F398773

General Info

Members Datasets Scaffolds Average Seq Length
306 218 612 384

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0021234|Ga0395898_0021234_329_1630
Length 433
Sequence MARDAGQSVLVTDLMTPPAAPTRAPGEQREGGPAAGGPVLPPLRIGRHVIESPVVLAPMAGITNRAFRRLCREYGDEGAALASARGASGATSLYVSEMITSRALVERSPETMRLIEHDPEEHPRSIQLYSVDPATARAAARILVQEDRADHLDLNFGCPVPKVTRKGGGSALPWKKDLFRRIVAAVVEEGARRDVPVTVKMRKGIDDEHLTFLDAGLAAEQEGAAAVALHGRTASQAYSGTADWAAIRALKETVTSVPVLGNGDIWSAEDALRMVAETGCDGVVVGRGCLGRPWLFTDLAAAFAGSSARVMPRLGEVTRTLRTHAEYLTDFYGEEERACRDIRKHIAWYLKGFPAGSTVRNSLALVDSLAALDALLGALDPDVPWPGEAAEGQRGRAGSPRRVALPDGWLDSPELSEEHERTLAEAELSVSGG

Samples

Sample ID Description Type Environment
1 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
82 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
83 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
84 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
87 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
88 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
98 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
99 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
107 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
108 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
109 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
110 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
111 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
112 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
113 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
114 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
115 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
116 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
119 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
120 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
121 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
122 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
123 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
124 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
125 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
126 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
127 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
128 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
129 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
132 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
137 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
138 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
139 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
140 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
143 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
144 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
145 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
157 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
173 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
176 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
177 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
178 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
179 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
180 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
184 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
185 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
186 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
189 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
190 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
