F397684

General Info

Members Datasets Scaffolds Average Seq Length
304 226 267 394

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0237316|Ga0395898_0237316_420_1652
Length 410
Sequence MLNLPVYLDYNATTPCDPRVVEAMIPYFTTHFGNAASRSHYYGWQAEEAVDIAREQVAKLIGAEPKEIVFTSGATEADNLAIKGIFELYATKGNHIITTNIEHKAVLDTCKHLEKLGAEVTYLKVKPDGIIDLYELESAIRPDTILISVMYANNETGVIQPVKETSRIARKHGVLFFTDATQATGKIPIDVNDDGIDLLALSAHKLYGPKGVGALYVRRKNPRVKLAAQIDGGGHERGMRSGTLNVPGIVGLGKACELCRLEMQQDAERLRRLRDKLESALLTMEETKVNGSREHRLPHVSNISFRFAESEGLMMGMNKEIAVSSGSACTSASIEPSYVLKAMGLDDELAHSSLRFGLGRFTTEEEIHFAIEKVTKTVTSMRELSPWWNHTKQSGVISQESGIDSKIGKA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
3 2506520008 Serratia plymuthica AS12 Isolate Unclassified
4 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
5 2547132181 Kosakonia sacchari SP1 Isolate Stem
6 2561511199 Enterobacter sp. R4-368 Isolate Nodule
7 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
8 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
9 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
10 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
11 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
12 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
13 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
14 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
15 2711768156 Atlantibacter hermannii DDE1 Isolate Unclassified
16 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
17 2791355010 Kosakonia pseudosacchari NN143 Isolate Unclassified
18 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
19 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
20 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
21 2846540461 Photorhabdus luminescens HIM3 Isolate Rhizosphere
22 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
23 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
24 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
25 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
26 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
27 2904504865 Serratia marcescens 1822 Isolate Unclassified
28 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
29 2932406140 Serratia sp. 2723 Isolate Rhizosphere
30 2935625433 Kosakonia sp. 1610 Isolate Rhizosphere
31 2937967321 Serratia sp. YC16 Isolate Unclassified
32 2939577877 Serratia sp. 509 Isolate Rhizosphere
33 2939617950 Kosakonia cowanii 2056 Isolate Rhizosphere
34 2974435778 Kosakonia cowanii SORGH_AS 304 Isolate Unclassified
35 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
36 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
37 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
38 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
39 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
40 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
41 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
42 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
43 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
44 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
45 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
46 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
47 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
48 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
49 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
50 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
51 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
52 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
53 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
54 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
55 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
56 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
57 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
58 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
59 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
60 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
61 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
62 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
63 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
64 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
65 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
66 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
67 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
68 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
69 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
70 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
71 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
72 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
73 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
74 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
75 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
76 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
77 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
78 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
79 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
80 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
81 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
82 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
83 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
84 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
85 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
86 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
87 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
88 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
89 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
90 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
91 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
92 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
93 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
94 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
95 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
96 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
97 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
98 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
99 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
100 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
101 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
102 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
103 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
106 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
133 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
136 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
137 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
138 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
139 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
140 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
141 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
142 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
143 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
144 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
145 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
146 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
147 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
148 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
149 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
150 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
151 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
152 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
153 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
154 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
155 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
156 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
157 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
158 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
159 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
160 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
161 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
162 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
163 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
