F397871

General Info

Members Datasets Scaffolds Average Seq Length
304 232 608 393

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8055172936|8055177834
Length 428
Sequence ETYRAEVRGWLEENLSGEFAGARGLGGPGREHEAFDVRLAWERHMAAAGWTCLGWPERYGGRGASVEEQVVFHEEYALARAPARVNHIGENLLGPTIIAFGTDEQRARFLPPIVAAEELWCQGYSEPGAGSDLANVQTRAELVDDHGAVGGQGGGRAAGSERDGGGGSVGGQGGGPRSVGGLDGGEEGGRWRVSGQKVWTSLAMEADWCFVLCRTEPGSARHHGLSYLLVPMRQDGVDIRPIVQMTGTSEFNEVFFDGAVTGAANIIGAPGDGWKIAMATLGFERGVATLGQQVGFRRELEGIIALARETGALDDPLLRDRLVRSWIGLEAMRLNAVRTMAGIAAGAPGPESSISKLVWGTWHRELGELAMDVLGAAGMIADGPPYDLSDEQRLYLFSRADTIYAGSNEIQRNIIAERVLGLPREIRP

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
80 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
83 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
84 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
85 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
88 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
89 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
90 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
91 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
92 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
93 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
98 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
99 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
100 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
101 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
102 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
103 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
104 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
105 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
106 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
107 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
108 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
109 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
110 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
111 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
113 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
114 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
117 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
121 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
122 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
123 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
124 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
125 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
130 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
131 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
132 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
133 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
134 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
135 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
136 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
137 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
138 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
139 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
140 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
141 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
142 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
143 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
144 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
145 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
146 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
147 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
148 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
149 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
150 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
151 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
152 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
153 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
154 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
155 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
156 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
157 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
