F397787

General Info

Members Datasets Scaffolds Average Seq Length
304 140 304 293

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0031376|Ga0501033_0031376_871_1851
Length 326
Sequence LRRLHRRNYCQAQNGASVVFARGSRKIMNALTAKLLAFFVALLLALPAAAGAQPSLWHVKGSQGQAWLFGSIHVLPPDIAWRTPKIEAALAGADVFVFEVPQDAATTAHVQALVAKHGYLPQGVLLRDLLHPAVQAKFDAAVAAAGLPAGQINHERPWLAGLQILFAQMGQRQFGTADGVDAVVMDMARKTGKPMRYLETIDEQFALLAPDDPTLELDEFESGLSDRDSTEAMVQPMVDAWKSGDQAGLAKIVNADMEDFPAVKKALFDDRNARWVAKIAAMLKQKHRFFITVGAGHLAGPQGVPALLRKAGYTVEGPGAPAPPAP

Samples

Sample ID Description Type Environment
1 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
90 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
91 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
92 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
93 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
94 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
95 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
96 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
97 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
100 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
101 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
106 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
107 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
108 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
134 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
135 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
136 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
137 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
138 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
139 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
140 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.95
Nodule 0
Rhizoplane 0
Rhizosphere 94.41
Stem 0
Stem Tuber 0
Unclassified 1.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000013 3300003214 Bacteria 402100
2 JGI25153J46596_10000468 3300003215 Bacteria 25868
3 rootH2_10007393 3300003320 Bacteria 3788
4 rootH2_10123536 3300003320 Bacteria 1846
5 rootH1_10000220 3300003323 Bacteria 2379
6 Ga0070658_10267684 3300005327 Bacteria 1452
7 Ga0068869_100114740 3300005334 Unclassified 2054
8 Ga0068869_100177024 3300005334 Bacteria 1670
9 Ga0070666_10016053 3300005335 Bacteria 4785
10 Ga0070680_100001264 3300005336 Bacteria 18273
11 Ga0068868_100054422 3300005338 Bacteria 3153
12 Ga0068868_100152937 3300005338 Bacteria 1901
13 Ga0070660_100008888 3300005339 Bacteria 7045
14 Ga0070660_100027017 3300005339 Bacteria 4280
15 Ga0070691_10010013 3300005341 Bacteria 4320
16 Ga0070661_100181229 3300005344 Unclassified 1602
17 Ga0070675_100046672 3300005354 Bacteria 3548
18 Ga0070671_100178965 3300005355 Bacteria 1795
19 Ga0070673_100070924 3300005364 Bacteria 2798
20 Ga0070688_100168100 3300005365 Unclassified 1511
21 Ga0070659_100012056 3300005366 Bacteria 6400
22 Ga0070659_100037571 3300005366 Bacteria 3776
23 Ga0070663_100015524 3300005455 Bacteria 4921
24 Ga0070678_100012351 3300005456 Bacteria 5305
25 Ga0070678_100025909 3300005456 Bacteria 3956
26 Ga0070678_100128837 3300005456 Bacteria 2007
27 Ga0070662_100110492 3300005457 Bacteria 2093
28 Ga0070681_10000001 3300005458 Bacteria 946857
29 Ga0070681_10050051 3300005458 Bacteria 4170
30 Ga0070681_10180408 3300005458 Unclassified 2033
31 Ga0070679_100000248 3300005530 Bacteria 45274
32 Ga0070679_100083560 3300005530 Bacteria 3181
33 Ga0070679_100087060 3300005530 Bacteria 3111
34 Ga0070684_100056709 3300005535 Bacteria 3419
35 Ga0070684_100129097 3300005535 Bacteria 2279
36 Ga0068853_100022629 3300005539 Bacteria 5252
37 Ga0068853_100038116 3300005539 Bacteria 4093
38 Ga0068853_100308765 3300005539 Bacteria 1464
39 Ga0070693_100124538 3300005547 Unclassified 1603
40 Ga0070665_100000549 3300005548 Bacteria 52501
41 Ga0070665_100018996 3300005548 Bacteria 6895
42 Ga0070665_100031563 3300005548 Bacteria 5333
43 Ga0070665_100193485 3300005548 Bacteria 2034
44 Ga0068855_100016516 3300005563 Bacteria 8878
45 Ga0068855_100034670 3300005563 Bacteria 6015
46 Ga0068855_100172372 3300005563 Bacteria 2450
47 Ga0068855_100637047 3300005563 Bacteria 1146
48 Ga0068855_100780923 3300005563 Unclassified 1016
49 Ga0070664_100269400 3300005564 Unclassified 1534
50 Ga0068857_100204419 3300005577 Bacteria 1801
51 Ga0068857_100279381 3300005577 Bacteria 1536
52 Ga0068852_100281811 3300005616 Unclassified 1602
53 Ga0068864_100228528 3300005618 Bacteria 1720
54 Ga0068870_10101108 3300005840 Bacteria 1629
55 Ga0068858_100018143 3300005842 Bacteria 6591
56 Ga0068858_100271792 3300005842 Bacteria 1613
57 Ga0097621_100001143 3300006237 Bacteria 18430
58 Ga0097621_100060082 3300006237 Unclassified 3114
59 Ga0097621_100111792 3300006237 Bacteria 2309
60 Ga0097621_100186662 3300006237 Bacteria 1794
61 Ga0097621_100308795 3300006237 Bacteria 1399
62 Ga0068871_100007297 3300006358 Bacteria 7887
63 Ga0068871_100013912 3300006358 Bacteria 5983
64 Ga0068871_100024575 3300006358 Bacteria 4674
65 Ga0068871_100055859 3300006358 Bacteria 3207
66 Ga0068871_100304511 3300006358 Unclassified 1400
67 Ga0068865_100001892 3300006881 Bacteria 12306
68 Ga0068865_100195288 3300006881 Bacteria 1568
69 Ga0105240_10066945 3300009093 Bacteria 4454
70 Ga0105240_10130266 3300009093 Bacteria 3018
71 Ga0105240_10131219 3300009093 Bacteria 3005
72 Ga0105240_10180715 3300009093 Bacteria 2489
73 Ga0105240_10192745 3300009093 Bacteria 2395
74 Ga0105240_10257259 3300009093 Bacteria 2016
75 Ga0105240_10627787 3300009093 Bacteria 1180
