
162 Ga0265316_10097191 3300031344 Bacteria 2242
163 Ga0265313_10000110 3300031595 Bacteria 82958
164 Ga0265313_10046735 3300031595 Bacteria 2100
165 Ga0316575_10049321 3300031665 Bacteria 1675
166 Ga0265314_10005497 3300031711 Bacteria 11415
167 Ga0265314_10011620 3300031711 Bacteria 7248
168 Ga0265314_10014015 3300031711 Bacteria 6444
169 Ga0265314_10024563 3300031711 Bacteria 4566
170 Ga0265314_10026995 3300031711 Bacteria 4306
171 Ga0265314_10036869 3300031711 Bacteria 3548
172 Ga0265314_10122813 3300031711 Bacteria 1632
173 Ga0265342_10020526 3300031712 Bacteria 4234
174 Ga0316576_10000796 3300031727 Bacteria 15878
175 Ga0316576_10006770 3300031727 Bacteria 7163
176 Ga0307516_10022630 3300031730 Bacteria 6452
177 Ga0373950_0023538 3300034818 Bacteria 1102
178 Ga0373923_0110561 3300035111 Bacteria 1220
179 Ga0373954_0102315 3300035118 Bacteria 1383
180 Ga0373955_0085494 3300035172 Bacteria 1790
181 Ga0373955_0102906 3300035172 Bacteria 1642
182 Ga0373933_0033514 3300035724 Bacteria 2988
183 Ga0373933_0265501 3300035724 Bacteria 1107
184 Ga0373937_0008042 3300036401 Bacteria 9146
185 Ga0373937_0304557 3300036401 Bacteria 1506
186 Ga0316584_0316807 3300036712 Bacteria 1126
187 Ga0395899_0216381 3300037312 Bacteria 1329
188 Ga0395899_0310052 3300037312 Bacteria 1066
189 Ga0395900_0077084 3300037418 Bacteria 3425
190 Ga0395898_0033017 3300037466 Bacteria 5166
191 Ga0395898_0154614 3300037466 Bacteria 2194
192 Ga0395905_0136967 3300037471 Bacteria 2304
193 Ga0400485_09090 3300038735 Bacteria 1989
194 Ga0400487_66119 3300039110 Bacteria 1534
195 Ga0436365_1291084 3300039437 Bacteria 167262
196 Ga0436365_1809190 3300039437 Bacteria 4490
197 Ga0436361_0255417 3300039447 Bacteria 5940
198 Ga0436363_0421375 3300039450 Bacteria 2248
199 Ga0436362_1219639 3300039453 Bacteria 2807
200 Ga0439443_003140 3300042003 Bacteria 2052
201 Ga0439435_0003016 3300042436 Bacteria 3439
202 Ga0466966_0286248 3300044684 Bacteria 991
203 Ga0453684_0000062 3300044712 Bacteria 487590
204 Ga0451576_0001683 3300045051 Bacteria 36623
205 Ga0495651_0157766 3300046462 Bacteria 1629
206 Ga0495580_0068291 3300046472 Bacteria 2486
207 Ga0495664_0067810 3300046477 Bacteria 2129
208 Ga0495630_0315387 3300046517 Bacteria 1195
209 Ga0495652_0032252 3300046529 Bacteria 4583
210 Ga0495652_0163355 3300046529 Bacteria 1726
211 Ga0495652_0335423 3300046529 Bacteria 1088
212 Ga0495665_0006064 3300046531 Bacteria 6520
213 Ga0495645_0082293 3300046543 Bacteria 2309
214 Ga0495635_0307794 3300046663 Bacteria 1062
215 Ga0495657_0212794 3300046675 Bacteria 1175
216 Ga0495671_0110456 3300046692 Bacteria 1343
217 Ga0495604_0065611 3300047317 Bacteria 2763
218 Ga0495674_0173531 3300047319 Bacteria 1798
219 Ga0495602_0146664 3300048088 Bacteria 1861
220 Ga0496100_0122286 3300048903 Bacteria 1823
221 Ga0496102_0003408 3300048905 Bacteria 13478
222 Ga0496109_0155180 3300048912 Bacteria 2144
223 Ga0496110_0021161 3300048913 Bacteria 5499
224 Ga0496110_0052267 3300048913 Bacteria 3591
225 Ga0496111_0106089 3300048914 Bacteria 2068
226 Ga0496112_0224207 3300048915 Bacteria 1835
227 Ga0495682_0004223 3300049460 Bacteria 6214
228 Ga0501033_0030327 3300049570 Bacteria 4064
229 Ga0501033_0045417 3300049570 Bacteria 3269
230 Ga0501033_0056367 3300049570 Bacteria 2904
231 Ga0501034_0154085 3300049571 Bacteria 2273
232 Ga0501037_0076311 3300049573 Bacteria 2433
233 Ga0501037_0133352 3300049573 Bacteria 1780
234 Ga0501037_0176583 3300049573 Bacteria 1517
