F398309

General Info

Members Datasets Scaffolds Average Seq Length
305 189 610 275

Family's Representative Sequence

Representative Sequence 3300048913|Ga0496110_0521961|Ga0496110_0521961_157_1068
Length 303
Sequence MNSGQTTTTPVGPVIDTAAAPSVAARMVEQQKPDLLLTQEHHMCPGCGEPVAVRQFLETITQLDAVERAIGVAGIGCYTSFSGSMDVDLVQALHGRAPSVATGVKRMLPDALVFTLQGDGDMVNEGLQEVIHTAARGERITCILLNNGVFGETGGHMTATSVIGQRTKNSLDGRDAEYHGYPILIGDLIAQLQGAAYVARGSVHNAGAVARTQKMFKRAFESQLAGAGFSFVEVLTMCPTGWFIPTPEGPSYMQETLGEVHIMGELKVDGRVRTTEELHAENVAKQREVDEALARGGVNHETI

Samples

Sample ID Description Type Environment
1 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
107 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
108 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
111 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
112 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
113 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
116 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
119 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
120 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
121 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
122 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
123 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
124 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
125 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
126 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
127 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
128 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
129 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
130 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
131 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
132 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
133 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
134 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
135 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
136 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
137 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
138 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
139 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
140 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
141 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
142 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
143 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
144 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
145 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
146 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
149 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
150 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
151 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
152 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
165 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
166 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
167 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
168 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
169 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
172 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
180 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
181 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
182 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
183 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
184 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