164 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
165 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
166 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
167 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
168 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
169 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
170 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
171 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
172 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
173 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
174 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
175 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
176 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
177 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
178 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
179 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
180 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
181 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
182 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
183 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
184 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
185 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
186 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
187 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
193 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
194 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
197 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
198 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
199 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
200 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
201 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
202 3300049666 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A4_B_2_control Metagenome Rhizosphere
203 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
204 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
205 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
206 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
207 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
208 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
209 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
210 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
211 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
212 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
213 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
214 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
215 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
216 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
217 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
218 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
219 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
220 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
221 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
222 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
223 8004592986 Serratia sp. S119 Isolate Unclassified
224 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
225 8019504834 Atlantibacter hermannii 1903 Isolate Rhizosphere
226 8054844752 Dryocola boscaweniae H18W14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.17
Metatranscriptomes 0.33
Isolates 12.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.28
Nodule 1.97
Rhizoplane 2.3
Rhizosphere 79.93
Stem 0.33
Stem Tuber 0
Unclassified 11.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3330649 2162886007 Bacteria 2767
2 JGI25152J39213_1000988 3300002773 Bacteria 13800
3 rootH2_10118263 3300003320 Unclassified 1596
4 rootH1_10113418 3300003316 Bacteria 2315
5 rootH1_10113418 3300003323 Bacteria 10728
6 Ga0006562J51391_1031952 3300003578 Bacteria 2621
7 Ga0055535_1002113 3300003761 Bacteria 7873
8 Ga0055542_1002078 3300003762 Bacteria 7466
9 Ga0065714_10088983 3300005288 Bacteria 1996
10 Ga0065704_10075692 3300005289 Bacteria 5460
11 Ga0065715_10133656 3300005293 Bacteria 1969
12 Ga0070658_10038792 3300005327 Bacteria 3842
13 Ga0070683_100002538 3300005329 Bacteria 14571
14 Ga0070683_100120349 3300005329 Bacteria 2480
15 Ga0070670_100008075 3300005331 Bacteria 8949
16 Ga0070670_100017724 3300005331 Bacteria 6109
17 Ga0070670_100039948 3300005331 Bacteria 4035
18 Ga0070680_100005347 3300005336 Bacteria 9713
19 Ga0070660_100024265 3300005339 Bacteria 4500
20 Ga0070660_100132900 3300005339 Bacteria 1992
21 Ga0070691_10056706 3300005341 Bacteria 1878
22 Ga0070675_100053118 3300005354 Bacteria 3332
23 Ga0070675_100097527 3300005354 Bacteria 2471
24 Ga0070675_100112528 3300005354 Unclassified 2305
25 Ga0070671_100082987 3300005355 Unclassified 2680
26 Ga0070671_100085424 3300005355 Bacteria 2640
27 Ga0070659_100024998 3300005366 Bacteria 4583
28 Ga0070685_10024311 3300005466 Bacteria 3326
29 Ga0070679_100055173 3300005530 Bacteria 3957
30 Ga0070684_100047383 3300005535 Bacteria 3725
31 Ga0068853_100010663 3300005539 Bacteria 7437
32 Ga0068853_100035366 3300005539 Bacteria 4243
33 Ga0068853_100157309 3300005539 Bacteria 2048
34 Ga0070672_100036847 3300005543 Bacteria 3729
35 Ga0070672_100109567 3300005543 Bacteria 2249
36 Ga0070665_100070679 3300005548 Bacteria 3497
37 Ga0068855_100014952 3300005563 Bacteria 9351
38 Ga0068855_100046588 3300005563 Bacteria 5125
39 Ga0070664_100002124 3300005564 Bacteria 15871
40 Ga0068857_100087011 3300005577 Bacteria 2795
41 Ga0068852_100018912 3300005616 Bacteria 5440
42 Ga0068859_100019004 3300005617 Bacteria 6901
43 Ga0068864_100061871 3300005618 Bacteria 3243
44 Ga0068866_10105102 3300005718 Unclassified 1565
45 Ga0068851_10018243 3300005834 Unclassified 3380
46 Ga0068860_100157616 3300005843 Bacteria 2188
47 Ga0075366_10108661 3300006195 Bacteria 1668
48 Ga0097621_100000869 3300006237 Bacteria 21243
49 Ga0097621_100025409 3300006237 Bacteria 4634
50 Ga0097621_100192444 3300006237 Bacteria 1767
51 Ga0068871_100000042 3300006358 Bacteria 67951
52 Ga0068871_100015821 3300006358 Bacteria 5661
53 Ga0075428_100005986 3300006844 Bacteria 13511
54 Ga0075430_100002230 3300006846 Bacteria 16058
55 Ga0075431_100006619 3300006847 Bacteria 11514
56 Ga0075429_100037770 3300006880 Bacteria 4204
57 Ga0097620_100019004 3300006931 Bacteria 6901
58 Ga0079104_1000201 3300006946 Bacteria 83853
59 Ga0079104_1003969 3300006946 Bacteria 6585
60 Ga0105251_10000095 3300009011 Bacteria 85705
61 Ga0105251_10001934 3300009011 Bacteria 16959
62 Ga0105244_10013863 3300009036 Bacteria 4686
63 Ga0105250_10000011 3300009092 Bacteria 276144
64 Ga0105250_10001277 3300009092 Bacteria 13828
65 Ga0105240_10000421 3300009093 Bacteria 78509
66 Ga0105247_10000048 3300009101 Bacteria 150745
67 Ga0114129_10027575 3300009147 Bacteria 8042
68 Ga0114129_10137209 3300009147 Bacteria 3355
69 Ga0105241_10000011 3300009174 Bacteria 243033
70 Ga0105241_10006050 3300009174 Bacteria 8922
71 Ga0105241_10130002 3300009174 Bacteria 2037
72 Ga0105237_10001036 3300009545 Bacteria 37384
73 Ga0105237_10292918 3300009545 Bacteria 1630
74 Ga0105249_10019996 3300009553 Bacteria 5978
75 Ga0105239_10000052 3300010375 Bacteria 164624
76 Ga0157373_10011798 3300013100 Bacteria 6419
77 Ga0157373_10024488 3300013100 Bacteria 4371
78 Ga0157373_10031714 3300013100 Bacteria 3804
79 Ga0157371_10002223 3300013102 Bacteria 18778
80 Ga0157371_10008533 3300013102 Bacteria 8156
81 Ga0157371_10025594 3300013102 Bacteria 4298
82 Ga0157371_10050853 3300013102 Bacteria 2945
83 Ga0157371_10071942 3300013102 Bacteria 2448
84 Ga0157371_10120329 3300013102 Bacteria 1866
85 Ga0157371_10149575 3300013102 Bacteria 1665
86 Ga0157370_10001371 3300013104 Bacteria 30157
87 Ga0157370_10034339 3300013104 Bacteria 4940
88 Ga0157370_10329993 3300013104 Bacteria 1407
89 Ga0157369_10017508 3300013105 Bacteria 8053
90 Ga0157369_10027340 3300013105 Bacteria 6325
91 Ga0157374_10078459 3300013296 Bacteria 3127
92 Ga0157374_10125846 3300013296 Bacteria 2477
93 Ga0157378_10014637 3300013297 Bacteria 6868
94 Ga0163162_10008050 3300013306 Bacteria 10281
95 Ga0163162_10167141 3300013306 Bacteria 2324
96 Ga0157372_10002107 3300013307 Bacteria 21623
97 Ga0157372_10005711 3300013307 Bacteria 13244