235 Ga0501038_0077024 3300049574 Unclassified 2816
236 Ga0501038_0166534 3300049574 Bacteria 1787
237 Ga0501039_0220989 3300049575 Bacteria 1489
238 Ga0501039_0402139 3300049575 Bacteria 1075
239 Ga0501040_0163327 3300049576 Bacteria 1575
240 Ga0501041_0148740 3300049577 Bacteria 1462
241 Ga0501041_0200916 3300049577 Bacteria 1249
242 Ga0501042_0147355 3300049578 Bacteria 1697
243 Ga0501043_0030542 3300049579 Bacteria 4235
244 Ga0501046_0117964 3300049580 Bacteria 2021
245 Ga0501046_0129842 3300049580 Bacteria 1912
246 Ga0501046_0155702 3300049580 Bacteria 1722
247 Ga0501046_0526381 3300049580 Bacteria 845
248 Ga0501047_0015542 3300049581 Bacteria 7252
249 Ga0501047_0119176 3300049581 Bacteria 2521
250 Ga0501047_0155037 3300049581 Bacteria 2164
251 Ga0501047_0272125 3300049581 Bacteria 1540
252 Ga0501047_0629191 3300049581 Bacteria 893
253 Ga0501048_0163442 3300049582 Bacteria 1576
254 Ga0501048_0299510 3300049582 Bacteria 1144
255 Ga0501048_0369499 3300049582 Bacteria 1024
256 Ga0501048_0431749 3300049582 Bacteria 943
257 Ga0501070_0000248 3300049586 Bacteria 50746
258 Ga0501070_0008951 3300049586 Bacteria 8466
259 Ga0501071_0190500 3300049587 Bacteria 1538
260 Ga0501072_0001050 3300049588 Bacteria 20466
261 Ga0501072_0014190 3300049588 Bacteria 6105
262 Ga0501073_0111115 3300049589 Bacteria 1901
263 Ga0501074_0053153 3300049590 Bacteria 2924
264 Ga0501074_0111036 3300049590 Bacteria 1962
265 Ga0501074_0303066 3300049590 Bacteria 1135
266 Ga0501075_0165846 3300049591 Bacteria 1685
267 Ga0501076_0284300 3300049592 Bacteria 1355
268 Ga0501079_0132356 3300049741 Bacteria 1941
269 Ga0501079_0572432 3300049741 Bacteria 888
270 Ga0501080_0000973 3300049742 Bacteria 23429
271 Ga0501080_0305209 3300049742 Bacteria 1443
272 Ga0501081_0239597 3300049743 Bacteria 1322
273 Ga0501081_0708986 3300049743 Bacteria 756
274 Ga0501035_0013887 3300049822 Bacteria 7431
275 Ga0501035_0124886 3300049822 Bacteria 2247
276 Ga0501044_0000644 3300049823 Bacteria 42176
277 Ga0501044_0004555 3300049823 Bacteria 15501
278 Ga0501044_0017904 3300049823 Bacteria 7598
279 Ga0501044_0059768 3300049823 Bacteria 3904
280 Ga0501044_0212840 3300049823 Bacteria 1886
281 Ga0501044_0263867 3300049823 Bacteria 1660
282 Ga0501045_0186818 3300049824 Bacteria 1544
283 Ga0501045_0296002 3300049824 Bacteria 1204
284 nmdc:mga03n38_43202_c1 3300050490 Bacteria 1974
285 nmdc:mga05p37_293956_c1 3300050507 Bacteria 1933
286 nmdc:mga08y16_47469_c1 3300050511 Bacteria 4494
287 nmdc:mga0n895_100937_c1 3300050512 Bacteria 2895
288 nmdc:mga0n895_13443_c1 3300050512 Bacteria 7385
289 nmdc:mga0n895_63702_c1 3300050512 Bacteria 3646
290 nmdc:mga08x19_186940_c1 3300050514 Bacteria 1416
291 nmdc:mga08x19_460_c1 3300050514 Bacteria 27547
292 nmdc:mga0a205_243626_c1 3300050515 Bacteria 1679
293 nmdc:mga0a205_350672_c1 3300050515 Bacteria 1343
294 Ga0500651_0002718 3300053093 Bacteria 9435
295 Ga0500595_038782 3300053119 Bacteria 1546
296 Ga0500652_031779 3300053131 Bacteria 2074
297 Ga0500655_012780 3300053133 Bacteria 1527
298 Ga0500559_0012151 3300053136 Bacteria 3666
299 Ga0501084_0000971 3300054114 Bacteria 22218
300 Ga0501084_0053967 3300054114 Bacteria 3362
301 Ga0501084_0132310 3300054114 Bacteria 2100
302 Ga0501082_0158523 3300060353 Bacteria 1966
303 Ga0501082_0192671 3300060353 Bacteria 1773
304 Ga0501082_0439292 3300060353 Bacteria 1140
305 Ga0530510_0035568 3300061734 Bacteria 3590
306 Ga0530510_0124768 3300061734 Bacteria 1892
307 Ga0500655_004692
308 rootH2_10000706