158 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
159 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
160 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
161 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
162 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
163 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
164 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
165 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
166 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
167 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
168 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
169 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
170 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
171 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
172 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
173 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
174 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
175 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
176 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
177 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
184 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
188 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
189 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
190 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
191 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
192 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
193 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
194 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
196 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
197 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
198 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
199 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
200 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
201 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
202 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
203 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
204 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
205 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
206 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
207 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
208 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
209 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
210 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
211 2558860280 Kutzneria sp. 744 Isolate Unclassified
212 2582580736 Prauserella sp. Am3 Isolate Unclassified
213 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
214 2687453737 Frankia sp. BMG5.36 Isolate Nodule
215 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
216 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
217 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
218 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
219 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
220 2862574272 Streptomyces sp. AcE210 Isolate Nodule
221 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
222 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
223 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
224 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
225 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
226 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
227 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
228 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
229 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
230 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
231 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
232 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.11
Metatranscriptomes 0.33
Isolates 7.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.92
Nodule 0.66
Rhizoplane 5.92
Rhizosphere 78.29
Stem 0
Stem Tuber 0.33
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10066911 3300003316 Bacteria 4765
2 Ga0070658_10011726 3300005327 Bacteria 7030
3 Ga0070690_100045430 3300005330 Bacteria 2790
4 Ga0070680_100000222 3300005336 Bacteria 37623
5 Ga0070687_100030727 3300005343 Bacteria 2628
