F398418

General Info

Members Datasets Scaffolds Average Seq Length
305 190 610 184

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2997600082|2997602966
Length 219
Sequence YYSDLAVRLVNSEEPVRGTDALTSVEAVRTLFGESKQAARRATDADVTRLRAVRARLRAVFEAAAEGDEVRAVDLLNALLIEFPVSPQISGHETRDEDGRPHWHMHIADYAANAGAGFAATASMGLAFHLTELGADRLGICEASPCRNAYLDTSTNRSRRYCSDRCATRANVAAYRARKRLDAERSAAAERGPRAPREDRDRTGRTADAAHDSSPAMER

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013059 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
43 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
65 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
66 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
67 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
70 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
73 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
74 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
75 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
76 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
82 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
83 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
84 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
85 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
86 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
87 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
88 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
94 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
98 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
99 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
100 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
101 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
102 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
103 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
104 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
112 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
113 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
152 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
153 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
154 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
155 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
156 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
159 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
160 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
161 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
162 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
163 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
164 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
165 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
172 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
173 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
174 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
175 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
176 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
177 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
178 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
179 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
180 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
181 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
182 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
183 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
184 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
185 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
186 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
187 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
188 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
189 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
190 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.21
Metatranscriptomes 6.56
Isolates 6.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.33
Nodule 0
Rhizoplane 4.26
Rhizosphere 70.49
Stem 0
Stem Tuber 0
Unclassified 0.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10084565 3300003320 Bacteria 2379
2 rootL2_10218719 3300003322 Bacteria 1190
3 JGI25160J50197_1023521 3300003354 Bacteria 1774
4 JGI25160J50197_1028327 3300003354 Bacteria 1505
5 Ga0070680_100375013 3300005336 Bacteria 1211
6 Ga0070682_100859326 3300005337 Bacteria 742
7 Ga0070668_100701601 3300005347 Bacteria 893
8 Ga0070688_100608864 3300005365 Bacteria 837
9 Ga0070659_100530934 3300005366 Bacteria 1006
10 Ga0070714_100005386 3300005435 Bacteria 9765
11 Ga0070714_100018329 3300005435 Bacteria 5685
12 Ga0070714_100321620 3300005435 Bacteria 1447
13 Ga0070713_100061545 3300005436 Bacteria 3140
14 Ga0070710_10449884 3300005437 Bacteria 873
15 Ga0070663_100119541 3300005455 Bacteria 1989
16 Ga0070678_100663353 3300005456 Bacteria 937
17 Ga0070685_10250920 3300005466 Bacteria 1172
18 Ga0070685_10408981 3300005466 Bacteria 941
19 Ga0070679_100846640 3300005530 Bacteria 858
20 Ga0070672_100122236 3300005543 Bacteria 2132
21 Ga0070665_100907086 3300005548 Bacteria 894
22 Ga0068855_100863387 3300005563 Bacteria 958
23 Ga0070664_100295053 3300005564 Bacteria 1464
24 Ga0068857_101625479 3300005577 Bacteria 631
25 Ga0068856_101150331 3300005614 Bacteria 793
26 Ga0070702_100066772 3300005615 Bacteria 2111
27 Ga0068864_100963577 3300005618 Bacteria 845
28 Ga0068860_100001392 3300005843 Bacteria 26214
29 Ga0081455_10193437 3300005937 Bacteria 1530
30 Ga0070717_10103636 3300006028 Bacteria 2419
31 Ga0075365_10037961 3300006038 Bacteria 3128
32 Ga0075365_10040878 3300006038 Bacteria 3026
33 Ga0075365_10057066 3300006038 Bacteria 2597
34 Ga0075365_10120530 3300006038 Bacteria 1809
35 Ga0075365_10247009 3300006038 Bacteria 1254
36 Ga0075365_10251196 3300006038 Bacteria 1243
37 Ga0075365_10291364 3300006038 Bacteria 1148
38 Ga0075365_10310739 3300006038 Bacteria 1110
39 Ga0075365_10330808 3300006038 Bacteria 1073
40 Ga0075365_10400879 3300006038 Bacteria 968
41 Ga0075365_10534075 3300006038 Bacteria 829
42 Ga0075368_10000990 3300006042 Bacteria 8887
43 Ga0075363_100001385 3300006048 Bacteria 9139
44 Ga0075363_100120738 3300006048 Bacteria 1463
45 Ga0075363_100173873 3300006048 Bacteria 1223
46 Ga0075363_100175326 3300006048 Bacteria 1218
47 Ga0075364_10006667 3300006051 Bacteria 6807
48 Ga0075364_10219748 3300006051 Bacteria 1289
49 Ga0075367_10003044 3300006178 Bacteria 7855
50 Ga0075367_10014092 3300006178 Bacteria 4319
51 Ga0075367_10043073 3300006178 Bacteria 2644
52 Ga0075367_10470652 3300006178 Bacteria 797
53 Ga0075370_10025759 3300006353 Bacteria 3254
54 Ga0075370_10348420 3300006353 Bacteria 885
55 Ga0068871_101029547 3300006358 Bacteria 768
56 Ga0105243_10097994 3300009148 Bacteria 2428
57 Ga0105243_11865311 3300009148 Bacteria 633
58 Ga0105248_11061515 3300009177 Bacteria 915
59 Ga0105238_10741915 3300009551 Bacteria 995
60 Ga0105246_10127295 3300011119 Bacteria 1897
61 Ga0105246_10591299 3300011119 Bacteria 957
62 Ga0105246_11486957 3300011119 Bacteria 635
63 Ga0154012_174795 3300013059 Bacteria 719
64 Ga0157372_10260974 3300013307 Bacteria 2012
65 Ga0157372_10886151 3300013307 Bacteria 1035
66 Ga0157380_12314054 3300014326 Bacteria 602
67 Ga0157376_11273391 3300014969 Bacteria 765
68 Ga0163161_10059768 3300017792 Bacteria 2772