76 Ga0105240_10648225 3300009093 Bacteria 1158
77 Ga0105245_10181135 3300009098 Unclassified 2013
78 Ga0105243_10003153 3300009148 Bacteria 13521
79 Ga0105241_10153461 3300009174 Bacteria 1886
80 Ga0105241_10275271 3300009174 Unclassified 1435
81 Ga0105242_10078496 3300009176 Bacteria 2756
82 Ga0105237_10054758 3300009545 Bacteria 3997
83 Ga0105237_10101084 3300009545 Bacteria 2875
84 Ga0105237_10145307 3300009545 Bacteria 2366
85 Ga0105237_10297572 3300009545 Unclassified 1617
86 Ga0105237_10493054 3300009545 Bacteria 1232
87 Ga0105238_10025419 3300009551 Bacteria 6037
88 Ga0105238_10074891 3300009551 Bacteria 3377
89 Ga0105238_10088383 3300009551 Bacteria 3085
90 Ga0105238_10126006 3300009551 Bacteria 2539
91 Ga0105238_10163824 3300009551 Bacteria 2199
92 Ga0105238_10244619 3300009551 Bacteria 1772
93 Ga0105238_10253189 3300009551 Bacteria 1740
94 Ga0105249_10196270 3300009553 Bacteria 1973
95 Ga0105239_10011124 3300010375 Bacteria 10044
96 Ga0105239_10055862 3300010375 Bacteria 4331
97 Ga0105239_10084933 3300010375 Bacteria 3488
98 Ga0105239_10122553 3300010375 Bacteria 2888
99 Ga0105239_10162067 3300010375 Bacteria 2499
100 Ga0105239_10297136 3300010375 Bacteria 1819
101 Ga0105246_10081895 3300011119 Bacteria 2302
102 Ga0105246_10166284 3300011119 Unclassified 1685
103 Ga0157371_10131539 3300013102 Bacteria 1780
104 Ga0157370_10038954 3300013104 Bacteria 4597
105 Ga0157370_10040875 3300013104 Bacteria 4476
106 Ga0157370_10042936 3300013104 Bacteria 4354
107 Ga0157369_10172492 3300013105 Unclassified 2278
108 Ga0157369_10188137 3300013105 Bacteria 2170
109 Ga0157369_10524380 3300013105 Bacteria 1225
110 Ga0157374_10123015 3300013296 Bacteria 2506
111 Ga0157378_10067274 3300013297 Bacteria 3210
112 Ga0157378_10163762 3300013297 Unclassified 2081
113 Ga0157378_10183091 3300013297 Unclassified 1972
114 Ga0163162_10009139 3300013306 Bacteria 9640
115 Ga0163162_10053064 3300013306 Bacteria 4074
116 Ga0163162_10110941 3300013306 Bacteria 2840
117 Ga0157372_10132157 3300013307 Bacteria 2872
118 Ga0163163_10000180 3300014325 Bacteria 64938
119 Ga0157377_10094891 3300014745 Bacteria 1767
120 Ga0157379_10037798 3300014968 Bacteria 4306
121 Ga0209563_110046 3300025230 Bacteria 1404
122 Ga0209233_1000013 3300025261 Bacteria 1013785
123 Ga0209233_1004908 3300025261 Bacteria 4498
124 Ga0209758_1000185 3300025297 Bacteria 139330
125 Ga0207688_10061861 3300025901 Bacteria 2110
126 Ga0207705_10000418 3300025909 Bacteria 37385
127 Ga0207705_10004612 3300025909 Bacteria 10401
128 Ga0207654_10050792 3300025911 Bacteria 2384
129 Ga0207707_10000001 3300025912 Bacteria 1212482
130 Ga0207707_10016966 3300025912 Bacteria 6344
131 Ga0207695_10024001 3300025913 Bacteria 6875
132 Ga0207695_10067633 3300025913 Bacteria 3664
133 Ga0207695_10080860 3300025913 Bacteria 3290
134 Ga0207695_10162048 3300025913 Bacteria 2167
135 Ga0207695_10163314 3300025913 Bacteria 2157
136 Ga0207695_10210891 3300025913 Bacteria 1853
137 Ga0207695_10260503 3300025913 Bacteria 1632
138 Ga0207695_10343624 3300025913 Bacteria 1380
139 Ga0207671_10031564 3300025914 Bacteria 3947
140 Ga0207660_10005661 3300025917 Bacteria 8106
141 Ga0207660_10005986 3300025917 Bacteria 7897
142 Ga0207660_10009316 3300025917 Bacteria 6356
143 Ga0207657_10001804 3300025919 Bacteria 23094
144 Ga0207657_10017267 3300025919 Bacteria 6927
145 Ga0207657_10032040 3300025919 Bacteria 4754
146 Ga0207652_10000599 3300025921 Bacteria 35992
147 Ga0207652_10003886 3300025921 Bacteria 12224
148 Ga0207652_10019367 3300025921 Bacteria 5597
149 Ga0207652_10123340 3300025921 Bacteria 2307
150 Ga0207694_10085619 3300025924 Bacteria 2481
151 Ga0207694_10236660 3300025924 Bacteria 1492
152 Ga0207650_10367003 3300025925 Unclassified 1187
153 Ga0207659_10032555 3300025926 Bacteria 3580
154 Ga0207644_10080300 3300025931 Bacteria 2409
155 Ga0207690_10010057 3300025932 Bacteria 5620
156 Ga0207706_10099741 3300025933 Bacteria 2555
157 Ga0207686_10030824 3300025934 Bacteria 3180
158 Ga0207709_10395610 3300025935 Bacteria 1055
159 Ga0207704_10040252 3300025938 Bacteria 2729
160 Ga0207704_10319936 3300025938 Unclassified 1196
161 Ga0207689_10021318 3300025942 Bacteria 5448
162 Ga0207689_10268957 3300025942 Bacteria 1411
163 Ga0207667_10045913 3300025949 Bacteria 4625
164 Ga0207667_10069969 3300025949 Bacteria 3653
165 Ga0207667_10298088 3300025949 Bacteria 1647
166 Ga0207677_10078254 3300026023 Bacteria 2361
167 Ga0207677_10119289 3300026023 Bacteria 1981
168 Ga0207639_10002788 3300026041 Bacteria 11729
169 Ga0207639_10080485 3300026041 Bacteria 2577
170 Ga0207678_10103682 3300026067 Bacteria 2428
171 Ga0207648_10007028 3300026089 Bacteria 11130
172 Ga0207648_10107298 3300026089 Bacteria 2451
173 Ga0207676_10239473 3300026095 Bacteria 1627
174 Ga0207674_10053279 3300026116 Bacteria 4124
175 Ga0207674_10213936 3300026116 Bacteria 1876
176 Ga0207683_10002686 3300026121 Bacteria 15540
177 Ga0207683_10031818 3300026121 Bacteria 4581
178 Ga0207683_10136224 3300026121 Bacteria 2210
179 Ga0207698_10416237 3300026142 Unclassified 1288
180 Ga0268266_10015122 3300028379 Bacteria 6626
181 Ga0268266_10043582 3300028379 Bacteria 3835
182 Ga0268266_10094902 3300028379 Bacteria 2619
183 Ga0268266_10370275 3300028379 Unclassified 1349
184 Ga0265334_10032113 3300028573 Bacteria 2095
185 Ga0265338_10000017 3300028800 Bacteria 344481
186 Ga0265338_10030293 3300028800 Bacteria 5335
187 Ga0265338_10084122 3300028800 Bacteria 2658
188 Ga0265332_10003777 3300031238 Bacteria 7242
