F398379

General Info

Members Datasets Scaffolds Average Seq Length
305 160 610 1153

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0002213|Ga0500616_0002213_3201_7304
Length 1267
Sequence MADDTSIPQTQGTQAHGALPPLAAPPLVDAEARELIRSALDETLAVEAAAGTGKTTVLVDRIVNALAQGKTTVDRLVAVTFTEKAAGELKLRLRARLDVERQRTDDDAVWRHLDAALANLEQAHVSTIHGFCADLLRERPVEARVDPQFTTLTEGQAERLYGDVFRDWLQRQLEDPPEGVRRALRRPSFDADNGPIKRLQRAGWTLVEWRDFQAPWRRDPFARDPQIDALVQELERFAALTDAPGDRRDPLFENTRDARRLFQDLTLAERVRPRDYDGLEAQFVRLLTWRFKNISYGRKTSPYRKGVPRTDVIDAHQRFVASLDAFQRAADADLAALLQEELRETVDRYLTAKTRLGALDFLDLLILARDLVRNHQDVRAAFQARFTHLFVDEFQDTDPLQAELLLLLAADDARDEDWRTVTPSRGKLFVVGDPKQSIYRFRRADVGIYRDVRDQLKRQGARLLTLTTSFRSAPAIQRFVNAGFAPRMRGDATSLQAEYVPLSPVREDAPGQPAVVALSIPRPFGTYGRVRKESIIASLPDAVGAFVHWLIAQSGWTVTERDGGERRVPVQARHVCLLFRRVDTRDWATGGMVDMTRPYVQALESRGIPHVLVGGKSFHEREEVETLRTALAAVEWPDDELSVFGTLRGAFFAIDDESLFAFRQRVGRLQPFQRPSAPEAEAQTDARAERFKPIVEALDILRELHVRRNYRPVAETIARLLDASRAHVAFALRPSGEQALANVLYIAELARQYEACGGISFRGFVDQLRDEAASTRSAEAPILEEGSDGVRIMTVHKAKGLEFPIVILADTTAELSRRTASRWVDAAGGRCAVSLAGWTPADLRDHEAEEVARDEAEGVRVAYVAATRARDLLVVPAVGDEPQGGWVSPVAEALYPELDVRRDAASAPGCPPFGKDSVLDREGPLPFSNVSPGLHRFAGLEARASFGSTRSNAPAAAARDTASGLDDPFAATGKPSSSFTSSTFEAQMRASLAAFRAKAEPAGDGGDPATLDLDRAPTYGLRREELIAKDAPESVVRGGLERYHTWRAAREGAVERGAVPSMRIVTVRARAASSAARAEGGGEHAERASHVADAAGGRAIDRDEAHGPVDDETLSALDAIAIGARFGALVHAVLGLVPLDADARTIDLLIAQQARVLGATADEREETAPVVSAALRHALFDRARAAAARGRLRRETPLAMTDARGALVEGVIDLAFEDDGGWVVVDFKTDQELAGVALATYRRQVQLYAHGISRATGRPASGILLRL