185 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
186 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
187 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
188 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
189 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.67
Metatranscriptomes 0
Isolates 0.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.15
Nodule 0.33
Rhizoplane 9.18
Rhizosphere 78.03
Stem 0
Stem Tuber 0
Unclassified 5.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496110_0521961 3300048913 Bacteria 1080
2 JGI24736J21556_1000216 3300001904 Bacteria 10353
3 JGI24740J21852_10000753 3300001979 Bacteria 14159
4 JGI24739J22299_10001095 3300001989 Bacteria 10095
5 JGI24737J22298_10001971 3300001990 Bacteria 7332
6 JGI24735J21928_10001812 3300002067 Bacteria 7507
7 JGI24738J21930_10000198 3300002075 Bacteria 15932
8 Ga0070658_10004234 3300005327 Bacteria 11730
9 Ga0070666_10214635 3300005335 Bacteria 1356
10 Ga0070682_100162680 3300005337 Bacteria 1543
11 Ga0070660_100017070 3300005339 Bacteria 5284
12 Ga0070660_100637702 3300005339 Bacteria 892
13 Ga0070661_100009082 3300005344 Bacteria 6876
14 Ga0070668_100244565 3300005347 Unclassified 1487
15 Ga0070668_100447210 3300005347 Bacteria 1110
16 Ga0070669_100000526 3300005353 Bacteria 28506
17 Ga0070669_100643878 3300005353 Bacteria 891
18 Ga0070675_100102985 3300005354 Unclassified 2406
19 Ga0070713_100115839 3300005436 Bacteria 2343
20 Ga0070705_100374065 3300005440 Bacteria 1046
21 Ga0070708_100046938 3300005445 Bacteria 3813
22 Ga0070708_100119184 3300005445 Bacteria 2432
23 Ga0070708_100135451 3300005445 Bacteria 2281
24 Ga0070663_100029868 3300005455 Bacteria 3729
25 Ga0070662_100000359 3300005457 Bacteria 27296
26 Ga0070662_100065387 3300005457 Unclassified 2666
27 Ga0070706_100000819 3300005467 Bacteria 34477
28 Ga0070706_100042977 3300005467 Bacteria 4175
29 Ga0070706_100105656 3300005467 Bacteria 2619
30 Ga0070706_100152000 3300005467 Bacteria 2161
31 Ga0070707_100209526 3300005468 Bacteria 1900
32 Ga0070707_100683723 3300005468 Bacteria 989
33 Ga0070699_100646835 3300005518 Bacteria 965
34 Ga0068853_100073398 3300005539 Bacteria 2983
35 Ga0070672_100061671 3300005543 Bacteria 2957
36 Ga0070696_100038212 3300005546 Bacteria 3313
37 Ga0070696_100284209 3300005546 Bacteria 1262
38 Ga0070665_100012912 3300005548 Bacteria 8413
39 Ga0070665_100215585 3300005548 Bacteria 1920
40 Ga0070704_100219552 3300005549 Bacteria 1545
41 Ga0068855_100093591 3300005563 Bacteria 3465
42 Ga0068855_100176817 3300005563 Bacteria 2415
43 Ga0070664_100023572 3300005564 Bacteria 5084
44 Ga0068857_100426273 3300005577 Bacteria 1237
45 Ga0068854_100006795 3300005578 Bacteria 7292
46 Ga0068856_100015849 3300005614 Bacteria 7288
47 Ga0068856_100688446 3300005614 Bacteria 1043
48 Ga0068852_100005187 3300005616 Bacteria 9290
49 Ga0068859_100614226 3300005617 Bacteria 1180
50 Ga0068864_100217611 3300005618 Bacteria 1761
51 Ga0068851_10001527 3300005834 Bacteria 10144
52 Ga0068858_100004630 3300005842 Bacteria 13469
53 Ga0068858_100005960 3300005842 Bacteria 11903
54 Ga0068858_100051064 3300005842 Bacteria 3826
55 Ga0068860_100228342 3300005843 Unclassified 1809
56 Ga0068862_100276620 3300005844 Unclassified 1537
57 Ga0075368_10058367 3300006042 Bacteria 1542
58 Ga0075363_100010918 3300006048 Bacteria 4333
59 Ga0075363_100137145 3300006048 Bacteria 1375
60 Ga0075364_10002496 3300006051 Bacteria 10301
61 Ga0075364_10003460 3300006051 Bacteria 8985