189 Ga0265325_10000008 3300031241 Bacteria 186174
190 Ga0265325_10003996 3300031241 Bacteria 9432
191 Ga0265329_10089614 3300031242 Unclassified 976
192 Ga0265339_10000353 3300031249 Bacteria 36556
193 Ga0265339_10067672 3300031249 Bacteria 1910
194 Ga0265339_10161657 3300031249 Unclassified 1126
195 Ga0265339_10170692 3300031249 Bacteria 1089
196 Ga0265331_10003754 3300031250 Bacteria 9650
197 Ga0265331_10019318 3300031250 Bacteria 3519
198 Ga0265316_10101474 3300031344 Bacteria 2186
199 Ga0265313_10003027 3300031595 Bacteria 13978
200 Ga0265313_10045155 3300031595 Bacteria 2146
201 Ga0265314_10054914 3300031711 Bacteria 2753
202 Ga0265342_10019349 3300031712 Bacteria 4390
203 Ga0307516_10027708 3300031730 Bacteria 5744
204 Ga0373923_0185216 3300035111 Bacteria 958
205 Ga0395900_0175310 3300037418 Bacteria 2181
206 Ga0395898_0083126 3300037466 Bacteria 3086
207 Ga0395901_0072227 3300038443 Bacteria 3597
208 Ga0436363_0099949 3300039450 Unclassified 1465
209 Ga0466957_0037101 3300044842 Bacteria 2934
210 Ga0495602_0151412 3300048088 Bacteria 1823
211 Ga0501031_0022224 3300049568 Bacteria 4132
212 Ga0501032_0008554 3300049569 Bacteria 7465
213 Ga0501033_0031376 3300049570 Bacteria 3993
214 Ga0501033_0098867 3300049570 Bacteria 2131
215 Ga0501033_0128031 3300049570 Bacteria 1840
216 Ga0501033_0149692 3300049570 Bacteria 1684
217 Ga0501033_0179459 3300049570 Unclassified 1518
218 Ga0501033_0414498 3300049570 Unclassified 938
219 Ga0501034_0005232 3300049571 Bacteria 14237
220 Ga0501034_0016296 3300049571 Bacteria 7629
221 Ga0501034_0049435 3300049571 Bacteria 4243
222 Ga0501034_0586095 3300049571 Unclassified 1022
223 Ga0501036_0021937 3300049572 Bacteria 5369
224 Ga0501036_0131725 3300049572 Bacteria 2111
225 Ga0501036_0304738 3300049572 Bacteria 1332
226 Ga0501037_0049251 3300049573 Bacteria 3086
227 Ga0501037_0049912 3300049573 Bacteria 3064
228 Ga0501037_0051402 3300049573 Bacteria 3014
229 Ga0501037_0126246 3300049573 Bacteria 1837
230 Ga0501038_0008982 3300049574 Bacteria 9171
231 Ga0501038_0044189 3300049574 Bacteria 3872
232 Ga0501038_0123036 3300049574 Bacteria 2137
233 Ga0501039_0003743 3300049575 Bacteria 11433
234 Ga0501039_0122668 3300049575 Bacteria 2037
235 Ga0501040_0044336 3300049576 Bacteria 3032
236 Ga0501042_0008672 3300049578 Bacteria 6738
237 Ga0501043_0055438 3300049579 Bacteria 3114
238 Ga0501043_0067984 3300049579 Bacteria 2797
239 Ga0501043_0075009 3300049579 Bacteria 2657
240 Ga0501043_0160213 3300049579 Bacteria 1758
241 Ga0501046_0002274 3300049580 Bacteria 18108
242 Ga0501047_0002989 3300049581 Bacteria 16039
243 Ga0501047_0021981 3300049581 Bacteria 6126
244 Ga0501047_0022197 3300049581 Bacteria 6098
245 Ga0501047_0028425 3300049581 Bacteria 5391
246 Ga0501047_0065369 3300049581 Bacteria 3506
247 Ga0501047_0111196 3300049581 Bacteria 2622
248 Ga0501047_0124598 3300049581 Bacteria 2457
249 Ga0501047_0193448 3300049581 Bacteria 1897
250 Ga0501047_0256243 3300049581 Bacteria 1598
251 Ga0501047_0372390 3300049581 Bacteria 1263
252 Ga0501047_0424916 3300049581 Unclassified 1160
253 Ga0501047_0475155 3300049581 Unclassified 1078
254 Ga0501048_0002891 3300049582 Bacteria 13111
255 Ga0501067_0000644 3300049583 Bacteria 18750
256 Ga0501067_0007143 3300049583 Bacteria 6203
257 Ga0501067_0041705 3300049583 Bacteria 2548
258 Ga0501069_0033639 3300049585 Bacteria 2824
259 Ga0501070_0000015 3300049586 Bacteria 179449
260 Ga0501070_0004812 3300049586 Bacteria 11540
261 Ga0501070_0005951 3300049586 Bacteria 10395
262 Ga0501072_0274850 3300049588 Bacteria 1340
263 Ga0501073_0008900 3300049589 Bacteria 7420
264 Ga0501073_0012377 3300049589 Bacteria 6225
265 Ga0501073_0139000 3300049589 Bacteria 1683
266 Ga0501074_0000896 3300049590 Bacteria 19028
267 Ga0501074_0006665 3300049590 Bacteria 8344
268 Ga0501079_0019602 3300049741 Bacteria 5165
269 Ga0501079_0036463 3300049741 Bacteria 3788
270 Ga0501079_0171295 3300049741 Bacteria 1693
271 Ga0501080_0005774 3300049742 Bacteria 11068
272 Ga0501080_0023679 3300049742 Bacteria 5689
273 Ga0501080_0098214 3300049742 Bacteria 2718
274 Ga0501080_0110279 3300049742 Bacteria 2550
275 Ga0501080_0204725 3300049742 Bacteria 1810
276 Ga0501080_0266123 3300049742 Bacteria 1561
277 Ga0501083_0008289 3300049744 Bacteria 7350
278 Ga0501083_0045587 3300049744 Bacteria 2966
279 Ga0501083_0055628 3300049744 Bacteria 2652
280 Ga0501035_0004790 3300049822 Bacteria 12835
281 Ga0501035_0009001 3300049822 Bacteria 9285
282 Ga0501035_0033525 3300049822 Bacteria 4670
283 Ga0501035_0057298 3300049822 Bacteria 3474
284 Ga0501035_0093760 3300049822 Bacteria 2641
285 Ga0501044_0001308 3300049823 Bacteria 29339
286 Ga0501044_0006867 3300049823 Bacteria 12540
287 Ga0501044_0008326 3300049823 Bacteria 11365
288 Ga0501044_0009490 3300049823 Bacteria 10594
289 Ga0501044_0035528 3300049823 Bacteria 5218
290 Ga0501044_0066641 3300049823 Bacteria 3670
291 Ga0501044_0075363 3300049823 Bacteria 3425
292 Ga0501044_0251616 3300049823 Bacteria 1707
293 Ga0501044_0306595 3300049823 Bacteria 1515
294 Ga0501044_0339882 3300049823 Bacteria 1422
295 Ga0500635_0082014 3300053080 Bacteria 1161
296 Ga0500643_000021 3300053087 Bacteria 284326
297 Ga0500595_006870 3300053119 Bacteria 4784
298 Ga0500573_0000033 3300053140 Bacteria 117720
299 Ga0500639_035464 3300053163 Bacteria 2634
300 Ga0500645_051108 3300053730 Bacteria 1206
301 Ga0501084_0008910 3300054114 Bacteria 8300
302 Ga0501084_0044291 3300054114 Bacteria 3725
303 Ga0501082_0001485 3300060353 Bacteria 20630
304 Ga0501082_0007396 3300060353 Bacteria 9478