191 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
194 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
195 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
196 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
197 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
198 2643221679 Angustibacter sp. Root456 Isolate Unclassified
199 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
200 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
201 2643221711 Terrabacter sp. Root85 Isolate Unclassified
202 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
203 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
204 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
205 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
206 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
207 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
208 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
209 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
210 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
211 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
212 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
213 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
214 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
215 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
216 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
217 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
218 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.48
Metatranscriptomes 0
Isolates 7.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.65
Nodule 0
Rhizoplane 10.46
Rhizosphere 80.07
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395898_0021234 3300037466 Bacteria 6586
2 Ga0070658_10001130 3300005327 Bacteria 22743
3 Ga0070658_10079119 3300005327 Bacteria 2699
4 Ga0070658_10326068 3300005327 Bacteria 1312
5 Ga0070683_100015109 3300005329 Bacteria 6776
6 Ga0070683_100050939 3300005329 Bacteria 3835
7 Ga0070683_100051998 3300005329 Bacteria 3795
8 Ga0070683_100155232 3300005329 Bacteria 2171
9 Ga0070670_100088485 3300005331 Bacteria 2662
10 Ga0068869_100029076 3300005334 Bacteria 3868
11 Ga0070680_100000500 3300005336 Bacteria 26955
12 Ga0068868_100109309 3300005338 Bacteria 2245
13 Ga0070660_100023435 3300005339 Bacteria 4573
14 Ga0070660_100114229 3300005339 Bacteria 2151
15 Ga0070660_100183855 3300005339 Bacteria 1692
16 Ga0070687_100133682 3300005343 Bacteria 1435
17 Ga0070661_100012074 3300005344 Bacteria 6037
18 Ga0070675_100007281 3300005354 Bacteria 8536
19 Ga0070674_100089784 3300005356 Bacteria 2215
20 Ga0070659_100000246 3300005366 Bacteria 42640
21 Ga0070659_100003542 3300005366 Bacteria 11124
22 Ga0070659_100011976 3300005366 Bacteria 6420
23 Ga0070705_100137431 3300005440 Bacteria 1603
24 Ga0070700_100050274 3300005441 Bacteria 2591
25 Ga0070663_100013649 3300005455 Bacteria 5188
26 Ga0070678_100069101 3300005456 Bacteria 2636
27 Ga0070681_10001741 3300005458 Bacteria 19507
28 Ga0070681_10017407 3300005458 Bacteria 7182
29 Ga0070681_10054247 3300005458 Bacteria 3994
30 Ga0070679_100000585 3300005530 Bacteria 30817
31 Ga0070679_100013225 3300005530 Bacteria 7900
32 Ga0070679_100091103 3300005530 Bacteria 3037
33 Ga0070679_100178599 3300005530 Bacteria 2096
34 Ga0070684_100043273 3300005535 Bacteria 3888
35 Ga0070696_100006150 3300005546 Bacteria 8021
36 Ga0070665_100186605 3300005548 Bacteria 2074
37 Ga0070704_100232735 3300005549 Bacteria 1504
38 Ga0070664_100005880 3300005564 Bacteria 9903
39 Ga0068857_100033464 3300005577 Bacteria 4546
