F397238

General Info

Members Datasets Scaffolds Average Seq Length
303 181 606 640

Family's Representative Sequence

Representative Sequence 3300048905|Ga0496102_0000053|Ga0496102_0000053_19895_21919
Length 674
Sequence MFEGAAGSLQAMSITVTLPDGKALALDDGATGADAAMAIGPGLARAALAIEVSHPEVEQPAEVQDLARPLPDGAHVAILTAKSGDPSLALIRHDAAHVLASAVMELWPEVKISIGPAIENGFYYDFQFPEGVSISQEDFPQIEARMAGHVKAAESFHREDVSPAVARERFVAERQDYKVELIDDLVSAAPAEAPLQSVSLYTNGPFTDLCRGPHAPTTKTVGAFKLQSVAGAYWRGDANRTMLTRIYGTAFHTKAQLQEHLERLEQAALRDHRKLGRELGLFHFSDVSPGAAFWLPAGTGMYNQLVSLSREMGSERGYTEVKTPLIYDAELWKTSGHWGKYRENMFTVQVEEREMGVKPMNCPGHAHLFKSSRHSYRDLPVRYSEPGLLHRNEASGVLHGLLRVRHFAQDDAHIFCAEEEIQDEVAGCLEFAFATYKLFDFDVRLELSTRPEQRVGDDELWDRAEQALTNALDSQKLDYELNPGDGAFYGPKIDMHMTDSLGRSWQLGTVQLDYNMPERFDLTYTGADNTDHRPVMIHRALFGSYERFIGIMIEHYAGELPLWLAPVQAIVLPISDRLNDYASSVKERLRGAGVRVELDDRGESVGRKIREAELRKIPHMLIVGDREASEGTVSLREHRSGDVGSVSLEEVLRLYSAALTTRTNPPHAQLSLDA