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
53 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
54 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
58 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
59 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
60 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
61 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
62 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
63 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
66 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
67 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
69 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
112 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
115 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
116 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
119 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
120 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
126 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
144 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.3
Nodule 0
Rhizoplane 1.97
Rhizosphere 94.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0002213 3300053153 Bacteria 16648
2 JGI25406J46586_10000695 3300003203 Bacteria 15683
3 JGI25406J46586_10001602 3300003203 Bacteria 10681
4 rootH2_10026311 3300003320 Bacteria 28781
5 rootL2_10004110 3300003322 Bacteria 3677
6 rootH1_10024137 3300003323 Bacteria 8438
7 rootH1_10086307 3300003323 Bacteria 26831
8 Ga0065712_10002352 3300005290 Bacteria 8687
9 Ga0065715_10000806 3300005293 Bacteria 11706
10 Ga0065715_10002827 3300005293 Bacteria 4422
11 Ga0070676_10007987 3300005328 Bacteria 5689
12 Ga0070683_100003691 3300005329 Bacteria 12491
13 Ga0070670_100002055 3300005331 Bacteria 16477
14 Ga0070670_100002236 3300005331 Bacteria 15916
15 Ga0070670_100012493 3300005331 Bacteria 7270
16 Ga0070670_100023958 3300005331 Bacteria 5250
17 Ga0070670_100024709 3300005331 Bacteria 5168
18 Ga0068869_100003304 3300005334 Bacteria 9850
19 Ga0068869_100009880 3300005334 Bacteria 6198
20 Ga0070666_10003361 3300005335 Bacteria 9706
21 Ga0070666_10021403 3300005335 Bacteria 4193
22 Ga0070689_100004938 3300005340 Bacteria 9051
23 Ga0070687_100011740 3300005343 Bacteria 3844
24 Ga0070669_100005398 3300005353 Bacteria 9221
25 Ga0070675_100000320 3300005354 Bacteria 32325
26 Ga0070675_100002698 3300005354 Bacteria 13341
27 Ga0070675_100010420 3300005354 Bacteria 7263
28 Ga0070675_100014126 3300005354 Bacteria 6292
29 Ga0070675_100022920 3300005354 Bacteria 4989
30 Ga0070675_100041929 3300005354 Bacteria 3739
31 Ga0070671_100007626 3300005355 Bacteria 8655
32 Ga0070674_100001736 3300005356 Bacteria 11808
33 Ga0070674_100005607 3300005356 Bacteria 7270
34 Ga0070673_100037412 3300005364 Bacteria 3697
35 Ga0070667_100002649 3300005367 Bacteria 15505
36 Ga0070714_100012193 3300005435 Bacteria 6852
37 Ga0070700_100011829 3300005441 Bacteria 4847
38 Ga0070694_100014451 3300005444 Bacteria 4944
39 Ga0070662_100026153 3300005457 Bacteria 4040
40 Ga0068867_100000356 3300005459 Bacteria 30408
41 Ga0068867_100002320 3300005459 Bacteria 13390
42 Ga0070685_10001332 3300005466 Bacteria 12962
43 Ga0070707_100012828 3300005468 Bacteria 7824
44 Ga0070707_100038033 3300005468 Bacteria 4596
45 Ga0070698_100009787 3300005471 Bacteria 10247
46 Ga0070698_100031941 3300005471 Bacteria 5456
47 Ga0070699_100004832 3300005518 Bacteria 11893
48 Ga0070699_100005975 3300005518 Bacteria 10634
49 Ga0070699_100023563 3300005518 Bacteria 5302
50 Ga0070699_100035353 3300005518 Bacteria 4319
51 Ga0070679_100053294 3300005530 Bacteria 4027
52 Ga0070697_100000121 3300005536 Bacteria 61906
53 Ga0070697_100009196 3300005536 Bacteria 7721
54 Ga0070672_100015304 3300005543 Bacteria 5458
55 Ga0070686_100000279 3300005544 Bacteria 34519
56 Ga0070695_100001165 3300005545 Bacteria 14432