69 Ga0197907_10894535 3300020069 Bacteria 662
70 Ga0197907_11163380 3300020069 Bacteria 3466
71 Ga0197907_11439189 3300020069 Bacteria 697
72 Ga0206356_11385541 3300020070 Bacteria 775
73 Ga0206349_1348824 3300020075 Bacteria 986
74 Ga0206349_1362013 3300020075 Bacteria 610
75 Ga0206351_10274107 3300020077 Bacteria 654
76 Ga0206352_10437850 3300020078 Bacteria 1497
77 Ga0206350_10747649 3300020080 Bacteria 775
78 Ga0206350_11550607 3300020080 Bacteria 893
79 Ga0206354_10016150 3300020081 Bacteria 636
80 Ga0206354_10141427 3300020081 Bacteria 1077
81 Ga0206354_10168879 3300020081 Bacteria 844
82 Ga0206353_10634567 3300020082 Bacteria 864
83 Ga0206353_11102985 3300020082 Bacteria 1010
84 Ga0206353_11252246 3300020082 Bacteria 3971
85 Ga0224712_10002382 3300022467 Bacteria 4626
86 Ga0224712_10042404 3300022467 Bacteria 1724
87 Ga0224712_10299135 3300022467 Bacteria 752
88 Ga0207426_1001800 3300025302 Bacteria 16005
89 Ga0207426_1003130 3300025302 Bacteria 9429
90 Ga0207426_1005965 3300025302 Bacteria 5405
91 Ga0207660_10274588 3300025917 Bacteria 1336
92 Ga0207694_10803208 3300025924 Bacteria 795
93 Ga0207659_10201199 3300025926 Bacteria 1591
94 Ga0207700_10228378 3300025928 Bacteria 1581
95 Ga0207664_10007418 3300025929 Bacteria 7604
96 Ga0207664_10042482 3300025929 Bacteria 3549
97 Ga0207664_10488371 3300025929 Bacteria 1102
98 Ga0207664_10947218 3300025929 Bacteria 772
99 Ga0207690_10395065 3300025932 Bacteria 1102
100 Ga0207691_10113222 3300025940 Bacteria 2411
101 Ga0207658_10101335 3300025986 Bacteria 2256
102 Ga0207675_100050094 3300026118 Bacteria 3897
103 Ga0209813_10005211 3300027866 Bacteria 3144
104 Ga0268264_10000560 3300028381 Bacteria 45822
105 Ga0307509_10103214 3300031507 Bacteria 2880
106 Ga0307508_10003101 3300031616 Bacteria 17063
107 Ga0307516_10046997 3300031730 Bacteria 4256
108 Ga0307507_10000020 3300033179 Bacteria 220880
109 Ga0466969_0002779 3300044656 Bacteria 9358
110 Ga0466969_0003943 3300044656 Bacteria 7878
111 Ga0466969_0055833 3300044656 Bacteria 1930
112 Ga0466972_0157889 3300044658 Bacteria 1066
113 Ga0466965_0191698 3300044683 Bacteria 1081
114 Ga0466966_0017589 3300044684 Bacteria 4723
115 Ga0466966_0027573 3300044684 Bacteria 3703
116 Ga0466966_0286762 3300044684 Bacteria 990
117 Ga0466961_0000215 3300044693 Bacteria 38990
118 Ga0466961_0016526 3300044693 Bacteria 4741
119 Ga0466961_0149158 3300044693 Bacteria 1461
120 Ga0466961_0184433 3300044693 Bacteria 1295
121 Ga0466963_0323451 3300044694 Bacteria 1085
122 Ga0466971_0000053 3300044719 Bacteria 44476
123 Ga0466971_0000895 3300044719 Bacteria 12201
124 Ga0466971_0001960 3300044719 Bacteria 8714
125 Ga0466971_0095481 3300044719 Bacteria 1363
126 Ga0466968_0181698 3300044735 Archaea 978
127 Ga0466970_0035521 3300044765 Bacteria 2640
128 Ga0466970_0135543 3300044765 Bacteria 1354
129 Ga0466959_0000672 3300045049 Bacteria 19951
130 Ga0466959_0002842 3300045049 Bacteria 11156
131 Ga0466959_0003372 3300045049 Bacteria 10436
132 Ga0466959_0080003 3300045049 Bacteria 2356
133 Ga0466958_0054284 3300045836 Bacteria 2430
134 Ga0466958_0185669 3300045836 Unclassified 1320
135 Ga0466967_0681988 3300045976 Bacteria 1017
136 Ga0466967_0878246 3300045976 Bacteria 891
137 Ga0495629_0639979 3300046459 Bacteria 709
138 Ga0495651_0000320 3300046462 Bacteria 37248
139 Ga0495651_0006917 3300046462 Bacteria 8669
140 Ga0495653_0029351 3300046463 Bacteria 4391
141 Ga0495580_0559773 3300046472 Bacteria 758
142 Ga0495662_0140773 3300046476 Bacteria 1187
143 Ga0495662_0197145 3300046476 Bacteria 992
144 Ga0495664_0012334 3300046477 Bacteria 4839
145 Ga0495664_0019668 3300046477 Bacteria 3886
