F398028

General Info

Members Datasets Scaffolds Average Seq Length
305 185 610 242

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100000142|Ga0068859_10000014240
Length 282
Sequence MTTQGRGPRRAGRPSASRDEDSGGTVRDFPDGPVDDDGLTPRQRKVLEVIRNAVERRGYPPSVREIGEAVGLTSTSSVAHQLKMLEDKGLLRRDPNRPRAIEVVSPDGRRPVRPIPKSRQAAGTSRARGGAGPLRVHTLGSADDALAREGSDEDMLTAATAYVPLVGRIAAGGPILAEQAVEDVLPLPRDIVGEGTLFLLRVVGDSMINAAICDGDLVAVRQQPVAENGEIVAALIDGEATVKRLRRRDGHVWLQPENPAFQDIAGDDATILGRVVAVMRRV

Samples

Sample ID Description Type Environment
1 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
64 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
65 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
69 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
77 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
78 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
79 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
80 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
81 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
82 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
83 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
84 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
87 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
91 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
92 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
93 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
94 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
95 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
100 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
101 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
102 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
103 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
104 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
105 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
106 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
107 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
111 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
112 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
117 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
120 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
121 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
124 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
125 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
126 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
143 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
159 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
160 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
163 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
164 2506783011 Frankia datiscae Dg1 Isolate Nodule
165 2508501039 Frankia saprophytica CN3 Isolate Nodule
166 2517572101 Frankia sp. DC12 Isolate Nodule
167 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
168 2619618881 Frankia sp. ACN1ag Isolate Unclassified
169 2619619003 Frankia sp. CpI1-P Isolate Nodule
170 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
171 2626541554 Frankia sp. AvcI.1 Isolate Nodule
172 2671180195 Frankia sp. CcI49 Isolate Nodule
173 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
174 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
175 2687453737 Frankia sp. BMG5.36 Isolate Nodule
176 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
177 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
178 2773857922 Frankia sp. CcI49 Isolate Nodule
179 2773857933 Frankia sp. BMG5.30 Isolate Nodule