57 Ga0070696_100017039 3300005546 Bacteria 4901
58 Ga0070665_100006639 3300005548 Bacteria 11761
59 Ga0070704_100000375 3300005549 Bacteria 20394
60 Ga0068855_100015399 3300005563 Bacteria 9206
61 Ga0070664_100000164 3300005564 Bacteria 45854
62 Ga0068857_100009501 3300005577 Bacteria 8444
63 Ga0068854_100004948 3300005578 Bacteria 8396
64 Ga0068856_100014662 3300005614 Bacteria 7565
65 Ga0070702_100005635 3300005615 Bacteria 5858
66 Ga0068859_100004464 3300005617 Bacteria 14274
67 Ga0068859_100016017 3300005617 Bacteria 7534
68 Ga0068864_100007593 3300005618 Bacteria 8932
69 Ga0068861_100003384 3300005719 Bacteria 10577
70 Ga0068870_10002136 3300005840 Bacteria 8183
71 Ga0068870_10002147 3300005840 Bacteria 8171
72 Ga0068863_100000525 3300005841 Bacteria 39048
73 Ga0068863_100018521 3300005841 Bacteria 6664
74 Ga0068860_100009929 3300005843 Bacteria 9433
75 Ga0068860_100011161 3300005843 Bacteria 8854
76 Ga0068862_100001369 3300005844 Bacteria 22657
77 Ga0068862_100002727 3300005844 Bacteria 15505
78 Ga0068862_100007407 3300005844 Bacteria 9100
79 Ga0081539_10000013 3300005985 Bacteria 432395
80 Ga0081539_10000280 3300005985 Bacteria 115290
81 Ga0081539_10000396 3300005985 Bacteria 93686
82 Ga0081539_10004746 3300005985 Bacteria 14686
83 Ga0075368_10004578 3300006042 Bacteria 4699
84 Ga0075364_10002702 3300006051 Bacteria 9966
85 Ga0075367_10001415 3300006178 Bacteria 10273
86 Ga0097621_100011321 3300006237 Bacteria 6564
87 Ga0075428_100000569 3300006844 Bacteria 37598
88 Ga0075428_100000872 3300006844 Bacteria 31708
89 Ga0075428_100001133 3300006844 Bacteria 28474
90 Ga0075428_100001524 3300006844 Bacteria 24782
91 Ga0075428_100002011 3300006844 Bacteria 21927
92 Ga0075428_100002577 3300006844 Bacteria 19701
93 Ga0075428_100006642 3300006844 Bacteria 12867
94 Ga0075428_100015603 3300006844 Bacteria 8421
95 Ga0075428_100017136 3300006844 Bacteria 8003
96 Ga0075428_100017322 3300006844 Bacteria 7962
97 Ga0075428_100042251 3300006844 Bacteria 5012
98 Ga0075430_100000021 3300006846 Bacteria 83951
99 Ga0075430_100000437 3300006846 Bacteria 30984
100 Ga0075430_100000950 3300006846 Bacteria 22794
101 Ga0075430_100002820 3300006846 Bacteria 14532
102 Ga0075431_100001614 3300006847 Bacteria 21044
103 Ga0075431_100002791 3300006847 Bacteria 16917
104 Ga0075431_100005606 3300006847 Bacteria 12398
105 Ga0075431_100007961 3300006847 Bacteria 10568
106 Ga0075431_100024100 3300006847 Bacteria 6232
107 Ga0075431_100035516 3300006847 Bacteria 5132
108 Ga0075433_10002050 3300006852 Bacteria 15223
109 Ga0075433_10006138 3300006852 Bacteria 9466
110 Ga0075433_10009498 3300006852 Bacteria 7773
111 Ga0075434_100000385 3300006871 Bacteria 32259
112 Ga0075434_100000556 3300006871 Bacteria 28600
113 Ga0075434_100006117 3300006871 Bacteria 11018
114 Ga0075434_100019108 3300006871 Bacteria 6623
115 Ga0075429_100000375 3300006880 Bacteria 32935
116 Ga0075429_100007269 3300006880 Bacteria 9608
117 Ga0075429_100036415 3300006880 Bacteria 4280
118 Ga0068865_100015333 3300006881 Bacteria 4886
119 Ga0075436_100000036 3300006914 Bacteria 84076
120 Ga0097620_100004464 3300006931 Bacteria 14274
121 Ga0097620_100016017 3300006931 Bacteria 7534
122 Ga0075435_100000014 3300007076 Bacteria 100771
123 Ga0075435_100000411 3300007076 Bacteria 26321
124 Ga0075435_100001212 3300007076 Bacteria 16503
125 Ga0075435_100003753 3300007076 Bacteria 10346
126 Ga0075435_100014612 3300007076 Bacteria 5876
127 Ga0075435_100021486 3300007076 Bacteria 4965
128 Ga0099794_10000040 3300007265 Bacteria 51149
129 Ga0111539_10002251 3300009094 Bacteria 25716
130 Ga0111539_10002697 3300009094 Bacteria 23524
131 Ga0111539_10010449 3300009094 Bacteria 11683
132 Ga0105245_10000111 3300009098 Bacteria 79021
133 Ga0105245_10002895 3300009098 Bacteria 15392
134 Ga0114129_10000263 3300009147 Bacteria 59355
135 Ga0114129_10002249 3300009147 Bacteria 26666
136 Ga0114129_10002264 3300009147 Bacteria 26623