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035111 Ga0373923_0185216 Ga0373923_0185216_43_813 256
2 3300005335 Ga0070666_10016053 Ga0070666_100160533 265
3 3300005338 Ga0068868_100054422 Ga0068868_1000544222 265
4 3300005365 Ga0070688_100168100 Ga0070688_1001681002 265
5 3300005458 Ga0070681_10180408 Ga0070681_101804082 265
6 3300005535 Ga0070684_100129097 Ga0070684_1001290972 265
7 3300005548 Ga0070665_100193485 Ga0070665_1001934853 265
8 3300005842 Ga0068858_100018143 Ga0068858_1000181437 265
9 3300009098 Ga0105245_10181135 Ga0105245_101811352 265
10 3300009545 Ga0105237_10297572 Ga0105237_102975722 265
11 3300013296 Ga0157374_10123015 Ga0157374_101230153 265
12 3300013306 Ga0163162_10009139 Ga0163162_1000913911 265
13 3300025924 Ga0207694_10236660 Ga0207694_102366602 265
14 3300025949 Ga0207667_10069969 Ga0207667_100699695 265
15 3300026142 Ga0207698_10416237 Ga0207698_104162371 265
16 3300053080 Ga0500635_0082014 Ga0500635_0082014_41_862 267
17 3300005564 Ga0070664_100269400 Ga0070664_1002694001 277
18 3300049572 Ga0501036_0131725 Ga0501036_0131725_799_1743 277
19 3300049742 Ga0501080_0098214 Ga0501080_0098214_1725_2669 277
20 3300049823 Ga0501044_0008326 Ga0501044_0008326_5398_6342 277
21 3300005547 Ga0070693_100124538 Ga0070693_1001245382 278
22 3300005616 Ga0068852_100281811 Ga0068852_1002818112 278
23 3300009093 Ga0105240_10257259 Ga0105240_102572592 278
24 3300009174 Ga0105241_10275271 Ga0105241_102752712 278
25 3300009551 Ga0105238_10126006 Ga0105238_101260063 278
26 3300010375 Ga0105239_10162067 Ga0105239_101620672 278
27 3300013307 Ga0157372_10132157 Ga0157372_101321572 278
28 3300025913 Ga0207695_10343624 Ga0207695_103436242 278
29 3300025931 Ga0207644_10080300 Ga0207644_100803002 278
30 3300028800 Ga0265338_10030293 Ga0265338_100302934 278
31 3300031238 Ga0265332_10003777 Ga0265332_100037779 278
32 3300031249 Ga0265339_10067672 Ga0265339_100676722 278
33 3300031250 Ga0265331_10003754 Ga0265331_100037544 278
34 3300049581 Ga0501047_0193448 Ga0501047_0193448_68_961 278
35 3300005456 Ga0070678_100025909 Ga0070678_1000259095 279
36 3300006358 Ga0068871_100024575 Ga0068871_1000245755 279
37 3300006881 Ga0068865_100001892 Ga0068865_1000018929 279
38 3300013306 Ga0163162_10053064 Ga0163162_100530643 279
39 3300025925 Ga0207650_10367003 Ga0207650_103670032 279
40 3300025938 Ga0207704_10319936 Ga0207704_103199361 279
41 3300026089 Ga0207648_10107298 Ga0207648_101072982 279
42 3300026121 Ga0207683_10002686 Ga0207683_1000268611 279
43 3300053087 Ga0500643_000021 Ga0500643_000021_94252_95142 279
44 3300028379 Ga0268266_10094902 Ga0268266_100949021 280
45 3300005339 Ga0070660_100008888 Ga0070660_1000088883 281
46 3300005341 Ga0070691_10010013 Ga0070691_100100135 281
47 3300005366 Ga0070659_100012056 Ga0070659_1000120566 281
48 3300005455 Ga0070663_100015524 Ga0070663_1000155242 281
49 3300005539 Ga0068853_100038116 Ga0068853_1000381166 281
50 3300005563 Ga0068855_100016516 Ga0068855_1000165168 281
51 3300009093 Ga0105240_10130266 Ga0105240_101302663 281
52 3300009551 Ga0105238_10025419 Ga0105238_100254196 281
53 3300013102 Ga0157371_10131539 Ga0157371_101315392 281
54 3300013104 Ga0157370_10038954 Ga0157370_100389544 281
55 3300013104 Ga0157370_10042936 Ga0157370_100429365 281
56 3300013105 Ga0157369_10172492 Ga0157369_101724922 281
57 3300025909 Ga0207705_10000418 Ga0207705_1000041828 281
58 3300025912 Ga0207707_10016966 Ga0207707_100169666 281
59 3300025917 Ga0207660_10005661 Ga0207660_100056613 281
60 3300025919 Ga0207657_10001804 Ga0207657_1000180418 281
61 3300025921 Ga0207652_10003886 Ga0207652_100038863 281
62 3300025932 Ga0207690_10010057 Ga0207690_100100576 281
63 3300025949 Ga0207667_10045913 Ga0207667_100459136 281
64 3300026041 Ga0207639_10080485 Ga0207639_100804854 281
65 3300026067 Ga0207678_10103682 Ga0207678_101036824 281
66 3300037466 Ga0395898_0083126 Ga0395898_0083126_173_1093 281
67 3300038443 Ga0395901_0072227 Ga0395901_0072227_192_1112 281
68 3300005456 Ga0070678_100128837 Ga0070678_1001288372 282
69 3300049571 Ga0501034_0049435 Ga0501034_0049435_2431_3345 283
70 3300049572 Ga0501036_0304738 Ga0501036_0304738_119_1033 283
71 3300049573 Ga0501037_0126246 Ga0501037_0126246_606_1520 283
72 3300049581 Ga0501047_0124598 Ga0501047_0124598_842_1756 283
73 3300049583 Ga0501067_0007143 Ga0501067_0007143_2177_3091 283
74 3300049586 Ga0501070_0004812 Ga0501070_0004812_6490_7404 283
75 3300049590 Ga0501074_0006665 Ga0501074_0006665_2178_3092 283
76 3300049741 Ga0501079_0036463 Ga0501079_0036463_1632_2546 283
77 3300049742 Ga0501080_0204725 Ga0501080_0204725_702_1616 283