180 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
181 8002775197 Frankia nepalensis CN7 Isolate Nodule
182 8002784119 Frankia sp. AgB1.9 Isolate Nodule
183 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
184 8054920844 Frankia tisae Agncl-8 Isolate Nodule
185 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.79
Metatranscriptomes 0
Isolates 7.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.31
Nodule 5.57
Rhizoplane 12.79
Rhizosphere 73.11
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068859_100000142 3300005617 Bacteria 67642
2 JGI25406J46586_10004618 3300003203 Bacteria 6409
3 Ga0070658_10007705 3300005327 Bacteria 8678
4 Ga0070658_10291449 3300005327 Bacteria 1391
5 Ga0070658_10434933 3300005327 Bacteria 1129
6 Ga0070670_100539667 3300005331 Bacteria 1040
7 Ga0070682_100167839 3300005337 Bacteria 1523
8 Ga0070682_100568329 3300005337 Bacteria 890
9 Ga0070668_100797194 3300005347 Bacteria 839
10 Ga0070671_100325240 3300005355 Bacteria 1310
11 Ga0070713_100226489 3300005436 Bacteria 1698
12 Ga0070706_100618441 3300005467 Bacteria 1006
13 Ga0070679_100262705 3300005530 Bacteria 1681
14 Ga0070684_100352090 3300005535 Bacteria 1355
15 Ga0070695_100309256 3300005545 Bacteria 1171
16 Ga0070665_100579374 3300005548 Bacteria 1135
17 Ga0068855_100027834 3300005563 Bacteria 6761
18 Ga0068855_100035701 3300005563 Bacteria 5922
19 Ga0068856_100277232 3300005614 Bacteria 1693
20 Ga0068859_100000555 3300005617 Bacteria 37087
21 Ga0068859_100066351 3300005617 Bacteria 3644
22 Ga0068864_100431008 3300005618 Bacteria 1258
23 Ga0068863_100000212 3300005841 Bacteria 62194
24 Ga0068862_100000161 3300005844 Bacteria 74751
25 Ga0081455_10041920 3300005937 Bacteria 4021
26 Ga0081539_10011814 3300005985 Bacteria 6834
27 Ga0075430_100225535 3300006846 Bacteria 1554
28 Ga0075431_100165898 3300006847 Bacteria 2270
29 Ga0097620_100000142 3300006931 Bacteria 67642
30 Ga0097620_100000555 3300006931 Bacteria 37087
31 Ga0097620_100066351 3300006931 Bacteria 3644
32 Ga0105240_10151720 3300009093 Bacteria 2759
33 Ga0105245_10014552 3300009098 Bacteria 6850
34 Ga0105245_10227086 3300009098 Bacteria 1804
35 Ga0105245_10519359 3300009098 Bacteria 1209
36 Ga0105247_10000014 3300009101 Bacteria 285043
37 Ga0105247_10006666 3300009101 Bacteria 7127
38 Ga0105241_10076688 3300009174 Bacteria 2607
39 Ga0105241_10202140 3300009174 Bacteria 1660
40 Ga0105248_10000072 3300009177 Bacteria 117576
41 Ga0105248_10000579 3300009177 Bacteria 41726
42 Ga0105237_10068538 3300009545 Bacteria 3541
43 Ga0105238_10734608 3300009551 Bacteria 1000
44 Ga0105249_10002371 3300009553 Bacteria 16353
45 Ga0105239_10477164 3300010375 Bacteria 1417
46 Ga0105239_10983581 3300010375 Bacteria 970
47 Ga0105239_11358075 3300010375 Bacteria 820
48 Ga0105246_10255232 3300011119 Bacteria 1394
49 Ga0157369_10086186 3300013105 Bacteria 3355
50 Ga0157374_10572452 3300013296 Bacteria 1138
51 Ga0157372_10262636 3300013307 Bacteria 2005
52 Ga0157372_10311234 3300013307 Bacteria 1833
53 Ga0157375_10207012 3300013308 Bacteria 2118
54 Ga0163163_10023814 3300014325 Bacteria 5818
55 Ga0163163_10024796 3300014325 Bacteria 5711
56 Ga0157380_10951449 3300014326 Bacteria 889
57 Ga0157379_10006742 3300014968 Bacteria 9922
58 Ga0157376_10102599 3300014969 Bacteria 2502
59 Ga0157376_10814114 3300014969 Bacteria 947
60 Ga0213875_10001064 3300021388 Bacteria 19245
61 Ga0207710_10000031 3300025900 Bacteria 285157
62 Ga0207688_10161658 3300025901 Bacteria 1328
63 Ga0207647_10068996 3300025904 Bacteria 2138
64 Ga0207705_10180201 3300025909 Bacteria 1594
65 Ga0207671_10505268 3300025914 Bacteria 964