309 Ga0070658_10033651
310 Ga0070676_10367941
311 Ga0070683_100113948
312 Ga0070670_100202162
313 Ga0070666_10005760
314 Ga0070680_100125087
315 Ga0070660_100013266
316 Ga0070689_100066029
317 Ga0070661_100000135
318 Ga0070669_100147679
319 Ga0070675_100370157
320 Ga0070667_100044665
321 Ga0070709_10004467
322 Ga0070713_100000006
323 Ga0070705_100105976
324 Ga0070681_10087374
325 Ga0070681_10117647
326 Ga0068867_100286086
327 Ga0070707_100021761
328 Ga0070699_100007732
329 Ga0070679_100007264
330 Ga0070679_100205615
331 Ga0068853_100079942
332 Ga0068853_100328181
333 Ga0068855_100000529
334 Ga0068855_100013919
335 Ga0068855_100041044
336 Ga0068855_100651195
337 Ga0070664_100406314
338 Ga0068856_100000280
339 Ga0068856_100049513
340 Ga0068856_100381440
341 Ga0068856_100597362
342 Ga0068852_100077156
343 Ga0068852_100151861
344 Ga0081455_10001842
345 Ga0081455_10147557
346 Ga0081538_10013135
347 Ga0081540_1013497
348 Ga0081539_10001495
349 Ga0075365_10107919
350 Ga0075365_10172644
351 Ga0075368_10013765
352 Ga0070715_10021079
353 Ga0070712_100000184
354 Ga0070712_100013650
355 Ga0070712_100293785
356 Ga0075366_10160607
357 Ga0097621_100214865
358 Ga0075428_100108033
359 Ga0075431_100319161
360 Ga0075433_10677550
361 Ga0075434_100015152
362 Ga0075434_100024647
363 Ga0075434_100213348
364 Ga0075434_100221761
365 Ga0075434_100636922
366 Ga0075436_100001960
367 Ga0075435_100209644
368 Ga0105240_10000055
369 Ga0105240_10006992
370 Ga0105240_10053764
371 Ga0105240_10125434
372 Ga0111539_10045478
373 Ga0111539_11259939
374 Ga0105245_10194586
375 Ga0105241_10227808
376 Ga0105248_10051064
377 Ga0105237_10150431
378 Ga0105237_10446185
379 Ga0105238_10001657
380 Ga0105238_10122311
381 Ga0105238_10491034
382 Ga0105239_10003373
383 Ga0105239_10006279
384 Ga0105239_10077694
385 Ga0157373_10020564
386 Ga0157371_10023804
387 Ga0157370_10016144
388 Ga0157370_10428749
389 Ga0157369_10031687
390 Ga0157369_10346471
391 Ga0157372_10580766
392 Ga0182008_10004538
393 Ga0157376_10127753
394 Ga0213876_10000167
395 Ga0213876_10020772
396 Ga0207692_10168834
397 Ga0207680_10003356
398 Ga0207699_10001108
399 Ga0207705_10000039
400 Ga0207705_10056872
401 Ga0207684_10088835
402 Ga0207654_10035639
403 Ga0207707_10000769
404 Ga0207707_10153582
405 Ga0207695_10000012
406 Ga0207695_10002080
407 Ga0207695_10077480
408 Ga0207695_10451953
409 Ga0207693_10000733
410 Ga0207693_10026939
411 Ga0207693_10214125
412 Ga0207663_10009123
413 Ga0207663_10366578
414 Ga0207660_10000346
415 Ga0207660_10136272
416 Ga0207657_10000635
417 Ga0207649_10000060
418 Ga0207649_10029731
419 Ga0207652_10000646
420 Ga0207652_10035816
421 Ga0207694_10000006
422 Ga0207694_10092480
423 Ga0207694_10125576
424 Ga0207687_10078196
425 Ga0207687_10299694
426 Ga0207700_10000020
427 Ga0207700_10026331
428 Ga0207664_10039598
429 Ga0207644_10998258
430 Ga0207690_10014146
431 Ga0207665_10035256
432 Ga0207665_10093009
433 Ga0207711_10028797
434 Ga0207711_10151019
435 Ga0207661_10016398
436 Ga0207667_10000026
437 Ga0207667_10005384
438 Ga0207667_10050584
439 Ga0207667_10138013
440 Ga0207667_10461988
441 Ga0207658_10032801
442 Ga0207639_10043608
443 Ga0207639_10061808
444 Ga0207639_10243142
445 Ga0207702_10000030
446 Ga0207702_10032759
447 Ga0207702_10552936
448 Ga0207676_10098643
449 Ga0207674_10052134
450 Ga0207698_10198101
451 Ga0207698_11064144
452 Ga0209588_1051306
453 Ga0268266_10230520
454 Ga0268266_10421698
455 Ga0265337_1005647
456 Ga0265334_10003807
457 Ga0265338_10017371