6 Ga0070668_100002118 3300005347 Bacteria 14517
7 Ga0070668_100061913 3300005347 Bacteria 2899
8 Ga0070674_100133846 3300005356 Bacteria 1852
9 Ga0070659_100114408 3300005366 Bacteria 2180
10 Ga0070667_100007962 3300005367 Bacteria 8787
11 Ga0070667_100045613 3300005367 Bacteria 3686
12 Ga0070667_100261767 3300005367 Bacteria 1549
13 Ga0070709_10000483 3300005434 Bacteria 23483
14 Ga0070714_100016427 3300005435 Bacteria 5976
15 Ga0070713_100055034 3300005436 Bacteria 3304
16 Ga0070710_10042190 3300005437 Bacteria 2521
17 Ga0070711_100229926 3300005439 Bacteria 1445
18 Ga0070705_100102300 3300005440 Bacteria 1812
19 Ga0070708_100149704 3300005445 Bacteria 2170
20 Ga0070663_100002510 3300005455 Bacteria 10353
21 Ga0070681_10000023 3300005458 Bacteria 112399
22 Ga0070707_100052912 3300005468 Bacteria 3892
23 Ga0070707_100053022 3300005468 Bacteria 3888
24 Ga0070698_100001196 3300005471 Bacteria 28804
25 Ga0070679_100000004 3300005530 Bacteria 263662
26 Ga0070684_100042744 3300005535 Bacteria 3914
27 Ga0070686_100011927 3300005544 Bacteria 4941
28 Ga0070704_100160819 3300005549 Bacteria 1776
29 Ga0068852_100109516 3300005616 Bacteria 2508
30 Ga0068859_100199643 3300005617 Bacteria 2084
31 Ga0068866_10007138 3300005718 Bacteria 4671
32 Ga0068861_100039875 3300005719 Bacteria 3508
33 Ga0068860_100013545 3300005843 Bacteria 7995
34 Ga0068862_100209084 3300005844 Bacteria 1763
35 Ga0070717_10075791 3300006028 Bacteria 2814
36 Ga0075365_10046711 3300006038 Bacteria 2844
37 Ga0075363_100003886 3300006048 Bacteria 6447
38 Ga0075367_10011772 3300006178 Bacteria 4642
39 Ga0075367_10061135 3300006178 Bacteria 2247
40 Ga0097621_100019556 3300006237 Bacteria 5200
41 Ga0075370_10036379 3300006353 Bacteria 2765
42 Ga0068871_100131538 3300006358 Bacteria 2122
43 Ga0075428_100015558 3300006844 Bacteria 8434
44 Ga0075433_10211350 3300006852 Bacteria 1724
45 Ga0075436_100131421 3300006914 Bacteria 1756
46 Ga0097620_100199650 3300006931 Bacteria 2084
47 Ga0075435_100001169 3300007076 Bacteria 16768
48 Ga0111539_10006278 3300009094 Bacteria 15343
49 Ga0105247_10202719 3300009101 Bacteria 1334
50 Ga0105243_10000320 3300009148 Bacteria 52858
51 Ga0105243_10041324 3300009148 Bacteria 3606
52 Ga0105242_10012056 3300009176 Bacteria 6653
53 Ga0105248_10074958 3300009177 Bacteria 3803
54 Ga0105238_10182784 3300009551 Bacteria 2073
55 Ga0105249_10187932 3300009553 Bacteria 2014
56 Ga0157369_10027826 3300013105 Bacteria 6263
57 Ga0157378_10002258 3300013297 Bacteria 17116
58 Ga0157372_10223882 3300013307 Bacteria 2181
59 Ga0157379_10030697 3300014968 Bacteria 4786
60 Ga0163161_10024379 3300017792 Bacteria 4273
61 Ga0206353_11915512 3300020082 Bacteria 9529
62 Ga0213876_10000806 3300021384 Bacteria 21220
63 Ga0207697_10031282 3300025315 Bacteria 2177
64 Ga0207692_10002796 3300025898 Bacteria 6738
65 Ga0207642_10021472 3300025899 Bacteria 2542
66 Ga0207685_10006498 3300025905 Bacteria 3188
67 Ga0207705_10007375 3300025909 Bacteria 8085
68 Ga0207707_10000029 3300025912 Bacteria 162223
69 Ga0207660_10000549 3300025917 Bacteria 25169
70 Ga0207660_10174250 3300025917 Bacteria 1667
71 Ga0207662_10040240 3300025918 Bacteria 2747
72 Ga0207657_10028487 3300025919 Bacteria 5094
73 Ga0207652_10000049 3300025921 Bacteria 123521
74 Ga0207681_10117238 3300025923 Bacteria 1947
75 Ga0207700_10014802 3300025928 Bacteria 5122
76 Ga0207700_10020104 3300025928 Bacteria 4526
77 Ga0207700_10056666 3300025928 Bacteria 2951
78 Ga0207700_10219867 3300025928 Bacteria 1610
79 Ga0207664_10001991 3300025929 Bacteria 13449
80 Ga0207664_10092676 3300025929 Bacteria 2480
81 Ga0207664_10195829 3300025929 Bacteria 1742
82 Ga0207664_10251278 3300025929 Bacteria 1543
83 Ga0207686_10015548 3300025934 Bacteria 4256
84 Ga0207709_10004363 3300025935 Bacteria 8186
85 Ga0207709_10027510 3300025935 Bacteria 3278
86 Ga0207669_10025336 3300025937 Bacteria 3204
87 Ga0207711_10071940 3300025941 Bacteria 3003
88 Ga0207712_10124616 3300025961 Bacteria 1954
89 Ga0207678_10000441 3300026067 Bacteria 37760
90 Ga0207648_10238401 3300026089 Bacteria 1619
91 Ga0207675_100010284 3300026118 Bacteria 8766
92 Ga0207698_10225876 3300026142 Bacteria 1696