137 Ga0114129_10002435 3300009147 Bacteria 25826
138 Ga0114129_10002820 3300009147 Bacteria 24254
139 Ga0114129_10006779 3300009147 Bacteria 16264
140 Ga0114129_10008368 3300009147 Bacteria 14741
141 Ga0114129_10017618 3300009147 Bacteria 10168
142 Ga0114129_10023803 3300009147 Bacteria 8681
143 Ga0114129_10027008 3300009147 Bacteria 8127
144 Ga0114129_10032111 3300009147 Bacteria 7422
145 Ga0114129_10038248 3300009147 Bacteria 6770
146 Ga0114129_10055739 3300009147 Bacteria 5539
147 Ga0114129_10058086 3300009147 Bacteria 5412
148 Ga0114129_10073056 3300009147 Bacteria 4779
149 Ga0105241_10004894 3300009174 Bacteria 9879
150 Ga0105241_10008857 3300009174 Bacteria 7398
151 Ga0105248_10005812 3300009177 Bacteria 13563
152 Ga0105248_10044281 3300009177 Bacteria 4992
153 Ga0105238_10010149 3300009551 Bacteria 9446
154 Ga0105249_10000242 3300009553 Bacteria 60635
155 Ga0157378_10003272 3300013297 Bacteria 14400
156 Ga0163162_10032680 3300013306 Bacteria 5169
157 Ga0157375_10007693 3300013308 Bacteria 9428
158 Ga0157375_10017250 3300013308 Bacteria 6511
159 Ga0163163_10008093 3300014325 Bacteria 9315
160 Ga0163163_10015022 3300014325 Bacteria 7139
161 Ga0163163_10026896 3300014325 Bacteria 5504
162 Ga0157380_10002081 3300014326 Bacteria 13416
163 Ga0157380_10015166 3300014326 Bacteria 5657
164 Ga0157376_10038744 3300014969 Bacteria 3880
165 Ga0163161_10008959 3300017792 Bacteria 6920
166 Ga0207697_10001710 3300025315 Bacteria 11804
167 Ga0207682_10001096 3300025893 Bacteria 12518
168 Ga0207688_10000562 3300025901 Bacteria 18152
169 Ga0207688_10007376 3300025901 Bacteria 5986
170 Ga0207645_10006857 3300025907 Bacteria 8127
171 Ga0207645_10007561 3300025907 Bacteria 7663
172 Ga0207645_10014317 3300025907 Bacteria 5312
173 Ga0207643_10000360 3300025908 Bacteria 30533
174 Ga0207643_10001435 3300025908 Bacteria 13676
175 Ga0207643_10002126 3300025908 Bacteria 10901
176 Ga0207654_10009143 3300025911 Bacteria 5024
177 Ga0207662_10005946 3300025918 Bacteria 6553
178 Ga0207646_10013214 3300025922 Bacteria 7900
179 Ga0207681_10000652 3300025923 Bacteria 23069
180 Ga0207681_10005832 3300025923 Bacteria 7553
181 Ga0207681_10008314 3300025923 Bacteria 6345
182 Ga0207650_10015902 3300025925 Bacteria 5249
183 Ga0207650_10022849 3300025925 Bacteria 4432
184 Ga0207659_10004859 3300025926 Bacteria 8145
185 Ga0207659_10009726 3300025926 Bacteria 6014
186 Ga0207659_10024031 3300025926 Bacteria 4077
187 Ga0207687_10000780 3300025927 Bacteria 21460
188 Ga0207687_10016426 3300025927 Bacteria 4862
189 Ga0207700_10005091 3300025928 Bacteria 7814
190 Ga0207706_10002433 3300025933 Bacteria 18176
191 Ga0207686_10005712 3300025934 Bacteria 6671
192 Ga0207670_10011672 3300025936 Bacteria 5110
193 Ga0207670_10016681 3300025936 Bacteria 4420
194 Ga0207691_10003205 3300025940 Bacteria 15956
195 Ga0207711_10008550 3300025941 Bacteria 8561
196 Ga0207689_10021715 3300025942 Bacteria 5399
197 Ga0207661_10012944 3300025944 Bacteria 6086
198 Ga0207667_10004206 3300025949 Bacteria 17667
199 Ga0207708_10005330 3300026075 Bacteria 9474
200 Ga0207708_10011711 3300026075 Bacteria 6536
201 Ga0207648_10001006 3300026089 Bacteria 31735
202 Ga0207648_10015774 3300026089 Bacteria 6929
203 Ga0207674_10014904 3300026116 Bacteria 8571
204 Ga0207674_10021246 3300026116 Bacteria 6996
205 Ga0207675_100002140 3300026118 Bacteria 19602
206 Ga0207675_100003449 3300026118 Bacteria 15452
207 Ga0207683_10003052 3300026121 Bacteria 14645
208 Ga0207683_10025445 3300026121 Bacteria 5106
209 Ga0209588_1000028 3300027671 Bacteria 80097
210 Ga0207428_10003657 3300027907 Bacteria 14821
211 Ga0207428_10013930 3300027907 Bacteria 7005
212 Ga0268265_10001311 3300028380 Bacteria 21331
213 Ga0268265_10004654 3300028380 Bacteria 9475
214 Ga0268265_10010089 3300028380 Bacteria 6376
215 Ga0268264_10003217 3300028381 Bacteria 14146
216 Ga0265339_10000775 3300031249 Bacteria 24711