Samples

Sample ID Description Type Environment
1 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
54 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
55 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
56 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
88 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
89 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
90 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
91 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
92 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
97 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
112 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
113 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
114 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
115 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
116 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
117 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
118 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
119 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
120 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
121 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
122 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
123 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
128 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
129 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
130 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
131 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
132 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
133 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
134 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
137 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
145 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
146 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
147 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
148 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
169 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
170 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
171 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
172 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
175 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
176 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
177 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
178 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
179 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
180 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
181 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.99
Nodule 0
Rhizoplane 9.24
Rhizosphere 85.15
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496102_0000053 3300048905 Bacteria 176385
2 LJQas_1001209 3300000549 Bacteria 3899
3 JGI25406J46586_10001725 3300003203 Bacteria 10278
4 Ga0070683_100066169 3300005329 Bacteria 3366
5 Ga0070683_100107576 3300005329 Bacteria 2629
6 Ga0068868_100029975 3300005338 Bacteria 4170
7 Ga0070660_100013556 3300005339 Bacteria 5851
8 Ga0070660_100041346 3300005339 Bacteria 3513
9 Ga0070661_100009027 3300005344 Bacteria 6897
10 Ga0070668_100037132 3300005347 Bacteria 3719
11 Ga0070659_100000013 3300005366 Bacteria 178795
12 Ga0070659_100052271 3300005366 Bacteria 3213
13 Ga0070667_100085494 3300005367 Bacteria 2705
14 Ga0070714_100000473 3300005435 Bacteria 29149
15 Ga0070714_100020587 3300005435 Bacteria 5390
16 Ga0070714_100029617 3300005435 Bacteria 4551
17 Ga0070713_100012278 3300005436 Bacteria 6276
18 Ga0070710_10000015 3300005437 Bacteria 103891