93 Ga0209813_10020763 3300027866 Bacteria 1841
94 Ga0268264_10057463 3300028381 Bacteria 3254
95 Ga0265338_10008676 3300028800 Bacteria 12297
96 Ga0307511_10000191 3300030521 Bacteria 60992
97 Ga0265330_10027370 3300031235 Bacteria 2576
98 Ga0265320_10020319 3300031240 Bacteria 3603
99 Ga0265340_10000548 3300031247 Bacteria 20803
100 Ga0265339_10004612 3300031249 Bacteria 9372
101 Ga0307513_10105394 3300031456 Bacteria 2829
102 Ga0307513_10154936 3300031456 Bacteria 2193
103 Ga0265313_10021478 3300031595 Bacteria 3530
104 Ga0265313_10028028 3300031595 Bacteria 2936
105 Ga0316576_10004104 3300031727 Bacteria 8682
106 Ga0316576_10005896 3300031727 Bacteria 7563
107 Ga0316578_10025145 3300031728 Bacteria 3345
108 Ga0316578_10029931 3300031728 Bacteria 3092
109 Ga0316577_10022989 3300031733 Bacteria 3462
110 Ga0307518_10000825 3300031838 Bacteria 23259
111 Ga0307407_10110967 3300031903 Bacteria 1721
112 Ga0307412_10026193 3300031911 Bacteria 3622
113 Ga0316580_10001392 3300032139 Bacteria 6309
114 Ga0307510_10081252 3300033180 Bacteria 3144
115 Ga0373948_0004772 3300034817 Bacteria 2164
116 Ga0373950_0003039 3300034818 Bacteria 2369
117 Ga0373928_0002385 3300035084 Bacteria 3651
118 Ga0373934_0008367 3300035086 Bacteria 3855
119 Ga0373934_0021746 3300035086 Bacteria 2472
120 Ga0373940_0024652 3300035088 Bacteria 1561
121 Ga0373949_0005642 3300035090 Bacteria 2785
122 Ga0373956_0010267 3300035119 Bacteria 3833
123 Ga0373956_0029781 3300035119 Bacteria 2382
124 Ga0373956_0036459 3300035119 Bacteria 2170
125 Ga0373960_0038513 3300035121 Bacteria 1371
126 Ga0373955_0027191 3300035172 Bacteria 2954
127 Ga0373942_0029477 3300035207 Bacteria 1440
128 Ga0373961_0010997 3300035241 Bacteria 2239
129 Ga0373962_0008004 3300035242 Bacteria 2596
130 Ga0316574_0005176 3300035398 Bacteria 6938
131 Ga0316574_0011253 3300035398 Bacteria 5081
132 Ga0316574_0128955 3300035398 Bacteria 1627
133 Ga0316574_0168485 3300035398 Bacteria 1410
134 Ga0373924_0018500 3300035410 Bacteria 2685
135 Ga0373935_0037937 3300035692 Bacteria 3016
136 Ga0373935_0125303 3300035692 Bacteria 1720
137 Ga0373927_0045826 3300035695 Bacteria 2829
138 Ga0373933_0004630 3300035724 Bacteria 7535
139 Ga0373933_0049555 3300035724 Bacteria 2504
140 Ga0373933_0062920 3300035724 Bacteria 2242
141 Ga0373947_0065561 3300035725 Bacteria 2215
142 Ga0373937_0033412 3300036401 Bacteria 4671
143 Ga0373937_0098651 3300036401 Bacteria 2709
144 Ga0316582_0012686 3300036647 Bacteria 4714
145 Ga0316582_0013632 3300036647 Bacteria 4582
146 Ga0316584_0024065 3300036712 Bacteria 4453
147 Ga0316584_0062508 3300036712 Bacteria 2788
148 Ga0373925_0046922 3300037068 Bacteria 3213
149 Ga0436365_0193830 3300039437 Bacteria 10257
150 Ga0436365_1681937 3300039437 Bacteria 28049
151 Ga0451793_0274679 3300041452 Bacteria 2723
152 Ga0451837_0881682 3300041494 Bacteria 1883
153 Ga0451839_0142832 3300041496 Bacteria 3074
154 Ga0439445_0014591 3300042004 Bacteria 1915
155 Ga0439432_026202 3300042006 Bacteria 1909
156 Ga0439446_0034199 3300042156 Bacteria 1478
157 Ga0451577_0007501 3300042876 Bacteria 10712
158 Ga0466969_0060884 3300044656 Bacteria 1835
159 Ga0466969_0078341 3300044656 Bacteria 1580
160 Ga0466969_0079032 3300044656 Bacteria 1572
161 Ga0466972_0009678 3300044658 Bacteria 4836
162 Ga0466972_0021874 3300044658 Bacteria 3186
163 Ga0466965_0005745 3300044683 Bacteria 5600
164 Ga0466966_0020025 3300044684 Bacteria 4402
165 Ga0466961_0015176 3300044693 Bacteria 4947
166 Ga0466961_0021662 3300044693 Bacteria 4135
167 Ga0466961_0024797 3300044693 Bacteria 3858
168 Ga0466963_0006456 3300044694 Bacteria 6938
169 Ga0466964_0043817 3300044706 Bacteria 1816
170 Ga0453684_0128084 3300044712 Bacteria 3051
171 Ga0466971_0034041 3300044719 Bacteria 2283
172 Ga0466968_0053624 3300044735 Bacteria 1728
173 Ga0466970_0001885 3300044765 Bacteria 10139
174 Ga0466970_0026981 3300044765 Bacteria 3011
175 Ga0466957_0134810 3300044842 Bacteria 1586
176 Ga0466960_0049088 3300044901 Bacteria 2030
177 Ga0466959_0032775 3300045049 Bacteria 3845
178 Ga0466958_0001453 3300045836 Bacteria 11254
179 Ga0466967_0009262 3300045976 Bacteria 7295
180 Ga0466967_0016927 3300045976 Bacteria 5766
181 Ga0466967_0204441 3300045976 Bacteria 1871