66 Ga0207687_10008167 3300025927 Bacteria 6850
67 Ga0207687_10286274 3300025927 Bacteria 1323
68 Ga0207711_10000551 3300025941 Bacteria 38248
69 Ga0207711_10005664 3300025941 Bacteria 10555
70 Ga0207661_10494858 3300025944 Bacteria 1117
71 Ga0207667_10020238 3300025949 Bacteria 7405
72 Ga0207667_10158858 3300025949 Bacteria 2326
73 Ga0207712_10006654 3300025961 Bacteria 7294
74 Ga0207640_10669934 3300025981 Bacteria 886
75 Ga0207641_10002188 3300026088 Bacteria 18392
76 Ga0207683_10158363 3300026121 Bacteria 2046
77 Ga0207683_10286555 3300026121 Bacteria 1506
78 Ga0268266_10519072 3300028379 Bacteria 1139
79 Ga0268265_10000019 3300028380 Bacteria 285487
80 Ga0307515_10050610 3300028794 Bacteria 6216
81 Ga0265327_10080784 3300031251 Bacteria 1607
82 Ga0265327_10122838 3300031251 Bacteria 1228
83 Ga0307408_100378043 3300031548 Bacteria 1210
84 Ga0307408_100715131 3300031548 Bacteria 901
85 Ga0307405_10236275 3300031731 Bacteria 1351
86 Ga0307413_10183273 3300031824 Bacteria 1495
87 Ga0307410_10011505 3300031852 Bacteria 5066
88 Ga0307406_10037205 3300031901 Bacteria 3004
89 Ga0307406_10047387 3300031901 Bacteria 2709
90 Ga0307406_10175980 3300031901 Bacteria 1553
91 Ga0307407_10106367 3300031903 Bacteria 1752
92 Ga0307407_10224804 3300031903 Bacteria 1271
93 Ga0307409_100083019 3300031995 Bacteria 2596
94 Ga0307409_100169100 3300031995 Bacteria 1922
95 Ga0307409_100205082 3300031995 Bacteria 1767
96 Ga0307409_100781900 3300031995 Bacteria 961
97 Ga0307416_100015399 3300032002 Bacteria 5282
98 Ga0307416_100031616 3300032002 Bacteria 3987
99 Ga0307416_100199444 3300032002 Bacteria 1897
100 Ga0307416_100618641 3300032002 Bacteria 1165
101 Ga0307411_10286694 3300032005 Bacteria 1313
102 Ga0307415_100026534 3300032126 Bacteria 3656
103 Ga0307415_100028135 3300032126 Bacteria 3571
104 Ga0307415_100066312 3300032126 Bacteria 2519
105 Ga0307415_100338598 3300032126 Bacteria 1261
106 Ga0373927_0019906 3300035695 Bacteria 4401
107 Ga0395900_0472450 3300037418 Bacteria 1207
108 Ga0395905_0124307 3300037471 Bacteria 2426
109 Ga0436364_0722882 3300037853 Bacteria 28813
110 Ga0395901_0037661 3300038443 Bacteria 5002
111 Ga0395901_0996486 3300038443 Bacteria 814
112 Ga0436365_0330056 3300039437 Bacteria 1587
113 Ga0436365_0461076 3300039437 Bacteria 780
114 Ga0451789_0151028 3300041443 Bacteria 3547
115 Ga0451793_0939933 3300041452 Bacteria 11459
116 Ga0451797_0282808 3300041453 Bacteria 1940
117 Ga0451807_2594461 3300041486 Bacteria 1761
118 Ga0451833_0514220 3300041491 Bacteria 1104
119 Ga0451839_0670902 3300041496 Bacteria 1440
120 Ga0451841_1243049 3300041498 Bacteria 2920
121 Ga0451843_0060375 3300041509 Bacteria 3779
122 Ga0466969_0172023 3300044656 Bacteria 993
123 Ga0466972_0066934 3300044658 Bacteria 1717
124 Ga0466965_0057292 3300044683 Bacteria 1942
125 Ga0466966_0004470 3300044684 Bacteria 9221
126 Ga0466966_0010513 3300044684 Bacteria 6150
127 Ga0466966_0088499 3300044684 Bacteria 1924
128 Ga0466966_0129535 3300044684 Bacteria 1546
129 Ga0466966_0270838 3300044684 Bacteria 1022
130 Ga0466961_0005994 3300044693 Bacteria 7705
131 Ga0466961_0019891 3300044693 Bacteria 4321
132 Ga0466961_0094058 3300044693 Bacteria 1891
133 Ga0466961_0107296 3300044693 Bacteria 1758
134 Ga0466961_0301650 3300044693 Bacteria 978
135 Ga0466963_0000587 3300044694 Bacteria 17322
136 Ga0466963_0010804 3300044694 Bacteria 5543
137 Ga0466963_0061785 3300044694 Bacteria 2505
138 Ga0466963_0086838 3300044694 Bacteria 2126
139 Ga0466963_0129729 3300044694 Bacteria 1740
140 Ga0466963_0201282 3300044694 Bacteria 1393
141 Ga0466964_0153797 3300044706 Bacteria 1069