98 Ga0157380_10013293 3300014326 Bacteria 5996
99 Ga0182008_10006234 3300014497 Bacteria 6701
100 Ga0157377_10004078 3300014745 Bacteria 6670
101 Ga0157379_10058082 3300014968 Bacteria 3458
102 Ga0157379_10067030 3300014968 Bacteria 3209
103 Ga0157379_10183303 3300014968 Bacteria 1891
104 Ga0157376_10104814 3300014969 Unclassified 2478
105 Ga0163161_10000005 3300017792 Bacteria 327860
106 Ga0163161_10003202 3300017792 Bacteria 11507
107 Ga0163161_10058469 3300017792 Bacteria 2802
108 Ga0213876_10004339 3300021384 Bacteria 7945
109 Ga0209258_100312 3300025242 Bacteria 76080
110 Ga0209148_1000536 3300025254 Bacteria 36946
111 Ga0209129_1000104 3300025258 Bacteria 161264
112 Ga0207656_10010333 3300025321 Unclassified 3495
113 Ga0207696_1000026 3300025711 Bacteria 418166
114 Ga0207696_1000039 3300025711 Bacteria 324954
115 Ga0207696_1001162 3300025711 Bacteria 15076
116 Ga0207655_1003998 3300025728 Bacteria 10658
117 Ga0207713_1000086 3300025735 Bacteria 157106
118 Ga0207713_1000180 3300025735 Bacteria 91168
119 Ga0207710_10000026 3300025900 Bacteria 307644
120 Ga0207680_10051913 3300025903 Bacteria 2454
121 Ga0207654_10000012 3300025911 Bacteria 243044
122 Ga0207695_10000010 3300025913 Bacteria 981919
123 Ga0207695_10000156 3300025913 Bacteria 204576
124 Ga0207657_10015896 3300025919 Bacteria 7270
125 Ga0207657_10057416 3300025919 Bacteria 3354
126 Ga0207652_10035803 3300025921 Bacteria 4193
127 Ga0207694_10026349 3300025924 Bacteria 4422
128 Ga0207650_10002058 3300025925 Bacteria 14067
129 Ga0207650_10012161 3300025925 Bacteria 5933
130 Ga0207650_10135342 3300025925 Unclassified 1932
131 Ga0207650_10191551 3300025925 Bacteria 1634
132 Ga0207659_10078021 3300025926 Unclassified 2440
133 Ga0207644_10010901 3300025931 Bacteria 6004
134 Ga0207644_10077091 3300025931 Unclassified 2454
135 Ga0207690_10077454 3300025932 Bacteria 2311
136 Ga0207670_10047923 3300025936 Bacteria 2848
137 Ga0207691_10111420 3300025940 Unclassified 2433
138 Ga0207711_10084393 3300025941 Bacteria 2780
139 Ga0207661_10003918 3300025944 Bacteria 10392
140 Ga0207661_10295617 3300025944 Bacteria 1451
141 Ga0207661_10369376 3300025944 Bacteria 1297
142 Ga0207679_10040829 3300025945 Bacteria 3324
143 Ga0207679_10059158 3300025945 Unclassified 2842
144 Ga0207667_10008349 3300025949 Bacteria 12309
145 Ga0207667_10417368 3300025949 Bacteria 1365
146 Ga0207640_10161186 3300025981 Bacteria 1660
147 Ga0207658_10008374 3300025986 Bacteria 7040
148 Ga0207658_10033093 3300025986 Bacteria 3685
149 Ga0207639_10013337 3300026041 Bacteria 5751
150 Ga0207639_10089046 3300026041 Bacteria 2465
151 Ga0207648_10076656 3300026089 Bacteria 2914
152 Ga0207674_10171723 3300026116 Bacteria 2121
153 Ga0209281_1000079 3300027111 Bacteria 261444
154 Ga0209281_1000142 3300027111 Bacteria 174280
155 Ga0209281_1000184 3300027111 Bacteria 144981
156 Ga0209371_1000015 3300027312 Bacteria 659640
157 Ga0209371_1000221 3300027312 Bacteria 75566
158 Ga0209371_1000867 3300027312 Bacteria 24388
159 Ga0209371_1001808 3300027312 Bacteria 13349
160 Ga0209371_1004154 3300027312 Bacteria 6477
161 Ga0268266_10161727 3300028379 Bacteria 2026
162 Ga0268256_1000018 3300030500 Bacteria 594572
163 Ga0268256_1000296 3300030500 Bacteria 50031
164 Ga0268256_1000482 3300030500 Bacteria 34168
165 Ga0268256_1002378 3300030500 Bacteria 9680
166 Ga0307511_10040902 3300030521 Bacteria 3926
167 Ga0265327_10067148 3300031251 Unclassified 1807
168 Ga0307508_10003528 3300031616 Bacteria 15762
169 Ga0316579_10045473 3300031691 Bacteria 2047
170 Ga0316576_10003639 3300031727 Bacteria 9084
171 Ga0316578_10004290 3300031728 Bacteria 6700
172 Ga0307412_10062627 3300031911 Bacteria 2506
173 Ga0307510_10001538 3300033180 Bacteria 25465
174 Ga0316574_0014785 3300035398 Bacteria 4518
175 Ga0316574_0113888 3300035398 Bacteria 1734
176 Ga0316584_0046970 3300036712 Bacteria 3225
177 Ga0395898_0237316 3300037466 Bacteria 1739
178 Ga0395905_0151507 3300037471 Bacteria 2182
179 Ga0395905_0309185 3300037471 Bacteria 1469
180 Ga0400483_175292 3300039062 Bacteria 2333
181 Ga0436365_1251897 3300039437 Bacteria 24739
182 Ga0439431_0002660 3300041997 Bacteria 3938
183 Ga0439445_0011945 3300042004 Bacteria 2078
184 Ga0439452_000036 3300042010 Bacteria 158675
185 Ga0466969_0000220 3300044656 Bacteria 31296
186 Ga0466965_0060645 3300044683 Bacteria 1890
187 Ga0466966_0000215 3300044684 Bacteria 38667
188 Ga0453684_0201427 3300044712 Bacteria 2320
189 Ga0466960_0103575 3300044901 Bacteria 1469
190 Ga0466959_0000004 3300045049 Bacteria 216815
191 Ga0495591_002670 3300046458 Bacteria 9708
192 Ga0495650_0000149 3300046471 Bacteria 159524
193 Ga0495606_0000811 3300046507 Bacteria 47506
194 Ga0495606_0002426 3300046507 Bacteria 21733
195 Ga0495616_0016495 3300046513 Bacteria 4087
196 Ga0495643_0095189 3300046522 Bacteria 1532
197 Ga0495648_0014421 3300046524 Bacteria 5787
198 Ga0495654_0000055 3300046530 Bacteria 142121
199 Ga0495597_0000704 3300046542 Bacteria 26756
200 Ga0495668_0001096 3300046616 Bacteria 28039
201 Ga0495670_0100612 3300046691 Bacteria 1488
202 Ga0495671_0003971 3300046692 Bacteria 8947
203 Ga0495649_0061814 3300046694 Bacteria 2014
204 Ga0495660_0000017 3300046810 Bacteria 320655
205 Ga0495672_0000001 3300047320 Bacteria 1458820
206 Ga0495673_0000019 3300047469 Bacteria 554389
207 Ga0495686_0000010 3300047472 Bacteria 573229
208 Ga0495686_0000335 3300047472 Bacteria 77634
209 Ga0496116_0000007 3300048919 Bacteria 795464
210 Ga0496116_0048103 3300048919 Bacteria 2864
211 Ga0496117_0003856 3300048920 Bacteria 17063
212 Ga0496117_0030972 3300048920 Bacteria 4092
213 Ga0496118_0013508 3300048921 Bacteria 7715
214 Ga0496119_0000013 3300048922 Bacteria 323820
215 Ga0496120_0037883 3300048923 Bacteria 2858
216 Ga0496120_0041273 3300048923 Bacteria 2704
217 Ga0496122_0080178 3300048925 Bacteria 2277
218 Ga0496123_0023872 3300048926 Bacteria 4668
219 Ga0496124_0000049 3300048927 Bacteria 269753
220 Ga0496124_0001183 3300048927 Bacteria 40695
221 Ga0496125_0017849 3300048928 Bacteria 6752
222 Ga0496126_0071648 3300048929 Bacteria 3084
223 Ga0495682_0000011 3300049460 Bacteria 278474
224 Ga0501298_000050 3300049521 Bacteria 12164
225 Ga0501031_0001894 3300049568 Bacteria 13194
226 Ga0501034_0025155 3300049571 Bacteria 6059
227 Ga0501034_0157214 3300049571 Bacteria 2246
228 Ga0501036_0011813 3300049572 Bacteria 7237
229 Ga0501036_0038784 3300049572 Bacteria 4033
230 Ga0501037_0014479 3300049573 Bacteria 5805
231 Ga0501037_0034451 3300049573 Bacteria 3736
232 Ga0501038_0128675 3300049574 Bacteria 2081
233 Ga0501039_0133522 3300049575 Bacteria 1948
234 Ga0501043_0009348 3300049579 Bacteria 7699
235 Ga0501046_0006163 3300049580 Bacteria 10648
236 Ga0501047_0044963 3300049581 Bacteria 4268
237 Ga0501198_003775 3300049649 Bacteria 2085
238 Ga0501202_004811 3300049652 Bacteria 2375
239 Ga0501207_001004 3300049654 Bacteria 3432
240 Ga0501217_003047 3300049661 Bacteria 3355
241 Ga0501222_000713 3300049662 Bacteria 4847
242 Ga0501223_002854 3300049663 Bacteria 3791
243 Ga0501228_002500 3300049666 Bacteria 1446
244 Ga0501233_001181 3300049668 Bacteria 4444
245 Ga0501250_000723 3300049680 Bacteria 2402
246 Ga0501257_015572 3300049686 Bacteria 1757
247 Ga0501259_000567 3300049688 Bacteria 5901
248 Ga0501261_000854 3300049690 Bacteria 3778
249 Ga0501219_000242 3300049703 Bacteria 10088
250 Ga0501221_001887 3300049704 Bacteria 3495
251 Ga0501225_0011077 3300049705 Bacteria 2542
252 Ga0501234_004573 3300049707 Bacteria 2176
253 Ga0501279_001658 3300049775 Bacteria 2927
254 Ga0501035_0002418 3300049822 Bacteria 18265
255 Ga0501035_0042057 3300049822 Bacteria 4123
256 Ga0501044_0032748 3300049823 Bacteria 5463
257 Ga0501044_0133701 3300049823 Bacteria 2473
258 nmdc:mga0k408_49548_c1 3300050493 Bacteria 2431
259 nmdc:mga05p37_105267_c1 3300050507 Bacteria 3471
260 nmdc:mga05p37_107777_c1 3300050507 Bacteria 3427
261 nmdc:mga0qj67_8429_c1 3300050509 Bacteria 7648
262 nmdc:mga06r32_11015_c1 3300050510 Bacteria 8140
263 Ga0500641_0046427 3300053096 Unclassified 1773
264 Ga0500621_000005 3300053126 Bacteria 320383
265 Ga0500642_0034023 3300053130 Unclassified 2152
266 Ga0500616_0001059 3300053153 Bacteria 28979
267 Ga0500616_0003892 3300053153 Bacteria 10981