19 Ga0070711_100000866 3300005439 Bacteria 15917
20 Ga0070700_100001368 3300005441 Bacteria 12107
21 Ga0070663_100035918 3300005455 Bacteria 3441
22 Ga0070662_100018265 3300005457 Bacteria 4742
23 Ga0070685_10033168 3300005466 Bacteria 2898
24 Ga0070684_100002236 3300005535 Bacteria 14251
25 Ga0070684_100032351 3300005535 Bacteria 4457
26 Ga0070684_100058462 3300005535 Bacteria 3370
27 Ga0070686_100085900 3300005544 Bacteria 2094
28 Ga0070665_100002624 3300005548 Bacteria 19601
29 Ga0070665_100086954 3300005548 Bacteria 3131
30 Ga0070664_100019046 3300005564 Bacteria 5644
31 Ga0070664_100040654 3300005564 Bacteria 3921
32 Ga0068856_100020089 3300005614 Bacteria 6486
33 Ga0068856_100055743 3300005614 Bacteria 3900
34 Ga0068856_100113187 3300005614 Bacteria 2712
35 Ga0070702_100001778 3300005615 Bacteria 8955
36 Ga0070702_100002882 3300005615 Bacteria 7558
37 Ga0068861_100027244 3300005719 Bacteria 4161
38 Ga0068858_100054144 3300005842 Bacteria 3710
39 Ga0081455_10022022 3300005937 Bacteria 5966
40 Ga0081455_10025972 3300005937 Bacteria 5396
41 Ga0081538_10000470 3300005981 Bacteria 45253
42 Ga0081538_10006129 3300005981 Bacteria 10670
43 Ga0081538_10006866 3300005981 Bacteria 9912
44 Ga0081540_1016676 3300005983 Bacteria 4583
45 Ga0081539_10005851 3300005985 Bacteria 12197
46 Ga0081539_10006686 3300005985 Bacteria 10893
47 Ga0081539_10010729 3300005985 Bacteria 7384
48 Ga0070717_10000004 3300006028 Bacteria 365525
49 Ga0070717_10076205 3300006028 Bacteria 2806
50 Ga0075364_10022172 3300006051 Bacteria 4008
51 Ga0070712_100000002 3300006175 Bacteria 288475
52 Ga0070712_100001468 3300006175 Bacteria 14378
53 Ga0075430_100003230 3300006846 Bacteria 13656
54 Ga0075430_100009402 3300006846 Bacteria 8262
55 Ga0075430_100085443 3300006846 Bacteria 2642
56 Ga0075431_100004070 3300006847 Bacteria 14258
57 Ga0075433_10028130 3300006852 Bacteria 4777
58 Ga0075429_100005975 3300006880 Bacteria 10520
59 Ga0068865_100009795 3300006881 Bacteria 5950
60 Ga0105240_10006859 3300009093 Bacteria 16645
61 Ga0105240_10018597 3300009093 Bacteria 9320
62 Ga0111539_10006582 3300009094 Bacteria 14971
63 Ga0111539_10015757 3300009094 Bacteria 9392
64 Ga0111539_10026633 3300009094 Bacteria 7068
65 Ga0105245_10003603 3300009098 Bacteria 13818
66 Ga0105245_10036043 3300009098 Bacteria 4392
67 Ga0114129_10024822 3300009147 Bacteria 8497
68 Ga0114129_10026595 3300009147 Bacteria 8194
69 Ga0114129_10050322 3300009147 Bacteria 5853
70 Ga0114129_10126647 3300009147 Bacteria 3511
71 Ga0114129_10128409 3300009147 Bacteria 3484
72 Ga0105243_10004607 3300009148 Bacteria 10871
73 Ga0105243_10073253 3300009148 Bacteria 2775
74 Ga0105248_10021238 3300009177 Bacteria 7193
75 Ga0105248_10189004 3300009177 Bacteria 2320
76 Ga0105249_10088106 3300009553 Bacteria 2898
77 Ga0105239_10052679 3300010375 Bacteria 4463
78 Ga0105239_10062835 3300010375 Bacteria 4076
79 Ga0105239_10094999 3300010375 Bacteria 3293
80 Ga0105246_10028152 3300011119 Bacteria 3690
81 Ga0157374_10010601 3300013296 Bacteria 7934
82 Ga0157372_10051510 3300013307 Bacteria 4582
83 Ga0157375_10008172 3300013308 Bacteria 9160
84 Ga0157375_10023434 3300013308 Bacteria 5696
85 Ga0163163_10121440 3300014325 Bacteria 2647
86 Ga0157380_10083141 3300014326 Bacteria 2622
87 Ga0157377_10001700 3300014745 Bacteria 9597
88 Ga0157377_10014214 3300014745 Bacteria 4046
89 Ga0213874_10004640 3300021377 Bacteria 3155
90 Ga0213875_10002664 3300021388 Bacteria 10538
91 Ga0207692_10000013 3300025898 Bacteria 103819
92 Ga0207692_10023386 3300025898 Bacteria 2857
93 Ga0207705_10037073 3300025909 Bacteria 3489