142 Ga0466964_0158167 3300044706 Bacteria 1057
143 Ga0466971_0010275 3300044719 Bacteria 4089
144 Ga0466971_0068866 3300044719 Bacteria 1605
145 Ga0466971_0071062 3300044719 Bacteria 1581
146 Ga0466971_0100545 3300044719 Bacteria 1328
147 Ga0466968_0239363 3300044735 Bacteria 859
148 Ga0466970_0016596 3300044765 Bacteria 3799
149 Ga0466970_0065486 3300044765 Bacteria 1950
150 Ga0466957_0010863 3300044842 Bacteria 5236
151 Ga0466957_0016104 3300044842 Bacteria 4369
152 Ga0466957_0083597 3300044842 Bacteria 1992
153 Ga0466957_0427717 3300044842 Bacteria 909
154 Ga0466960_0034794 3300044901 Bacteria 2350
155 Ga0466960_0078571 3300044901 Bacteria 1657
156 Ga0466960_0204641 3300044901 Bacteria 1080
157 Ga0466959_0030683 3300045049 Bacteria 3980
158 Ga0466959_0089909 3300045049 Bacteria 2206
159 Ga0466959_0264493 3300045049 Bacteria 1183
160 Ga0466958_0004447 3300045836 Bacteria 7401
161 Ga0466958_0025192 3300045836 Bacteria 3505
162 Ga0466958_0044889 3300045836 Bacteria 2664
163 Ga0466958_0276209 3300045836 Bacteria 1076
164 Ga0466967_0019438 3300045976 Bacteria 5461
165 Ga0466967_0039347 3300045976 Bacteria 4064
166 Ga0466967_0046130 3300045976 Bacteria 3792
167 Ga0466967_0055163 3300045976 Bacteria 3500
168 Ga0466967_0061658 3300045976 Bacteria 3328
169 Ga0466967_0083267 3300045976 Bacteria 2892
170 Ga0466967_0144361 3300045976 Bacteria 2219
171 Ga0466967_0203727 3300045976 Bacteria 1874
172 Ga0466967_0288006 3300045976 Bacteria 1577
173 Ga0466967_0391877 3300045976 Bacteria 1350
174 Ga0466967_0431674 3300045976 Bacteria 1285
175 Ga0466967_0455780 3300045976 Bacteria 1250
176 Ga0495653_0550276 3300046463 Bacteria 714
177 Ga0495662_0140258 3300046476 Bacteria 1190
178 Ga0495662_0228770 3300046476 Bacteria 917
179 Ga0495664_0107373 3300046477 Bacteria 1684
180 Ga0495664_0324892 3300046477 Bacteria 928
181 Ga0495594_0299557 3300046499 Bacteria 916
182 Ga0495608_0042522 3300046511 Bacteria 3039
183 Ga0495618_0044104 3300046514 Bacteria 2813
184 Ga0495628_0024267 3300046516 Bacteria 4966
185 Ga0495628_0038505 3300046516 Bacteria 3827
186 Ga0495628_0077411 3300046516 Bacteria 2587
187 Ga0495628_0543470 3300046516 Bacteria 835
188 Ga0495630_0060459 3300046517 Bacteria 2844
189 Ga0495630_0068506 3300046517 Bacteria 2669
190 Ga0495648_0020657 3300046524 Bacteria 4585
191 Ga0495640_0010397 3300046533 Bacteria 7198
192 Ga0495640_0118157 3300046533 Bacteria 1726
193 Ga0495586_0393400 3300046535 Bacteria 797
194 Ga0495621_0106756 3300046539 Bacteria 1071
195 Ga0495645_0256825 3300046543 Bacteria 1159
196 Ga0495622_0035496 3300046557 Bacteria 2325
197 Ga0495667_0047109 3300046559 Bacteria 2849
198 Ga0495667_0153076 3300046559 Bacteria 1484
199 Ga0495667_0243352 3300046559 Bacteria 1145
200 Ga0495634_0128850 3300046642 Bacteria 1615
201 Ga0495635_0143469 3300046663 Bacteria 1626
202 Ga0495635_0252034 3300046663 Bacteria 1190
203 Ga0495657_0060590 3300046675 Bacteria 2507
204 Ga0495599_0214226 3300046678 Bacteria 1180
205 Ga0495658_0012124 3300046683 Bacteria 4355
206 Ga0495658_0222669 3300046683 Bacteria 1182
207 Ga0495669_0005148 3300046684 Bacteria 5439
208 Ga0495613_0192695 3300046689 Bacteria 1440
209 Ga0495649_0312421 3300046694 Bacteria 799
210 Ga0495674_0217336 3300047319 Bacteria 1581
211 Ga0495674_0239331 3300047319 Bacteria 1496
212 Ga0495676_0302721 3300047321 Bacteria 1078
213 Ga0495684_0162766 3300047471 Bacteria 1663
214 Ga0495593_0136064 3300047673 Bacteria 1246
215 Ga0496100_0273438 3300048903 Bacteria 1257
216 Ga0496101_0130697 3300048904 Bacteria 1907
217 Ga0496101_0518553 3300048904 Bacteria 942
218 Ga0496102_0000094 3300048905 Bacteria 125159