62 Ga0075364_10025146 3300006051 Bacteria 3788
63 Ga0075364_10077256 3300006051 Bacteria 2198
64 Ga0075364_10215313 3300006051 Bacteria 1303
65 Ga0075362_10011643 3300006177 Bacteria 3471
66 Ga0075362_10013091 3300006177 Bacteria 3312
67 Ga0075370_10023420 3300006353 Bacteria 3401
68 Ga0075370_10051398 3300006353 Bacteria 2338
69 Ga0075370_10169166 3300006353 Bacteria 1284
70 Ga0075370_10355860 3300006353 Bacteria 875
71 Ga0075428_100043616 3300006844 Bacteria 4931
72 Ga0075428_100135602 3300006844 Bacteria 2677
73 Ga0075428_100631465 3300006844 Bacteria 1143
74 Ga0075430_100022427 3300006846 Bacteria 5372
75 Ga0075430_100240956 3300006846 Bacteria 1499
76 Ga0075430_100276652 3300006846 Bacteria 1389
77 Ga0075430_100455533 3300006846 Bacteria 1056
78 Ga0075431_100091131 3300006847 Bacteria 3146
79 Ga0075431_100153743 3300006847 Bacteria 2368
80 Ga0075431_100415587 3300006847 Bacteria 1345
81 Ga0075433_10001756 3300006852 Bacteria 16209
82 Ga0075434_100024866 3300006871 Bacteria 5855
83 Ga0075434_100071650 3300006871 Bacteria 3457
84 Ga0075429_100014429 3300006880 Bacteria 6846
85 Ga0075429_100025265 3300006880 Bacteria 5156
86 Ga0075436_100049705 3300006914 Bacteria 2894
87 Ga0097620_100614080 3300006931 Bacteria 1180
88 Ga0075435_100013635 3300007076 Bacteria 6054
89 Ga0105240_10060720 3300009093 Bacteria 4712
90 Ga0105240_10123522 3300009093 Bacteria 3114
91 Ga0105240_10159439 3300009093 Bacteria 2681
92 Ga0111539_10075662 3300009094 Bacteria 3965
93 Ga0111539_10436473 3300009094 Unclassified 1525
94 Ga0105245_10488305 3300009098 Bacteria 1246
95 Ga0105247_10293834 3300009101 Bacteria 1125
96 Ga0105243_10160148 3300009148 Bacteria 1940
97 Ga0105243_10163021 3300009148 Bacteria 1924
98 Ga0105241_10088647 3300009174 Bacteria 2437
99 Ga0105248_10369023 3300009177 Bacteria 1616
100 Ga0105248_10700547 3300009177 Bacteria 1143
101 Ga0105237_10024713 3300009545 Bacteria 6146
102 Ga0105238_10009419 3300009551 Bacteria 9779
103 Ga0105238_10189003 3300009551 Bacteria 2036
104 Ga0105238_10257389 3300009551 Bacteria 1725
105 Ga0105239_10168183 3300010375 Bacteria 2451
106 Ga0105239_10818058 3300010375 Bacteria 1067
107 Ga0157370_10044460 3300013104 Bacteria 4269
108 Ga0157369_10004253 3300013105 Bacteria 16952
109 Ga0157369_10494602 3300013105 Bacteria 1265
110 Ga0157374_10530625 3300013296 Bacteria 1184
111 Ga0157378_10791531 3300013297 Bacteria 973
112 Ga0163162_10189878 3300013306 Bacteria 2182
113 Ga0163162_10878203 3300013306 Bacteria 1011
114 Ga0163163_10089648 3300014325 Bacteria 3088
115 Ga0213876_10027524 3300021384 Bacteria 2999
116 Ga0207656_10002792 3300025321 Bacteria 5933
117 Ga0207680_10130148 3300025903 Bacteria 1658
118 Ga0207647_10002462 3300025904 Bacteria 14028
119 Ga0207645_10179547 3300025907 Bacteria 1389
120 Ga0207705_10054221 3300025909 Bacteria 2890
121 Ga0207684_10016868 3300025910 Bacteria 6271
122 Ga0207684_10046735 3300025910 Bacteria 3673
123 Ga0207684_10051805 3300025910 Bacteria 3483
124 Ga0207684_10106758 3300025910 Bacteria 2395
125 Ga0207684_10141036 3300025910 Bacteria 2072
126 Ga0207654_10000434 3300025911 Bacteria 23965
127 Ga0207695_10010663 3300025913 Bacteria 11226
128 Ga0207695_10086911 3300025913 Bacteria 3151
129 Ga0207695_10160018 3300025913 Bacteria 2184
130 Ga0207695_10190712 3300025913 Bacteria 1967
131 Ga0207695_10365764 3300025913 Bacteria 1329
132 Ga0207671_10000945 3300025914 Bacteria 36108
133 Ga0207657_10096439 3300025919 Bacteria 2460