146 Ga0495585_0007633 3300046492 Bacteria 6610
147 Ga0495585_0028092 3300046492 Bacteria 3210
148 Ga0495608_0001452 3300046511 Bacteria 16837
149 Ga0495618_0034155 3300046514 Bacteria 3189
150 Ga0495628_0003783 3300046516 Bacteria 13468
151 Ga0495628_0017905 3300046516 Bacteria 5880
152 Ga0495630_0219155 3300046517 Bacteria 1452
153 Ga0495630_0599735 3300046517 Bacteria 844
154 Ga0495666_0004924 3300046526 Bacteria 6759
155 Ga0495652_0323750 3300046529 Bacteria 1113
156 Ga0495665_0085263 3300046531 Bacteria 1660
157 Ga0495640_0036297 3300046533 Bacteria 3482
158 Ga0495640_0052439 3300046533 Bacteria 2801
159 Ga0495587_0072424 3300046536 Bacteria 2003
160 Ga0495645_0010151 3300046543 Bacteria 6597
161 Ga0495645_0058877 3300046543 Bacteria 2786
162 Ga0495667_0013623 3300046559 Bacteria 5498
163 Ga0495634_0053485 3300046642 Bacteria 2704
164 Ga0495635_0510710 3300046663 Bacteria 790
165 Ga0495657_0016980 3300046675 Bacteria 5290
166 Ga0495599_0151744 3300046678 Bacteria 1434
167 Ga0495623_0030133 3300046679 Bacteria 3491
168 Ga0495623_0078009 3300046679 Bacteria 2053
169 Ga0495646_0092217 3300046680 Bacteria 1747
170 Ga0495589_0030768 3300046794 Bacteria 2703
171 Ga0495600_0013389 3300046809 Bacteria 5153
172 Ga0495600_0168830 3300046809 Bacteria 1412
173 Ga0495581_0024172 3300047315 Bacteria 3521
174 Ga0495604_0004434 3300047317 Bacteria 11118
175 Ga0495604_0004927 3300047317 Bacteria 10585
176 Ga0495674_0064192 3300047319 Bacteria 3192
177 Ga0495687_131771 3300047443 Bacteria 883
178 Ga0495675_0012012 3300047444 Bacteria 5443
179 Ga0495675_0024653 3300047444 Bacteria 3836
180 Ga0495675_0027195 3300047444 Bacteria 3645
181 Ga0495685_000687 3300047447 Bacteria 10339
182 Ga0495685_099742 3300047447 Bacteria 959
183 Ga0495593_0044419 3300047673 Bacteria 2377
184 Ga0495593_0129109 3300047673 Bacteria 1284
185 Ga0495602_0603589 3300048088 Bacteria 754
186 Ga0496101_0220540 3300048904 Bacteria 1472
187 Ga0496101_0772974 3300048904 Bacteria 758
188 Ga0496104_0244739 3300048907 Bacteria 1706
189 Ga0496106_0706597 3300048909 Bacteria 803
190 Ga0496108_0445114 3300048911 Bacteria 1132
191 Ga0496109_0127759 3300048912 Bacteria 2371
192 Ga0496109_0817506 3300048912 Bacteria 870
193 Ga0496110_0061572 3300048913 Bacteria 3313
194 Ga0496110_1036514 3300048913 Bacteria 728
195 Ga0496111_0493898 3300048914 Bacteria 901
196 Ga0496114_0627841 3300048917 Bacteria 946
197 Ga0496115_0131978 3300048918 Bacteria 2059
198 Ga0501031_0039507 3300049568 Bacteria 3079
199 Ga0501032_0013990 3300049569 Bacteria 5692
200 Ga0501032_0174534 3300049569 Bacteria 1408
201 Ga0501033_0142336 3300049570 Bacteria 1733
202 Ga0501033_0191486 3300049570 Bacteria 1463
203 Ga0501033_0453182 3300049570 Bacteria 891
204 Ga0501034_0016171 3300049571 Bacteria 7653
205 Ga0501034_0332486 3300049571 Bacteria 1451
206 Ga0501036_0018367 3300049572 Bacteria 5857
207 Ga0501037_0395483 3300049573 Bacteria 948
208 Ga0501037_0622811 3300049573 Bacteria 723
209 Ga0501038_0023099 3300049574 Bacteria 5564
210 Ga0501038_0024417 3300049574 Bacteria 5394
211 Ga0501038_0418985 3300049574 Bacteria 1034
212 Ga0501039_0031684 3300049575 Bacteria 4077
213 Ga0501039_0164470 3300049575 Bacteria 1744
214 Ga0501040_0004044 3300049576 Bacteria 9534
215 Ga0501040_0342262 3300049576 Bacteria 1071
216 Ga0501042_0002756 3300049578 Bacteria 10848
217 Ga0501042_0450131 3300049578 Bacteria 934
218 Ga0501043_0023804 3300049579 Bacteria 4804
219 Ga0501047_0103719 3300049581 Bacteria 2724
220 Ga0501047_0238399 3300049581 Bacteria 1670
221 Ga0501048_0227050 3300049582 Bacteria 1325
222 Ga0501068_0330048 3300049584 Bacteria 979