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025944 Ga0207661_10295617 Ga0207661_102956172 337
2 3300009553 Ga0105249_10019996 Ga0105249_100199964 343
3 3300014968 Ga0157379_10058082 Ga0157379_100580823 343
4 3300005329 Ga0070683_100002538 Ga0070683_10000253812 364
5 3300005535 Ga0070684_100047383 Ga0070684_1000473833 364
6 3300013307 Ga0157372_10005711 Ga0157372_1000571110 364
7 3300025944 Ga0207661_10003918 Ga0207661_100039184 364
8 3300053153 Ga0500616_0003892 Ga0500616_0003892_3615_4712 365
9 3300013296 Ga0157374_10078459 Ga0157374_100784592 366
10 3300005564 Ga0070664_100002124 Ga0070664_10000212417 368
11 3300025945 Ga0207679_10059158 Ga0207679_100591582 368
12 3300009545 Ga0105237_10292918 Ga0105237_102929182 372
13 3300037471 Ga0395905_0151507 Ga0395905_0151507_46_1215 373
14 3300009174 Ga0105241_10130002 Ga0105241_101300023 374
15 3300021384 Ga0213876_10004339 Ga0213876_100043391 374
16 3300025913 Ga0207695_10000010 Ga0207695_10000010546 374
17 3300005341 Ga0070691_10056706 Ga0070691_100567062 375
18 3300049521 Ga0501298_000050 Ga0501298_000050_2291_3427 376
19 3300003323 rootH1_10113418 rootH1_101134184 377
20 3300044901 Ga0466960_0103575 Ga0466960_0103575_221_1390 377
21 3300049703 Ga0501219_000242 Ga0501219_000242_7940_9073 377
22 3300003761 Ga0055535_1002113 Ga0055535_10021132 378
23 3300003762 Ga0055542_1002078 Ga0055542_10020782 378
24 3300025242 Ga0209258_100312 Ga0209258_10031215 378
25 3300025254 Ga0209148_1000536 Ga0209148_100053615 378
26 3300047472 Ga0495686_0000335 Ga0495686_0000335_17205_18341 378
27 3300049822 Ga0501035_0042057 Ga0501035_0042057_325_1461 378
28 3300005336 Ga0070680_100005347 Ga0070680_1000053477 379
29 3300005339 Ga0070660_100024265 Ga0070660_1000242652 379
30 3300005366 Ga0070659_100024998 Ga0070659_1000249984 379
31 3300005530 Ga0070679_100055173 Ga0070679_1000551732 379
32 3300005539 Ga0068853_100035366 Ga0068853_1000353661 379
33 3300005563 Ga0068855_100014952 Ga0068855_10001495210 379
34 3300013100 Ga0157373_10031714 Ga0157373_100317142 379
35 3300013102 Ga0157371_10120329 Ga0157371_101203292 379
36 3300025919 Ga0207657_10015896 Ga0207657_100158965 379
37 3300025932 Ga0207690_10077454 Ga0207690_100774542 379
38 3300025949 Ga0207667_10417368 Ga0207667_104173681 379
39 3300026041 Ga0207639_10089046 Ga0207639_100890463 379
40 3300046616 Ga0495668_0001096 Ga0495668_0001096_19662_20801 379
41 3300053096 Ga0500641_0046427 Ga0500641_0046427_417_1556 379
42 3300053130 Ga0500642_0034023 Ga0500642_0034023_573_1712 379
43 3300053153 Ga0500616_0001059 Ga0500616_0001059_21185_22324 379
44 iso_pu_bacteria 2904504865 2904506701 379
45 3300013102 Ga0157371_10008533 Ga0157371_100085332 381
46 3300046507 Ga0495606_0000811 Ga0495606_0000811_17051_18256 381
47 3300005329 Ga0070683_100120349 Ga0070683_1001203493 382
48 3300005339 Ga0070660_100132900 Ga0070660_1001329002 382
49 3300013102 Ga0157371_10071942 Ga0157371_100719423 382
50 3300013105 Ga0157369_10017508 Ga0157369_100175088 382
51 3300025919 Ga0207657_10057416 Ga0207657_100574166 382
52 3300025921 Ga0207652_10035803 Ga0207652_100358032 382
53 3300039062 Ga0400483_175292 Ga0400483_175292_107_1261 382
54 iso_pu_bacteria 2506520007 2506579918 382
55 iso_pu_bacteria 2506520008 2506585057 382
56 iso_pu_bacteria 2537561728 2538425626 382
57 iso_pu_bacteria 2547132181 2547697752 382
58 iso_pu_bacteria 2561511199 2562463830 382
59 iso_pu_bacteria 2600255256 2601536257 382
60 iso_pu_bacteria 2600255257 2601541637 382
61 iso_pu_bacteria 2600255310 2601759988 382
62 iso_pu_bacteria 2600255311 2601765398 382
63 iso_pu_bacteria 2602042046 2603636605 382
64 iso_pu_bacteria 2654587920 2656275579 382
65 iso_pu_bacteria 2671180115 2671587180 382
66 iso_pu_bacteria 2687453601 2689446447 382
67 iso_pu_bacteria 2711768156 2712472839 382
68 iso_pu_bacteria 2772190666 2772440334 382
69 iso_pu_bacteria 2791355010 2792311799 382
70 iso_pu_bacteria 2811995292 2813727617 382
71 iso_pu_bacteria 2814123068 2814695164 382
72 iso_pu_bacteria 2846540461 2846542817 382
73 iso_pu_bacteria 2852103415 2852107330 382
74 iso_pu_bacteria 2869551831 2869555798 382
75 iso_pu_bacteria 2888366609 2888370440 382
76 iso_pu_bacteria 2932406140 2932409198 382
77 iso_pu_bacteria 2935625433 2935625482 382
78 iso_pu_bacteria 2937967321 2937971926 382
79 iso_pu_bacteria 2939577877 2939580856 382
80 iso_pu_bacteria 2939617950 2939618779 382
81 iso_pu_bacteria 2974435778 2974439584 382
82 iso_pu_bacteria 3000376612 3000378157 382