40 Ga0068854_100199762 3300005578 Bacteria 1571
41 Ga0070702_100002594 3300005615 Bacteria 7865
42 Ga0068852_100005067 3300005616 Bacteria 9376
43 Ga0068859_100038330 3300005617 Bacteria 4809
44 Ga0068864_100145967 3300005618 Bacteria 2139
45 Ga0068863_100089820 3300005841 Bacteria 2913
46 Ga0068862_100032781 3300005844 Bacteria 4388
47 Ga0081539_10009704 3300005985 Bacteria 7968
48 Ga0081539_10013505 3300005985 Bacteria 6146
49 Ga0081539_10022325 3300005985 Bacteria 4192
50 Ga0081539_10059496 3300005985 Bacteria 2103
51 Ga0075430_100002952 3300006846 Bacteria 14232
52 Ga0075430_100017646 3300006846 Bacteria 6078
53 Ga0075429_100021782 3300006880 Bacteria 5557
54 Ga0075429_100027764 3300006880 Bacteria 4912
55 Ga0097620_100038330 3300006931 Bacteria 4809
56 Ga0111539_10005761 3300009094 Bacteria 16014
57 Ga0105245_10023953 3300009098 Bacteria 5358
58 Ga0105245_10031358 3300009098 Bacteria 4703
59 Ga0114129_10021772 3300009147 Bacteria 9098
60 Ga0105243_10053957 3300009148 Bacteria 3189
61 Ga0105242_10016264 3300009176 Bacteria 5783
62 Ga0105242_10040095 3300009176 Bacteria 3773
63 Ga0105248_10104658 3300009177 Bacteria 3191
64 Ga0105238_10142128 3300009551 Bacteria 2376
65 Ga0105239_10134022 3300010375 Bacteria 2757
66 Ga0105239_10498562 3300010375 Bacteria 1384
67 Ga0157371_10009718 3300013102 Bacteria 7550
68 Ga0157370_10151657 3300013104 Bacteria 2157
69 Ga0157369_10000069 3300013105 Bacteria 143271
70 Ga0157369_10003534 3300013105 Bacteria 18579
71 Ga0157369_10045168 3300013105 Bacteria 4793
72 Ga0157369_10097009 3300013105 Bacteria 3145
73 Ga0157369_10117430 3300013105 Bacteria 2824
74 Ga0157369_10177402 3300013105 Bacteria 2243
75 Ga0157378_10053523 3300013297 Bacteria 3593
76 Ga0163162_10250257 3300013306 Bacteria 1904
77 Ga0157372_10067111 3300013307 Bacteria 4030
78 Ga0157375_10019758 3300013308 Bacteria 6137
79 Ga0157380_10026239 3300014326 Bacteria 4423
80 Ga0157380_10043030 3300014326 Bacteria 3533
81 Ga0157380_10091114 3300014326 Bacteria 2516
82 Ga0157377_10013788 3300014745 Bacteria 4097
83 Ga0207705_10001536 3300025909 Bacteria 18310
84 Ga0207705_10203670 3300025909 Bacteria 1500
85 Ga0207707_10000365 3300025912 Bacteria 47411
86 Ga0207707_10171757 3300025912 Bacteria 1894
87 Ga0207671_10115853 3300025914 Bacteria 2043
88 Ga0207660_10001520 3300025917 Bacteria 15587
89 Ga0207660_10225872 3300025917 Bacteria 1471
90 Ga0207657_10073084 3300025919 Bacteria 2899
91 Ga0207657_10162108 3300025919 Bacteria 1816
92 Ga0207649_10016968 3300025920 Bacteria 4119
93 Ga0207652_10000434 3300025921 Bacteria 43399
94 Ga0207652_10096831 3300025921 Bacteria 2600
95 Ga0207652_10156954 3300025921 Bacteria 2039
96 Ga0207652_10274397 3300025921 Bacteria 1521
97 Ga0207659_10004834 3300025926 Bacteria 8166
98 Ga0207687_10019128 3300025927 Bacteria 4534
99 Ga0207690_10000065 3300025932 Bacteria 94536
100 Ga0207690_10011919 3300025932 Bacteria 5198
101 Ga0207690_10025650 3300025932 Bacteria 3704
102 Ga0207686_10102553 3300025934 Bacteria 1913
103 Ga0207709_10008295 3300025935 Bacteria 5755
104 Ga0207709_10034063 3300025935 Bacteria 2998
105 Ga0207709_10181117 3300025935 Bacteria 1488
106 Ga0207711_10305976 3300025941 Bacteria 1467
107 Ga0207689_10044504 3300025942 Bacteria 3670
108 Ga0207661_10003535 3300025944 Bacteria 10855
109 Ga0207661_10034417 3300025944 Bacteria 3939
110 Ga0207679_10007509 3300025945 Bacteria 6919
111 Ga0207640_10116784 3300025981 Bacteria 1903
112 Ga0207677_10012914 3300026023 Bacteria 4822
113 Ga0207677_10067633 3300026023 Bacteria 2504