182 Ga0495603_0003925 3300046455 Bacteria 8862
183 Ga0495629_0006177 3300046459 Bacteria 8895
184 Ga0495629_0114067 3300046459 Bacteria 1883
185 Ga0495651_0030999 3300046462 Bacteria 4170
186 Ga0495651_0031298 3300046462 Bacteria 4149
187 Ga0495651_0198856 3300046462 Bacteria 1404
188 Ga0495582_0025342 3300046473 Bacteria 3248
189 Ga0495664_0075603 3300046477 Bacteria 2015
190 Ga0495585_0022604 3300046492 Bacteria 3610
191 Ga0495628_0112728 3300046516 Bacteria 2090
192 Ga0495631_0031788 3300046518 Bacteria 2383
193 Ga0495652_0050254 3300046529 Bacteria 3565
194 Ga0495609_0020727 3300046538 Bacteria 3035
195 Ga0495645_0121843 3300046543 Bacteria 1835
196 Ga0495634_0071086 3300046642 Bacteria 2292
197 Ga0495646_0012365 3300046680 Bacteria 5428
198 Ga0495658_0026750 3300046683 Bacteria 3095
199 Ga0495613_0012371 3300046689 Bacteria 6341
200 Ga0495589_0031325 3300046794 Bacteria 2677
201 Ga0495604_0017847 3300047317 Bacteria 5676
202 Ga0495680_0012963 3300047322 Bacteria 7299
203 Ga0495680_0104230 3300047322 Bacteria 2110
204 Ga0495683_0011700 3300047323 Bacteria 4616
205 Ga0495684_0021297 3300047471 Bacteria 4993
206 Ga0495602_0015453 3300048088 Bacteria 7702
207 Ga0495602_0066625 3300048088 Bacteria 3101
208 Ga0495602_0069063 3300048088 Bacteria 3031
209 Ga0495614_0007816 3300048089 Bacteria 4754
210 Ga0496102_0004188 3300048905 Bacteria 12201
211 Ga0496102_0086680 3300048905 Bacteria 2892
212 Ga0496105_0011016 3300048908 Bacteria 7126
213 Ga0496105_0018034 3300048908 Bacteria 5665
214 Ga0496106_0110092 3300048909 Bacteria 2144
215 Ga0496108_0110043 3300048911 Bacteria 2355
216 Ga0496110_0109289 3300048913 Bacteria 2483
217 Ga0496110_0282211 3300048913 Bacteria 1512
218 Ga0496111_0005719 3300048914 Bacteria 8017
219 Ga0496111_0012225 3300048914 Bacteria 5807
220 Ga0496112_0084338 3300048915 Bacteria 3142
221 Ga0496113_0155143 3300048916 Bacteria 1808
222 Ga0496113_0241110 3300048916 Bacteria 1442
223 Ga0496114_0016106 3300048917 Bacteria 6016
224 Ga0496114_0017914 3300048917 Bacteria 5724
225 Ga0496114_0259319 3300048917 Bacteria 1530
226 Ga0496115_0017984 3300048918 Bacteria 5415
227 Ga0496122_0001611 3300048925 Bacteria 35279
228 Ga0496123_0000757 3300048926 Bacteria 52251
229 Ga0501031_0054608 3300049568 Bacteria 2603
230 Ga0501032_0007672 3300049569 Bacteria 7866
231 Ga0501032_0010952 3300049569 Bacteria 6521
232 Ga0501034_0000497 3300049571 Bacteria 63778
233 Ga0501034_0001863 3300049571 Bacteria 26757
234 Ga0501034_0006559 3300049571 Bacteria 12500
235 Ga0501034_0014882 3300049571 Bacteria 8003
236 Ga0501034_0063167 3300049571 Bacteria 3717
237 Ga0501034_0144997 3300049571 Bacteria 2352
238 Ga0501036_0016157 3300049572 Bacteria 6237
239 Ga0501036_0274119 3300049572 Bacteria 1412
240 Ga0501037_0000545 3300049573 Bacteria 30042
241 Ga0501038_0005943 3300049574 Bacteria 11289
242 Ga0501038_0025338 3300049574 Bacteria 5288
243 Ga0501038_0112775 3300049574 Bacteria 2251
244 Ga0501039_0058072 3300049575 Bacteria 2996
245 Ga0501039_0207784 3300049575 Bacteria 1539
246 Ga0501040_0072893 3300049576 Bacteria 2372
247 Ga0501040_0092138 3300049576 Bacteria 2107
248 Ga0501046_0002488 3300049580 Bacteria 17265
249 Ga0501047_0038446 3300049581 Bacteria 4630
250 Ga0501048_0062758 3300049582 Bacteria 2629
251 Ga0501070_0002598 3300049586 Bacteria 15780
252 Ga0501070_0077098 3300049586 Bacteria 2759
253 Ga0501071_0092897 3300049587 Bacteria 2218
254 Ga0501072_0065996 3300049588 Bacteria 2854
255 Ga0501072_0101624 3300049588 Bacteria 2285
256 Ga0501075_0026312 3300049591 Bacteria 4282
257 Ga0501076_0093098 3300049592 Bacteria 2425
258 Ga0501079_0058054 3300049741 Bacteria 2986
259 Ga0501044_0010907 3300049823 Bacteria 9862
260 Ga0501044_0062720 3300049823 Bacteria 3798
261 Ga0501045_0022416 3300049824 Bacteria 4522
262 Ga0501045_0027903 3300049824 Bacteria 4071
263 nmdc:mga03n38_3881_c1 3300050490 Bacteria 4867
264 nmdc:mga03n38_40099_c1 3300050490 Bacteria 2034
265 nmdc:mga00v17_184932_c1 3300050491 Bacteria 1345
266 nmdc:mga0yw44_2303_c1 3300050492 Bacteria 8075
267 nmdc:mga0yw44_30317_c1 3300050492 Bacteria 3132
268 nmdc:mga0yw44_9335_c1 3300050492 Bacteria 4952