134 Ga0207646_10108223 3300025922 Bacteria 2494
135 Ga0207646_10253651 3300025922 Bacteria 1589
136 Ga0207646_10502099 3300025922 Bacteria 1093
137 Ga0207681_10000483 3300025923 Bacteria 27896
138 Ga0207681_10151802 3300025923 Bacteria 1737
139 Ga0207681_10250498 3300025923 Bacteria 1383
140 Ga0207694_10002374 3300025924 Bacteria 15400
141 Ga0207694_10006161 3300025924 Bacteria 9165
142 Ga0207700_10101552 3300025928 Bacteria 2295
143 Ga0207706_10003889 3300025933 Bacteria 14184
144 Ga0207709_10178461 3300025935 Bacteria 1497
145 Ga0207665_10255856 3300025939 Bacteria 1295
146 Ga0207691_10081997 3300025940 Bacteria 2898
147 Ga0207679_10278920 3300025945 Unclassified 1432
148 Ga0207667_10005650 3300025949 Bacteria 15258
149 Ga0207667_10010140 3300025949 Bacteria 11033
150 Ga0207667_10163541 3300025949 Unclassified 2288
151 Ga0207668_10206040 3300025972 Bacteria 1570
152 Ga0207668_10429191 3300025972 Bacteria 1123
153 Ga0207640_10017937 3300025981 Bacteria 4149
154 Ga0207703_10003323 3300026035 Bacteria 13506
155 Ga0207703_10067117 3300026035 Unclassified 2952
156 Ga0207703_10191049 3300026035 Bacteria 1813
157 Ga0207639_10004511 3300026041 Bacteria 9387
158 Ga0207678_10010720 3300026067 Bacteria 8052
159 Ga0207678_10429561 3300026067 Bacteria 1146
160 Ga0207702_10000484 3300026078 Bacteria 44768
161 Ga0207648_10373107 3300026089 Bacteria 1289
162 Ga0207676_10281052 3300026095 Bacteria 1511
163 Ga0207676_10361990 3300026095 Bacteria 1344
164 Ga0207674_10394369 3300026116 Bacteria 1338
165 Ga0207675_100374813 3300026118 Bacteria 1398
166 Ga0207698_10007406 3300026142 Bacteria 6876
167 Ga0207698_10285966 3300026142 Bacteria 1527
168 Ga0268266_10001569 3300028379 Bacteria 26708
169 Ga0268265_10228434 3300028380 Unclassified 1634
170 Ga0268264_10424388 3300028381 Unclassified 1283
171 Ga0265326_10006750 3300028558 Bacteria 3546
172 Ga0265334_10029513 3300028573 Bacteria 2200
173 Ga0265322_10009452 3300028654 Bacteria 2832
174 Ga0265322_10024178 3300028654 Bacteria 1737
175 Ga0265338_10006232 3300028800 Bacteria 15268
176 Ga0265338_10044738 3300028800 Bacteria 4082
177 Ga0265338_10226929 3300028800 Bacteria 1391
178 Ga0265320_10045550 3300031240 Bacteria 2155
179 Ga0265325_10057741 3300031241 Bacteria 1978
180 Ga0265325_10079790 3300031241 Bacteria 1628
181 Ga0265339_10042718 3300031249 Bacteria 2509
182 Ga0265331_10095707 3300031250 Bacteria 1370
183 Ga0265327_10001233 3300031251 Bacteria 34340
184 Ga0265327_10041972 3300031251 Bacteria 2460
185 Ga0265327_10068099 3300031251 Bacteria 1791
186 Ga0265316_10060590 3300031344 Bacteria 2941
187 Ga0265316_10095656 3300031344 Bacteria 2262
188 Ga0265313_10002855 3300031595 Bacteria 14494
189 Ga0265314_10028367 3300031711 Bacteria 4174
190 Ga0265314_10065826 3300031711 Bacteria 2446
191 Ga0316576_10008239 3300031727 Bacteria 6630
192 Ga0316576_10036170 3300031727 Bacteria 3529
193 Ga0316576_10482289 3300031727 Bacteria 913
194 Ga0316578_10133072 3300031728 Bacteria 1497
195 Ga0307405_10002138 3300031731 Bacteria 8612
196 Ga0316577_10036317 3300031733 Bacteria 2756
197 Ga0307413_10071423 3300031824 Bacteria 2187
198 Ga0307410_10008856 3300031852 Bacteria 5611
199 Ga0307407_10133480 3300031903 Bacteria 1592
200 Ga0307412_10014822 3300031911 Bacteria 4607
201 Ga0307409_100263877 3300031995 Bacteria 1582
202 Ga0307409_100474112 3300031995 Unclassified 1213
203 Ga0307411_10002156 3300032005 Bacteria 8542
204 Ga0307411_10352538 3300032005 Bacteria 1200