219 Ga0496102_0035628 3300048905 Bacteria 4480
220 Ga0496102_0954741 3300048905 Bacteria 778
221 Ga0496103_0000042 3300048906 Bacteria 168701
222 Ga0496104_0008887 3300048907 Bacteria 8927
223 Ga0496104_0195164 3300048907 Bacteria 1937
224 Ga0496104_0238128 3300048907 Bacteria 1732
225 Ga0496104_0495912 3300048907 Bacteria 1132
226 Ga0496105_0016026 3300048908 Bacteria 5979
227 Ga0496105_0258741 3300048908 Bacteria 1408
228 Ga0496105_0409166 3300048908 Bacteria 1076
229 Ga0496107_0622421 3300048910 Bacteria 797
230 Ga0496108_0001567 3300048911 Bacteria 18102
231 Ga0496108_0084271 3300048911 Bacteria 2697
232 Ga0496108_0128924 3300048911 Bacteria 2174
233 Ga0496108_0183894 3300048911 Bacteria 1810
234 Ga0496109_0064669 3300048912 Bacteria 3348
235 Ga0496109_0110099 3300048912 Bacteria 2560
236 Ga0496109_0297132 3300048912 Bacteria 1523
237 Ga0496109_0342744 3300048912 Bacteria 1411
238 Ga0496109_0382880 3300048912 Bacteria 1329
239 Ga0496111_0010810 3300048914 Bacteria 6135
240 Ga0496112_0254550 3300048915 Bacteria 1706
241 Ga0496112_0526021 3300048915 Bacteria 1117
242 Ga0496113_0172926 3300048916 Bacteria 1711
243 Ga0496113_0368556 3300048916 Bacteria 1153
244 Ga0496114_0000468 3300048917 Bacteria 29550
245 Ga0496114_0019822 3300048917 Bacteria 5454
246 Ga0496114_0048512 3300048917 Bacteria 3532
247 Ga0496114_0234211 3300048917 Bacteria 1614
248 Ga0496114_0348161 3300048917 Bacteria 1310
249 Ga0496114_0571172 3300048917 Bacteria 998
250 Ga0496116_0000406 3300048919 Bacteria 62016
251 Ga0496117_0010942 3300048920 Bacteria 8176
252 Ga0496117_0093926 3300048920 Bacteria 1922
253 Ga0496118_0002089 3300048921 Bacteria 28088
254 Ga0496118_0156414 3300048921 Bacteria 1417
255 Ga0496119_0006345 3300048922 Bacteria 11003
256 Ga0496119_0013793 3300048922 Bacteria 6394
257 Ga0496119_0022526 3300048922 Bacteria 4506
258 Ga0496120_0002996 3300048923 Bacteria 16039
259 Ga0496121_0019387 3300048924 Bacteria 6802
260 Ga0501036_0572291 3300049572 Bacteria 938
261 Ga0501038_0259229 3300049574 Bacteria 1375
262 Ga0501047_0478023 3300049581 Bacteria 1074
263 Ga0501070_0034515 3300049586 Bacteria 4229
264 Ga0501070_0377162 3300049586 Bacteria 1149
265 Ga0501074_0588710 3300049590 Bacteria 787
266 Ga0501075_0262048 3300049591 Bacteria 1318
267 Ga0501083_0253394 3300049744 Bacteria 1146
268 Ga0501044_0048224 3300049823 Bacteria 4401
269 nmdc:mga0qj67_224852_c1 3300050509 Bacteria 1523
270 nmdc:mga06r32_1354_c1 3300050510 Bacteria 22110
271 Ga0495601_0139798 3300053077 Bacteria 1579
272 Ga0495612_0061473 3300053078 Bacteria 1556
273 Ga0495612_0159024 3300053078 Bacteria 986
274 Ga0495619_0021927 3300053085 Bacteria 4083
275 Ga0495619_0184071 3300053085 Bacteria 1445
276 Ga0495619_0300855 3300053085 Bacteria 1111
277 Ga0500655_049292 3300053133 Bacteria 837
278 Ga0500568_0002039 3300053139 Bacteria 12281
279 Ga0500589_047924 3300053147 Bacteria 1988
280 Ga0500616_0006597 3300053153 Bacteria 7567
281 Ga0466962_0017041 3300061719 Bacteria 3500
282 Ga0466962_0122469 3300061719 Bacteria 1255
283 Ga0530510_0457123 3300061734 Bacteria 966
284 2506868163 2506783011 Bacteria 5323186
285 2508677283 2508501039 Bacteria 9978592
286 2517760308 2517572101 Bacteria 6884336
287 2579853118 2579778521 Bacteria 7624758
288 2619855875 2619618881 Bacteria 7521104
289 2620348317 2619619003 Bacteria 7619552
290 2623498193 2622736605 Bacteria 4992138
291 2626635368 2626541554 Bacteria 7741902
292 2671835053 2671180195 Bacteria 9757215
293 2676200272 2675902999 Bacteria 9438463
294 2686535797 2684623035 Bacteria 8032739