223 Ga0501068_0435759 3300049584 Bacteria 847
224 Ga0501069_0250513 3300049585 Bacteria 1033
225 Ga0501070_0008984 3300049586 Bacteria 8454
226 Ga0501070_0115739 3300049586 Bacteria 2214
227 Ga0501071_0007246 3300049587 Bacteria 7261
228 Ga0501072_0125057 3300049588 Bacteria 2048
229 Ga0501072_0309271 3300049588 Bacteria 1256
230 Ga0501073_0441374 3300049589 Bacteria 900
231 Ga0501073_0451969 3300049589 Bacteria 888
232 Ga0501074_0095506 3300049590 Bacteria 2129
233 Ga0501075_0029512 3300049591 Bacteria 4057
234 Ga0501076_0073718 3300049592 Bacteria 2733
235 Ga0501079_0147162 3300049741 Bacteria 1836
236 Ga0501079_0255472 3300049741 Bacteria 1370
237 Ga0501080_0027314 3300049742 Bacteria 5307
238 Ga0501081_0047768 3300049743 Bacteria 2945
239 Ga0501083_0011243 3300049744 Bacteria 6281
240 Ga0501035_0072594 3300049822 Bacteria 3045
241 Ga0501035_0127621 3300049822 Bacteria 2220
242 Ga0501035_0277007 3300049822 Bacteria 1419
243 Ga0501035_0281814 3300049822 Bacteria 1404
244 Ga0501044_0344188 3300049823 Bacteria 1412
245 Ga0501044_0347062 3300049823 Bacteria 1404
246 Ga0501045_0020402 3300049824 Bacteria 4733
247 nmdc:mga03n38_142346_c1 3300050490 Bacteria 1199
248 nmdc:mga03n38_148734_c1 3300050490 Bacteria 1177
249 nmdc:mga03n38_158323_c1 3300050490 Bacteria 1145
250 nmdc:mga03n38_376436_c1 3300050490 Bacteria 777
251 nmdc:mga03n38_46763_c1 3300050490 Bacteria 1912
252 nmdc:mga00v17_103383_c1 3300050491 Bacteria 1800
253 nmdc:mga00v17_12478_c1 3300050491 Bacteria 4691
254 nmdc:mga00v17_25484_c1 3300050491 Bacteria 3438
255 nmdc:mga00v17_367635_c1 3300050491 Bacteria 935
256 nmdc:mga00v17_80066_c1 3300050491 Bacteria 2038
257 nmdc:mga0yw44_11042_c1 3300050492 Bacteria 4640
258 nmdc:mga0yw44_140389_c1 3300050492 Bacteria 1570
259 nmdc:mga0yw44_15949_c1 3300050492 Bacteria 4043
260 nmdc:mga0yw44_161534_c1 3300050492 Bacteria 1467
261 nmdc:mga0yw44_260056_c1 3300050492 Bacteria 1157
262 nmdc:mga0yw44_269659_c1 3300050492 Bacteria 1136
263 nmdc:mga0yw44_479202_c1 3300050492 Bacteria 844
264 nmdc:mga0yw44_563736_c1 3300050492 Bacteria 773
265 nmdc:mga0yw44_807730_c1 3300050492 Bacteria 637
266 nmdc:mga0yw44_9192_c1 3300050492 Bacteria 4974
267 nmdc:mga06z11_37865_c1 3300050494 Bacteria 2391
268 nmdc:mga06z11_8498_c1 3300050494 Bacteria 4287
269 nmdc:mga04h51_33805_c1 3300050495 Bacteria 1630
270 nmdc:mga07m45_42131_c1 3300050496 Bacteria 2559
271 nmdc:mga0sz30_334535_c1 3300050516 Bacteria 676
272 Ga0495601_0041404 3300053077 Bacteria 2887
273 Ga0495601_0584294 3300053077 Bacteria 717
274 Ga0495619_0713772 3300053085 Bacteria 681
275 Ga0500644_0035778 3300053088 Bacteria 1611
276 Ga0500554_040578 3300053102 Bacteria 1427
277 Ga0500560_049182 3300053107 Bacteria 1348
278 Ga0500621_146836 3300053126 Bacteria 889
279 Ga0500573_0061049 3300053140 Bacteria 2159
280 Ga0500616_0010399 3300053153 Bacteria 5570
281 Ga0500636_0111180 3300053177 Bacteria 1548
282 Ga0501084_0025507 3300054114 Bacteria 4931
283 Ga0501084_0320783 3300054114 Bacteria 1309
284 Ga0501082_0049327 3300060353 Bacteria 3630
285 Ga0466962_0010972 3300061719 Bacteria 4360
286 Ga0530510_0399466 3300061734 Bacteria 1036
287 2997602966 2997600082 Bacteria 9896405
288 2644017602 2643221601 Bacteria 7493239
289 2644173438 2643221631 Bacteria 8168043
290 2793977252 2791355406 Bacteria 11364898
291 2819740706 2818991472 Bacteria 10089953
292 2857485600 2857481737 Bacteria 4761446
293 2990091535 2990088156 Bacteria 6657676
294 2995467213 2995463766 Bacteria 8577691
295 3006430003 3006425503 Bacteria 6491253
296 8025482083 8025478263 Bacteria 8209203
297 8033688628 8033684223 Bacteria 6906479