458 Ga0265338_10246959
459 Ga0265338_10370353
460 Ga0265320_10000123
461 Ga0265325_10008382
462 Ga0265325_10076001
463 Ga0265325_10158331
464 Ga0265340_10054934
465 Ga0265339_10091717
466 Ga0265331_10000049
467 Ga0265331_10028163
468 Ga0265316_10097191
469 Ga0265313_10000110
470 Ga0265313_10046735
471 Ga0316575_10049321
472 Ga0265314_10005497
473 Ga0265314_10011620
474 Ga0265314_10014015
475 Ga0265314_10024563
476 Ga0265314_10026995
477 Ga0265314_10036869
478 Ga0265314_10122813
479 Ga0265342_10020526
480 Ga0316576_10000796
481 Ga0316576_10006770
482 Ga0307516_10022630
483 Ga0373950_0023538
484 Ga0373923_0110561
485 Ga0373954_0102315
486 Ga0373955_0085494
487 Ga0373955_0102906
488 Ga0373933_0033514
489 Ga0373933_0265501
490 Ga0373937_0008042
491 Ga0373937_0304557
492 Ga0316584_0316807
493 Ga0395899_0216381
494 Ga0395899_0310052
495 Ga0395900_0077084
496 Ga0395898_0033017
497 Ga0395898_0154614
498 Ga0395905_0136967
499 Ga0400485_09090
500 Ga0400487_66119
501 Ga0436365_1291084
502 Ga0436365_1809190
503 Ga0436361_0255417
504 Ga0436363_0421375
505 Ga0436362_1219639
506 Ga0439443_003140
507 Ga0439435_0003016
508 Ga0466966_0286248
509 Ga0453684_0000062
510 Ga0451576_0001683
511 Ga0495651_0157766
512 Ga0495580_0068291
513 Ga0495664_0067810
514 Ga0495630_0315387
515 Ga0495652_0032252
516 Ga0495652_0163355
517 Ga0495652_0335423
518 Ga0495665_0006064
519 Ga0495645_0082293
520 Ga0495635_0307794
521 Ga0495657_0212794
522 Ga0495671_0110456
523 Ga0495604_0065611
524 Ga0495674_0173531
525 Ga0495602_0146664
526 Ga0496100_0122286
527 Ga0496102_0003408
528 Ga0496109_0155180
529 Ga0496110_0021161
530 Ga0496110_0052267
531 Ga0496111_0106089
532 Ga0496112_0224207
533 Ga0495682_0004223
534 Ga0501033_0030327
535 Ga0501033_0045417
536 Ga0501033_0056367
537 Ga0501034_0154085
538 Ga0501037_0076311
539 Ga0501037_0133352
540 Ga0501037_0176583
541 Ga0501038_0077024
542 Ga0501038_0166534
543 Ga0501039_0220989
544 Ga0501039_0402139
545 Ga0501040_0163327
546 Ga0501041_0148740
547 Ga0501041_0200916
548 Ga0501042_0147355
549 Ga0501043_0030542
550 Ga0501046_0117964
551 Ga0501046_0129842
552 Ga0501046_0155702
553 Ga0501046_0526381
554 Ga0501047_0015542
555 Ga0501047_0119176
556 Ga0501047_0155037
557 Ga0501047_0272125
558 Ga0501047_0629191
559 Ga0501048_0163442
560 Ga0501048_0299510
561 Ga0501048_0369499
562 Ga0501048_0431749
563 Ga0501070_0000248
564 Ga0501070_0008951
565 Ga0501071_0190500
566 Ga0501072_0001050
567 Ga0501072_0014190
568 Ga0501073_0111115
569 Ga0501074_0053153
570 Ga0501074_0111036
571 Ga0501074_0303066
572 Ga0501075_0165846
573 Ga0501076_0284300
574 Ga0501079_0132356
575 Ga0501079_0572432
576 Ga0501080_0000973
577 Ga0501080_0305209
578 Ga0501081_0239597
579 Ga0501081_0708986
580 Ga0501035_0013887
581 Ga0501035_0124886
582 Ga0501044_0000644
583 Ga0501044_0004555
584 Ga0501044_0017904
585 Ga0501044_0059768
586 Ga0501044_0212840
587 Ga0501044_0263867
588 Ga0501045_0186818
589 Ga0501045_0296002
590 nmdc:mga03n38_43202_c1
591 nmdc:mga05p37_293956_c1
592 nmdc:mga08y16_47469_c1
593 nmdc:mga0n895_100937_c1
594 nmdc:mga0n895_13443_c1
595 nmdc:mga0n895_63702_c1
596 nmdc:mga08x19_186940_c1
597 nmdc:mga08x19_460_c1
598 nmdc:mga0a205_243626_c1
599 nmdc:mga0a205_350672_c1
600 Ga0500651_0002718
601 Ga0500595_038782
602 Ga0500652_031779
603 Ga0500655_012780
604 Ga0500559_0012151
605 Ga0501084_0000971
606 Ga0501084_0053967
607 Ga0501084_0132310
608 Ga0501082_0158523
609 Ga0501082_0192671
610 Ga0501082_0439292
611 Ga0530510_0035568
612 Ga0530510_0124768