295 2689960172 2687453737 Bacteria 11203906
296 2689990873 2687453743 Bacteria 8361025
297 2774844850 2773857921 Bacteria 9435764
298 2774853209 2773857922 Bacteria 9757215
299 2774902586 2773857933 Bacteria 5818019
300 2895889876 2895880812 Bacteria 11255272
301 8002776259 8002775197 Bacteria 10728764
302 8002792215 8002784119 Bacteria 9788632
303 8054915897 8054913762 Bacteria 7713009
304 8054921180 8054920844 Bacteria 7068637
305 8055163089 8055157932 Bacteria 6429399
306 Ga0068859_100000142
307 JGI25406J46586_10004618
308 Ga0070658_10007705
309 Ga0070658_10291449
310 Ga0070658_10434933
311 Ga0070670_100539667
312 Ga0070682_100167839
313 Ga0070682_100568329
314 Ga0070668_100797194
315 Ga0070671_100325240
316 Ga0070713_100226489
317 Ga0070706_100618441
318 Ga0070679_100262705
319 Ga0070684_100352090
320 Ga0070695_100309256
321 Ga0070665_100579374
322 Ga0068855_100027834
323 Ga0068855_100035701
324 Ga0068856_100277232
325 Ga0068859_100000555
326 Ga0068859_100066351
327 Ga0068864_100431008
328 Ga0068863_100000212
329 Ga0068862_100000161
330 Ga0081455_10041920
331 Ga0081539_10011814
332 Ga0075430_100225535
333 Ga0075431_100165898
334 Ga0097620_100000142
335 Ga0097620_100000555
336 Ga0097620_100066351
337 Ga0105240_10151720
338 Ga0105245_10014552
339 Ga0105245_10227086
340 Ga0105245_10519359
341 Ga0105247_10000014
342 Ga0105247_10006666
343 Ga0105241_10076688
344 Ga0105241_10202140
345 Ga0105248_10000072
346 Ga0105248_10000579
347 Ga0105237_10068538
348 Ga0105238_10734608
349 Ga0105249_10002371
350 Ga0105239_10477164
351 Ga0105239_10983581
352 Ga0105239_11358075
353 Ga0105246_10255232
354 Ga0157369_10086186
355 Ga0157374_10572452
356 Ga0157372_10262636
357 Ga0157372_10311234
358 Ga0157375_10207012
359 Ga0163163_10023814
360 Ga0163163_10024796
361 Ga0157380_10951449
362 Ga0157379_10006742
363 Ga0157376_10102599
364 Ga0157376_10814114
365 Ga0213875_10001064
366 Ga0207710_10000031
367 Ga0207688_10161658
368 Ga0207647_10068996
369 Ga0207705_10180201
370 Ga0207671_10505268
371 Ga0207687_10008167
372 Ga0207687_10286274
373 Ga0207711_10000551
374 Ga0207711_10005664
375 Ga0207661_10494858
376 Ga0207667_10020238
377 Ga0207667_10158858
378 Ga0207712_10006654
379 Ga0207640_10669934
380 Ga0207641_10002188
381 Ga0207683_10158363
382 Ga0207683_10286555
383 Ga0268266_10519072
384 Ga0268265_10000019
385 Ga0307515_10050610
386 Ga0265327_10080784
387 Ga0265327_10122838
388 Ga0307408_100378043
389 Ga0307408_100715131
390 Ga0307405_10236275
391 Ga0307413_10183273
392 Ga0307410_10011505
393 Ga0307406_10037205
394 Ga0307406_10047387
395 Ga0307406_10175980
396 Ga0307407_10106367
397 Ga0307407_10224804
398 Ga0307409_100083019
399 Ga0307409_100169100
400 Ga0307409_100205082
401 Ga0307409_100781900
402 Ga0307416_100015399
403 Ga0307416_100031616
404 Ga0307416_100199444
405 Ga0307416_100618641
406 Ga0307411_10286694
407 Ga0307415_100026534
408 Ga0307415_100028135
409 Ga0307415_100066312
410 Ga0307415_100338598
411 Ga0373927_0019906
412 Ga0395900_0472450
413 Ga0395905_0124307
414 Ga0436364_0722882
415 Ga0395901_0037661
416 Ga0395901_0996486
417 Ga0436365_0330056
418 Ga0436365_0461076
419 Ga0451789_0151028
420 Ga0451793_0939933
421 Ga0451797_0282808
422 Ga0451807_2594461
423 Ga0451833_0514220
424 Ga0451839_0670902
425 Ga0451841_1243049
426 Ga0451843_0060375
427 Ga0466969_0172023
428 Ga0466972_0066934
429 Ga0466965_0057292
430 Ga0466966_0004470
431 Ga0466966_0010513
432 Ga0466966_0088499
433 Ga0466966_0129535
434 Ga0466966_0270838
435 Ga0466961_0005994
436 Ga0466961_0019891
437 Ga0466961_0094058
438 Ga0466961_0107296
439 Ga0466961_0301650
440 Ga0466963_0000587