94 Ga0207695_10001657 3300025913 Bacteria 35883
95 Ga0207695_10001827 3300025913 Bacteria 33465
96 Ga0207671_10000406 3300025914 Bacteria 60268
97 Ga0207693_10000027 3300025915 Bacteria 120643
98 Ga0207693_10002447 3300025915 Bacteria 16123
99 Ga0207663_10000472 3300025916 Bacteria 17438
100 Ga0207662_10033193 3300025918 Bacteria 3007
101 Ga0207657_10004161 3300025919 Bacteria 15335
102 Ga0207657_10008650 3300025919 Bacteria 10305
103 Ga0207657_10029479 3300025919 Bacteria 4994
104 Ga0207659_10009916 3300025926 Bacteria 5961
105 Ga0207687_10075013 3300025927 Bacteria 2426
106 Ga0207664_10000006 3300025929 Bacteria 408702
107 Ga0207664_10017396 3300025929 Bacteria 5268
108 Ga0207664_10073044 3300025929 Bacteria 2767
109 Ga0207664_10102418 3300025929 Bacteria 2367
110 Ga0207690_10000075 3300025932 Bacteria 85885
111 Ga0207690_10033878 3300025932 Bacteria 3287
112 Ga0207690_10052523 3300025932 Bacteria 2730
113 Ga0207706_10016812 3300025933 Bacteria 6603
114 Ga0207709_10057147 3300025935 Bacteria 2418
115 Ga0207670_10052635 3300025936 Bacteria 2738
116 Ga0207669_10014592 3300025937 Bacteria 3942
117 Ga0207665_10015701 3300025939 Bacteria 4971
118 Ga0207689_10017936 3300025942 Bacteria 5978
119 Ga0207661_10019967 3300025944 Bacteria 5002
120 Ga0207640_10054164 3300025981 Bacteria 2622
121 Ga0207658_10065699 3300025986 Bacteria 2726
122 Ga0207677_10037692 3300026023 Bacteria 3162
123 Ga0207703_10030825 3300026035 Bacteria 4239
124 Ga0207678_10009429 3300026067 Bacteria 8586
125 Ga0207708_10000872 3300026075 Bacteria 22695
126 Ga0207708_10008572 3300026075 Bacteria 7565
127 Ga0207702_10053314 3300026078 Bacteria 3423
128 Ga0207648_10010214 3300026089 Bacteria 8930
129 Ga0207648_10036305 3300026089 Bacteria 4341
130 Ga0207675_100042681 3300026118 Bacteria 4234
131 Ga0207683_10025234 3300026121 Bacteria 5125
132 Ga0268266_10004604 3300028379 Bacteria 13163
133 Ga0268264_10086986 3300028381 Bacteria 2686
134 Ga0265337_1008027 3300028556 Bacteria 3882
135 Ga0265326_10000023 3300028558 Bacteria 113142
136 Ga0265326_10001392 3300028558 Bacteria 8510
137 Ga0265319_1000147 3300028563 Bacteria 52278
138 Ga0265319_1000399 3300028563 Bacteria 31553
139 Ga0265319_1001566 3300028563 Bacteria 13424
140 Ga0265334_10000094 3300028573 Bacteria 63340
141 Ga0265318_10007028 3300028577 Bacteria 5128
142 Ga0265336_10000004 3300028666 Bacteria 418303
143 Ga0265336_10000681 3300028666 Bacteria 18339
144 Ga0265338_10000012 3300028800 Bacteria 418599
145 Ga0265324_10001004 3300029957 Bacteria 17316
146 Ga0265324_10002660 3300029957 Bacteria 8923
147 Ga0265320_10026330 3300031240 Bacteria 3046
148 Ga0265340_10000001 3300031247 Bacteria 1647668
149 Ga0265339_10016939 3300031249 Bacteria 4329
150 Ga0265327_10022369 3300031251 Bacteria 3783
151 Ga0307413_10004844 3300031824 Bacteria 5915
152 Ga0307413_10016338 3300031824 Bacteria 3831
153 Ga0307413_10038074 3300031824 Bacteria 2784
154 Ga0307406_10032254 3300031901 Bacteria 3197
155 Ga0307409_100011396 3300031995 Bacteria 5603
156 Ga0307409_100030334 3300031995 Bacteria 3883
157 Ga0307409_100096028 3300031995 Bacteria 2444
158 Ga0307409_100102587 3300031995 Bacteria 2377
159 Ga0307416_100021289 3300032002 Bacteria 4651
160 Ga0307416_100066206 3300032002 Bacteria 2974
161 Ga0307411_10006270 3300032005 Bacteria 5935
162 Ga0307415_100004686 3300032126 Bacteria 7150
163 Ga0307415_100014932 3300032126 Bacteria 4583
164 Ga0307415_100075781 3300032126 Bacteria 2382
165 Ga0307415_100093198 3300032126 Bacteria 2186
166 Ga0395900_0008406 3300037418 Bacteria 10621
167 Ga0395898_0000631 3300037466 Bacteria 64382
168 Ga0395898_0010935 3300037466 Bacteria 9464