269 nmdc:mga07m45_7627_c1 3300050496 Bacteria 5535
270 nmdc:mga08y16_24225_c1 3300050511 Bacteria 6407
271 nmdc:mga08y16_85243_c1 3300050511 Bacteria 3292
272 Ga0495619_0120799 3300053085 Bacteria 1796
273 Ga0500644_0000067 3300053088 Bacteria 61703
274 Ga0500573_0002076 3300053140 Bacteria 9854
275 Ga0500579_065553 3300053143 Bacteria 2129
276 Ga0500600_0064865 3300053149 Bacteria 2022
277 Ga0500604_0019415 3300053151 Bacteria 1903
278 Ga0501084_0177293 3300054114 Bacteria 1799
279 Ga0501082_0036915 3300060353 Bacteria 4210
280 Ga0466962_0023252 3300061719 Bacteria 2979
281 Ga0466962_0027965 3300061719 Bacteria 2703
282 8055177834 8055172936 Bacteria 9305943
283 2559432794 2558860280 Bacteria 11429938
284 2583151759 2582580736 Bacteria 5325865
285 2586062574 2585427649 Bacteria 9053857
286 2689957334 2687453737 Bacteria 11203906
287 2739240472 2738543011 Bacteria 5731169
288 2809588247 2808606522 Bacteria 9488490
289 2842889798 2842888712 Bacteria 4279094
290 2855387035 2855386786 Bacteria 4752232
291 2862294021 2862290372 Bacteria 7471434
292 2862583054 2862574272 Bacteria 10567477
293 2866557237 2866552031 Bacteria 5824618
294 2889303762 2889300758 Bacteria 5690814
295 2891398311 2891395885 Bacteria 9251614
296 2899367079 2899359706 Bacteria 10940472
297 2899371223 2899370129 Bacteria 6781179
298 2915771306 2915768154 Bacteria 8424322
299 2918501324 2918501144 Bacteria 8668083
300 2932401675 2932398195 Bacteria 3847976
301 2939747547 2939743619 Bacteria 5762299
302 3003008818 3002998708 Bacteria 11715108
303 8003317518 8003314358 Bacteria 10575343
304 8054165377 8054160619 Bacteria 7783213
305 rootH1_10066911
306 Ga0070658_10011726
307 Ga0070690_100045430
308 Ga0070680_100000222
309 Ga0070687_100030727
310 Ga0070668_100002118
311 Ga0070668_100061913
312 Ga0070674_100133846
313 Ga0070659_100114408
314 Ga0070667_100007962
315 Ga0070667_100045613
316 Ga0070667_100261767
317 Ga0070709_10000483
318 Ga0070714_100016427
319 Ga0070713_100055034
320 Ga0070710_10042190
321 Ga0070711_100229926
322 Ga0070705_100102300
323 Ga0070708_100149704
324 Ga0070663_100002510
325 Ga0070681_10000023
326 Ga0070707_100052912
327 Ga0070707_100053022
328 Ga0070698_100001196
329 Ga0070679_100000004
330 Ga0070684_100042744
331 Ga0070686_100011927
332 Ga0070704_100160819
333 Ga0068852_100109516
334 Ga0068859_100199643
335 Ga0068866_10007138
336 Ga0068861_100039875
337 Ga0068860_100013545
338 Ga0068862_100209084
339 Ga0070717_10075791
340 Ga0075365_10046711
341 Ga0075363_100003886
342 Ga0075367_10011772
343 Ga0075367_10061135
344 Ga0097621_100019556
345 Ga0075370_10036379
346 Ga0068871_100131538
347 Ga0075428_100015558
348 Ga0075433_10211350
349 Ga0075436_100131421
350 Ga0097620_100199650
351 Ga0075435_100001169
352 Ga0111539_10006278
353 Ga0105247_10202719
354 Ga0105243_10000320
355 Ga0105243_10041324
356 Ga0105242_10012056
357 Ga0105248_10074958
358 Ga0105238_10182784
359 Ga0105249_10187932
360 Ga0157369_10027826
361 Ga0157378_10002258
362 Ga0157372_10223882
363 Ga0157379_10030697
364 Ga0163161_10024379
365 Ga0206353_11915512
366 Ga0213876_10000806
367 Ga0207697_10031282
368 Ga0207692_10002796
369 Ga0207642_10021472
370 Ga0207685_10006498
371 Ga0207705_10007375
372 Ga0207707_10000029
373 Ga0207660_10000549
374 Ga0207660_10174250
375 Ga0207662_10040240
376 Ga0207657_10028487
377 Ga0207652_10000049
378 Ga0207681_10117238
379 Ga0207700_10014802
380 Ga0207700_10020104
381 Ga0207700_10056666
382 Ga0207700_10219867
383 Ga0207664_10001991
384 Ga0207664_10092676
385 Ga0207664_10195829
386 Ga0207664_10251278
387 Ga0207686_10015548
388 Ga0207709_10004363
389 Ga0207709_10027510
390 Ga0207669_10025336
391 Ga0207711_10071940
392 Ga0207712_10124616
393 Ga0207678_10000441
394 Ga0207648_10238401
395 Ga0207675_100010284
396 Ga0207698_10225876
397 Ga0209813_10020763
398 Ga0268264_10057463
399 Ga0265338_10008676
400 Ga0307511_10000191
401 Ga0265330_10027370
402 Ga0265320_10020319
403 Ga0265340_10000548
404 Ga0265339_10004612
405 Ga0307513_10105394
406 Ga0307513_10154936
407 Ga0265313_10021478
408 Ga0265313_10028028
409 Ga0316576_10004104
410 Ga0316576_10005896
411 Ga0316578_10025145
412 Ga0316578_10029931
413 Ga0316577_10022989
414 Ga0307518_10000825