83 iso_pu_bacteria 8004592986 8004594630 382
84 iso_pu_bacteria 8015394850 8015399316 382
85 iso_pu_bacteria 8019504834 8019504883 382
86 iso_pu_bacteria 8054844752 8054846832 382
87 3300009092 Ga0105250_10000011 Ga0105250_10000011157 383
88 3300025711 Ga0207696_1000026 Ga0207696_1000026103 383
89 3300041997 Ga0439431_0002660 Ga0439431_0002660_1190_2344 383
90 iso_pu_bacteria 2883068021 2883070017 383
91 iso_pu_bacteria 2839989709 2839992367 384
92 3300013102 Ga0157371_10002223 Ga0157371_1000222316 385
93 3300013102 Ga0157371_10025594 Ga0157371_100255944 385
94 3300013104 Ga0157370_10034339 Ga0157370_100343394 385
95 3300013104 Ga0157370_10329993 Ga0157370_103299931 385
96 3300031691 Ga0316579_10045473 Ga0316579_100454732 385
97 3300035398 Ga0316574_0113888 Ga0316574_0113888_266_1429 385
98 iso_pu_bacteria 2896109856 2896114301 385
99 3300002773 JGI25152J39213_1000988 JGI25152J39213_100098812 386
100 3300003578 Ga0006562J51391_1031952 Ga0006562J51391_10319522 386
101 3300005327 Ga0070658_10038792 Ga0070658_100387922 386
102 3300005354 Ga0070675_100053118 Ga0070675_1000531181 386
103 3300005718 Ga0068866_10105102 Ga0068866_101051022 386
104 3300006946 Ga0079104_1000201 Ga0079104_100020112 386
105 3300006946 Ga0079104_1003969 Ga0079104_10039694 386
106 3300009011 Ga0105251_10000095 Ga0105251_1000009530 386
107 3300009011 Ga0105251_10001934 Ga0105251_1000193413 386
108 3300009036 Ga0105244_10013863 Ga0105244_100138634 386
109 3300009092 Ga0105250_10001277 Ga0105250_1000127712 386
110 3300009101 Ga0105247_10000048 Ga0105247_1000004830 386
111 3300009174 Ga0105241_10000011 Ga0105241_10000011144 386
112 3300013100 Ga0157373_10011798 Ga0157373_100117984 386
113 3300013102 Ga0157371_10050853 Ga0157371_100508532 386
114 3300013105 Ga0157369_10027340 Ga0157369_100273405 386
115 3300013307 Ga0157372_10002107 Ga0157372_100021073 386
116 3300014497 Ga0182008_10006234 Ga0182008_100062345 386
117 3300017792 Ga0163161_10000005 Ga0163161_10000005164 386
118 3300025258 Ga0209129_1000104 Ga0209129_100010445 386
119 3300025711 Ga0207696_1000039 Ga0207696_1000039130 386
120 3300025711 Ga0207696_1001162 Ga0207696_10011628 386
121 3300025728 Ga0207655_1003998 Ga0207655_10039989 386
122 3300025735 Ga0207713_1000086 Ga0207713_1000086114 386
123 3300025735 Ga0207713_1000180 Ga0207713_100018032 386
124 3300025900 Ga0207710_10000026 Ga0207710_10000026114 386
125 3300025911 Ga0207654_10000012 Ga0207654_10000012144 386
126 3300027111 Ga0209281_1000079 Ga0209281_1000079164 386
127 3300027111 Ga0209281_1000184 Ga0209281_1000184117 386
128 3300027312 Ga0209371_1000015 Ga0209371_1000015576 386
129 3300027312 Ga0209371_1000221 Ga0209371_100022164 386
130 3300027312 Ga0209371_1000867 Ga0209371_100086712 386
131 3300027312 Ga0209371_1001808 Ga0209371_10018087 386
132 3300027312 Ga0209371_1004154 Ga0209371_10041545 386
133 3300030500 Ga0268256_1000018 Ga0268256_100001847 386
134 3300030500 Ga0268256_1000296 Ga0268256_100029645 386
135 3300030500 Ga0268256_1000482 Ga0268256_100048212 386
136 3300030500 Ga0268256_1002378 Ga0268256_10023785 386
137 3300042004 Ga0439445_0011945 Ga0439445_0011945_89_1249 386
138 3300042010 Ga0439452_000036 Ga0439452_000036_48567_49781 386
139 3300046458 Ga0495591_002670 Ga0495591_002670_1295_2500 386
140 3300046471 Ga0495650_0000149 Ga0495650_0000149_82327_83532 386
141 3300046513 Ga0495616_0016495 Ga0495616_0016495_232_1437 386
142 3300046522 Ga0495643_0095189 Ga0495643_0095189_136_1341 386
143 3300046524 Ga0495648_0014421 Ga0495648_0014421_1520_2725 386
144 3300046530 Ga0495654_0000055 Ga0495654_0000055_69060_70265 386
145 3300046542 Ga0495597_0000704 Ga0495597_0000704_3103_4317 386
146 3300046691 Ga0495670_0100612 Ga0495670_0100612_135_1295 386
147 3300046692 Ga0495671_0003971 Ga0495671_0003971_7409_8614 386
148 3300046694 Ga0495649_0061814 Ga0495649_0061814_229_1434 386
149 3300046810 Ga0495660_0000017 Ga0495660_0000017_243088_244293 386
150 3300047320 Ga0495672_0000001 Ga0495672_0000001_1381090_1382295 386
151 3300047469 Ga0495673_0000019 Ga0495673_0000019_476897_478102 386
152 3300048919 Ga0496116_0000007 Ga0496116_0000007_677162_678376 386
153 3300048919 Ga0496116_0048103 Ga0496116_0048103_1243_2457 386
154 3300048920 Ga0496117_0003856 Ga0496117_0003856_15604_16818 386
155 3300048920 Ga0496117_0030972 Ga0496117_0030972_742_1956 386
156 3300048921 Ga0496118_0013508 Ga0496118_0013508_1255_2469 386
157 3300048922 Ga0496119_0000013 Ga0496119_0000013_274264_275478 386
158 3300048923 Ga0496120_0037883 Ga0496120_0037883_342_1556 386