205 Ga0316583_10016610 3300032133 Bacteria 2648
206 Ga0373955_0112350 3300035172 Bacteria 1576
207 Ga0316574_0070920 3300035398 Unclassified 2200
208 Ga0373935_0215070 3300035692 Bacteria 1333
209 Ga0373933_0072957 3300035724 Bacteria 2091
210 Ga0316582_0297544 3300036647 Bacteria 1108
211 Ga0316584_0027672 3300036712 Bacteria 4174
212 Ga0316584_0058159 3300036712 Bacteria 2895
213 Ga0373925_0047794 3300037068 Bacteria 3187
214 Ga0395901_0567129 3300038443 Unclassified 1149
215 Ga0436365_1752940 3300039437 Bacteria 3190
216 Ga0436365_1814719 3300039437 Bacteria 3142
217 Ga0436360_0907501 3300039438 Bacteria 2261
218 Ga0436363_0738270 3300039450 Unclassified 1295
219 Ga0436362_0613546 3300039453 Bacteria 1082
220 Ga0436362_1088026 3300039453 Bacteria 4358
221 Ga0451577_0030122 3300042876 Bacteria 4904
222 Ga0495603_0166924 3300046455 Bacteria 1276
223 Ga0495608_0026840 3300046511 Bacteria 3924
224 Ga0495588_0063507 3300046674 Bacteria 1915
225 Ga0495658_0100007 3300046683 Bacteria 1730
226 Ga0495604_0216008 3300047317 Bacteria 1323
227 Ga0495684_0284057 3300047471 Bacteria 1193
228 Ga0495614_0168794 3300048089 Bacteria 981
229 Ga0496100_0346565 3300048903 Bacteria 1121
230 Ga0496101_0387353 3300048904 Bacteria 1100
231 Ga0496104_0024790 3300048907 Bacteria 5523
232 Ga0496104_0111837 3300048907 Bacteria 2619
233 Ga0496104_0226767 3300048907 Bacteria 1781
234 Ga0496104_0594451 3300048907 Bacteria 1017
235 Ga0496105_0030151 3300048908 Bacteria 4444
236 Ga0496105_0206085 3300048908 Bacteria 1604
237 Ga0496108_0234848 3300048911 Bacteria 1595
238 Ga0496108_0245219 3300048911 Bacteria 1558
239 Ga0496108_0265641 3300048911 Bacteria 1493
240 Ga0496108_0521730 3300048911 Bacteria 1037
241 Ga0496109_0050476 3300048912 Bacteria 3789
242 Ga0496109_0163609 3300048912 Bacteria 2085
243 Ga0496109_0173091 3300048912 Bacteria 2026
244 Ga0496109_0334516 3300048912 Bacteria 1430
245 Ga0496109_0413105 3300048912 Bacteria 1275
246 Ga0496110_0045228 3300048913 Bacteria 3847
247 Ga0496110_0314571 3300048913 Bacteria 1426
248 Ga0496111_0048380 3300048914 Bacteria 3063
249 Ga0496111_0223315 3300048914 Bacteria 1399
250 Ga0496112_0000012 3300048915 Bacteria 243643
251 Ga0496112_0006567 3300048915 Bacteria 10235
252 Ga0496112_0031809 3300048915 Bacteria 5119
253 Ga0496113_0106120 3300048916 Bacteria 2181
254 Ga0496114_0226668 3300048917 Bacteria 1641
255 Ga0496114_0485658 3300048917 Bacteria 1093
256 Ga0501033_0006610 3300049570 Bacteria 9067
257 Ga0501034_0492566 3300049571 Bacteria 1140
258 Ga0501047_0054603 3300049581 Bacteria 3864
259 Ga0501047_0197594 3300049581 Bacteria 1873
260 Ga0501072_0266156 3300049588 Bacteria 1364
261 Ga0501044_0004590 3300049823 Bacteria 15446
262 nmdc:mga03683_41951_c1 3300050489 Bacteria 1880
263 nmdc:mga03683_66329_c1 3300050489 Bacteria 1534
264 nmdc:mga03n38_61396_c1 3300050490 Bacteria 1712
265 nmdc:mga03n38_92903_c1 3300050490 Bacteria 1440
266 nmdc:mga00v17_150410_c1 3300050491 Bacteria 1496
267 nmdc:mga00v17_326219_c1 3300050491 Bacteria 997
268 nmdc:mga00v17_868_c1 3300050491 Bacteria 16332
269 nmdc:mga0yw44_15127_c1 3300050492 Bacteria 4123
270 nmdc:mga0yw44_247850_c1 3300050492 Bacteria 1185
271 nmdc:mga06z11_100342_c1 3300050494 Bacteria 1587
272 nmdc:mga06z11_11339_c1 3300050494 Bacteria 3841
273 nmdc:mga06z11_142866_c1 3300050494 Bacteria 1354
274 nmdc:mga07m45_227138_c1 3300050496 Bacteria 1086
275 nmdc:mga05p37_429807_c1 3300050507 Bacteria 1534
276 nmdc:mga05p37_98041_c2 3300050507 Bacteria 2673