114 Ga0207678_10041761 3300026067 Bacteria 3976
115 Ga0207674_10051647 3300026116 Bacteria 4195
116 Ga0207674_10056802 3300026116 Bacteria 3971
117 Ga0207683_10017193 3300026121 Bacteria 6159
118 Ga0268266_10130805 3300028379 Bacteria 2245
119 Ga0268266_10154123 3300028379 Bacteria 2074
120 Ga0265334_10004961 3300028573 Bacteria 5852
121 Ga0307515_10060479 3300028794 Bacteria 5400
122 Ga0265325_10017410 3300031241 Bacteria 3994
123 Ga0265340_10004749 3300031247 Bacteria 7552
124 Ga0307513_10000001 3300031456 Bacteria 1660464
125 Ga0307513_10009763 3300031456 Bacteria 12120
126 Ga0307509_10004585 3300031507 Bacteria 19813
127 Ga0307508_10079132 3300031616 Bacteria 2868
128 Ga0316575_10000005 3300031665 Bacteria 88266
129 Ga0316579_10012605 3300031691 Bacteria 3620
130 Ga0316579_10039212 3300031691 Bacteria 2193
131 Ga0265314_10064228 3300031711 Bacteria 2487
132 Ga0265342_10060147 3300031712 Bacteria 2241
133 Ga0316576_10011613 3300031727 Bacteria 5782
134 Ga0316578_10013988 3300031728 Bacteria 4270
135 Ga0316578_10096087 3300031728 Bacteria 1774
136 Ga0307405_10001543 3300031731 Bacteria 9749
137 Ga0316577_10023075 3300031733 Bacteria 3455
138 Ga0307413_10007496 3300031824 Bacteria 5074
139 Ga0307410_10011623 3300031852 Bacteria 5044
140 Ga0307406_10027536 3300031901 Bacteria 3426
141 Ga0307407_10088024 3300031903 Bacteria 1896
142 Ga0307409_100000057 3300031995 Bacteria 40787
143 Ga0307409_100028173 3300031995 Bacteria 3996
144 Ga0307416_100025603 3300032002 Bacteria 4328
145 Ga0307411_10097017 3300032005 Bacteria 2074
146 Ga0307415_100000135 3300032126 Bacteria 32281
147 Ga0307415_100042154 3300032126 Bacteria 3036
148 Ga0307415_100051860 3300032126 Bacteria 2787
149 Ga0316574_0005881 3300035398 Bacteria 6581
150 Ga0316574_0059745 3300035398 Bacteria 2391
151 Ga0373937_0117353 3300036401 Bacteria 2479
152 Ga0316582_0004496 3300036647 Bacteria 7061
153 Ga0316584_0062230 3300036712 Bacteria 2795
154 Ga0316584_0087760 3300036712 Bacteria 2328
155 Ga0395899_0036384 3300037312 Bacteria 3693
156 Ga0395900_0213120 3300037418 Bacteria 1950
157 Ga0395898_0006551 3300037466 Bacteria 12425
158 Ga0395901_0050632 3300038443 Bacteria 4314
159 Ga0395901_0066443 3300038443 Bacteria 3756
160 Ga0395901_0077313 3300038443 Bacteria 3473
161 Ga0395901_0169971 3300038443 Bacteria 2287
162 Ga0400485_12585 3300038735 Bacteria 31012
163 Ga0400486_03470 3300038742 Bacteria 49803
164 Ga0436363_0297631 3300039450 Bacteria 1483
165 Ga0436363_1118939 3300039450 Bacteria 1244
166 Ga0439436_0014129 3300041404 Bacteria 2413
167 Ga0439465_0055911 3300041413 Bacteria 1300
168 Ga0451791_0173987 3300041451 Bacteria 1245
169 Ga0439448_0021940 3300042005 Bacteria 1981
170 Ga0439449_0000867 3300042007 Bacteria 11804
171 Ga0439457_003349 3300042014 Bacteria 4379
172 Ga0466969_0012682 3300044656 Bacteria 4439
173 Ga0466972_0012257 3300044658 Bacteria 4309
174 Ga0466966_0194200 3300044684 Bacteria 1229
175 Ga0466961_0095008 3300044693 Bacteria 1880
176 Ga0466963_0147819 3300044694 Bacteria 1631
177 Ga0466964_0002025 3300044706 Bacteria 7130
178 Ga0466971_0001348 3300044719 Bacteria 10291
179 Ga0466959_0025255 3300045049 Bacteria 4402
180 Ga0466967_0119271 3300045976 Bacteria 2435
181 Ga0466967_0122859 3300045976 Bacteria 2402
182 Ga0466967_0360663 3300045976 Bacteria 1408
183 Ga0495592_0109546 3300046454 Bacteria 1956
184 Ga0495629_0143368 3300046459 Bacteria 1662
185 Ga0495651_0002185 3300046462 Bacteria 15104
186 Ga0495582_0050731 3300046473 Bacteria 2287
187 Ga0495664_0136778 3300046477 Bacteria 1485