169 Ga0395898_0085462 3300037466 Bacteria 3041
170 Ga0395905_0000617 3300037471 Bacteria 47661
171 Ga0395905_0000930 3300037471 Bacteria 37805
172 Ga0395905_0005586 3300037471 Bacteria 12810
173 Ga0395905_0006925 3300037471 Bacteria 11333
174 Ga0436364_0507893 3300037853 Bacteria 50699
175 Ga0436364_0539810 3300037853 Bacteria 7941
176 Ga0436364_0737248 3300037853 Bacteria 154680
177 Ga0436364_1153074 3300037853 Bacteria 3176
178 Ga0436364_1400800 3300037853 Bacteria 5456
179 Ga0395901_0002528 3300038443 Bacteria 18538
180 Ga0395901_0007317 3300038443 Bacteria 11145
181 Ga0436365_0815456 3300039437 Bacteria 2811
182 Ga0436365_1007862 3300039437 Bacteria 3402
183 Ga0436365_1413912 3300039437 Bacteria 8761
184 Ga0436365_1865154 3300039437 Bacteria 2694
185 Ga0436363_0565725 3300039450 Bacteria 8125
186 Ga0436363_0905335 3300039450 Bacteria 2470
187 Ga0436362_0470322 3300039453 Bacteria 3262
188 Ga0453683_0001054 3300044673 Bacteria 25626
189 Ga0466965_0040070 3300044683 Bacteria 2305
190 Ga0466961_0024121 3300044693 Bacteria 3913
191 Ga0466963_0001578 3300044694 Bacteria 12367
192 Ga0466963_0004310 3300044694 Bacteria 8253
193 Ga0466963_0018094 3300044694 Bacteria 4399
194 Ga0466963_0065863 3300044694 Bacteria 2429
195 Ga0466971_0013557 3300044719 Bacteria 3582
196 Ga0466968_0028713 3300044735 Bacteria 2296
197 Ga0466970_0023504 3300044765 Bacteria 3220
198 Ga0466957_0001158 3300044842 Bacteria 13648
199 Ga0466960_0019816 3300044901 Bacteria 2970
200 Ga0466960_0020211 3300044901 Bacteria 2946
201 Ga0466959_0006902 3300045049 Bacteria 7927
202 Ga0466959_0007719 3300045049 Bacteria 7559
203 Ga0466959_0049041 3300045049 Bacteria 3102
204 Ga0466959_0056141 3300045049 Bacteria 2874
205 Ga0466959_0062029 3300045049 Bacteria 2718
206 Ga0466958_0021044 3300045836 Bacteria 3808
207 Ga0466958_0025328 3300045836 Bacteria 3497
208 Ga0466958_0058965 3300045836 Bacteria 2334
209 Ga0466967_0012885 3300045976 Bacteria 6427
210 Ga0466967_0017021 3300045976 Bacteria 5753
211 Ga0466967_0070337 3300045976 Bacteria 3131
212 Ga0466967_0097751 3300045976 Bacteria 2680
213 Ga0466967_0142595 3300045976 Bacteria 2233
214 Ga0466967_0169628 3300045976 Bacteria 2053
215 Ga0495592_0034854 3300046454 Bacteria 3793
216 Ga0495664_0000011 3300046477 Bacteria 253351
217 Ga0495608_0001233 3300046511 Bacteria 18148
218 Ga0495618_0038576 3300046514 Bacteria 3003
219 Ga0495645_0000023 3300046543 Bacteria 130982
220 Ga0495645_0000181 3300046543 Bacteria 44474
221 Ga0495667_0001369 3300046559 Bacteria 16028
222 Ga0495667_0010165 3300046559 Bacteria 6370
223 Ga0495657_0000213 3300046675 Bacteria 52360
224 Ga0495657_0015819 3300046675 Bacteria 5510
225 Ga0495623_0030385 3300046679 Bacteria 3475
226 Ga0495600_0026771 3300046809 Bacteria 3724
227 Ga0495604_0001458 3300047317 Bacteria 19434
228 Ga0495674_0114247 3300047319 Bacteria 2286
229 Ga0495684_0007722 3300047471 Bacteria 8328
230 Ga0496103_0000411 3300048906 Bacteria 37997
231 Ga0496104_0000036 3300048907 Bacteria 180472
232 Ga0496104_0002985 3300048907 Bacteria 14585
233 Ga0496104_0016291 3300048907 Bacteria 6748
234 Ga0496104_0033627 3300048907 Bacteria 4778
235 Ga0496105_0003539 3300048908 Bacteria 11584
236 Ga0496106_0036648 3300048909 Bacteria 3668
237 Ga0496107_0006782 3300048910 Bacteria 7882
238 Ga0496107_0077822 3300048910 Bacteria 2416
239 Ga0496108_0027341 3300048911 Bacteria 4709
240 Ga0496108_0030896 3300048911 Bacteria 4439
241 Ga0496108_0037965 3300048911 Bacteria 4012
242 Ga0496108_0049398 3300048911 Bacteria 3518
243 Ga0496109_0000823 3300048912 Bacteria 25875
244 Ga0496109_0026709 3300048912 Bacteria 5150
