F397608

General Info

Members Datasets Scaffolds Average Seq Length
304 229 608 471

Family's Representative Sequence

Representative Sequence 3300025909|Ga0207705_10008297|Ga0207705_100082971
Length 575
Sequence MCCDVENLRCVSEFGNDGDGDEESEDRSYPVGGRHCIVPGQCTGGDADGASQRGDQPHRRVSAGCRVVMVLTLTYGVGVPHRRVKLVADGAELRAGFAAVREELGVPGEFSSSALEAAERAAQTPRLPQADLTDIGFVTIDPPGSMDLDQAMHISRLPRGYRVRYAIADVAAFVRPGDAVDLEAHTRGQTLYSPDTRTPLHPPALGEGAASLLPDRVRPALVWTIDLDDSGNQTEVDVARAMVRSRARLDYEGAQMSIDKATKSGKATTSNSDDDVLTLLAEVGKLRQQRETDRGAVSLRVPEQEVDVHGDGFRLSYRAPLPVEDWNAQISLLTGMAAAGLMLDAGVGILRTLPPPDQGAIDMLRRSAHVLGVEWPQSLTYQAFVRDLDPATDAGAALLELSTRLLRGAGYTAFDGAPPAQVEHSAVGAAYAHTTAPLRRLVDRYVGELCVAVCEGTEAPDWVRAGLSNLPTVMEVSDHRAHALERACIDLVEAVLLAPHVGETFEAAVVERNHHGGTVQLRNPPVRAKCDGDRLPLGEPLVVRLEKADPATRTLLFAPYDGRTADEPAGRPRHP