78 3300049744 Ga0501083_0045587 Ga0501083_0045587_1551_2531 283
79 3300049822 Ga0501035_0004790 Ga0501035_0004790_1506_2420 283
80 3300049823 Ga0501044_0075363 Ga0501044_0075363_1600_2514 283
81 3300054114 Ga0501084_0044291 Ga0501084_0044291_333_1247 283
82 3300005535 Ga0070684_100056709 Ga0070684_1000567093 284
83 3300005563 Ga0068855_100034670 Ga0068855_1000346708 284
84 3300005577 Ga0068857_100204419 Ga0068857_1002044192 284
85 3300009093 Ga0105240_10648225 Ga0105240_106482252 284
86 3300009551 Ga0105238_10074891 Ga0105238_100748912 284
87 3300013104 Ga0157370_10040875 Ga0157370_100408754 284
88 3300013105 Ga0157369_10188137 Ga0157369_101881372 284
89 3300025913 Ga0207695_10163314 Ga0207695_101633142 284
90 3300025949 Ga0207667_10298088 Ga0207667_102980882 284
91 3300026116 Ga0207674_10213936 Ga0207674_102139362 284
92 3300039450 Ga0436363_0099949 Ga0436363_0099949_348_1208 284
93 3300049575 Ga0501039_0122668 Ga0501039_0122668_544_1518 284
94 3300049579 Ga0501043_0160213 Ga0501043_0160213_275_1249 284
95 3300049581 Ga0501047_0028425 Ga0501047_0028425_1423_2397 284
96 3300049581 Ga0501047_0065369 Ga0501047_0065369_1081_2022 284
97 3300049583 Ga0501067_0041705 Ga0501067_0041705_941_1915 284
98 3300049589 Ga0501073_0012377 Ga0501073_0012377_4672_5646 284
99 3300049741 Ga0501079_0171295 Ga0501079_0171295_164_1138 284
100 3300049742 Ga0501080_0023679 Ga0501080_0023679_4363_5337 284
101 3300049822 Ga0501035_0057298 Ga0501035_0057298_1829_2803 284
102 3300049823 Ga0501044_0006867 Ga0501044_0006867_2226_3200 284
103 3300060353 Ga0501082_0001485 Ga0501082_0001485_13925_14899 284
104 3300003215 JGI25153J46596_10000468 JGI25153J46596_1000046815 285
105 3300009553 Ga0105249_10196270 Ga0105249_101962702 285
106 3300025297 Ga0209758_1000185 Ga0209758_100018535 285
107 3300049571 Ga0501034_0016296 Ga0501034_0016296_345_1325 285
108 3300049574 Ga0501038_0008982 Ga0501038_0008982_6278_7258 285
109 3300053163 Ga0500639_035464 Ga0500639_035464_1551_2408 285
110 3300009545 Ga0105237_10145307 Ga0105237_101453072 286
111 3300025230 Ga0209563_110046 Ga0209563_1100462 286
112 3300049581 Ga0501047_0372390 Ga0501047_0372390_226_1092 286
113 3300031241 Ga0265325_10003996 Ga0265325_100039966 287
114 3300031242 Ga0265329_10089614 Ga0265329_100896141 287
115 3300031249 Ga0265339_10161657 Ga0265339_101616571 287
116 3300031344 Ga0265316_10101474 Ga0265316_101014741 287
117 3300031595 Ga0265313_10045155 Ga0265313_100451552 287
118 3300049568 Ga0501031_0022224 Ga0501031_0022224_934_1803 287
119 3300049569 Ga0501032_0008554 Ga0501032_0008554_721_1590 287
120 3300049570 Ga0501033_0128031 Ga0501033_0128031_674_1543 287
121 3300049571 Ga0501034_0005232 Ga0501034_0005232_2887_3756 287
122 3300049572 Ga0501036_0021937 Ga0501036_0021937_2962_3831 287
123 3300049573 Ga0501037_0051402 Ga0501037_0051402_1472_2341 287
124 3300049574 Ga0501038_0044189 Ga0501038_0044189_674_1543 287
125 3300049575 Ga0501039_0003743 Ga0501039_0003743_8397_9266 287
126 3300049576 Ga0501040_0044336 Ga0501040_0044336_577_1446 287
127 3300049578 Ga0501042_0008672 Ga0501042_0008672_2886_3755 287
128 3300049579 Ga0501043_0067984 Ga0501043_0067984_1532_2401 287
129 3300049580 Ga0501046_0002274 Ga0501046_0002274_6056_6925 287
130 3300049581 Ga0501047_0021981 Ga0501047_0021981_2742_3611 287
131 3300049582 Ga0501048_0002891 Ga0501048_0002891_3298_4167 287
132 3300049583 Ga0501067_0000644 Ga0501067_0000644_5948_6817 287
133 3300049585 Ga0501069_0033639 Ga0501069_0033639_381_1250 287
134 3300049586 Ga0501070_0005951 Ga0501070_0005951_8805_9674 287
135 3300049588 Ga0501072_0274850 Ga0501072_0274850_113_982 287
136 3300049589 Ga0501073_0008900 Ga0501073_0008900_722_1591 287
137 3300049589 Ga0501073_0139000 Ga0501073_0139000_142_1011 287
138 3300049590 Ga0501074_0000896 Ga0501074_0000896_2742_3611 287
139 3300049741 Ga0501079_0019602 Ga0501079_0019602_3576_4445 287
140 3300049742 Ga0501080_0110279 Ga0501080_0110279_143_1012 287
141 3300049744 Ga0501083_0008289 Ga0501083_0008289_5859_6728 287
142 3300049744 Ga0501083_0055628 Ga0501083_0055628_649_1518 287
143 3300049823 Ga0501044_0066641 Ga0501044_0066641_1667_2536 287
144 3300053730 Ga0500645_051108 Ga0500645_051108_144_1025 287
145 3300054114 Ga0501084_0008910 Ga0501084_0008910_1472_2341 287
146 3300060353 Ga0501082_0007396 Ga0501082_0007396_5996_6865 287
147 3300003320 rootH2_10123536 rootH2_101235361 288
148 3300013306 Ga0163162_10110941 Ga0163162_101109412 288
149 3300031730 Ga0307516_10027708 Ga0307516_100277082 288
150 3300049570 Ga0501033_0149692 Ga0501033_0149692_697_1575 289
151 3300049571 Ga0501034_0586095 Ga0501034_0586095_41_919 289