245 Ga0496109_0035271 3300048912 Bacteria 4511
246 Ga0496110_0000378 3300048913 Bacteria 29857
247 Ga0496110_0025899 3300048913 Bacteria 5015
248 Ga0496110_0046443 3300048913 Bacteria 3799
249 Ga0496110_0084322 3300048913 Bacteria 2836
250 Ga0496111_0000057 3300048914 Bacteria 45020
251 Ga0496112_0000446 3300048915 Bacteria 27486
252 Ga0496112_0036170 3300048915 Bacteria 4815
253 Ga0496112_0042153 3300048915 Bacteria 4465
254 Ga0496113_0018685 3300048916 Bacteria 4832
255 Ga0496115_0026314 3300048918 Bacteria 4540
256 Ga0496115_0035325 3300048918 Bacteria 3954
257 Ga0496121_0062443 3300048924 Bacteria 3051
258 Ga0501031_0046853 3300049568 Bacteria 2819
259 Ga0501031_0072199 3300049568 Bacteria 2247
260 Ga0501032_0002366 3300049569 Bacteria 14741
261 Ga0501033_0015213 3300049570 Bacteria 5838
262 Ga0501036_0062547 3300049572 Bacteria 3153
263 Ga0501037_0015123 3300049573 Bacteria 5676
264 Ga0501038_0031375 3300049574 Bacteria 4696
265 Ga0501039_0010102 3300049575 Bacteria 7189
266 Ga0501042_0013304 3300049578 Bacteria 5598
267 Ga0501043_0034092 3300049579 Bacteria 4004
268 Ga0501048_0003929 3300049582 Bacteria 11294
269 Ga0501070_0021641 3300049586 Bacteria 5392
270 Ga0501070_0043955 3300049586 Bacteria 3717
271 Ga0501070_0059044 3300049586 Bacteria 3179
272 Ga0501071_0034117 3300049587 Bacteria 3620
273 Ga0501076_0043536 3300049592 Bacteria 3538
274 Ga0501080_0093855 3300049742 Bacteria 2786
275 Ga0501081_0039426 3300049743 Bacteria 3232
276 Ga0501035_0012184 3300049822 Bacteria 7952
277 Ga0501044_0019139 3300049823 Bacteria 7329
278 Ga0501045_0030237 3300049824 Bacteria 3919
279 nmdc:mga05p37_1727_c1 3300050507 Bacteria 25494
280 nmdc:mga05p37_190139_c1 3300050507 Bacteria 2493
281 nmdc:mga05p37_217202_c1 3300050507 Bacteria 2309
282 nmdc:mga05p37_47301_c1 3300050507 Bacteria 5291
283 nmdc:mga05p37_61189_c1 3300050507 Bacteria 4635
284 nmdc:mga09592_14051_c1 3300050508 Bacteria 6538
285 nmdc:mga09592_18114_c1 3300050508 Bacteria 5775
286 nmdc:mga09592_22955_c1 3300050508 Bacteria 5148
287 nmdc:mga0qj67_58656_c1 3300050509 Bacteria 3052
288 nmdc:mga0qj67_71036_c1 3300050509 Bacteria 2778
289 nmdc:mga06r32_103140_c1 3300050510 Bacteria 2801
290 nmdc:mga06r32_5700_c1 3300050510 Bacteria 11215
291 nmdc:mga06r32_99212_c1 3300050510 Bacteria 2856
292 nmdc:mga08y16_15490_c1 3300050511 Bacteria 8018
293 nmdc:mga08y16_63325_c1 3300050511 Bacteria 3862
294 nmdc:mga0a205_39352_c1 3300050515 Bacteria 4551
295 Ga0495601_0046080 3300053077 Bacteria 2744
296 Ga0495612_0000057 3300053078 Bacteria 49938
297 Ga0495595_0020886 3300053084 Bacteria 2854
298 Ga0495619_0007049 3300053085 Bacteria 7113
299 Ga0500556_0000499 3300053104 Bacteria 27266
300 Ga0500616_0016649 3300053153 Bacteria 4180
301 Ga0501082_0062478 3300060353 Bacteria 3206
302 Ga0530510_0020855 3300061734 Bacteria 4661
303 Ga0530510_0047784 3300061734 Bacteria 3093
304 Ga0496102_0000053
305 LJQas_1001209
306 JGI25406J46586_10001725
307 Ga0070683_100066169
308 Ga0070683_100107576
309 Ga0068868_100029975
310 Ga0070660_100013556
311 Ga0070660_100041346
312 Ga0070661_100009027
313 Ga0070668_100037132
314 Ga0070659_100000013
315 Ga0070659_100052271
316 Ga0070667_100085494
317 Ga0070714_100000473
318 Ga0070714_100020587
319 Ga0070714_100029617
320 Ga0070713_100012278
321 Ga0070710_10000015
322 Ga0070711_100000866
323 Ga0070700_100001368
324 Ga0070663_100035918
325 Ga0070662_100018265
326 Ga0070685_10033168
327 Ga0070684_100002236
328 Ga0070684_100032351
329 Ga0070684_100058462
330 Ga0070686_100085900
331 Ga0070665_100002624
332 Ga0070665_100086954
333 Ga0070664_100019046