Samples

Sample ID Description Type Environment
1 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
102 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
103 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
104 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
105 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
106 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
107 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
108 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
109 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
110 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
111 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
112 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
116 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
117 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
118 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
119 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
120 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
121 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
122 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
123 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
124 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
125 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
126 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
127 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
136 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
142 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
143 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
144 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
145 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
146 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
171 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
172 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
173 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
176 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
177 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
178 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
179 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
180 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
181 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
183 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
184 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
185 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
186 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
187 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
188 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
189 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
190 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
191 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
192 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
194 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
195 2558860280 Kutzneria sp. 744 Isolate Unclassified
196 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
197 2643221576 Nocardioides sp. Root614 Isolate Unclassified
198 2643221590 Nocardioides sp. Root682 Isolate Unclassified
199 2738541305 Nocardioides sp. CF167 Isolate Unclassified
200 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
201 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
202 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
203 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
204 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
205 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
206 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
207 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
208 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
209 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
210 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
211 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
212 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
213 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
214 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
215 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
216 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
217 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
218 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
219 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
220 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
221 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
222 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
223 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
224 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
225 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
226 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
227 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
228 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
229 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.49
Metatranscriptomes 0
Isolates 11.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.3
Nodule 0
Rhizoplane 6.91
Rhizosphere 76.97
Stem 0
Stem Tuber 0.33
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207705_10008297 3300025909 Bacteria 7586
2 JGI24743J22301_10002498 3300001991 Bacteria 2780
3 JGI24738J21930_10002513 3300002075 Bacteria 4769
4 rootH2_10041886 3300003320 Bacteria 2899
5 rootH2_10069302 3300003320 Bacteria 7247
6 Ga0070658_10005007 3300005327 Bacteria 10788
7 Ga0070658_10010336 3300005327 Bacteria 7486
8 Ga0070658_10021487 3300005327 Bacteria 5172
9 Ga0070683_100010323 3300005329 Bacteria 8032
10 Ga0070683_100051447 3300005329 Bacteria 3814
11 Ga0070683_100112450 3300005329 Bacteria 2570
12 Ga0068869_100048897 3300005334 Bacteria 3060
13 Ga0068869_100105576 3300005334 Bacteria 2137
14 Ga0068868_100017333 3300005338 Bacteria 5363
15 Ga0070689_100069922 3300005340 Bacteria 2740
16 Ga0070691_10001401 3300005341 Bacteria 10298
17 Ga0070661_100165713 3300005344 Bacteria 1676
18 Ga0070692_10005538 3300005345 Bacteria 5397
19 Ga0070675_100034703 3300005354 Bacteria 4095
20 Ga0070671_100129713 3300005355 Bacteria 2123
21 Ga0070674_100152298 3300005356 Bacteria 1746
22 Ga0070673_100006669 3300005364 Bacteria 7527
23 Ga0070659_100007176 3300005366 Bacteria 8086
24 Ga0070700_100116618 3300005441 Bacteria 1783
25 Ga0070663_100002182 3300005455 Bacteria 10939
26 Ga0070663_100009656 3300005455 Bacteria 5985
27 Ga0070663_100131240 3300005455 Bacteria 1903
28 Ga0070678_100009681 3300005456 Bacteria 5854
29 Ga0070662_100057788 3300005457 Bacteria 2820
30 Ga0068867_100009535 3300005459 Bacteria 6842
31 Ga0070685_10109650 3300005466 Bacteria 1698
32 Ga0070679_100021235 3300005530 Bacteria 6335
33 Ga0070679_100042020 3300005530 Bacteria 4552
34 Ga0070679_100044665 3300005530 Bacteria 4415
35 Ga0070684_100002115 3300005535 Bacteria 14642
36 Ga0068853_100012689 3300005539 Bacteria 6860
37 Ga0068853_100013570 3300005539 Bacteria 6657
38 Ga0070672_100004363 3300005543 Bacteria 9263
39 Ga0070672_100218078 3300005543 Bacteria 1599
40 Ga0070695_100077459 3300005545 Bacteria 2191
41 Ga0070693_100021290 3300005547 Bacteria 3433
42 Ga0068855_100002851 3300005563 Bacteria 21250
43 Ga0070664_100018878 3300005564 Bacteria 5669
44 Ga0068856_100256557 3300005614 Bacteria 1763
45 Ga0070702_100001718 3300005615 Bacteria 9091
46 Ga0070702_100070328 3300005615 Bacteria 2065
47 Ga0068852_100004355 3300005616 Bacteria 9998
48 Ga0068852_100044844 3300005616 Bacteria 3759
49 Ga0068859_100035438 3300005617 Bacteria 5007
50 Ga0068864_100090213 3300005618 Bacteria 2702
51 Ga0068864_100144805 3300005618 Bacteria 2147
52 Ga0068851_10005902 3300005834 Bacteria 5575
53 Ga0081455_10000424 3300005937 Bacteria 55362
54 Ga0081455_10002481 3300005937 Bacteria 21933
55 Ga0081539_10003641 3300005985 Bacteria 18568
56 Ga0068865_100001519 3300006881 Bacteria 13526
57 Ga0097620_100035436 3300006931 Bacteria 5007
58 Ga0105240_10005270 3300009093 Bacteria 19309
59 Ga0111539_10169552 3300009094 Bacteria 2550
60 Ga0105245_10018892 3300009098 Bacteria 6032
61 Ga0105245_10070727 3300009098 Bacteria 3167
62 Ga0105245_10081935 3300009098 Bacteria 2951
63 Ga0105245_10150727 3300009098 Bacteria 2199
64 Ga0105247_10008825 3300009101 Bacteria 6144
65 Ga0114129_10224239 3300009147 Bacteria 2534
66 Ga0105243_10003576 3300009148 Bacteria 12550
67 Ga0105243_10013246 3300009148 Bacteria 6236
68 Ga0105243_10061514 3300009148 Bacteria 3003
69 Ga0105241_10043496 3300009174 Bacteria 3402
70 Ga0105242_10048738 3300009176 Bacteria 3444
71 Ga0105242_10151019 3300009176 Bacteria 2025
72 Ga0105238_10107625 3300009551 Bacteria 2769
73 Ga0105239_10036248 3300010375 Bacteria 5416
74 Ga0105246_10117182 3300011119 Bacteria 1967