415 Ga0307407_10110967
416 Ga0307412_10026193
417 Ga0316580_10001392
418 Ga0307510_10081252
419 Ga0373948_0004772
420 Ga0373950_0003039
421 Ga0373928_0002385
422 Ga0373934_0008367
423 Ga0373934_0021746
424 Ga0373940_0024652
425 Ga0373949_0005642
426 Ga0373956_0010267
427 Ga0373956_0029781
428 Ga0373956_0036459
429 Ga0373960_0038513
430 Ga0373955_0027191
431 Ga0373942_0029477
432 Ga0373961_0010997
433 Ga0373962_0008004
434 Ga0316574_0005176
435 Ga0316574_0011253
436 Ga0316574_0128955
437 Ga0316574_0168485
438 Ga0373924_0018500
439 Ga0373935_0037937
440 Ga0373935_0125303
441 Ga0373927_0045826
442 Ga0373933_0004630
443 Ga0373933_0049555
444 Ga0373933_0062920
445 Ga0373947_0065561
446 Ga0373937_0033412
447 Ga0373937_0098651
448 Ga0316582_0012686
449 Ga0316582_0013632
450 Ga0316584_0024065
451 Ga0316584_0062508
452 Ga0373925_0046922
453 Ga0436365_0193830
454 Ga0436365_1681937
455 Ga0451793_0274679
456 Ga0451837_0881682
457 Ga0451839_0142832
458 Ga0439445_0014591
459 Ga0439432_026202
460 Ga0439446_0034199
461 Ga0451577_0007501
462 Ga0466969_0060884
463 Ga0466969_0078341
464 Ga0466969_0079032
465 Ga0466972_0009678
466 Ga0466972_0021874
467 Ga0466965_0005745
468 Ga0466966_0020025
469 Ga0466961_0015176
470 Ga0466961_0021662
471 Ga0466961_0024797
472 Ga0466963_0006456
473 Ga0466964_0043817
474 Ga0453684_0128084
475 Ga0466971_0034041
476 Ga0466968_0053624
477 Ga0466970_0001885
478 Ga0466970_0026981
479 Ga0466957_0134810
480 Ga0466960_0049088
481 Ga0466959_0032775
482 Ga0466958_0001453
483 Ga0466967_0009262
484 Ga0466967_0016927
485 Ga0466967_0204441
486 Ga0495603_0003925
487 Ga0495629_0006177
488 Ga0495629_0114067
489 Ga0495651_0030999
490 Ga0495651_0031298
491 Ga0495651_0198856
492 Ga0495582_0025342
493 Ga0495664_0075603
494 Ga0495585_0022604
495 Ga0495628_0112728
496 Ga0495631_0031788
497 Ga0495652_0050254
498 Ga0495609_0020727
499 Ga0495645_0121843
500 Ga0495634_0071086
501 Ga0495646_0012365
502 Ga0495658_0026750
503 Ga0495613_0012371
504 Ga0495589_0031325
505 Ga0495604_0017847
506 Ga0495680_0012963
507 Ga0495680_0104230
508 Ga0495683_0011700
509 Ga0495684_0021297
510 Ga0495602_0015453
511 Ga0495602_0066625
512 Ga0495602_0069063
513 Ga0495614_0007816
514 Ga0496102_0004188
515 Ga0496102_0086680
516 Ga0496105_0011016
517 Ga0496105_0018034
518 Ga0496106_0110092
519 Ga0496108_0110043
520 Ga0496110_0109289
521 Ga0496110_0282211
522 Ga0496111_0005719
523 Ga0496111_0012225
524 Ga0496112_0084338
525 Ga0496113_0155143
526 Ga0496113_0241110
527 Ga0496114_0016106
528 Ga0496114_0017914
529 Ga0496114_0259319
530 Ga0496115_0017984
531 Ga0496122_0001611
532 Ga0496123_0000757
533 Ga0501031_0054608
534 Ga0501032_0007672
535 Ga0501032_0010952
536 Ga0501034_0000497
537 Ga0501034_0001863
538 Ga0501034_0006559
539 Ga0501034_0014882
540 Ga0501034_0063167
541 Ga0501034_0144997
542 Ga0501036_0016157
543 Ga0501036_0274119
544 Ga0501037_0000545
545 Ga0501038_0005943
546 Ga0501038_0025338
547 Ga0501038_0112775
548 Ga0501039_0058072
549 Ga0501039_0207784
550 Ga0501040_0072893
551 Ga0501040_0092138
552 Ga0501046_0002488
553 Ga0501047_0038446
554 Ga0501048_0062758
555 Ga0501070_0002598
556 Ga0501070_0077098
557 Ga0501071_0092897
558 Ga0501072_0065996
559 Ga0501072_0101624
560 Ga0501075_0026312
561 Ga0501076_0093098
562 Ga0501079_0058054
563 Ga0501044_0010907
564 Ga0501044_0062720
565 Ga0501045_0022416
566 Ga0501045_0027903
567 nmdc:mga03n38_3881_c1
568 nmdc:mga03n38_40099_c1
569 nmdc:mga00v17_184932_c1
570 nmdc:mga0yw44_2303_c1
571 nmdc:mga0yw44_30317_c1
572 nmdc:mga0yw44_9335_c1
573 nmdc:mga07m45_7627_c1
574 nmdc:mga08y16_24225_c1
575 nmdc:mga08y16_85243_c1
576 Ga0495619_0120799
577 Ga0500644_0000067
578 Ga0500573_0002076
579 Ga0500579_065553
580 Ga0500600_0064865
581 Ga0500604_0019415
582 Ga0501084_0177293
583 Ga0501082_0036915
584 Ga0466962_0023252
585 Ga0466962_0027965
586 8055177834
587 2559432794
588 2583151759
589 2586062574
590 2689957334
591 2739240472
592 2809588247
593 2842889798
594 2855387035
595 2862294021
596 2862583054
597 2866557237
598 2889303762
599 2891398311
600 2899367079
601 2899371223
602 2915771306
603 2918501324
604 2932401675
605 2939747547
606 3003008818
607 8003317518
608 8054165377