334 Ga0070664_100040654
335 Ga0068856_100020089
336 Ga0068856_100055743
337 Ga0068856_100113187
338 Ga0070702_100001778
339 Ga0070702_100002882
340 Ga0068861_100027244
341 Ga0068858_100054144
342 Ga0081455_10022022
343 Ga0081455_10025972
344 Ga0081538_10000470
345 Ga0081538_10006129
346 Ga0081538_10006866
347 Ga0081540_1016676
348 Ga0081539_10005851
349 Ga0081539_10006686
350 Ga0081539_10010729
351 Ga0070717_10000004
352 Ga0070717_10076205
353 Ga0075364_10022172
354 Ga0070712_100000002
355 Ga0070712_100001468
356 Ga0075430_100003230
357 Ga0075430_100009402
358 Ga0075430_100085443
359 Ga0075431_100004070
360 Ga0075433_10028130
361 Ga0075429_100005975
362 Ga0068865_100009795
363 Ga0105240_10006859
364 Ga0105240_10018597
365 Ga0111539_10006582
366 Ga0111539_10015757
367 Ga0111539_10026633
368 Ga0105245_10003603
369 Ga0105245_10036043
370 Ga0114129_10024822
371 Ga0114129_10026595
372 Ga0114129_10050322
373 Ga0114129_10126647
374 Ga0114129_10128409
375 Ga0105243_10004607
376 Ga0105243_10073253
377 Ga0105248_10021238
378 Ga0105248_10189004
379 Ga0105249_10088106
380 Ga0105239_10052679
381 Ga0105239_10062835
382 Ga0105239_10094999
383 Ga0105246_10028152
384 Ga0157374_10010601
385 Ga0157372_10051510
386 Ga0157375_10008172
387 Ga0157375_10023434
388 Ga0163163_10121440
389 Ga0157380_10083141
390 Ga0157377_10001700
391 Ga0157377_10014214
392 Ga0213874_10004640
393 Ga0213875_10002664
394 Ga0207692_10000013
395 Ga0207692_10023386
396 Ga0207705_10037073
397 Ga0207695_10001657
398 Ga0207695_10001827
399 Ga0207671_10000406
400 Ga0207693_10000027
401 Ga0207693_10002447
402 Ga0207663_10000472
403 Ga0207662_10033193
404 Ga0207657_10004161
405 Ga0207657_10008650
406 Ga0207657_10029479
407 Ga0207659_10009916
408 Ga0207687_10075013
409 Ga0207664_10000006
410 Ga0207664_10017396
411 Ga0207664_10073044
412 Ga0207664_10102418
413 Ga0207690_10000075
414 Ga0207690_10033878
415 Ga0207690_10052523
416 Ga0207706_10016812
417 Ga0207709_10057147
418 Ga0207670_10052635
419 Ga0207669_10014592
420 Ga0207665_10015701
421 Ga0207689_10017936
422 Ga0207661_10019967
423 Ga0207640_10054164
424 Ga0207658_10065699
425 Ga0207677_10037692
426 Ga0207703_10030825
427 Ga0207678_10009429
428 Ga0207708_10000872
429 Ga0207708_10008572
430 Ga0207702_10053314
431 Ga0207648_10010214
432 Ga0207648_10036305
433 Ga0207675_100042681
434 Ga0207683_10025234
435 Ga0268266_10004604
436 Ga0268264_10086986
437 Ga0265337_1008027
438 Ga0265326_10000023
439 Ga0265326_10001392
440 Ga0265319_1000147
441 Ga0265319_1000399
442 Ga0265319_1001566
443 Ga0265334_10000094
444 Ga0265318_10007028
445 Ga0265336_10000004
446 Ga0265336_10000681
447 Ga0265338_10000012
448 Ga0265324_10001004
449 Ga0265324_10002660
450 Ga0265320_10026330
451 Ga0265340_10000001
452 Ga0265339_10016939
453 Ga0265327_10022369
454 Ga0307413_10004844
455 Ga0307413_10016338
456 Ga0307413_10038074
457 Ga0307406_10032254
458 Ga0307409_100011396
459 Ga0307409_100030334
460 Ga0307409_100096028
461 Ga0307409_100102587
462 Ga0307416_100021289
463 Ga0307416_100066206
464 Ga0307411_10006270
465 Ga0307415_100004686
466 Ga0307415_100014932
467 Ga0307415_100075781
468 Ga0307415_100093198
469 Ga0395900_0008406
470 Ga0395898_0000631
471 Ga0395898_0010935
472 Ga0395898_0085462
473 Ga0395905_0000617
474 Ga0395905_0000930
475 Ga0395905_0005586
476 Ga0395905_0006925
477 Ga0436364_0507893
478 Ga0436364_0539810
479 Ga0436364_0737248
480 Ga0436364_1153074
481 Ga0436364_1400800
482 Ga0395901_0002528
483 Ga0395901_0007317
484 Ga0436365_0815456
485 Ga0436365_1007862
486 Ga0436365_1413912
487 Ga0436365_1865154
488 Ga0436363_0565725
489 Ga0436363_0905335
490 Ga0436362_0470322