188 Ga0495594_0020423 3300046499 Bacteria 3528
189 Ga0495606_0002594 3300046507 Bacteria 20680
190 Ga0495608_0154576 3300046511 Bacteria 1461
191 Ga0495628_0012013 3300046516 Bacteria 7304
192 Ga0495652_0047464 3300046529 Bacteria 3682
193 Ga0495586_0140438 3300046535 Bacteria 1356
194 Ga0495667_0157779 3300046559 Bacteria 1460
195 Ga0495668_0000246 3300046616 Bacteria 77015
196 Ga0495625_0000507 3300046660 Bacteria 57816
197 Ga0495635_0151378 3300046663 Bacteria 1579
198 Ga0495623_0025039 3300046679 Bacteria 3844
199 Ga0495600_0065346 3300046809 Bacteria 2378
200 Ga0495674_0159192 3300047319 Bacteria 1890
201 Ga0495614_0088243 3300048089 Bacteria 1348
202 Ga0495626_0000124 3300048091 Bacteria 99577
203 Ga0496100_0025091 3300048903 Bacteria 3642
204 Ga0496100_0149812 3300048903 Bacteria 1662
205 Ga0496101_0002687 3300048904 Bacteria 10913
206 Ga0496101_0028141 3300048904 Bacteria 3922
207 Ga0496101_0083349 3300048904 Bacteria 2367
208 Ga0496102_0005943 3300048905 Bacteria 10393
209 Ga0496102_0010578 3300048905 Bacteria 7947
210 Ga0496102_0103490 3300048905 Bacteria 2648
211 Ga0496102_0250506 3300048905 Bacteria 1670
212 Ga0496104_0028589 3300048907 Bacteria 5167
213 Ga0496104_0064055 3300048907 Bacteria 3487
214 Ga0496104_0162350 3300048907 Bacteria 2143
215 Ga0496104_0349987 3300048907 Bacteria 1390
216 Ga0496105_0007576 3300048908 Bacteria 8411
217 Ga0496105_0067592 3300048908 Bacteria 2951
218 Ga0496107_0062406 3300048910 Bacteria 2700
219 Ga0496110_0066635 3300048913 Bacteria 3185
220 Ga0496111_0157097 3300048914 Bacteria 1688
221 Ga0496111_0197041 3300048914 Bacteria 1497
222 Ga0496112_0000943 3300048915 Bacteria 21100
223 Ga0496112_0036547 3300048915 Bacteria 4791
224 Ga0496113_0239868 3300048916 Bacteria 1446
225 Ga0496113_0250052 3300048916 Bacteria 1415
226 Ga0496114_0001612 3300048917 Bacteria 17138
227 Ga0496114_0005436 3300048917 Bacteria 9967
228 Ga0496114_0028066 3300048917 Bacteria 4616
229 Ga0496114_0029004 3300048917 Bacteria 4545
230 Ga0496114_0035258 3300048917 Bacteria 4131
231 Ga0496114_0077254 3300048917 Bacteria 2807
232 Ga0496114_0104472 3300048917 Bacteria 2422
233 Ga0496115_0080582 3300048918 Bacteria 2651
234 Ga0496118_0074386 3300048921 Bacteria 2428
235 Ga0496118_0091858 3300048921 Bacteria 2086
236 Ga0496122_0000278 3300048925 Bacteria 114194
237 Ga0496125_0000094 3300048928 Bacteria 208341
238 Ga0501031_0033059 3300049568 Bacteria 3372
239 Ga0501032_0001921 3300049569 Bacteria 16380
240 Ga0501033_0018024 3300049570 Bacteria 5332
241 Ga0501034_0000297 3300049571 Bacteria 88160
242 Ga0501034_0003964 3300049571 Bacteria 16636
243 Ga0501034_0199953 3300049571 Bacteria 1957
244 Ga0501036_0008770 3300049572 Bacteria 8300
245 Ga0501037_0040037 3300049573 Bacteria 3449
246 Ga0501038_0010198 3300049574 Bacteria 8597
247 Ga0501038_0043433 3300049574 Bacteria 3908
248 Ga0501039_0016620 3300049575 Bacteria 5636
249 Ga0501040_0027449 3300049576 Bacteria 3833
250 Ga0501042_0009651 3300049578 Bacteria 6443
251 Ga0501042_0127768 3300049578 Bacteria 1831
252 Ga0501043_0105143 3300049579 Bacteria 2218
253 Ga0501047_0003864 3300049581 Bacteria 14097
254 Ga0501048_0015935 3300049582 Bacteria 5546
255 Ga0501071_0004514 3300049587 Bacteria 8825
256 Ga0501072_0016587 3300049588 Bacteria 5658
257 Ga0501074_0011062 3300049590 Bacteria 6550
258 Ga0501075_0007310 3300049591 Bacteria 7658
259 Ga0501076_0006616 3300049592 Bacteria 8405
260 Ga0501077_0006621 3300049593 Bacteria 7114
261 Ga0501079_0006258 3300049741 Bacteria 8930
262 Ga0501080_0100994 3300049742 Bacteria 2676