75 Ga0157371_10013669 3300013102 Bacteria 6159
76 Ga0157370_10040492 3300013104 Bacteria 4498
77 Ga0157369_10002064 3300013105 Bacteria 24252
78 Ga0157374_10061165 3300013296 Bacteria 3526
79 Ga0157378_10038095 3300013297 Bacteria 4260
80 Ga0157372_10303776 3300013307 Bacteria 1856
81 Ga0157372_10388739 3300013307 Bacteria 1625
82 Ga0157375_10002700 3300013308 Bacteria 15351
83 Ga0157375_10125192 3300013308 Bacteria 2684
84 Ga0163163_10022341 3300014325 Bacteria 5987
85 Ga0163163_10031542 3300014325 Bacteria 5116
86 Ga0157377_10002038 3300014745 Bacteria 8858
87 Ga0157379_10134133 3300014968 Bacteria 2230
88 Ga0157376_10307697 3300014969 Bacteria 1502
89 Ga0183367_1009 3300015688 Bacteria 484598
90 Ga0207688_10001569 3300025901 Bacteria 12052
91 Ga0207688_10006038 3300025901 Bacteria 6592
92 Ga0207645_10042163 3300025907 Bacteria 2920
93 Ga0207645_10119514 3300025907 Bacteria 1710
94 Ga0207643_10004051 3300025908 Bacteria 7885
95 Ga0207705_10033243 3300025909 Bacteria 3684
96 Ga0207705_10061826 3300025909 Bacteria 2705
97 Ga0207695_10107448 3300025913 Bacteria 2776
98 Ga0207657_10005461 3300025919 Bacteria 13271
99 Ga0207649_10110355 3300025920 Bacteria 1836
100 Ga0207652_10050344 3300025921 Bacteria 3569
101 Ga0207652_10153586 3300025921 Bacteria 2062
102 Ga0207681_10116949 3300025923 Bacteria 1949
103 Ga0207659_10004675 3300025926 Bacteria 8294
104 Ga0207687_10007834 3300025927 Bacteria 7003
105 Ga0207687_10017687 3300025927 Bacteria 4698
106 Ga0207687_10037844 3300025927 Bacteria 3294
107 Ga0207690_10040189 3300025932 Bacteria 3056
108 Ga0207706_10004721 3300025933 Bacteria 12757
109 Ga0207706_10011782 3300025933 Bacteria 7963
110 Ga0207686_10027127 3300025934 Bacteria 3351
111 Ga0207686_10029683 3300025934 Bacteria 3229
112 Ga0207709_10004500 3300025935 Bacteria 8042
113 Ga0207669_10140058 3300025937 Bacteria 1678
114 Ga0207691_10006702 3300025940 Bacteria 11108
115 Ga0207691_10009219 3300025940 Bacteria 9472
116 Ga0207689_10007665 3300025942 Bacteria 9454
117 Ga0207689_10046752 3300025942 Bacteria 3576
118 Ga0207689_10106687 3300025942 Bacteria 2301
119 Ga0207661_10020634 3300025944 Bacteria 4928
120 Ga0207679_10013251 3300025945 Bacteria 5404
121 Ga0207667_10068218 3300025949 Bacteria 3704
122 Ga0207667_10158758 3300025949 Bacteria 2326
123 Ga0207651_10064051 3300025960 Bacteria 2571
124 Ga0207651_10082649 3300025960 Bacteria 2319
125 Ga0207668_10014108 3300025972 Bacteria 4940
126 Ga0207640_10010593 3300025981 Bacteria 5200
127 Ga0207677_10016110 3300026023 Bacteria 4418
128 Ga0207639_10017644 3300026041 Bacteria 5060
129 Ga0207678_10000391 3300026067 Bacteria 39957
130 Ga0207678_10022366 3300026067 Bacteria 5538
131 Ga0207678_10048752 3300026067 Bacteria 3661
132 Ga0207708_10002783 3300026075 Bacteria 12851
133 Ga0207708_10060036 3300026075 Bacteria 2903
134 Ga0207702_10075035 3300026078 Bacteria 2921
135 Ga0207648_10029541 3300026089 Bacteria 4861
136 Ga0207648_10054584 3300026089 Bacteria 3489
137 Ga0207648_10070058 3300026089 Bacteria 3056
138 Ga0207674_10041779 3300026116 Bacteria 4740
139 Ga0207675_100119952 3300026118 Bacteria 2488
140 Ga0207683_10005274 3300026121 Bacteria 11092
141 Ga0207683_10014973 3300026121 Bacteria 6601
142 Ga0207683_10145352 3300026121 Bacteria 2138
143 Ga0207683_10147093 3300026121 Bacteria 2125
144 Ga0207698_10032792 3300026142 Bacteria 3767
145 Ga0268266_10290467 3300028379 Bacteria 1523
146 Ga0307517_10014340 3300028786 Bacteria 10653
147 Ga0307515_10000140 3300028794 Bacteria 172330
148 Ga0307515_10023232 3300028794 Bacteria 10878
149 Ga0307511_10000459 3300030521 Bacteria 44012
150 Ga0307511_10001208 3300030521 Bacteria 27429
151 Ga0307512_10001964 3300030522 Bacteria 27450
152 Ga0265340_10019376 3300031247 Bacteria 3503
153 Ga0307509_10023942 3300031507 Bacteria 6844
154 Ga0307509_10032690 3300031507 Bacteria 5732
155 Ga0307509_10135762 3300031507 Bacteria 2406
156 Ga0307508_10040030 3300031616 Bacteria 4210
157 Ga0307508_10082174 3300031616 Bacteria 2803
158 Ga0307516_10031440 3300031730 Bacteria 5350
159 Ga0307518_10000241 3300031838 Bacteria 41161
160 Ga0326468_10000215 3300031889 Bacteria 5987
161 Ga0307415_100036331 3300032126 Bacteria 3227
162 Ga0307507_10010614 3300033179 Bacteria 11856
163 Ga0307507_10013567 3300033179 Bacteria 9868
164 Ga0307507_10016424 3300033179 Bacteria 8610
165 Ga0307510_10001802 3300033180 Bacteria 23942