298 8047896231 8047893842 Bacteria 11723082
299 8048135040 8048127548 Bacteria 11053136
300 8048362705 8048356638 Bacteria 11044339
301 8048373240 8048369669 Bacteria 11666822
302 8048385002 8048379754 Bacteria 11877923
303 8054161100 8054160619 Bacteria 7783213
304 8056449092 8056447290 Bacteria 7680491
305 8056671560 8056667051 Bacteria 6953971
306 rootH2_10084565
307 rootL2_10218719
308 JGI25160J50197_1023521
309 JGI25160J50197_1028327
310 Ga0070680_100375013
311 Ga0070682_100859326
312 Ga0070668_100701601
313 Ga0070688_100608864
314 Ga0070659_100530934
315 Ga0070714_100005386
316 Ga0070714_100018329
317 Ga0070714_100321620
318 Ga0070713_100061545
319 Ga0070710_10449884
320 Ga0070663_100119541
321 Ga0070678_100663353
322 Ga0070685_10250920
323 Ga0070685_10408981
324 Ga0070679_100846640
325 Ga0070672_100122236
326 Ga0070665_100907086
327 Ga0068855_100863387
328 Ga0070664_100295053
329 Ga0068857_101625479
330 Ga0068856_101150331
331 Ga0070702_100066772
332 Ga0068864_100963577
333 Ga0068860_100001392
334 Ga0081455_10193437
335 Ga0070717_10103636
336 Ga0075365_10037961
337 Ga0075365_10040878
338 Ga0075365_10057066
339 Ga0075365_10120530
340 Ga0075365_10247009
341 Ga0075365_10251196
342 Ga0075365_10291364
343 Ga0075365_10310739
344 Ga0075365_10330808
345 Ga0075365_10400879
346 Ga0075365_10534075
347 Ga0075368_10000990
348 Ga0075363_100001385
349 Ga0075363_100120738
350 Ga0075363_100173873
351 Ga0075363_100175326
352 Ga0075364_10006667
353 Ga0075364_10219748
354 Ga0075367_10003044
355 Ga0075367_10014092
356 Ga0075367_10043073
357 Ga0075367_10470652
358 Ga0075370_10025759
359 Ga0075370_10348420
360 Ga0068871_101029547
361 Ga0105243_10097994
362 Ga0105243_11865311
363 Ga0105248_11061515
364 Ga0105238_10741915
365 Ga0105246_10127295
366 Ga0105246_10591299
367 Ga0105246_11486957
368 Ga0154012_174795
369 Ga0157372_10260974
370 Ga0157372_10886151
371 Ga0157380_12314054
372 Ga0157376_11273391
373 Ga0163161_10059768
374 Ga0197907_10894535
375 Ga0197907_11163380
376 Ga0197907_11439189
377 Ga0206356_11385541
378 Ga0206349_1348824
379 Ga0206349_1362013
380 Ga0206351_10274107
381 Ga0206352_10437850
382 Ga0206350_10747649
383 Ga0206350_11550607
384 Ga0206354_10016150
385 Ga0206354_10141427
386 Ga0206354_10168879
387 Ga0206353_10634567
388 Ga0206353_11102985
389 Ga0206353_11252246
390 Ga0224712_10002382
391 Ga0224712_10042404
392 Ga0224712_10299135
393 Ga0207426_1001800
394 Ga0207426_1003130
395 Ga0207426_1005965
396 Ga0207660_10274588
397 Ga0207694_10803208
398 Ga0207659_10201199
399 Ga0207700_10228378
400 Ga0207664_10007418
401 Ga0207664_10042482
402 Ga0207664_10488371
403 Ga0207664_10947218
404 Ga0207690_10395065
405 Ga0207691_10113222
406 Ga0207658_10101335
407 Ga0207675_100050094
408 Ga0209813_10005211
409 Ga0268264_10000560
410 Ga0307509_10103214
411 Ga0307508_10003101
412 Ga0307516_10046997
413 Ga0307507_10000020
414 Ga0466969_0002779
415 Ga0466969_0003943
416 Ga0466969_0055833
417 Ga0466972_0157889
418 Ga0466965_0191698
419 Ga0466966_0017589
420 Ga0466966_0027573
421 Ga0466966_0286762
422 Ga0466961_0000215
423 Ga0466961_0016526
424 Ga0466961_0149158
425 Ga0466961_0184433
426 Ga0466963_0323451
427 Ga0466971_0000053
428 Ga0466971_0000895
429 Ga0466971_0001960
430 Ga0466971_0095481
431 Ga0466968_0181698
432 Ga0466970_0035521
433 Ga0466970_0135543
434 Ga0466959_0000672
435 Ga0466959_0002842
436 Ga0466959_0003372
437 Ga0466959_0080003
438 Ga0466958_0054284
439 Ga0466958_0185669
440 Ga0466967_0681988
441 Ga0466967_0878246
442 Ga0495629_0639979
443 Ga0495651_0000320
444 Ga0495651_0006917
445 Ga0495653_0029351
446 Ga0495580_0559773