217 Ga0265331_10004963 3300031250 Bacteria 8173
218 Ga0265314_10001500 3300031711 Bacteria 25881
219 Ga0307405_10006503 3300031731 Bacteria 5753
220 Ga0307407_10004585 3300031903 Bacteria 5886
221 Ga0307407_10011695 3300031903 Bacteria 4190
222 Ga0307412_10005240 3300031911 Bacteria 7270
223 Ga0307414_10011865 3300032004 Bacteria 5132
224 Ga0307411_10003117 3300032005 Bacteria 7595
225 Ga0373948_0000592 3300034817 Bacteria 4644
226 Ga0373939_0001309 3300035114 Bacteria 6046
227 Ga0373937_0004724 3300036401 Bacteria 11586
228 Ga0395900_0006469 3300037418 Bacteria 12214
229 Ga0395898_0016263 3300037466 Bacteria 7613
230 Ga0436365_1087144 3300039437 Bacteria 5920
231 Ga0451807_0001711 3300041486 Bacteria 7584
232 Ga0453683_0001881 3300044673 Bacteria 17195
233 Ga0451576_0009196 3300045051 Bacteria 11481
234 Ga0451576_0013694 3300045051 Bacteria 9059
235 Ga0495629_0004335 3300046459 Bacteria 10638
236 Ga0495638_0002802 3300046460 Bacteria 13966
237 Ga0495645_0004670 3300046543 Bacteria 9349
238 Ga0495672_0018466 3300047320 Bacteria 4628
239 Ga0496104_0005501 3300048907 Bacteria 11093
240 Ga0496104_0015203 3300048907 Bacteria 6968
241 Ga0496109_0000433 3300048912 Bacteria 36449
242 Ga0496112_0000294 3300048915 Bacteria 32431
243 Ga0496112_0002032 3300048915 Bacteria 16029
244 Ga0501034_0028800 3300049571 Bacteria 5650
245 Ga0501042_0012315 3300049578 Bacteria 5791
246 Ga0501068_0023049 3300049584 Bacteria 3647
247 Ga0501071_0003395 3300049587 Bacteria 9948
248 Ga0501072_0005877 3300049588 Bacteria 9345
249 Ga0501072_0027203 3300049588 Bacteria 4463
250 Ga0501076_0003411 3300049592 Bacteria 11153
251 Ga0501076_0006588 3300049592 Bacteria 8423
252 Ga0501081_0003778 3300049743 Bacteria 9695
253 Ga0501045_0017026 3300049824 Bacteria 5162
254 nmdc:mga00v17_1465_c1 3300050491 Bacteria 12349
255 nmdc:mga0k408_2299_c1 3300050493 Bacteria 8852
256 nmdc:mga05p37_14546_c1 3300050507 Bacteria 9451
257 nmdc:mga05p37_1906_c1 3300050507 Bacteria 24268
258 nmdc:mga05p37_30403_c1 3300050507 Bacteria 6590
259 nmdc:mga05p37_31371_c1 3300050507 Bacteria 6490
260 nmdc:mga05p37_31735_c1 3300050507 Bacteria 6456
261 nmdc:mga05p37_43742_c1 3300050507 Bacteria 5510
262 nmdc:mga05p37_4488_c1 3300050507 Bacteria 16319
263 nmdc:mga05p37_4832_c1 3300050507 Bacteria 15759
264 nmdc:mga05p37_48509_c1 3300050507 Bacteria 5222
265 nmdc:mga05p37_591_c1 3300050507 Bacteria 39971
266 nmdc:mga05p37_6248_c1 3300050507 Bacteria 14026
267 nmdc:mga05p37_6873_c1 3300050507 Bacteria 13410
268 nmdc:mga05p37_7879_c1 3300050507 Bacteria 12572
269 nmdc:mga05p37_81750_c1 3300050507 Bacteria 3980
270 nmdc:mga09592_1453_c1 3300050508 Bacteria 19031
271 nmdc:mga09592_409_c1 3300050508 Bacteria 31498
272 nmdc:mga0qj67_689_c1 3300050509 Bacteria 23022
273 nmdc:mga0qj67_822_c1 3300050509 Bacteria 21228
274 nmdc:mga06r32_131_c1 3300050510 Bacteria 54857
275 nmdc:mga06r32_1977_c2 3300050510 Bacteria 15828
276 nmdc:mga06r32_2235_c1 3300050510 Bacteria 17324
277 nmdc:mga06r32_23382_c1 3300050510 Bacteria 5716
278 nmdc:mga06r32_27008_c1 3300050510 Bacteria 5358
279 nmdc:mga08y16_13616_c1 3300050511 Bacteria 8561
280 nmdc:mga08y16_37857_c1 3300050511 Bacteria 5064
281 nmdc:mga08y16_4259_c1 3300050511 Bacteria 14936
282 nmdc:mga08y16_57442_c1 3300050511 Bacteria 4066
283 nmdc:mga0n895_2961_c1 3300050512 Bacteria 13476
284 nmdc:mga0n895_3898_c1 3300050512 Bacteria 12129
285 nmdc:mga0n895_5881_c1 3300050512 Bacteria 10311
286 nmdc:mga0rr50_11702_c1 3300050513 Bacteria 5631
287 nmdc:mga0rr50_1729_c1 3300050513 Bacteria 12046
288 nmdc:mga0rr50_2_c1 3300050513 Bacteria 373938
289 nmdc:mga08x19_76_c1 3300050514 Bacteria 92204
290 nmdc:mga0a205_1373_c1 3300050515 Bacteria 20563
291 nmdc:mga0a205_13876_c1 3300050515 Bacteria 7510
292 nmdc:mga0a205_14748_c1 3300050515 Bacteria 7291
293 nmdc:mga0a205_7398_c1 3300050515 Bacteria 9945