152 3300049573 Ga0501037_0049251 Ga0501037_0049251_1103_1981 289
153 3300049574 Ga0501038_0123036 Ga0501038_0123036_1235_2113 289
154 3300049579 Ga0501043_0055438 Ga0501043_0055438_1928_2806 289
155 3300049822 Ga0501035_0093760 Ga0501035_0093760_335_1213 289
156 3300005327 Ga0070658_10267684 Ga0070658_102676842 290
157 3300005366 Ga0070659_100037571 Ga0070659_1000375715 290
158 3300005539 Ga0068853_100022629 Ga0068853_1000226292 290
159 3300005548 Ga0070665_100031563 Ga0070665_1000315632 290
160 3300005563 Ga0068855_100172372 Ga0068855_1001723722 290
161 3300005563 Ga0068855_100780923 Ga0068855_1007809231 290
162 3300005577 Ga0068857_100279381 Ga0068857_1002793811 290
163 3300009093 Ga0105240_10066945 Ga0105240_100669456 290
164 3300009093 Ga0105240_10192745 Ga0105240_101927454 290
165 3300009174 Ga0105241_10153461 Ga0105241_101534613 290
166 3300009551 Ga0105238_10163824 Ga0105238_101638243 290
167 3300009551 Ga0105238_10244619 Ga0105238_102446192 290
168 3300010375 Ga0105239_10297136 Ga0105239_102971363 290
169 3300013105 Ga0157369_10524380 Ga0157369_105243802 290
170 3300025911 Ga0207654_10050792 Ga0207654_100507923 290
171 3300025913 Ga0207695_10024001 Ga0207695_100240014 290
172 3300025913 Ga0207695_10260503 Ga0207695_102605033 290
173 3300026041 Ga0207639_10002788 Ga0207639_1000278812 290
174 3300026116 Ga0207674_10053279 Ga0207674_100532796 290
175 3300028379 Ga0268266_10043582 Ga0268266_100435825 290
176 3300028800 Ga0265338_10084122 Ga0265338_100841224 290
177 3300031249 Ga0265339_10170692 Ga0265339_101706922 290
178 3300037418 Ga0395900_0175310 Ga0395900_0175310_365_1246 290
179 3300048088 Ga0495602_0151412 Ga0495602_0151412_41_922 290
180 3300049570 Ga0501033_0031376 Ga0501033_0031376_871_1851 290
181 3300049581 Ga0501047_0002989 Ga0501047_0002989_13350_14249 290
182 3300049581 Ga0501047_0475155 Ga0501047_0475155_186_1067 290
183 3300049742 Ga0501080_0005774 Ga0501080_0005774_9142_10023 290
184 3300049822 Ga0501035_0009001 Ga0501035_0009001_403_1302 290
185 3300049823 Ga0501044_0251616 Ga0501044_0251616_547_1446 290
186 3300005458 Ga0070681_10050051 Ga0070681_100500512 291
187 3300005530 Ga0070679_100087060 Ga0070679_1000870604 291
188 3300006237 Ga0097621_100111792 Ga0097621_1001117922 291
189 3300006237 Ga0097621_100308795 Ga0097621_1003087952 291
190 3300006358 Ga0068871_100055859 Ga0068871_1000558594 291
191 3300009093 Ga0105240_10627787 Ga0105240_106277871 291
192 3300009545 Ga0105237_10054758 Ga0105237_100547582 291
193 3300009545 Ga0105237_10493054 Ga0105237_104930541 291
194 3300010375 Ga0105239_10011124 Ga0105239_100111242 291
195 3300010375 Ga0105239_10084933 Ga0105239_100849332 291
196 3300011119 Ga0105246_10081895 Ga0105246_100818952 291
197 3300025913 Ga0207695_10067633 Ga0207695_100676332 291
198 3300025914 Ga0207671_10031564 Ga0207671_100315642 291
199 3300049570 Ga0501033_0098867 Ga0501033_0098867_500_1381 291
200 3300049570 Ga0501033_0414498 Ga0501033_0414498_17_898 291
201 3300049581 Ga0501047_0111196 Ga0501047_0111196_735_1619 291
202 3300049742 Ga0501080_0266123 Ga0501080_0266123_119_1081 291
203 3300005336 Ga0070680_100001264 Ga0070680_10000126411 292
204 3300005344 Ga0070661_100181229 Ga0070661_1001812292 292
205 3300005458 Ga0070681_10000001 Ga0070681_10000001593 292
206 3300005530 Ga0070679_100000248 Ga0070679_1000002484 292
207 3300010375 Ga0105239_10055862 Ga0105239_100558623 292
208 3300025912 Ga0207707_10000001 Ga0207707_10000001277 292
209 3300025917 Ga0207660_10005986 Ga0207660_100059865 292
210 3300025921 Ga0207652_10000599 Ga0207652_100005995 292
211 3300013297 Ga0157378_10163762 Ga0157378_101637622 294
212 3300028573 Ga0265334_10032113 Ga0265334_100321131 294
213 3300028800 Ga0265338_10000017 Ga0265338_1000001777 294
214 3300031241 Ga0265325_10000008 Ga0265325_1000000828 294
215 3300031249 Ga0265339_10000353 Ga0265339_1000035316 294
216 3300031250 Ga0265331_10019318 Ga0265331_100193182 294
217 3300031595 Ga0265313_10003027 Ga0265313_1000302710 294
218 3300031711 Ga0265314_10054914 Ga0265314_100549142 294
219 3300031712 Ga0265342_10019349 Ga0265342_100193491 294
220 3300003323 rootH1_10000220 rootH1_100002203 295
221 3300005355 Ga0070671_100178965 Ga0070671_1001789652 295
222 3300006237 Ga0097621_100186662 Ga0097621_1001866622 295
223 3300006358 Ga0068871_100013912 Ga0068871_1000139126 295
224 3300014325 Ga0163163_10000180 Ga0163163_1000018044 295
225 3300014968 Ga0157379_10037798 Ga0157379_100377984 295
226 3300026023 Ga0207677_10078254 Ga0207677_100782542 295
227 3300053119 Ga0500595_006870 Ga0500595_006870_21_920 295
228 3300005334 Ga0068869_100177024 Ga0068869_1001770242 296