263 Ga0501081_0003782 3300049743 Bacteria 9691
264 Ga0501035_0024797 3300049822 Bacteria 5499
265 Ga0501035_0083771 3300049822 Bacteria 2813
266 Ga0501044_0045902 3300049823 Bacteria 4525
267 Ga0501045_0002819 3300049824 Bacteria 11875
268 nmdc:mga05p37_133856_c1 3300050507 Bacteria 3041
269 nmdc:mga0qj67_1544_c1 3300050509 Bacteria 16156
270 nmdc:mga0qj67_235436_c1 3300050509 Bacteria 1486
271 nmdc:mga06r32_174209_c1 3300050510 Bacteria 2136
272 nmdc:mga06r32_4453_c1 3300050510 Bacteria 12540
273 nmdc:mga08y16_2501_c1 3300050511 Bacteria 18897
274 Ga0495612_0002816 3300053078 Bacteria 7191
275 Ga0495619_0052565 3300053085 Bacteria 2693
276 Ga0500646_0008194 3300053090 Bacteria 2673
277 Ga0500608_107025 3300053122 Bacteria 1287
278 Ga0501084_0051475 3300054114 Bacteria 3446
279 Ga0501082_0007303 3300060353 Bacteria 9533
280 Ga0501082_0034400 3300060353 Bacteria 4369
281 Ga0466962_0005355 3300061719 Bacteria 6170
282 Ga0466962_0018458 3300061719 Bacteria 3355
283 Ga0530510_0008057 3300061734 Bacteria 7349
284 2643853292 2643221567 Bacteria 4163945
285 2644137254 2643221624 Bacteria 4384879
286 2644443922 2643221679 Bacteria 3839507
287 2644503435 2643221690 Bacteria 4654705
288 2644525740 2643221694 Bacteria 4392972
289 2644609206 2643221711 Bacteria 4865335
290 2644669810 2643221722 Bacteria 4247614
291 2768647396 2767802112 Bacteria 6465194
292 2808874700 2808606365 Bacteria 4301966
293 2812374335 2811994882 Bacteria 4688362
294 2819427065 2818991318 Bacteria 5266538
295 2819666058 2818991458 Bacteria 4794049
296 2819692465 2818991462 Bacteria 4320267
297 2819728706 2818991469 Bacteria 4644110
298 2848552565 2848551377 Bacteria 3720646
299 2861522350 2861520306 Bacteria 8348283
300 2867347182 2867346516 Bacteria 7608576
301 2887480752 2887478801 Bacteria 8972725
302 2919447014 2919446982 Bacteria 3994487
303 3001891725 3001889506 Bacteria 2975194
304 8001787055 8001781756 Bacteria 9586736
305 8056058800 8056054917 Bacteria 5736694
306 8057572732 8057568493 Bacteria 7221719
307 Ga0395898_0021234
308 Ga0070658_10001130
309 Ga0070658_10079119
310 Ga0070658_10326068
311 Ga0070683_100015109
312 Ga0070683_100050939
313 Ga0070683_100051998
314 Ga0070683_100155232
315 Ga0070670_100088485
316 Ga0068869_100029076
317 Ga0070680_100000500
318 Ga0068868_100109309
319 Ga0070660_100023435
320 Ga0070660_100114229
321 Ga0070660_100183855
322 Ga0070687_100133682
323 Ga0070661_100012074
324 Ga0070675_100007281
325 Ga0070674_100089784
326 Ga0070659_100000246
327 Ga0070659_100003542
328 Ga0070659_100011976
329 Ga0070705_100137431
330 Ga0070700_100050274
331 Ga0070663_100013649
332 Ga0070678_100069101
333 Ga0070681_10001741
334 Ga0070681_10017407
335 Ga0070681_10054247
336 Ga0070679_100000585
337 Ga0070679_100013225
338 Ga0070679_100091103
339 Ga0070679_100178599
340 Ga0070684_100043273
341 Ga0070696_100006150
342 Ga0070665_100186605
343 Ga0070704_100232735
344 Ga0070664_100005880
345 Ga0068857_100033464
346 Ga0068854_100199762
347 Ga0070702_100002594
348 Ga0068852_100005067
349 Ga0068859_100038330
350 Ga0068864_100145967
351 Ga0068863_100089820
352 Ga0068862_100032781
353 Ga0081539_10009704
354 Ga0081539_10013505
355 Ga0081539_10022325
356 Ga0081539_10059496
357 Ga0075430_100002952
358 Ga0075430_100017646
359 Ga0075429_100021782
360 Ga0075429_100027764
361 Ga0097620_100038330
362 Ga0111539_10005761
363 Ga0105245_10023953
364 Ga0105245_10031358
365 Ga0114129_10021772
366 Ga0105243_10053957
367 Ga0105242_10016264
368 Ga0105242_10040095
369 Ga0105248_10104658