166 Ga0373959_0009233 3300034820 Bacteria 1696
167 Ga0373947_0070640 3300035725 Bacteria 2140
168 Ga0395901_0137028 3300038443 Bacteria 2572
169 Ga0439436_0003505 3300041404 Bacteria 4771
170 Ga0450903_001512 3300042138 Bacteria 4338
171 Ga0439446_0002446 3300042156 Bacteria 4455
172 Ga0439434_0003845 3300042435 Bacteria 4389
173 Ga0466969_0009727 3300044656 Bacteria 5096
174 Ga0466966_0001060 3300044684 Bacteria 17570
175 Ga0466966_0016233 3300044684 Bacteria 4923
176 Ga0466970_0003459 3300044765 Bacteria 7692
177 Ga0466970_0036926 3300044765 Bacteria 2588
178 Ga0466959_0002443 3300045049 Bacteria 11874
179 Ga0466967_0000934 3300045976 Bacteria 15748
180 Ga0495629_0007829 3300046459 Bacteria 7859
181 Ga0495651_0004157 3300046462 Bacteria 11088
182 Ga0495662_0002659 3300046476 Bacteria 9025
183 Ga0495664_0007575 3300046477 Bacteria 6035
184 Ga0495628_0030016 3300046516 Bacteria 4404
185 Ga0495630_0175124 3300046517 Bacteria 1635
186 Ga0495652_0021536 3300046529 Bacteria 5729
187 Ga0495640_0035056 3300046533 Bacteria 3554
188 Ga0495586_0049193 3300046535 Bacteria 2279
189 Ga0495587_0009939 3300046536 Bacteria 6073
190 Ga0495645_0074596 3300046543 Bacteria 2442
191 Ga0495657_0003462 3300046675 Bacteria 12871
192 Ga0495646_0001907 3300046680 Bacteria 12538
193 Ga0495658_0038532 3300046683 Bacteria 2648
194 Ga0495613_0002464 3300046689 Bacteria 13948
195 Ga0495671_0020715 3300046692 Bacteria 3463
196 Ga0495604_0001334 3300047317 Bacteria 20183
197 Ga0495676_0016392 3300047321 Bacteria 6580
198 Ga0495676_0063960 3300047321 Bacteria 2865
199 Ga0495687_002755 3300047443 Bacteria 13618
200 Ga0495681_0000564 3300047470 Bacteria 28348
201 Ga0495593_0004464 3300047673 Bacteria 8313
202 Ga0495614_0004239 3300048089 Bacteria 6460
203 Ga0495614_0006196 3300048089 Bacteria 5375
204 Ga0496101_0061466 3300048904 Bacteria 2728
205 Ga0496101_0105918 3300048904 Bacteria 2111
206 Ga0496102_0044180 3300048905 Bacteria 4043
207 Ga0496104_0143866 3300048907 Bacteria 2290
208 Ga0496105_0070564 3300048908 Bacteria 2888
209 Ga0496106_0146936 3300048909 Bacteria 1858
210 Ga0496106_0175668 3300048909 Bacteria 1699
211 Ga0496107_0017560 3300048910 Bacteria 5032
212 Ga0496108_0000096 3300048911 Bacteria 91615
213 Ga0496108_0033100 3300048911 Bacteria 4294
214 Ga0496108_0067456 3300048911 Bacteria 3018
215 Ga0496108_0080302 3300048911 Bacteria 2762
216 Ga0496109_0162438 3300048912 Bacteria 2093
217 Ga0496110_0008285 3300048913 Bacteria 8360
218 Ga0496110_0072926 3300048913 Bacteria 3047
219 Ga0496110_0148604 3300048913 Bacteria 2120
220 Ga0496111_0107243 3300048914 Bacteria 2056
221 Ga0496111_0115673 3300048914 Bacteria 1977
222 Ga0496112_0010791 3300048915 Bacteria 8310
223 Ga0496113_0037173 3300048916 Bacteria 3571
224 Ga0496114_0047531 3300048917 Bacteria 3569
225 Ga0501032_0007106 3300049569 Bacteria 8198
226 Ga0501034_0123899 3300049571 Bacteria 2570
227 Ga0501036_0027564 3300049572 Bacteria 4800
228 Ga0501036_0048746 3300049572 Bacteria 3586
229 Ga0501036_0056876 3300049572 Bacteria 3314
230 Ga0501037_0032904 3300049573 Bacteria 3831
231 Ga0501038_0003141 3300049574 Bacteria 15410
232 Ga0501038_0087265 3300049574 Bacteria 2620
233 Ga0501040_0033342 3300049576 Bacteria 3488
234 Ga0501042_0037571 3300049578 Bacteria 3437
235 Ga0501042_0066509 3300049578 Bacteria 2576
236 Ga0501043_0052578 3300049579 Bacteria 3198
237 Ga0501046_0006194 3300049580 Bacteria 10622
238 Ga0501046_0013550 3300049580 Bacteria 6898
239 Ga0501047_0033336 3300049581 Bacteria 4970
240 Ga0501048_0051286 3300049582 Bacteria 2937
241 Ga0501069_0010522 3300049585 Bacteria 4899
242 Ga0501070_0025541 3300049586 Bacteria 4955
243 Ga0501070_0054591 3300049586 Bacteria 3313
244 Ga0501070_0055398 3300049586 Bacteria 3286
245 Ga0501070_0164948 3300049586 Bacteria 1826
246 Ga0501071_0064281 3300049587 Bacteria 2662
247 Ga0501072_0044095 3300049588 Bacteria 3507
248 Ga0501074_0029735 3300049590 Bacteria 3958
249 Ga0501074_0031658 3300049590 Bacteria 3832
250 Ga0501075_0173031 3300049591 Bacteria 1648
251 Ga0501076_0010811 3300049592 Bacteria 6786
252 Ga0501077_0045442 3300049593 Bacteria 2790
253 Ga0501079_0083371 3300049741 Bacteria 2473
254 Ga0501080_0143858 3300049742 Bacteria 2204
255 Ga0501081_0118781 3300049743 Bacteria 1881
256 Ga0501044_0078519 3300049823 Bacteria 3344
257 Ga0501045_0082184 3300049824 Bacteria 2376
258 nmdc:mga05p37_103350_c1 3300050507 Bacteria 3507