159 3300048923 Ga0496120_0041273 Ga0496120_0041273_68_1282 386
160 3300048925 Ga0496122_0080178 Ga0496122_0080178_938_2152 386
161 3300048926 Ga0496123_0023872 Ga0496123_0023872_380_1594 386
162 3300048927 Ga0496124_0000049 Ga0496124_0000049_136177_137391 386
163 3300048927 Ga0496124_0001183 Ga0496124_0001183_32_1246 386
164 3300048928 Ga0496125_0017849 Ga0496125_0017849_3297_4511 386
165 3300048929 Ga0496126_0071648 Ga0496126_0071648_190_1404 386
166 3300049460 Ga0495682_0000011 Ga0495682_0000011_87831_89036 386
167 3300053126 Ga0500621_000005 Ga0500621_000005_242489_243694 386
168 3300005293 Ga0065715_10133656 Ga0065715_101336561 387
169 3300005331 Ga0070670_100017724 Ga0070670_1000177243 387
170 3300005354 Ga0070675_100112528 Ga0070675_1001125282 387
171 3300005355 Ga0070671_100082987 Ga0070671_1000829873 387
172 3300005355 Ga0070671_100085424 Ga0070671_1000854243 387
173 3300005539 Ga0068853_100157309 Ga0068853_1001573092 387
174 3300005563 Ga0068855_100046588 Ga0068855_1000465887 387
175 3300005577 Ga0068857_100087011 Ga0068857_1000870112 387
176 3300005616 Ga0068852_100018912 Ga0068852_1000189124 387
177 3300005834 Ga0068851_10018243 Ga0068851_100182434 387
178 3300006844 Ga0075428_100005986 Ga0075428_1000059868 387
179 3300006846 Ga0075430_100002230 Ga0075430_10000223014 387
180 3300006847 Ga0075431_100006619 Ga0075431_10000661910 387
181 3300006880 Ga0075429_100037770 Ga0075429_1000377703 387
182 3300009147 Ga0114129_10137209 Ga0114129_101372092 387
183 3300009174 Ga0105241_10006050 Ga0105241_100060507 387
184 3300013100 Ga0157373_10024488 Ga0157373_100244884 387
185 3300013102 Ga0157371_10149575 Ga0157371_101495752 387
186 3300013296 Ga0157374_10125846 Ga0157374_101258463 387
187 3300014326 Ga0157380_10013293 Ga0157380_100132932 387
188 3300014745 Ga0157377_10004078 Ga0157377_100040783 387
189 3300014969 Ga0157376_10104814 Ga0157376_101048143 387
190 3300025321 Ga0207656_10010333 Ga0207656_100103333 387
191 3300025925 Ga0207650_10002058 Ga0207650_100020589 387
192 3300025925 Ga0207650_10191551 Ga0207650_101915512 387
193 3300025926 Ga0207659_10078021 Ga0207659_100780213 387
194 3300025931 Ga0207644_10077091 Ga0207644_100770913 387
195 3300025940 Ga0207691_10111420 Ga0207691_101114203 387
196 3300025949 Ga0207667_10008349 Ga0207667_100083494 387
197 3300025981 Ga0207640_10161186 Ga0207640_101611861 387
198 3300026116 Ga0207674_10171723 Ga0207674_101717233 387
199 3300027111 Ga0209281_1000142 Ga0209281_100014255 387
200 3300031251 Ga0265327_10067148 Ga0265327_100671481 387
201 3300037471 Ga0395905_0309185 Ga0395905_0309185_43_1269 387
202 3300044656 Ga0466969_0000220 Ga0466969_0000220_28560_29723 387
203 3300044683 Ga0466965_0060645 Ga0466965_0060645_708_1871 387
204 3300044684 Ga0466966_0000215 Ga0466966_0000215_10721_11884 387
205 3300044712 Ga0453684_0201427 Ga0453684_0201427_679_1860 387
206 3300045049 Ga0466959_0000004 Ga0466959_0000004_65473_66636 387
207 3300049571 Ga0501034_0025155 Ga0501034_0025155_682_1854 387
208 3300049572 Ga0501036_0038784 Ga0501036_0038784_1655_2827 387
209 3300049573 Ga0501037_0034451 Ga0501037_0034451_1975_3147 387
210 3300049575 Ga0501039_0133522 Ga0501039_0133522_683_1855 387
211 3300049581 Ga0501047_0044963 Ga0501047_0044963_2507_3679 387
212 3300049649 Ga0501198_003775 Ga0501198_003775_611_1780 387
213 3300049652 Ga0501202_004811 Ga0501202_004811_497_1666 387
214 3300049654 Ga0501207_001004 Ga0501207_001004_1270_2439 387
215 3300049662 Ga0501222_000713 Ga0501222_000713_3393_4562 387
216 3300049663 Ga0501223_002854 Ga0501223_002854_472_1641 387
217 3300049666 Ga0501228_002500 Ga0501228_002500_194_1363 387
218 3300049668 Ga0501233_001181 Ga0501233_001181_807_1976 387
219 3300049688 Ga0501259_000567 Ga0501259_000567_2571_3740 387
220 3300049690 Ga0501261_000854 Ga0501261_000854_2478_3647 387
221 3300049704 Ga0501221_001887 Ga0501221_001887_2088_3257 387
222 3300049705 Ga0501225_0011077 Ga0501225_0011077_961_2130 387
223 3300049707 Ga0501234_004573 Ga0501234_004573_409_1578 387
224 3300049775 Ga0501279_001658 Ga0501279_001658_1522_2691 387
225 3300049822 Ga0501035_0002418 Ga0501035_0002418_554_1726 387
226 3300049823 Ga0501044_0032748 Ga0501044_0032748_649_1821 387
227 3300049823 Ga0501044_0133701 Ga0501044_0133701_845_2029 387
228 3300050507 nmdc:mga05p37_107777_c1 nmdc:mga05p37_107777_c1_768_1964 387
229 3300050509 nmdc:mga0qj67_8429_c1 nmdc:mga0qj67_8429_c1_1109_2305 387
230 3300050510 nmdc:mga06r32_11015_c1 nmdc:mga06r32_11015_c1_1835_3031 387