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

271

420

0.97

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

181

259

0.88

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

1

117

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.8481 2 373
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.8439 2 373
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.8376 2 373
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.8337 2 373
4x28-assembly1.cif.gz_A crystal structure of the chse4-chse5 complex from mycobacterium tuberculosis 0.8195 2 372
ID Description Score Start End Superfamily
af_I6Y3V5_2_119_1.10.540.10 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9783 1 113 1.10.540.10
af_I6Y3V5_2_119_1.10.540.10 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9298 1 113 1.10.540.10
af_I6Y3V5_236_384_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9277 230 375 1.20.140.10
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9208 120 228 2.40.110.10
af_I6Y3V5_236_384_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9041 230 375 1.20.140.10
ID Description Score Start End GO Terms
AF-E2Q105-F1-model_v4 Putative acyl-CoA dehydrogenase 0.9426 2 373 GO:0005886
GO:0016627
GO:0050660
AF-A0A524NJL8-F1-model_v4 Acyl-CoA dehydrogenase 0.9398 139 376 GO:0005886
GO:0016627
AF-A0A7K2EPP8-F1-model_v4 deleted 0.9397 28 373
AF-A0A2I2KMY5-F1-model_v4 Putative acyl-CoA dehydrogenase FadE17 (EC 1.3.99.-) 0.9314 2 372 GO:0005886
GO:0016627
GO:0050660
AF-E2Q105-F1-model_v4 Putative acyl-CoA dehydrogenase 0.9304 2 373 GO:0005886
GO:0016627
GO:0050660

Map