294 nmdc:mga0a205_7725_c1 3300050515 Bacteria 9762
295 Ga0500645_000041 3300053730 Bacteria 110646
296 Ga0501084_0009892 3300054114 Bacteria 7882
297 Ga0501084_0035279 3300054114 Bacteria 4181
298 Ga0501084_0039599 3300054114 Bacteria 3942
299 Ga0590071_000023 3300059421 Bacteria 39301
300 Ga0590074_000173 3300059423 Bacteria 7990
301 Ga0590075_000525 3300059424 Bacteria 10374
302 Ga0590077_000514 3300059426 Bacteria 10720
303 Ga0590077_000628 3300059426 Bacteria 9478
304 Ga0590077_001029 3300059426 Bacteria 6976
305 Ga0501082_0016065 3300060353 Bacteria 6440
306 Ga0500616_0002213
307 JGI25406J46586_10000695
308 JGI25406J46586_10001602
309 rootH2_10026311
310 rootL2_10004110
311 rootH1_10024137
312 rootH1_10086307
313 Ga0065712_10002352
314 Ga0065715_10000806
315 Ga0065715_10002827
316 Ga0070676_10007987
317 Ga0070683_100003691
318 Ga0070670_100002055
319 Ga0070670_100002236
320 Ga0070670_100012493
321 Ga0070670_100023958
322 Ga0070670_100024709
323 Ga0068869_100003304
324 Ga0068869_100009880
325 Ga0070666_10003361
326 Ga0070666_10021403
327 Ga0070689_100004938
328 Ga0070687_100011740
329 Ga0070669_100005398
330 Ga0070675_100000320
331 Ga0070675_100002698
332 Ga0070675_100010420
333 Ga0070675_100014126
334 Ga0070675_100022920
335 Ga0070675_100041929
336 Ga0070671_100007626
337 Ga0070674_100001736
338 Ga0070674_100005607
339 Ga0070673_100037412
340 Ga0070667_100002649
341 Ga0070714_100012193
342 Ga0070700_100011829
343 Ga0070694_100014451
344 Ga0070662_100026153
345 Ga0068867_100000356
346 Ga0068867_100002320
347 Ga0070685_10001332
348 Ga0070707_100012828
349 Ga0070707_100038033
350 Ga0070698_100009787
351 Ga0070698_100031941
352 Ga0070699_100004832
353 Ga0070699_100005975
354 Ga0070699_100023563
355 Ga0070699_100035353
356 Ga0070679_100053294
357 Ga0070697_100000121
358 Ga0070697_100009196
359 Ga0070672_100015304
360 Ga0070686_100000279
361 Ga0070695_100001165
362 Ga0070696_100017039
363 Ga0070665_100006639
364 Ga0070704_100000375
365 Ga0068855_100015399
366 Ga0070664_100000164
367 Ga0068857_100009501
368 Ga0068854_100004948
369 Ga0068856_100014662
370 Ga0070702_100005635
371 Ga0068859_100004464
372 Ga0068859_100016017
373 Ga0068864_100007593
374 Ga0068861_100003384
375 Ga0068870_10002136
376 Ga0068870_10002147
377 Ga0068863_100000525
378 Ga0068863_100018521
379 Ga0068860_100009929
380 Ga0068860_100011161
381 Ga0068862_100001369
382 Ga0068862_100002727
383 Ga0068862_100007407
384 Ga0081539_10000013
385 Ga0081539_10000280
386 Ga0081539_10000396
387 Ga0081539_10004746
388 Ga0075368_10004578
389 Ga0075364_10002702
390 Ga0075367_10001415
391 Ga0097621_100011321
392 Ga0075428_100000569
393 Ga0075428_100000872
394 Ga0075428_100001133
395 Ga0075428_100001524
396 Ga0075428_100002011
397 Ga0075428_100002577
398 Ga0075428_100006642
399 Ga0075428_100015603
400 Ga0075428_100017136
401 Ga0075428_100017322
402 Ga0075428_100042251
403 Ga0075430_100000021
404 Ga0075430_100000437
405 Ga0075430_100000950
406 Ga0075430_100002820
407 Ga0075431_100001614
408 Ga0075431_100002791
409 Ga0075431_100005606
410 Ga0075431_100007961
411 Ga0075431_100024100
412 Ga0075431_100035516
413 Ga0075433_10002050
414 Ga0075433_10006138
415 Ga0075433_10009498
416 Ga0075434_100000385
417 Ga0075434_100000556
418 Ga0075434_100006117
419 Ga0075434_100019108
420 Ga0075429_100000375
421 Ga0075429_100007269
422 Ga0075429_100036415
423 Ga0068865_100015333
424 Ga0075436_100000036
425 Ga0097620_100004464
426 Ga0097620_100016017
427 Ga0075435_100000014
428 Ga0075435_100000411
429 Ga0075435_100001212
430 Ga0075435_100003753
431 Ga0075435_100014612
432 Ga0075435_100021486
433 Ga0099794_10000040
434 Ga0111539_10002251
435 Ga0111539_10002697
436 Ga0111539_10010449
437 Ga0105245_10000111
438 Ga0105245_10002895
439 Ga0114129_10000263
440 Ga0114129_10002249
441 Ga0114129_10002264
442 Ga0114129_10002435
443 Ga0114129_10002820
444 Ga0114129_10006779
445 Ga0114129_10008368