231 3300003320 rootH2_10118263 rootH2_101182632 388
232 3300031727 Ga0316576_10003639 Ga0316576_100036397 388
233 3300031728 Ga0316578_10004290 Ga0316578_100042905 388
234 3300035398 Ga0316574_0014785 Ga0316574_0014785_3023_4207 388
235 3300036712 Ga0316584_0046970 Ga0316584_0046970_593_1768 388
236 iso_pu_bacteria 2908669403 2908671483 388
237 2162886007 SwRhRL2b_contig_3330649 SwRhRL2b_0665.00003850 389
238 3300005288 Ga0065714_10088983 Ga0065714_100889832 389
239 3300005289 Ga0065704_10075692 Ga0065704_100756924 389
240 3300005331 Ga0070670_100008075 Ga0070670_1000080755 389
241 3300005331 Ga0070670_100039948 Ga0070670_1000399484 389
242 3300005354 Ga0070675_100097527 Ga0070675_1000975273 389
243 3300005466 Ga0070685_10024311 Ga0070685_100243115 389
244 3300005539 Ga0068853_100010663 Ga0068853_1000106635 389
245 3300005543 Ga0070672_100036847 Ga0070672_1000368474 389
246 3300005543 Ga0070672_100109567 Ga0070672_1001095672 389
247 3300005548 Ga0070665_100070679 Ga0070665_1000706794 389
248 3300005617 Ga0068859_100019004 Ga0068859_1000190045 389
249 3300005618 Ga0068864_100061871 Ga0068864_1000618712 389
250 3300005843 Ga0068860_100157616 Ga0068860_1001576163 389
251 3300006195 Ga0075366_10108661 Ga0075366_101086612 389
252 3300006237 Ga0097621_100000869 Ga0097621_10000086911 389
253 3300006237 Ga0097621_100025409 Ga0097621_1000254093 389
254 3300006237 Ga0097621_100192444 Ga0097621_1001924442 389
255 3300006358 Ga0068871_100000042 Ga0068871_10000004234 389
256 3300006358 Ga0068871_100015821 Ga0068871_1000158216 389
257 3300006931 Ga0097620_100019004 Ga0097620_1000190045 389
258 3300009093 Ga0105240_10000421 Ga0105240_1000042137 389
259 3300009147 Ga0114129_10027575 Ga0114129_100275754 389
260 3300009545 Ga0105237_10001036 Ga0105237_100010367 389
261 3300010375 Ga0105239_10000052 Ga0105239_10000052156 389
262 3300013104 Ga0157370_10001371 Ga0157370_1000137113 389
263 3300013297 Ga0157378_10014637 Ga0157378_100146375 389
264 3300013306 Ga0163162_10008050 Ga0163162_100080507 389
265 3300013306 Ga0163162_10167141 Ga0163162_101671413 389
266 3300014968 Ga0157379_10067030 Ga0157379_100670302 389
267 3300014968 Ga0157379_10183303 Ga0157379_101833031 389
268 3300017792 Ga0163161_10003202 Ga0163161_100032026 389
269 3300017792 Ga0163161_10058469 Ga0163161_100584692 389
270 3300025903 Ga0207680_10051913 Ga0207680_100519133 389
271 3300025913 Ga0207695_10000156 Ga0207695_10000156151 389
272 3300025924 Ga0207694_10026349 Ga0207694_100263493 389
273 3300025925 Ga0207650_10012161 Ga0207650_100121615 389
274 3300025925 Ga0207650_10135342 Ga0207650_101353421 389
275 3300025931 Ga0207644_10010901 Ga0207644_100109011 389
276 3300025936 Ga0207670_10047923 Ga0207670_100479234 389
277 3300025941 Ga0207711_10084393 Ga0207711_100843932 389
278 3300025944 Ga0207661_10369376 Ga0207661_103693761 389
279 3300025945 Ga0207679_10040829 Ga0207679_100408294 389
280 3300025986 Ga0207658_10008374 Ga0207658_100083746 389
281 3300025986 Ga0207658_10033093 Ga0207658_100330933 389
282 3300026041 Ga0207639_10013337 Ga0207639_100133377 389
283 3300026089 Ga0207648_10076656 Ga0207648_100766565 389
284 3300028379 Ga0268266_10161727 Ga0268266_101617272 389
285 3300030521 Ga0307511_10040902 Ga0307511_100409023 389
286 3300031616 Ga0307508_10003528 Ga0307508_100035283 389
287 3300031911 Ga0307412_10062627 Ga0307412_100626273 389
288 3300033180 Ga0307510_10001538 Ga0307510_100015385 389
289 3300037466 Ga0395898_0237316 Ga0395898_0237316_420_1652 389
290 3300039437 Ga0436365_1251897 Ga0436365_1251897_6825_8042 389
291 3300046507 Ga0495606_0002426 Ga0495606_0002426_1262_2458 389
292 3300047472 Ga0495686_0000010 Ga0495686_0000010_192569_193771 389
293 3300049568 Ga0501031_0001894 Ga0501031_0001894_10985_12181 389
294 3300049571 Ga0501034_0157214 Ga0501034_0157214_987_2183 389
295 3300049572 Ga0501036_0011813 Ga0501036_0011813_2715_3911 389
296 3300049573 Ga0501037_0014479 Ga0501037_0014479_3058_4254 389
297 3300049574 Ga0501038_0128675 Ga0501038_0128675_701_1897 389
298 3300049579 Ga0501043_0009348 Ga0501043_0009348_1433_2629 389
299 3300049580 Ga0501046_0006163 Ga0501046_0006163_1460_2656 389
300 3300049661 Ga0501217_003047 Ga0501217_003047_789_1979 389
301 3300049680 Ga0501250_000723 Ga0501250_000723_733_1923 389
302 3300049686 Ga0501257_015572 Ga0501257_015572_107_1297 389
303 3300050493 nmdc:mga0k408_49548_c1 nmdc:mga0k408_49548_c1_1117_2286 389
304 3300050507 nmdc:mga05p37_105267_c1 nmdc:mga05p37_105267_c1_1601_2785 389