259 nmdc:mga06r32_36666_c1 3300050510 Bacteria 4636
260 nmdc:mga08y16_243090_c1 3300050511 Bacteria 1860
261 Ga0500643_000105 3300053087 Bacteria 87542
262 Ga0500644_0036612 3300053088 Bacteria 1598
263 Ga0500646_0000366 3300053090 Bacteria 13693
264 Ga0500640_007489 3300053095 Bacteria 4254
265 Ga0500560_002576 3300053107 Bacteria 3495
266 Ga0500568_0001444 3300053139 Bacteria 15307
267 Ga0500600_0077648 3300053149 Bacteria 1804
268 Ga0501082_0009404 3300060353 Bacteria 8415
269 Ga0530510_0092609 3300061734 Bacteria 2206
270 2559426854 2558860280 Bacteria 11429938
271 2586064015 2585427649 Bacteria 9053857
272 2643891261 2643221576 Bacteria 5214352
273 2643960309 2643221590 Bacteria 5214697
274 2738870166 2738541305 Bacteria 4910150
275 2753075991 2751185734 Bacteria 8863695
276 2774391759 2773857762 Bacteria 5971770
277 2776370436 2775506925 Bacteria 7237746
278 2785344724 2784746763 Bacteria 9783172
279 2785368183 2784746768 Bacteria 10036182
280 2791916624 2791354901 Bacteria 8322202
281 2809197445 2808606439 Bacteria 5952208
282 2809586735 2808606522 Bacteria 9488490
283 2812352342 2811994878 Bacteria 5992952
284 2861523146 2861520306 Bacteria 8348283
285 2862288489 2862281513 Bacteria 9621493
286 2862295789 2862290372 Bacteria 7471434
287 2863071724 2863067949 Bacteria 8541735
288 2866555926 2866552031 Bacteria 5824618
289 2866618613 2866612099 Bacteria 7543886
290 2870729238 2870721527 Bacteria 9689237
291 2877682398 2877676314 Bacteria 9512378
292 2891970004 2891968417 Bacteria 5821697
293 2899360349 2899359706 Bacteria 10940472
294 2899372709 2899370129 Bacteria 6781179
295 2915776101 2915768154 Bacteria 8424322
296 2917740525 2917736166 Bacteria 9690793
297 2954004083 2954002825 Bacteria 9173742
298 2954387528 2954380949 Bacteria 10050426
299 2954698373 2954691527 Bacteria 10720516
300 2954703859 2954701450 Bacteria 10834262
301 8003322225 8003314358 Bacteria 10575343
302 8047720015 8047710418 Bacteria 11023148
303 8048408812 8048406513 Bacteria 8936924
304 8056210931 8056207758 Bacteria 8639239
305 Ga0207705_10008297
306 JGI24743J22301_10002498
307 JGI24738J21930_10002513
308 rootH2_10041886
309 rootH2_10069302
310 Ga0070658_10005007
311 Ga0070658_10010336
312 Ga0070658_10021487
313 Ga0070683_100010323
314 Ga0070683_100051447
315 Ga0070683_100112450
316 Ga0068869_100048897
317 Ga0068869_100105576
318 Ga0068868_100017333
319 Ga0070689_100069922
320 Ga0070691_10001401
321 Ga0070661_100165713
322 Ga0070692_10005538
323 Ga0070675_100034703
324 Ga0070671_100129713
325 Ga0070674_100152298
326 Ga0070673_100006669
327 Ga0070659_100007176
328 Ga0070700_100116618
329 Ga0070663_100002182
330 Ga0070663_100009656
331 Ga0070663_100131240
332 Ga0070678_100009681
333 Ga0070662_100057788
334 Ga0068867_100009535
335 Ga0070685_10109650
336 Ga0070679_100021235
337 Ga0070679_100042020
338 Ga0070679_100044665
339 Ga0070684_100002115
340 Ga0068853_100012689
341 Ga0068853_100013570
342 Ga0070672_100004363
343 Ga0070672_100218078
344 Ga0070695_100077459
345 Ga0070693_100021290
346 Ga0068855_100002851
347 Ga0070664_100018878
348 Ga0068856_100256557
349 Ga0070702_100001718
350 Ga0070702_100070328
351 Ga0068852_100004355
352 Ga0068852_100044844
353 Ga0068859_100035438
354 Ga0068864_100090213
355 Ga0068864_100144805
356 Ga0068851_10005902
357 Ga0081455_10000424
358 Ga0081455_10002481
359 Ga0081539_10003641
360 Ga0068865_100001519
361 Ga0097620_100035436
362 Ga0105240_10005270
363 Ga0111539_10169552
364 Ga0105245_10018892
365 Ga0105245_10070727
366 Ga0105245_10081935
367 Ga0105245_10150727
368 Ga0105247_10008825
369 Ga0114129_10224239
370 Ga0105243_10003576
371 Ga0105243_10013246
372 Ga0105243_10061514
373 Ga0105241_10043496
374 Ga0105242_10048738
375 Ga0105242_10151019
376 Ga0105238_10107625
377 Ga0105239_10036248
378 Ga0105246_10117182
379 Ga0157371_10013669
380 Ga0157370_10040492
381 Ga0157369_10002064
382 Ga0157374_10061165
383 Ga0157378_10038095
384 Ga0157372_10303776
385 Ga0157372_10388739
386 Ga0157375_10002700
387 Ga0157375_10125192
388 Ga0163163_10022341
389 Ga0163163_10031542
390 Ga0157377_10002038
391 Ga0157379_10134133
392 Ga0157376_10307697
393 Ga0183367_1009
394 Ga0207688_10001569
395 Ga0207688_10006038
396 Ga0207645_10042163
397 Ga0207645_10119514
398 Ga0207643_10004051
399 Ga0207705_10033243
400 Ga0207705_10061826
401 Ga0207695_10107448
402 Ga0207657_10005461