370 Ga0105238_10142128
371 Ga0105239_10134022
372 Ga0105239_10498562
373 Ga0157371_10009718
374 Ga0157370_10151657
375 Ga0157369_10000069
376 Ga0157369_10003534
377 Ga0157369_10045168
378 Ga0157369_10097009
379 Ga0157369_10117430
380 Ga0157369_10177402
381 Ga0157378_10053523
382 Ga0163162_10250257
383 Ga0157372_10067111
384 Ga0157375_10019758
385 Ga0157380_10026239
386 Ga0157380_10043030
387 Ga0157380_10091114
388 Ga0157377_10013788
389 Ga0207705_10001536
390 Ga0207705_10203670
391 Ga0207707_10000365
392 Ga0207707_10171757
393 Ga0207671_10115853
394 Ga0207660_10001520
395 Ga0207660_10225872
396 Ga0207657_10073084
397 Ga0207657_10162108
398 Ga0207649_10016968
399 Ga0207652_10000434
400 Ga0207652_10096831
401 Ga0207652_10156954
402 Ga0207652_10274397
403 Ga0207659_10004834
404 Ga0207687_10019128
405 Ga0207690_10000065
406 Ga0207690_10011919
407 Ga0207690_10025650
408 Ga0207686_10102553
409 Ga0207709_10008295
410 Ga0207709_10034063
411 Ga0207709_10181117
412 Ga0207711_10305976
413 Ga0207689_10044504
414 Ga0207661_10003535
415 Ga0207661_10034417
416 Ga0207679_10007509
417 Ga0207640_10116784
418 Ga0207677_10012914
419 Ga0207677_10067633
420 Ga0207678_10041761
421 Ga0207674_10051647
422 Ga0207674_10056802
423 Ga0207683_10017193
424 Ga0268266_10130805
425 Ga0268266_10154123
426 Ga0265334_10004961
427 Ga0307515_10060479
428 Ga0265325_10017410
429 Ga0265340_10004749
430 Ga0307513_10000001
431 Ga0307513_10009763
432 Ga0307509_10004585
433 Ga0307508_10079132
434 Ga0316575_10000005
435 Ga0316579_10012605
436 Ga0316579_10039212
437 Ga0265314_10064228
438 Ga0265342_10060147
439 Ga0316576_10011613
440 Ga0316578_10013988
441 Ga0316578_10096087
442 Ga0307405_10001543
443 Ga0316577_10023075
444 Ga0307413_10007496
445 Ga0307410_10011623
446 Ga0307406_10027536
447 Ga0307407_10088024
448 Ga0307409_100000057
449 Ga0307409_100028173
450 Ga0307416_100025603
451 Ga0307411_10097017
452 Ga0307415_100000135
453 Ga0307415_100042154
454 Ga0307415_100051860
455 Ga0316574_0005881
456 Ga0316574_0059745
457 Ga0373937_0117353
458 Ga0316582_0004496
459 Ga0316584_0062230
460 Ga0316584_0087760
461 Ga0395899_0036384
462 Ga0395900_0213120
463 Ga0395898_0006551
464 Ga0395901_0050632
465 Ga0395901_0066443
466 Ga0395901_0077313
467 Ga0395901_0169971
468 Ga0400485_12585
469 Ga0400486_03470
470 Ga0436363_0297631
471 Ga0436363_1118939
472 Ga0439436_0014129
473 Ga0439465_0055911
474 Ga0451791_0173987
475 Ga0439448_0021940
476 Ga0439449_0000867
477 Ga0439457_003349
478 Ga0466969_0012682
479 Ga0466972_0012257
480 Ga0466966_0194200
481 Ga0466961_0095008
482 Ga0466963_0147819
483 Ga0466964_0002025
484 Ga0466971_0001348
485 Ga0466959_0025255
486 Ga0466967_0119271
487 Ga0466967_0122859
488 Ga0466967_0360663
489 Ga0495592_0109546
490 Ga0495629_0143368
491 Ga0495651_0002185
492 Ga0495582_0050731
493 Ga0495664_0136778
494 Ga0495594_0020423
495 Ga0495606_0002594
496 Ga0495608_0154576
497 Ga0495628_0012013
498 Ga0495652_0047464
499 Ga0495586_0140438
500 Ga0495667_0157779
501 Ga0495668_0000246
502 Ga0495625_0000507
503 Ga0495635_0151378
504 Ga0495623_0025039
505 Ga0495600_0065346
506 Ga0495674_0159192
507 Ga0495614_0088243
508 Ga0495626_0000124
509 Ga0496100_0025091
510 Ga0496100_0149812
511 Ga0496101_0002687
512 Ga0496101_0028141
513 Ga0496101_0083349
514 Ga0496102_0005943
515 Ga0496102_0010578
516 Ga0496102_0103490
517 Ga0496102_0250506
518 Ga0496104_0028589
519 Ga0496104_0064055
520 Ga0496104_0162350
521 Ga0496104_0349987
522 Ga0496105_0007576
523 Ga0496105_0067592
524 Ga0496107_0062406
525 Ga0496110_0066635
526 Ga0496111_0157097