447 Ga0495662_0140773
448 Ga0495662_0197145
449 Ga0495664_0012334
450 Ga0495664_0019668
451 Ga0495585_0007633
452 Ga0495585_0028092
453 Ga0495608_0001452
454 Ga0495618_0034155
455 Ga0495628_0003783
456 Ga0495628_0017905
457 Ga0495630_0219155
458 Ga0495630_0599735
459 Ga0495666_0004924
460 Ga0495652_0323750
461 Ga0495665_0085263
462 Ga0495640_0036297
463 Ga0495640_0052439
464 Ga0495587_0072424
465 Ga0495645_0010151
466 Ga0495645_0058877
467 Ga0495667_0013623
468 Ga0495634_0053485
469 Ga0495635_0510710
470 Ga0495657_0016980
471 Ga0495599_0151744
472 Ga0495623_0030133
473 Ga0495623_0078009
474 Ga0495646_0092217
475 Ga0495589_0030768
476 Ga0495600_0013389
477 Ga0495600_0168830
478 Ga0495581_0024172
479 Ga0495604_0004434
480 Ga0495604_0004927
481 Ga0495674_0064192
482 Ga0495687_131771
483 Ga0495675_0012012
484 Ga0495675_0024653
485 Ga0495675_0027195
486 Ga0495685_000687
487 Ga0495685_099742
488 Ga0495593_0044419
489 Ga0495593_0129109
490 Ga0495602_0603589
491 Ga0496101_0220540
492 Ga0496101_0772974
493 Ga0496104_0244739
494 Ga0496106_0706597
495 Ga0496108_0445114
496 Ga0496109_0127759
497 Ga0496109_0817506
498 Ga0496110_0061572
499 Ga0496110_1036514
500 Ga0496111_0493898
501 Ga0496114_0627841
502 Ga0496115_0131978
503 Ga0501031_0039507
504 Ga0501032_0013990
505 Ga0501032_0174534
506 Ga0501033_0142336
507 Ga0501033_0191486
508 Ga0501033_0453182
509 Ga0501034_0016171
510 Ga0501034_0332486
511 Ga0501036_0018367
512 Ga0501037_0395483
513 Ga0501037_0622811
514 Ga0501038_0023099
515 Ga0501038_0024417
516 Ga0501038_0418985
517 Ga0501039_0031684
518 Ga0501039_0164470
519 Ga0501040_0004044
520 Ga0501040_0342262
521 Ga0501042_0002756
522 Ga0501042_0450131
523 Ga0501043_0023804
524 Ga0501047_0103719
525 Ga0501047_0238399
526 Ga0501048_0227050
527 Ga0501068_0330048
528 Ga0501068_0435759
529 Ga0501069_0250513
530 Ga0501070_0008984
531 Ga0501070_0115739
532 Ga0501071_0007246
533 Ga0501072_0125057
534 Ga0501072_0309271
535 Ga0501073_0441374
536 Ga0501073_0451969
537 Ga0501074_0095506
538 Ga0501075_0029512
539 Ga0501076_0073718
540 Ga0501079_0147162
541 Ga0501079_0255472
542 Ga0501080_0027314
543 Ga0501081_0047768
544 Ga0501083_0011243
545 Ga0501035_0072594
546 Ga0501035_0127621
547 Ga0501035_0277007
548 Ga0501035_0281814
549 Ga0501044_0344188
550 Ga0501044_0347062
551 Ga0501045_0020402
552 nmdc:mga03n38_142346_c1
553 nmdc:mga03n38_148734_c1
554 nmdc:mga03n38_158323_c1
555 nmdc:mga03n38_376436_c1
556 nmdc:mga03n38_46763_c1
557 nmdc:mga00v17_103383_c1
558 nmdc:mga00v17_12478_c1
559 nmdc:mga00v17_25484_c1
560 nmdc:mga00v17_367635_c1
561 nmdc:mga00v17_80066_c1
562 nmdc:mga0yw44_11042_c1
563 nmdc:mga0yw44_140389_c1
564 nmdc:mga0yw44_15949_c1
565 nmdc:mga0yw44_161534_c1
566 nmdc:mga0yw44_260056_c1
567 nmdc:mga0yw44_269659_c1
568 nmdc:mga0yw44_479202_c1
569 nmdc:mga0yw44_563736_c1
570 nmdc:mga0yw44_807730_c1
571 nmdc:mga0yw44_9192_c1
572 nmdc:mga06z11_37865_c1
573 nmdc:mga06z11_8498_c1
574 nmdc:mga04h51_33805_c1
575 nmdc:mga07m45_42131_c1
576 nmdc:mga0sz30_334535_c1
577 Ga0495601_0041404
578 Ga0495601_0584294
579 Ga0495619_0713772
580 Ga0500644_0035778
581 Ga0500554_040578
582 Ga0500560_049182
583 Ga0500621_146836
584 Ga0500573_0061049
585 Ga0500616_0010399
586 Ga0500636_0111180
587 Ga0501084_0025507
588 Ga0501084_0320783
589 Ga0501082_0049327
590 Ga0466962_0010972
591 Ga0530510_0399466
592 2997602966
593 2644017602
594 2644173438
595 2793977252
596 2819740706
597 2857485600
598 2990091535
599 2995467213
600 3006430003
601 8025482083
602 8033688628
603 8047896231
604 8048135040
605 8048362705
606 8048373240
607 8048385002
608 8054161100
609 8056449092
610 8056671560