441 Ga0466963_0010804
442 Ga0466963_0061785
443 Ga0466963_0086838
444 Ga0466963_0129729
445 Ga0466963_0201282
446 Ga0466964_0153797
447 Ga0466964_0158167
448 Ga0466971_0010275
449 Ga0466971_0068866
450 Ga0466971_0071062
451 Ga0466971_0100545
452 Ga0466968_0239363
453 Ga0466970_0016596
454 Ga0466970_0065486
455 Ga0466957_0010863
456 Ga0466957_0016104
457 Ga0466957_0083597
458 Ga0466957_0427717
459 Ga0466960_0034794
460 Ga0466960_0078571
461 Ga0466960_0204641
462 Ga0466959_0030683
463 Ga0466959_0089909
464 Ga0466959_0264493
465 Ga0466958_0004447
466 Ga0466958_0025192
467 Ga0466958_0044889
468 Ga0466958_0276209
469 Ga0466967_0019438
470 Ga0466967_0039347
471 Ga0466967_0046130
472 Ga0466967_0055163
473 Ga0466967_0061658
474 Ga0466967_0083267
475 Ga0466967_0144361
476 Ga0466967_0203727
477 Ga0466967_0288006
478 Ga0466967_0391877
479 Ga0466967_0431674
480 Ga0466967_0455780
481 Ga0495653_0550276
482 Ga0495662_0140258
483 Ga0495662_0228770
484 Ga0495664_0107373
485 Ga0495664_0324892
486 Ga0495594_0299557
487 Ga0495608_0042522
488 Ga0495618_0044104
489 Ga0495628_0024267
490 Ga0495628_0038505
491 Ga0495628_0077411
492 Ga0495628_0543470
493 Ga0495630_0060459
494 Ga0495630_0068506
495 Ga0495648_0020657
496 Ga0495640_0010397
497 Ga0495640_0118157
498 Ga0495586_0393400
499 Ga0495621_0106756
500 Ga0495645_0256825
501 Ga0495622_0035496
502 Ga0495667_0047109
503 Ga0495667_0153076
504 Ga0495667_0243352
505 Ga0495634_0128850
506 Ga0495635_0143469
507 Ga0495635_0252034
508 Ga0495657_0060590
509 Ga0495599_0214226
510 Ga0495658_0012124
511 Ga0495658_0222669
512 Ga0495669_0005148
513 Ga0495613_0192695
514 Ga0495649_0312421
515 Ga0495674_0217336
516 Ga0495674_0239331
517 Ga0495676_0302721
518 Ga0495684_0162766
519 Ga0495593_0136064
520 Ga0496100_0273438
521 Ga0496101_0130697
522 Ga0496101_0518553
523 Ga0496102_0000094
524 Ga0496102_0035628
525 Ga0496102_0954741
526 Ga0496103_0000042
527 Ga0496104_0008887
528 Ga0496104_0195164
529 Ga0496104_0238128
530 Ga0496104_0495912
531 Ga0496105_0016026
532 Ga0496105_0258741
533 Ga0496105_0409166
534 Ga0496107_0622421
535 Ga0496108_0001567
536 Ga0496108_0084271
537 Ga0496108_0128924
538 Ga0496108_0183894
539 Ga0496109_0064669
540 Ga0496109_0110099
541 Ga0496109_0297132
542 Ga0496109_0342744
543 Ga0496109_0382880
544 Ga0496111_0010810
545 Ga0496112_0254550
546 Ga0496112_0526021
547 Ga0496113_0172926
548 Ga0496113_0368556
549 Ga0496114_0000468
550 Ga0496114_0019822
551 Ga0496114_0048512
552 Ga0496114_0234211
553 Ga0496114_0348161
554 Ga0496114_0571172
555 Ga0496116_0000406
556 Ga0496117_0010942
557 Ga0496117_0093926
558 Ga0496118_0002089
559 Ga0496118_0156414
560 Ga0496119_0006345
561 Ga0496119_0013793
562 Ga0496119_0022526
563 Ga0496120_0002996
564 Ga0496121_0019387
565 Ga0501036_0572291
566 Ga0501038_0259229
567 Ga0501047_0478023
568 Ga0501070_0034515
569 Ga0501070_0377162
570 Ga0501074_0588710
571 Ga0501075_0262048
572 Ga0501083_0253394
573 Ga0501044_0048224
574 nmdc:mga0qj67_224852_c1
575 nmdc:mga06r32_1354_c1
576 Ga0495601_0139798
577 Ga0495612_0061473
578 Ga0495612_0159024
579 Ga0495619_0021927
580 Ga0495619_0184071
581 Ga0495619_0300855
582 Ga0500655_049292
583 Ga0500568_0002039
584 Ga0500589_047924
585 Ga0500616_0006597
586 Ga0466962_0017041
587 Ga0466962_0122469
588 Ga0530510_0457123
589 2506868163
590 2508677283
591 2517760308
592 2579853118
593 2619855875
594 2620348317
595 2623498193
596 2626635368
597 2671835053
598 2676200272
599 2686535797
600 2689960172
601 2689990873
602 2774844850
603 2774853209
604 2774902586
605 2895889876
606 8002776259
607 8002792215
608 8054915897
609 8054921180
610 8055163089