229 3300005338 Ga0068868_100152937 Ga0068868_1001529371 296
230 3300005339 Ga0070660_100027017 Ga0070660_1000270171 296
231 3300005354 Ga0070675_100046672 Ga0070675_1000466724 296
232 3300005364 Ga0070673_100070924 Ga0070673_1000709242 296
233 3300005539 Ga0068853_100308765 Ga0068853_1003087651 296
234 3300005548 Ga0070665_100018996 Ga0070665_1000189962 296
235 3300005840 Ga0068870_10101108 Ga0068870_101011082 296
236 3300005842 Ga0068858_100271792 Ga0068858_1002717922 296
237 3300006237 Ga0097621_100001143 Ga0097621_10000114315 296
238 3300006358 Ga0068871_100007297 Ga0068871_1000072979 296
239 3300009148 Ga0105243_10003153 Ga0105243_100031533 296
240 3300009176 Ga0105242_10078496 Ga0105242_100784965 296
241 3300009551 Ga0105238_10088383 Ga0105238_100883835 296
242 3300010375 Ga0105239_10122553 Ga0105239_101225532 296
243 3300011119 Ga0105246_10166284 Ga0105246_101662843 296
244 3300013297 Ga0157378_10067274 Ga0157378_100672744 296
245 3300014745 Ga0157377_10094891 Ga0157377_100948912 296
246 3300025901 Ga0207688_10061861 Ga0207688_100618613 296
247 3300025919 Ga0207657_10017267 Ga0207657_100172675 296
248 3300025921 Ga0207652_10123340 Ga0207652_101233404 296
249 3300025926 Ga0207659_10032555 Ga0207659_100325554 296
250 3300025934 Ga0207686_10030824 Ga0207686_100308245 296
251 3300025935 Ga0207709_10395610 Ga0207709_103956101 296
252 3300025942 Ga0207689_10021318 Ga0207689_100213184 296
253 3300026023 Ga0207677_10119289 Ga0207677_101192893 296
254 3300026089 Ga0207648_10007028 Ga0207648_100070283 296
255 3300028379 Ga0268266_10370275 Ga0268266_103702752 296
256 3300049823 Ga0501044_0035528 Ga0501044_0035528_1583_2488 296
257 3300049823 Ga0501044_0339882 Ga0501044_0339882_329_1237 296
258 3300005334 Ga0068869_100114740 Ga0068869_1001147403 297
259 3300005618 Ga0068864_100228528 Ga0068864_1002285282 297
260 3300013297 Ga0157378_10183091 Ga0157378_101830912 297
261 3300025261 Ga0209233_1004908 Ga0209233_10049083 297
262 3300025942 Ga0207689_10268957 Ga0207689_102689572 297
263 3300026095 Ga0207676_10239473 Ga0207676_102394732 297
264 3300049570 Ga0501033_0179459 Ga0501033_0179459_523_1437 297
265 3300049573 Ga0501037_0049912 Ga0501037_0049912_742_1647 297
266 3300049581 Ga0501047_0022197 Ga0501047_0022197_4825_5730 297
267 3300049823 Ga0501044_0009490 Ga0501044_0009490_9584_10489 297
268 3300049823 Ga0501044_0306595 Ga0501044_0306595_135_1046 297
269 3300005456 Ga0070678_100012351 Ga0070678_1000123513 298
270 3300005457 Ga0070662_100110492 Ga0070662_1001104922 298
271 3300005530 Ga0070679_100083560 Ga0070679_1000835601 298
272 3300005548 Ga0070665_100000549 Ga0070665_10000054926 298
273 3300005563 Ga0068855_100637047 Ga0068855_1006370471 298
274 3300006237 Ga0097621_100060082 Ga0097621_1000600821 298
275 3300006358 Ga0068871_100304511 Ga0068871_1003045112 298
276 3300006881 Ga0068865_100195288 Ga0068865_1001952883 298
277 3300009093 Ga0105240_10131219 Ga0105240_101312193 298
278 3300009093 Ga0105240_10180715 Ga0105240_101807151 298
279 3300009545 Ga0105237_10101084 Ga0105237_101010842 298
280 3300009551 Ga0105238_10253189 Ga0105238_102531891 298
281 3300025261 Ga0209233_1000013 Ga0209233_1000013604 298
282 3300025909 Ga0207705_10004612 Ga0207705_100046125 298
283 3300025913 Ga0207695_10080860 Ga0207695_100808604 298
284 3300025913 Ga0207695_10162048 Ga0207695_101620482 298
285 3300025913 Ga0207695_10210891 Ga0207695_102108912 298
286 3300025917 Ga0207660_10009316 Ga0207660_100093165 298
287 3300025919 Ga0207657_10032040 Ga0207657_100320404 298
288 3300025921 Ga0207652_10019367 Ga0207652_100193674 298
289 3300025924 Ga0207694_10085619 Ga0207694_100856192 298
290 3300025933 Ga0207706_10099741 Ga0207706_100997412 298
291 3300025938 Ga0207704_10040252 Ga0207704_100402525 298
292 3300026121 Ga0207683_10031818 Ga0207683_100318182 298
293 3300026121 Ga0207683_10136224 Ga0207683_101362242 298
294 3300028379 Ga0268266_10015122 Ga0268266_100151226 298
295 3300044842 Ga0466957_0037101 Ga0466957_0037101_1569_2474 298
296 3300049581 Ga0501047_0424916 Ga0501047_0424916_188_1090 298
297 3300053140 Ga0500573_0000033 Ga0500573_0000033_115754_116671 298
298 3300003320 rootH2_10007393 rootH2_100073935 299
299 3300049579 Ga0501043_0075009 Ga0501043_0075009_906_1826 299
300 3300049581 Ga0501047_0256243 Ga0501047_0256243_587_1507 299
301 3300049586 Ga0501070_0000015 Ga0501070_0000015_118498_119418 299
302 3300049822 Ga0501035_0033525 Ga0501035_0033525_2931_3851 299
303 3300049823 Ga0501044_0001308 Ga0501044_0001308_2925_3845 299
304 3300003214 JGI25165J46597_1000013 JGI25165J46597_1000013358 301