527 Ga0496111_0197041
528 Ga0496112_0000943
529 Ga0496112_0036547
530 Ga0496113_0239868
531 Ga0496113_0250052
532 Ga0496114_0001612
533 Ga0496114_0005436
534 Ga0496114_0028066
535 Ga0496114_0029004
536 Ga0496114_0035258
537 Ga0496114_0077254
538 Ga0496114_0104472
539 Ga0496115_0080582
540 Ga0496118_0074386
541 Ga0496118_0091858
542 Ga0496122_0000278
543 Ga0496125_0000094
544 Ga0501031_0033059
545 Ga0501032_0001921
546 Ga0501033_0018024
547 Ga0501034_0000297
548 Ga0501034_0003964
549 Ga0501034_0199953
550 Ga0501036_0008770
551 Ga0501037_0040037
552 Ga0501038_0010198
553 Ga0501038_0043433
554 Ga0501039_0016620
555 Ga0501040_0027449
556 Ga0501042_0009651
557 Ga0501042_0127768
558 Ga0501043_0105143
559 Ga0501047_0003864
560 Ga0501048_0015935
561 Ga0501071_0004514
562 Ga0501072_0016587
563 Ga0501074_0011062
564 Ga0501075_0007310
565 Ga0501076_0006616
566 Ga0501077_0006621
567 Ga0501079_0006258
568 Ga0501080_0100994
569 Ga0501081_0003782
570 Ga0501035_0024797
571 Ga0501035_0083771
572 Ga0501044_0045902
573 Ga0501045_0002819
574 nmdc:mga05p37_133856_c1
575 nmdc:mga0qj67_1544_c1
576 nmdc:mga0qj67_235436_c1
577 nmdc:mga06r32_174209_c1
578 nmdc:mga06r32_4453_c1
579 nmdc:mga08y16_2501_c1
580 Ga0495612_0002816
581 Ga0495619_0052565
582 Ga0500646_0008194
583 Ga0500608_107025
584 Ga0501084_0051475
585 Ga0501082_0007303
586 Ga0501082_0034400
587 Ga0466962_0005355
588 Ga0466962_0018458
589 Ga0530510_0008057
590 2643853292
591 2644137254
592 2644443922
593 2644503435
594 2644525740
595 2644609206
596 2644669810
597 2768647396
598 2808874700
599 2812374335
600 2819427065
601 2819666058
602 2819692465
603 2819728706
604 2848552565
605 2861522350
606 2867347182
607 2887480752
608 2919447014
609 3001891725
610 8001787055
611 8056058800
612 8057572732

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01207

Dus

Dihydrouridine synthase (Dus)

55

379

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ei9-assembly2.cif.gz_B crystal structure of e. coli trna-dihydrouridine synthase b (dusb) 0.9289 2 326
6ei9-assembly2.cif.gz_B crystal structure of e. coli trna-dihydrouridine synthase b (dusb) 0.8971 2 326
1vhn-assembly1.cif.gz_A crystal structure of a putative flavin oxidoreductase with flavin 0.8967 14 326
1vhn-assembly1.cif.gz_A crystal structure of a putative flavin oxidoreductase with flavin 0.8692 14 326
4yco-assembly2.cif.gz_B e. coli dihydrouridine synthase c (dusc) in complex with trnaphe 0.8415 14 330
ID Description Score Start End Superfamily
af_P9WNS7_19_267_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9639 13 248 3.20.20.70
af_Q9VIS4_253_495_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9505 12 245 3.20.20.70
af_Q9TYN2_201_445_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.939 11 245 3.20.20.70
af_P0ABT5_6_247_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9365 10 252 3.20.20.70
af_P0ABT5_6_247_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9254 10 252 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A7X7QEH7-F1-model_v4 tRNA dihydrouridine synthase DusB 0.9733 2 250 GO:0003723
GO:0017150
GO:0050660
AF-A0A1R4K4S7-F1-model_v4 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.9729 2 329 GO:0003723
GO:0017150
GO:0050660
AF-A0A7V8X0C7-F1-model_v4 tRNA-dihydrouridine synthase 0.968 2 233 GO:0003723
GO:0017150
GO:0050660
AF-A0A6B3GNX9-F1-model_v4 tRNA dihydrouridine synthase DusB 0.9664 143 313 GO:0003723
GO:0017150
AF-A0A7V9GHM5-F1-model_v4 tRNA dihydrouridine synthase DusB 0.9643 2 273 GO:0003723
GO:0017150
GO:0050660

Map