277 nmdc:mga09592_46372_c1 3300050508 Bacteria 3662
278 nmdc:mga09592_49414_c1 3300050508 Bacteria 3546
279 nmdc:mga0qj67_49769_c1 3300050509 Bacteria 3312
280 nmdc:mga06r32_101727_c1 3300050510 Bacteria 2820
281 nmdc:mga06r32_297995_c1 3300050510 Bacteria 1599
282 nmdc:mga06r32_38050_c1 3300050510 Bacteria 4555
283 nmdc:mga06r32_99493_c1 3300050510 Bacteria 2852
284 nmdc:mga08y16_345911_c1 3300050511 Unclassified 1528
285 nmdc:mga08y16_47604_c1 3300050511 Bacteria 4488
286 nmdc:mga0n895_531416_c1 3300050512 Bacteria 1183
287 nmdc:mga0n895_69555_c1 3300050512 Bacteria 3488
288 nmdc:mga0rr50_23724_c1 3300050513 Bacteria 4237
289 nmdc:mga0rr50_268805_c1 3300050513 Bacteria 1420
290 nmdc:mga0rr50_95363_c1 3300050513 Bacteria 2325
291 nmdc:mga08x19_79931_c1 3300050514 Bacteria 2145
292 nmdc:mga0a205_19618_c1 3300050515 Bacteria 6377
293 nmdc:mga0a205_622754_c1 3300050515 Bacteria 931
294 Ga0495601_0073214 3300053077 Bacteria 2190
295 Ga0495595_0036876 3300053084 Bacteria 2221
296 Ga0495619_0091529 3300053085 Bacteria 2059
297 Ga0500644_0087633 3300053088 Bacteria 1158
298 Ga0500647_0027006 3300053091 Bacteria 2711
299 Ga0500566_0000044 3300053094 Bacteria 61711
300 Ga0500595_024359 3300053119 Bacteria 2113
301 Ga0500588_0000748 3300053146 Bacteria 5560
302 Ga0500616_0000171 3300053153 Bacteria 108118
303 Ga0500616_0001818 3300053153 Bacteria 19382
304 Ga0501084_0000374 3300054114 Bacteria 34306
305 8002286745 8002285264 Bacteria 6717907
306 Ga0496110_0521961
307 JGI24736J21556_1000216
308 JGI24740J21852_10000753
309 JGI24739J22299_10001095
310 JGI24737J22298_10001971
311 JGI24735J21928_10001812
312 JGI24738J21930_10000198
313 Ga0070658_10004234
314 Ga0070666_10214635
315 Ga0070682_100162680
316 Ga0070660_100017070
317 Ga0070660_100637702
318 Ga0070661_100009082
319 Ga0070668_100244565
320 Ga0070668_100447210
321 Ga0070669_100000526
322 Ga0070669_100643878
323 Ga0070675_100102985
324 Ga0070713_100115839
325 Ga0070705_100374065
326 Ga0070708_100046938
327 Ga0070708_100119184
328 Ga0070708_100135451
329 Ga0070663_100029868
330 Ga0070662_100000359
331 Ga0070662_100065387
332 Ga0070706_100000819
333 Ga0070706_100042977
334 Ga0070706_100105656
335 Ga0070706_100152000
336 Ga0070707_100209526
337 Ga0070707_100683723
338 Ga0070699_100646835
339 Ga0068853_100073398
340 Ga0070672_100061671
341 Ga0070696_100038212
342 Ga0070696_100284209
343 Ga0070665_100012912
344 Ga0070665_100215585
345 Ga0070704_100219552
346 Ga0068855_100093591
347 Ga0068855_100176817
348 Ga0070664_100023572
349 Ga0068857_100426273
350 Ga0068854_100006795
351 Ga0068856_100015849
352 Ga0068856_100688446
353 Ga0068852_100005187
354 Ga0068859_100614226
355 Ga0068864_100217611
356 Ga0068851_10001527
357 Ga0068858_100004630
358 Ga0068858_100005960
359 Ga0068858_100051064
360 Ga0068860_100228342
361 Ga0068862_100276620
362 Ga0075368_10058367
363 Ga0075363_100010918
364 Ga0075363_100137145
365 Ga0075364_10002496
366 Ga0075364_10003460
367 Ga0075364_10025146
368 Ga0075364_10077256
369 Ga0075364_10215313
370 Ga0075362_10011643
371 Ga0075362_10013091
372 Ga0075370_10023420
373 Ga0075370_10051398
374 Ga0075370_10169166
375 Ga0075370_10355860
376 Ga0075428_100043616
377 Ga0075428_100135602
378 Ga0075428_100631465
379 Ga0075430_100022427
380 Ga0075430_100240956
381 Ga0075430_100276652
382 Ga0075430_100455533
383 Ga0075431_100091131
384 Ga0075431_100153743
385 Ga0075431_100415587
386 Ga0075433_10001756
387 Ga0075434_100024866
388 Ga0075434_100071650