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01963

TraB_PrgY_gumN

TraB/PrgY/gumN family

55

317

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vj2-assembly2.cif.gz_B structure of human respiratory syncytial virus non-structural protein 1 (ns1) 0.6842 36 53
3zoe-assembly1.cif.gz_A crystal structure of fmn-binding protein (yp_005476) from thermus thermophilus with bound p-hydroxybenzaldehyde 0.4262 25 59
8gym-assembly1.cif.gz_e cryo-em structure of tetrahymena thermophila respiratory mega-complex mc iv2+(i+iii2+ii)2 0.4174 28 285
7v3x-assembly4.cif.gz_T crystal structure of cyanobacterial circadian clock protein kaic 0.4165 229 283
3drr-assembly1.cif.gz_A hiv reverse transcriptase y181c mutant in complex with inhibitor r8e 0.4001 256 294
ID Description Score Start End Superfamily
3zoeB00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.4746 26 59 2.30.110.10
af_Q8IKP8_501_625_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.3515 227 294 3.40.50.1820
4tl8F00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.3283 74 291 3.40.50.300
af_A4I2J6_8_258_3.40.1160.10 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.3283 214 279 3.40.1160.10
2olrA03 Alpha Beta;Alpha-Beta Complex;Phosphoenolpyruvate Carboxykinase; domain 3; 0.3206 33 53 3.90.228.20
ID Description Score Start End GO Terms
AF-A0A7V9N050-F1-model_v4 TraB/GumN family protein 0.9564 18 301
AF-A0A848V2Q4-F1-model_v4 TraB/GumN family protein 0.9439 36 300
AF-A0A848V3L7-F1-model_v4 TraB/GumN family protein 0.9431 35 300
AF-A0A7V5NWD5-F1-model_v4 TraB/GumN family protein 0.9313 36 301
AF-A0A848V3R7-F1-model_v4 TraB/GumN family protein 0.9221 36 299

Feature Viewer

pLDDT pTM Quality
86.02 0.85 High
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Predicted Structure (AlphaFold2)

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