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02348

CTP_transf_3

Cytidylyltransferase

43

255

0.9

PF12804

NTP_transf_3

MobA-like NTP transferase domain

48

207

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gq9-assembly1.cif.gz_B the structure of cmp:2-keto-3-deoxy-manno-octonic acid synthetase complexed with ctp at 100k 0.9368 1 244
1gq9-assembly1.cif.gz_B the structure of cmp:2-keto-3-deoxy-manno-octonic acid synthetase complexed with ctp at 100k 0.9292 1 244
3oam-assembly2.cif.gz_D crystal structure of cytidylyltransferase from vibrio cholerae 0.9225 4 243
4xwi-assembly1.cif.gz_A x-ray crystal structure of cmp-kdo synthase from pseudomonas aeruginosa 0.9188 3 242
1vic-assembly3.cif.gz_B crystal structure of cmp-kdo synthetase 0.9151 4 243
ID Description Score Start End Superfamily
1h7eA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9258 1 245 3.90.550.10
af_I1LT34_51_301_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9193 3 241 3.90.550.10
1h7eA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9075 1 245 3.90.550.10
3k8eD00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9067 4 240 3.90.550.10
2y6pC00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9004 4 240 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A848ZA23-F1-model_v4 NTP transferase domain-containing protein 0.9933 2 97 GO:0005829
GO:0008690
GO:0009103
AF-A0A239C9T8-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase) 0.9911 1 242 GO:0005829
GO:0008690
GO:0009103
GO:0033468
AF-A0A357CHF1-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase 0.9903 2 108 GO:0005829
GO:0008690
GO:0009103
AF-Q2VZK3-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase) 0.989 1 241 GO:0005829
GO:0008690
GO:0009103
GO:0033468
AF-A0A679JCL7-F1-model_v4 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase) 0.9882 2 240 GO:0005829
GO:0008690
GO:0009103
GO:0033468

Map