446 Ga0114129_10017618
447 Ga0114129_10023803
448 Ga0114129_10027008
449 Ga0114129_10032111
450 Ga0114129_10038248
451 Ga0114129_10055739
452 Ga0114129_10058086
453 Ga0114129_10073056
454 Ga0105241_10004894
455 Ga0105241_10008857
456 Ga0105248_10005812
457 Ga0105248_10044281
458 Ga0105238_10010149
459 Ga0105249_10000242
460 Ga0157378_10003272
461 Ga0163162_10032680
462 Ga0157375_10007693
463 Ga0157375_10017250
464 Ga0163163_10008093
465 Ga0163163_10015022
466 Ga0163163_10026896
467 Ga0157380_10002081
468 Ga0157380_10015166
469 Ga0157376_10038744
470 Ga0163161_10008959
471 Ga0207697_10001710
472 Ga0207682_10001096
473 Ga0207688_10000562
474 Ga0207688_10007376
475 Ga0207645_10006857
476 Ga0207645_10007561
477 Ga0207645_10014317
478 Ga0207643_10000360
479 Ga0207643_10001435
480 Ga0207643_10002126
481 Ga0207654_10009143
482 Ga0207662_10005946
483 Ga0207646_10013214
484 Ga0207681_10000652
485 Ga0207681_10005832
486 Ga0207681_10008314
487 Ga0207650_10015902
488 Ga0207650_10022849
489 Ga0207659_10004859
490 Ga0207659_10009726
491 Ga0207659_10024031
492 Ga0207687_10000780
493 Ga0207687_10016426
494 Ga0207700_10005091
495 Ga0207706_10002433
496 Ga0207686_10005712
497 Ga0207670_10011672
498 Ga0207670_10016681
499 Ga0207691_10003205
500 Ga0207711_10008550
501 Ga0207689_10021715
502 Ga0207661_10012944
503 Ga0207667_10004206
504 Ga0207708_10005330
505 Ga0207708_10011711
506 Ga0207648_10001006
507 Ga0207648_10015774
508 Ga0207674_10014904
509 Ga0207674_10021246
510 Ga0207675_100002140
511 Ga0207675_100003449
512 Ga0207683_10003052
513 Ga0207683_10025445
514 Ga0209588_1000028
515 Ga0207428_10003657
516 Ga0207428_10013930
517 Ga0268265_10001311
518 Ga0268265_10004654
519 Ga0268265_10010089
520 Ga0268264_10003217
521 Ga0265339_10000775
522 Ga0265331_10004963
523 Ga0265314_10001500
524 Ga0307405_10006503
525 Ga0307407_10004585
526 Ga0307407_10011695
527 Ga0307412_10005240
528 Ga0307414_10011865
529 Ga0307411_10003117
530 Ga0373948_0000592
531 Ga0373939_0001309
532 Ga0373937_0004724
533 Ga0395900_0006469
534 Ga0395898_0016263
535 Ga0436365_1087144
536 Ga0451807_0001711
537 Ga0453683_0001881
538 Ga0451576_0009196
539 Ga0451576_0013694
540 Ga0495629_0004335
541 Ga0495638_0002802
542 Ga0495645_0004670
543 Ga0495672_0018466
544 Ga0496104_0005501
545 Ga0496104_0015203
546 Ga0496109_0000433
547 Ga0496112_0000294
548 Ga0496112_0002032
549 Ga0501034_0028800
550 Ga0501042_0012315
551 Ga0501068_0023049
552 Ga0501071_0003395
553 Ga0501072_0005877
554 Ga0501072_0027203
555 Ga0501076_0003411
556 Ga0501076_0006588
557 Ga0501081_0003778
558 Ga0501045_0017026
559 nmdc:mga00v17_1465_c1
560 nmdc:mga0k408_2299_c1
561 nmdc:mga05p37_14546_c1
562 nmdc:mga05p37_1906_c1
563 nmdc:mga05p37_30403_c1
564 nmdc:mga05p37_31371_c1
565 nmdc:mga05p37_31735_c1
566 nmdc:mga05p37_43742_c1
567 nmdc:mga05p37_4488_c1
568 nmdc:mga05p37_4832_c1
569 nmdc:mga05p37_48509_c1
570 nmdc:mga05p37_591_c1
571 nmdc:mga05p37_6248_c1
572 nmdc:mga05p37_6873_c1
573 nmdc:mga05p37_7879_c1
574 nmdc:mga05p37_81750_c1
575 nmdc:mga09592_1453_c1
576 nmdc:mga09592_409_c1
577 nmdc:mga0qj67_689_c1
578 nmdc:mga0qj67_822_c1
579 nmdc:mga06r32_131_c1
580 nmdc:mga06r32_1977_c2
581 nmdc:mga06r32_2235_c1
582 nmdc:mga06r32_23382_c1
583 nmdc:mga06r32_27008_c1
584 nmdc:mga08y16_13616_c1
585 nmdc:mga08y16_37857_c1
586 nmdc:mga08y16_4259_c1
587 nmdc:mga08y16_57442_c1
588 nmdc:mga0n895_2961_c1
589 nmdc:mga0n895_3898_c1
590 nmdc:mga0n895_5881_c1
591 nmdc:mga0rr50_11702_c1
592 nmdc:mga0rr50_1729_c1
593 nmdc:mga0rr50_2_c1
594 nmdc:mga08x19_76_c1
595 nmdc:mga0a205_1373_c1
596 nmdc:mga0a205_13876_c1
597 nmdc:mga0a205_14748_c1
598 nmdc:mga0a205_7398_c1
599 nmdc:mga0a205_7725_c1
600 Ga0500645_000041
601 Ga0501084_0009892
602 Ga0501084_0035279
603 Ga0501084_0039599
604 Ga0590071_000023
605 Ga0590074_000173
606 Ga0590075_000525
607 Ga0590077_000514
608 Ga0590077_000628
609 Ga0590077_001029
610 Ga0501082_0016065