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11706

zf-CGNR

CGNR zinc finger

137

179

0.98

PF07336

ABATE

Putative stress-induced transcription regulator

3

133

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3h0n-assembly1.cif.gz_A-2 crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 a resolution 0.8412 1 173
3h0n-assembly1.cif.gz_A-2 crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 a resolution 0.792 1 173
2ykr-assembly1.cif.gz_T 30s ribosomal subunit with rsga bound in the presence of gmppnp 0.7001 30 85
5yvv-assembly1.cif.gz_B crystal structure of full length ns3 protein (gd4ns2bns3) from denv4 in closed conformation 0.4953 86 122
2vbc-assembly1.cif.gz_A crystal structure of the ns3 protease-helicase from dengue virus 0.4878 88 121
ID Description Score Start End Superfamily
3h0nA00 Mainly Alpha;Orthogonal Bundle;Jann2411-like fold;Jann2411-like domain 0.8358 1 173 1.10.3300.10
3h0nA00 Mainly Alpha;Orthogonal Bundle;Jann2411-like fold;Jann2411-like domain 0.7947 1 173 1.10.3300.10
af_P0A8W0_121_258_1.20.120.530 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);GntR ligand-binding domain-like 0.4888 3 84 1.20.120.530
af_P71741_292_669_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.4874 55 130 1.50.10.10
2jlvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.454 88 122 3.40.50.300
ID Description Score Start End GO Terms
AF-C7QCR5-F1-model_v4 Zinc finger CGNR domain-containing protein 0.9558 1 188
AF-A0A0A0NG73-F1-model_v4 Zinc finger CGNR domain-containing protein 0.9434 1 186
AF-C7QCR5-F1-model_v4 Zinc finger CGNR domain-containing protein 0.941 1 188
AF-A0A7W3T4P3-F1-model_v4 Zf-CGNR multi-domain protein 0.9395 1 181
AF-A0A1C4YE72-F1-model_v4 CGNR zinc finger domain-containing protein 0.9386 1 179

Map