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00717

Peptidase_S24

Peptidase S24-like

164

276

0.99

PF01726

LexA_DNA_bind

LexA DNA binding domain

36

100

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1lea-assembly1.cif.gz_A solution structure of the lexa repressor dna binding determined by 1h nmr spectroscopy 0.9326 21 71
3or1-assembly1.cif.gz_F crystal structure of dissimilatory sulfite reductase i (dsri) 0.9301 22 54
1jhf-assembly1.cif.gz_B lexa g85d mutant 0.9275 150 234
6a2r-assembly1.cif.gz_A mycobacterium tuberculosis lexa c-domain ii 0.9181 136 234
6a2r-assembly1.cif.gz_A mycobacterium tuberculosis lexa c-domain ii 0.9093 136 234
ID Description Score Start End Superfamily
1jhhA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9696 21 71 1.10.10.10
3k2zB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.942 20 75 1.10.10.10
3k2zA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9319 20 75 1.10.10.10
3jspB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9307 21 71 1.10.10.10
1jhfB00 Mainly Beta;Ribbon;Umud Fragment, subunit A;Umud Fragment, subunit A 0.9275 150 234 2.10.109.10
ID Description Score Start End GO Terms
AF-A0A6G3WP58-F1-model_v4 Repressor LexA (EC 3.4.21.88) 0.9952 147 234 GO:0003677
GO:0004252
GO:0006260
GO:0006281
GO:0009432
GO:0045892
AF-A0A7K0KSP1-F1-model_v4 deleted 0.9937 150 234
AF-A0A6P1CZZ1-F1-model_v4 Repressor LexA 0.9897 135 234 GO:0003677
GO:0006281
GO:0006355
GO:0009432
GO:0016787
AF-A0A6G3WP58-F1-model_v4 Repressor LexA (EC 3.4.21.88) 0.9839 147 234 GO:0003677
GO:0004252
GO:0006260
GO:0006281
GO:0009432
GO:0045892
AF-A0A127SHS8-F1-model_v4 LexA: repressor LexA 0.9829 137 234 GO:0003677
GO:0004252
GO:0006260
GO:0006281
GO:0009432
GO:0045892

Map