403 Ga0207649_10110355
404 Ga0207652_10050344
405 Ga0207652_10153586
406 Ga0207681_10116949
407 Ga0207659_10004675
408 Ga0207687_10007834
409 Ga0207687_10017687
410 Ga0207687_10037844
411 Ga0207690_10040189
412 Ga0207706_10004721
413 Ga0207706_10011782
414 Ga0207686_10027127
415 Ga0207686_10029683
416 Ga0207709_10004500
417 Ga0207669_10140058
418 Ga0207691_10006702
419 Ga0207691_10009219
420 Ga0207689_10007665
421 Ga0207689_10046752
422 Ga0207689_10106687
423 Ga0207661_10020634
424 Ga0207679_10013251
425 Ga0207667_10068218
426 Ga0207667_10158758
427 Ga0207651_10064051
428 Ga0207651_10082649
429 Ga0207668_10014108
430 Ga0207640_10010593
431 Ga0207677_10016110
432 Ga0207639_10017644
433 Ga0207678_10000391
434 Ga0207678_10022366
435 Ga0207678_10048752
436 Ga0207708_10002783
437 Ga0207708_10060036
438 Ga0207702_10075035
439 Ga0207648_10029541
440 Ga0207648_10054584
441 Ga0207648_10070058
442 Ga0207674_10041779
443 Ga0207675_100119952
444 Ga0207683_10005274
445 Ga0207683_10014973
446 Ga0207683_10145352
447 Ga0207683_10147093
448 Ga0207698_10032792
449 Ga0268266_10290467
450 Ga0307517_10014340
451 Ga0307515_10000140
452 Ga0307515_10023232
453 Ga0307511_10000459
454 Ga0307511_10001208
455 Ga0307512_10001964
456 Ga0265340_10019376
457 Ga0307509_10023942
458 Ga0307509_10032690
459 Ga0307509_10135762
460 Ga0307508_10040030
461 Ga0307508_10082174
462 Ga0307516_10031440
463 Ga0307518_10000241
464 Ga0326468_10000215
465 Ga0307415_100036331
466 Ga0307507_10010614
467 Ga0307507_10013567
468 Ga0307507_10016424
469 Ga0307510_10001802
470 Ga0373959_0009233
471 Ga0373947_0070640
472 Ga0395901_0137028
473 Ga0439436_0003505
474 Ga0450903_001512
475 Ga0439446_0002446
476 Ga0439434_0003845
477 Ga0466969_0009727
478 Ga0466966_0001060
479 Ga0466966_0016233
480 Ga0466970_0003459
481 Ga0466970_0036926
482 Ga0466959_0002443
483 Ga0466967_0000934
484 Ga0495629_0007829
485 Ga0495651_0004157
486 Ga0495662_0002659
487 Ga0495664_0007575
488 Ga0495628_0030016
489 Ga0495630_0175124
490 Ga0495652_0021536
491 Ga0495640_0035056
492 Ga0495586_0049193
493 Ga0495587_0009939
494 Ga0495645_0074596
495 Ga0495657_0003462
496 Ga0495646_0001907
497 Ga0495658_0038532
498 Ga0495613_0002464
499 Ga0495671_0020715
500 Ga0495604_0001334
501 Ga0495676_0016392
502 Ga0495676_0063960
503 Ga0495687_002755
504 Ga0495681_0000564
505 Ga0495593_0004464
506 Ga0495614_0004239
507 Ga0495614_0006196
508 Ga0496101_0061466
509 Ga0496101_0105918
510 Ga0496102_0044180
511 Ga0496104_0143866
512 Ga0496105_0070564
513 Ga0496106_0146936
514 Ga0496106_0175668
515 Ga0496107_0017560
516 Ga0496108_0000096
517 Ga0496108_0033100
518 Ga0496108_0067456
519 Ga0496108_0080302
520 Ga0496109_0162438
521 Ga0496110_0008285
522 Ga0496110_0072926
523 Ga0496110_0148604
524 Ga0496111_0107243
525 Ga0496111_0115673
526 Ga0496112_0010791
527 Ga0496113_0037173
528 Ga0496114_0047531
529 Ga0501032_0007106
530 Ga0501034_0123899
531 Ga0501036_0027564
532 Ga0501036_0048746
533 Ga0501036_0056876
534 Ga0501037_0032904
535 Ga0501038_0003141
536 Ga0501038_0087265
537 Ga0501040_0033342
538 Ga0501042_0037571
539 Ga0501042_0066509
540 Ga0501043_0052578
541 Ga0501046_0006194
542 Ga0501046_0013550
543 Ga0501047_0033336
544 Ga0501048_0051286
545 Ga0501069_0010522
546 Ga0501070_0025541
547 Ga0501070_0054591
548 Ga0501070_0055398
549 Ga0501070_0164948
550 Ga0501071_0064281
551 Ga0501072_0044095
552 Ga0501074_0029735
553 Ga0501074_0031658
554 Ga0501075_0173031
555 Ga0501076_0010811
556 Ga0501077_0045442
557 Ga0501079_0083371
558 Ga0501080_0143858
559 Ga0501081_0118781
560 Ga0501044_0078519
561 Ga0501045_0082184
562 nmdc:mga05p37_103350_c1
563 nmdc:mga06r32_36666_c1
564 nmdc:mga08y16_243090_c1
565 Ga0500643_000105
566 Ga0500644_0036612
567 Ga0500646_0000366
568 Ga0500640_007489
569 Ga0500560_002576
570 Ga0500568_0001444
571 Ga0500600_0077648
572 Ga0501082_0009404
573 Ga0530510_0092609
574 2559426854
575 2586064015
576 2643891261
577 2643960309
578 2738870166
579 2753075991
580 2774391759
581 2776370436
582 2785344724
583 2785368183
584 2791916624
585 2809197445
586 2809586735
587 2812352342
588 2861523146
589 2862288489
590 2862295789
591 2863071724
592 2866555926
593 2866618613
594 2870729238
595 2877682398
596 2891970004
597 2899360349
598 2899372709
599 2915776101
600 2917740525
601 2954004083
602 2954387528
603 2954698373
604 2954703859
605 8003322225
606 8047720015
607 8048408812
608 8056210931