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13245

AAA_19

AAA domain

32

442

0.9

PF00580

UvrD-helicase

UvrD/REP helicase N-terminal domain

28

457

0.89

PF13361

UvrD_C

UvrD-like helicase C-terminal domain

596

878

0.74

PF12705

PDDEXK_1

PD-(D/E)XK nuclease superfamily

1110

1267

0.64

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qhh-assembly1.cif.gz_A structure of dna helicase with adpnp 0.8574 9 142
6lhj-assembly1.cif.gz_B quadruple mutant (n51i+c59r+s108n+i164l) plasmodium falciparum dihydrofolate reductase-thymidylate synthase (pfdhfr-ts) complexed with c452 (compound 16) and nadph 0.7562 1105 1157
7f3y-assembly1.cif.gz_B wild-type plasmodium falciparum dihydrofolate reductase-thymidylate synthase (pfdhfr-ts) complexed with methotrexate (mtx), nadph and dump 0.7524 1105 1157
6kpr-assembly1.cif.gz_B quadruple mutant (n51i+c59r+s108n+i164l) plasmodium falciparum dihydrofolate reductase-thymidylate synthase (pfdhfr-ts) complexed with b12155 inhibitor 0.7514 1105 1157
6kot-assembly1.cif.gz_A quadruple mutant (n51i+c59r+s108n+i164l) plasmodium falciparum dihydrofolate reductase-thymidylate synthase (pfdhfr-ts) complexed with b12128 and nadph 0.7504 1105 1157
ID Description Score Start End Superfamily
2is1A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8897 11 448 3.40.50.300
2pjrA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8638 4 448 3.40.50.300
3u44A05 Mainly Alpha;Orthogonal Bundle;PCRA; domain 4;PCRA; domain 4 0.8603 596 744 1.10.486.10
1qhhA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8574 9 142 3.40.50.300
af_B1ARD8_592_767_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8566 20 71 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7X4BFQ2-F1-model_v4 deleted 0.9596 1 123
AF-A0A2V8LKI3-F1-model_v4 ATP-dependent deoxyribonuclease subunit A 0.9581 5 428 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0009338
GO:0009378
GO:0016787
GO:0036121
GO:0061749
GO:1990518
AF-A0A7Y2CPT0-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9477 3 800 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0009338
GO:0016787
GO:0016853
GO:0043138
AF-A0A2V8LKI3-F1-model_v4 ATP-dependent deoxyribonuclease subunit A 0.9448 5 428 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0009338
GO:0009378
GO:0016787
GO:0036121
GO:0061749
GO:1990518
AF-A0A7Y2CPT0-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9431 3 800 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0009338
GO:0016787
GO:0016853
GO:0043138

Map