389 Ga0075429_100014429
390 Ga0075429_100025265
391 Ga0075436_100049705
392 Ga0097620_100614080
393 Ga0075435_100013635
394 Ga0105240_10060720
395 Ga0105240_10123522
396 Ga0105240_10159439
397 Ga0111539_10075662
398 Ga0111539_10436473
399 Ga0105245_10488305
400 Ga0105247_10293834
401 Ga0105243_10160148
402 Ga0105243_10163021
403 Ga0105241_10088647
404 Ga0105248_10369023
405 Ga0105248_10700547
406 Ga0105237_10024713
407 Ga0105238_10009419
408 Ga0105238_10189003
409 Ga0105238_10257389
410 Ga0105239_10168183
411 Ga0105239_10818058
412 Ga0157370_10044460
413 Ga0157369_10004253
414 Ga0157369_10494602
415 Ga0157374_10530625
416 Ga0157378_10791531
417 Ga0163162_10189878
418 Ga0163162_10878203
419 Ga0163163_10089648
420 Ga0213876_10027524
421 Ga0207656_10002792
422 Ga0207680_10130148
423 Ga0207647_10002462
424 Ga0207645_10179547
425 Ga0207705_10054221
426 Ga0207684_10016868
427 Ga0207684_10046735
428 Ga0207684_10051805
429 Ga0207684_10106758
430 Ga0207684_10141036
431 Ga0207654_10000434
432 Ga0207695_10010663
433 Ga0207695_10086911
434 Ga0207695_10160018
435 Ga0207695_10190712
436 Ga0207695_10365764
437 Ga0207671_10000945
438 Ga0207657_10096439
439 Ga0207646_10108223
440 Ga0207646_10253651
441 Ga0207646_10502099
442 Ga0207681_10000483
443 Ga0207681_10151802
444 Ga0207681_10250498
445 Ga0207694_10002374
446 Ga0207694_10006161
447 Ga0207700_10101552
448 Ga0207706_10003889
449 Ga0207709_10178461
450 Ga0207665_10255856
451 Ga0207691_10081997
452 Ga0207679_10278920
453 Ga0207667_10005650
454 Ga0207667_10010140
455 Ga0207667_10163541
456 Ga0207668_10206040
457 Ga0207668_10429191
458 Ga0207640_10017937
459 Ga0207703_10003323
460 Ga0207703_10067117
461 Ga0207703_10191049
462 Ga0207639_10004511
463 Ga0207678_10010720
464 Ga0207678_10429561
465 Ga0207702_10000484
466 Ga0207648_10373107
467 Ga0207676_10281052
468 Ga0207676_10361990
469 Ga0207674_10394369
470 Ga0207675_100374813
471 Ga0207698_10007406
472 Ga0207698_10285966
473 Ga0268266_10001569
474 Ga0268265_10228434
475 Ga0268264_10424388
476 Ga0265326_10006750
477 Ga0265334_10029513
478 Ga0265322_10009452
479 Ga0265322_10024178
480 Ga0265338_10006232
481 Ga0265338_10044738
482 Ga0265338_10226929
483 Ga0265320_10045550
484 Ga0265325_10057741
485 Ga0265325_10079790
486 Ga0265339_10042718
487 Ga0265331_10095707
488 Ga0265327_10001233
489 Ga0265327_10041972
490 Ga0265327_10068099
491 Ga0265316_10060590
492 Ga0265316_10095656
493 Ga0265313_10002855
494 Ga0265314_10028367
495 Ga0265314_10065826
496 Ga0316576_10008239
497 Ga0316576_10036170
498 Ga0316576_10482289
499 Ga0316578_10133072
500 Ga0307405_10002138
501 Ga0316577_10036317
502 Ga0307413_10071423
503 Ga0307410_10008856
504 Ga0307407_10133480
505 Ga0307412_10014822
506 Ga0307409_100263877
507 Ga0307409_100474112
508 Ga0307411_10002156
509 Ga0307411_10352538
510 Ga0316583_10016610
511 Ga0373955_0112350
512 Ga0316574_0070920
513 Ga0373935_0215070
514 Ga0373933_0072957
515 Ga0316582_0297544
516 Ga0316584_0027672
517 Ga0316584_0058159
518 Ga0373925_0047794
519 Ga0395901_0567129
520 Ga0436365_1752940
521 Ga0436365_1814719
522 Ga0436360_0907501
523 Ga0436363_0738270
524 Ga0436362_0613546
525 Ga0436362_1088026
526 Ga0451577_0030122
527 Ga0495603_0166924
528 Ga0495608_0026840
529 Ga0495588_0063507
530 Ga0495658_0100007
531 Ga0495604_0216008
532 Ga0495684_0284057
533 Ga0495614_0168794
534 Ga0496100_0346565
535 Ga0496101_0387353
536 Ga0496104_0024790
537 Ga0496104_0111837
538 Ga0496104_0226767
539 Ga0496104_0594451