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18614

RNase_II_C_S1

RNase II-type exonuclease C-terminal S1 domain

503

560

0.96

PF00773

RNB

RNB domain

129

456

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1kl9-assembly1.cif.gz_A crystal structure of the n-terminal segment of human eukaryotic initiation factor 2alpha 0.8381 414 473
2vnu-assembly1.cif.gz_D crystal structure of sc rrp44 0.8176 16 459
7dcy-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.815 15 475
7did-assembly1.cif.gz_A mycoplasma genitalium rnase r in complex with ribose methylated single-stranded rna 0.8143 15 475
2a1a-assembly1.cif.gz_A pkr kinase domain-eif2alpha complex 0.8134 414 473
ID Description Score Start End Superfamily
2d9tA01 Mainly Beta;Roll;SH3 type barrels.; 0.866 420 444 2.30.30.140
af_P92186_48_133_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8228 415 461 2.40.50.140
2a1aA01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8134 414 473 2.40.50.140
af_Q94C69_1_75_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.7846 417 473 2.40.50.140
af_Q14690_713_802_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.7825 414 474 2.40.50.140
ID Description Score Start End GO Terms
AF-W2F4D6-F1-model_v4 RNase II-type exonuclease C-terminal S1 domain-containing protein 0.9845 406 475
AF-A0A3R9XH44-F1-model_v4 deleted 0.9818 14 169
AF-A0A4R7J5R5-F1-model_v4 RNB domain-containing protein 0.9814 1 474 GO:0000175
GO:0000932
GO:0003723
GO:0006402
AF-A0A1I2H428-F1-model_v4 Exoribonuclease R 0.9805 4 475 GO:0000175
GO:0000932
GO:0003723
GO:0006402
AF-A0A0X3WDJ4-F1-model_v4 Ribonuclease II 0.9796 1 475 GO:0000175
GO:0000932
GO:0003723
GO:0006402

Map