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

6

369

0.96

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

45

190

0.84

PF01212

Beta_elim_lyase

Beta-eliminating lyase

41

294

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rtk-assembly1.cif.gz_A structure of the (niau)2 complex with n-terminal mutation of iscu2 y35d at 2.5 a resolution 0.985 4 387
5wkp-assembly1.cif.gz_E crystal structure of the human mitochondrial cysteine desulfurase in complex with isd11 and iron-sulfur cluster scaffold protein iscu1, and e. coli acp1 protein at 3.15a 0.9825 1 387
5wkp-assembly1.cif.gz_A crystal structure of the human mitochondrial cysteine desulfurase in complex with isd11 and iron-sulfur cluster scaffold protein iscu1, and e. coli acp1 protein at 3.15a 0.982 4 387
7mhv-assembly1.cif.gz_A-2 crystal structure of cysteine desulfurase nifs from legionella pneumophila philadelphia 1 in complex with pyridoxal 5'-phosphate 0.9811 5 384
4r5f-assembly1.cif.gz_A-2 x-ray structure of the d199k mutant of the cysteine desulfurase iscs from a. fulgidus 0.9796 6 383
ID Description Score Start End Superfamily
3lvjA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9831 17 262 3.40.640.10
af_Q2FXV4_28_254_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9806 31 260 3.40.640.10
4r5fA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9794 17 262 3.40.640.10
4r5fA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9754 17 262 3.40.640.10
3lvjA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9752 17 262 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A4Q3GLW5-F1-model_v4 deleted 0.9988 2 147
AF-A0A1B6IH21-F1-model_v4 Aminotransferase class V domain-containing protein 0.9973 13 192 GO:0005634
GO:0005739
GO:0005829
GO:0016226
GO:0031071
AF-A0A3B4B276-F1-model_v4 Aminotransferase class V domain-containing protein 0.9962 8 211 GO:0005634
GO:0005739
GO:0005829
GO:0016226
GO:0031071
AF-A0A022RZZ0-F1-model_v4 Aminotransferase class V domain-containing protein 0.9959 5 225 GO:0016226
AF-A0A5J6CA55-F1-model_v4 Putative cysteine desulfurase 0.9957 129 220 GO:0005739
GO:0005829
GO:0016226
GO:0031071
GO:0046872
GO:0051536

Feature Viewer

pLDDT pTM Quality
93.36 0.92 High
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Predicted Structure (AlphaFold2)

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