540 Ga0496105_0030151
541 Ga0496105_0206085
542 Ga0496108_0234848
543 Ga0496108_0245219
544 Ga0496108_0265641
545 Ga0496108_0521730
546 Ga0496109_0050476
547 Ga0496109_0163609
548 Ga0496109_0173091
549 Ga0496109_0334516
550 Ga0496109_0413105
551 Ga0496110_0045228
552 Ga0496110_0314571
553 Ga0496111_0048380
554 Ga0496111_0223315
555 Ga0496112_0000012
556 Ga0496112_0006567
557 Ga0496112_0031809
558 Ga0496113_0106120
559 Ga0496114_0226668
560 Ga0496114_0485658
561 Ga0501033_0006610
562 Ga0501034_0492566
563 Ga0501047_0054603
564 Ga0501047_0197594
565 Ga0501072_0266156
566 Ga0501044_0004590
567 nmdc:mga03683_41951_c1
568 nmdc:mga03683_66329_c1
569 nmdc:mga03n38_61396_c1
570 nmdc:mga03n38_92903_c1
571 nmdc:mga00v17_150410_c1
572 nmdc:mga00v17_326219_c1
573 nmdc:mga00v17_868_c1
574 nmdc:mga0yw44_15127_c1
575 nmdc:mga0yw44_247850_c1
576 nmdc:mga06z11_100342_c1
577 nmdc:mga06z11_11339_c1
578 nmdc:mga06z11_142866_c1
579 nmdc:mga07m45_227138_c1
580 nmdc:mga05p37_429807_c1
581 nmdc:mga05p37_98041_c2
582 nmdc:mga09592_46372_c1
583 nmdc:mga09592_49414_c1
584 nmdc:mga0qj67_49769_c1
585 nmdc:mga06r32_101727_c1
586 nmdc:mga06r32_297995_c1
587 nmdc:mga06r32_38050_c1
588 nmdc:mga06r32_99493_c1
589 nmdc:mga08y16_345911_c1
590 nmdc:mga08y16_47604_c1
591 nmdc:mga0n895_531416_c1
592 nmdc:mga0n895_69555_c1
593 nmdc:mga0rr50_23724_c1
594 nmdc:mga0rr50_268805_c1
595 nmdc:mga0rr50_95363_c1
596 nmdc:mga08x19_79931_c1
597 nmdc:mga0a205_19618_c1
598 nmdc:mga0a205_622754_c1
599 Ga0495601_0073214
600 Ga0495595_0036876
601 Ga0495619_0091529
602 Ga0500644_0087633
603 Ga0500647_0027006
604 Ga0500566_0000044
605 Ga0500595_024359
606 Ga0500588_0000748
607 Ga0500616_0000171
608 Ga0500616_0001818
609 Ga0501084_0000374
610 8002286745

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

74

234

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
5b47-assembly1.cif.gz_B-2 2-oxoacid:ferredoxin oxidoreductase 2 from sulfolobus tokodai - pyruvate complex 0.91 33 229
5b48-assembly1.cif.gz_D 2-oxoacid:ferredoxin oxidoreductase 1 from sulfolobus tokodai 0.8839 40 224
5b46-assembly1.cif.gz_B-2 2-oxoacid:ferredoxin oxidoreductase 2 from sulfolobus tokodai - ligand free form 0.878 33 229
5b48-assembly1.cif.gz_B 2-oxoacid:ferredoxin oxidoreductase 1 from sulfolobus tokodai 0.8728 29 230
6cin-assembly3.cif.gz_E crystal structure of pyruvate:ferredoxin oxidoreductase from moorella thermoacetica 0.8098 32 227
ID Description Score Start End Superfamily
af_Q2FZ04_70_219_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8396 86 244 3.40.50.970
af_Q2FZ04_70_219_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8036 86 244 3.40.50.970
af_Q57957_74_243_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.786 89 253 3.40.50.970
af_P52647_794_1167_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.7725 25 228 3.40.50.970
af_O53181_117_260_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.7713 95 250 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A7V2LFI7-F1-model_v4 Thiamine pyrophosphate enzyme TPP-binding domain-containing protein 0.9778 31 258 GO:0016625
GO:0030976
AF-A0A7X7KKN9-F1-model_v4 MFS transporter 0.9771 31 245 GO:0016625
GO:0030976
AF-A0A497CZJ0-F1-model_v4 2-oxoglutarate oxidoreductase 0.9743 33 257 GO:0016625
GO:0030976
AF-A0A7X8UL37-F1-model_v4 2-oxoglutarate oxidoreductase 0.9736 47 259 GO:0000287
GO:0016625
GO:0030976
AF-Q7MTX1-F1-model_v4 2-oxoglutarate oxidoreductase, beta subunit 0.973 30 257 GO:0016625
GO:0030976

Map