491 Ga0453683_0001054
492 Ga0466965_0040070
493 Ga0466961_0024121
494 Ga0466963_0001578
495 Ga0466963_0004310
496 Ga0466963_0018094
497 Ga0466963_0065863
498 Ga0466971_0013557
499 Ga0466968_0028713
500 Ga0466970_0023504
501 Ga0466957_0001158
502 Ga0466960_0019816
503 Ga0466960_0020211
504 Ga0466959_0006902
505 Ga0466959_0007719
506 Ga0466959_0049041
507 Ga0466959_0056141
508 Ga0466959_0062029
509 Ga0466958_0021044
510 Ga0466958_0025328
511 Ga0466958_0058965
512 Ga0466967_0012885
513 Ga0466967_0017021
514 Ga0466967_0070337
515 Ga0466967_0097751
516 Ga0466967_0142595
517 Ga0466967_0169628
518 Ga0495592_0034854
519 Ga0495664_0000011
520 Ga0495608_0001233
521 Ga0495618_0038576
522 Ga0495645_0000023
523 Ga0495645_0000181
524 Ga0495667_0001369
525 Ga0495667_0010165
526 Ga0495657_0000213
527 Ga0495657_0015819
528 Ga0495623_0030385
529 Ga0495600_0026771
530 Ga0495604_0001458
531 Ga0495674_0114247
532 Ga0495684_0007722
533 Ga0496103_0000411
534 Ga0496104_0000036
535 Ga0496104_0002985
536 Ga0496104_0016291
537 Ga0496104_0033627
538 Ga0496105_0003539
539 Ga0496106_0036648
540 Ga0496107_0006782
541 Ga0496107_0077822
542 Ga0496108_0027341
543 Ga0496108_0030896
544 Ga0496108_0037965
545 Ga0496108_0049398
546 Ga0496109_0000823
547 Ga0496109_0026709
548 Ga0496109_0035271
549 Ga0496110_0000378
550 Ga0496110_0025899
551 Ga0496110_0046443
552 Ga0496110_0084322
553 Ga0496111_0000057
554 Ga0496112_0000446
555 Ga0496112_0036170
556 Ga0496112_0042153
557 Ga0496113_0018685
558 Ga0496115_0026314
559 Ga0496115_0035325
560 Ga0496121_0062443
561 Ga0501031_0046853
562 Ga0501031_0072199
563 Ga0501032_0002366
564 Ga0501033_0015213
565 Ga0501036_0062547
566 Ga0501037_0015123
567 Ga0501038_0031375
568 Ga0501039_0010102
569 Ga0501042_0013304
570 Ga0501043_0034092
571 Ga0501048_0003929
572 Ga0501070_0021641
573 Ga0501070_0043955
574 Ga0501070_0059044
575 Ga0501071_0034117
576 Ga0501076_0043536
577 Ga0501080_0093855
578 Ga0501081_0039426
579 Ga0501035_0012184
580 Ga0501044_0019139
581 Ga0501045_0030237
582 nmdc:mga05p37_1727_c1
583 nmdc:mga05p37_190139_c1
584 nmdc:mga05p37_217202_c1
585 nmdc:mga05p37_47301_c1
586 nmdc:mga05p37_61189_c1
587 nmdc:mga09592_14051_c1
588 nmdc:mga09592_18114_c1
589 nmdc:mga09592_22955_c1
590 nmdc:mga0qj67_58656_c1
591 nmdc:mga0qj67_71036_c1
592 nmdc:mga06r32_103140_c1
593 nmdc:mga06r32_5700_c1
594 nmdc:mga06r32_99212_c1
595 nmdc:mga08y16_15490_c1
596 nmdc:mga08y16_63325_c1
597 nmdc:mga0a205_39352_c1
598 Ga0495601_0046080
599 Ga0495612_0000057
600 Ga0495595_0020886
601 Ga0495619_0007049
602 Ga0500556_0000499
603 Ga0500616_0016649
604 Ga0501082_0062478
605 Ga0530510_0020855
606 Ga0530510_0047784

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02824

TGS

TGS domain

14

80

0.98

PF03129

HGTP_anticodon

Anticodon binding domain

568

656

0.98

PF07973

tRNA_SAD

Threonyl and Alanyl tRNA synthetase second additional domain

198

247

0.98

PF00587

tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

346

556

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hwr-assembly1.cif.gz_A crystal structure of e. coli threonyl-trna synthetase bound to a novel inhibitor 0.977 246 639
4hwt-assembly1.cif.gz_A crystal structure of human threonyl-trna synthetase bound to a novel inhibitor 0.9726 247 639
8h99-assembly1.cif.gz_B crystal structure of e. coli thrs catalytic domain mutant 0.9716 247 639
7qpr-assembly1.cif.gz_A structure of full length spot 0.9622 1 60
8h9c-assembly1.cif.gz_A-2 crystal structure of chemically modified e. coli thrs catalytic domain 4 0.9614 247 639
ID Description Score Start End Superfamily
af_K7LYN7_44_253_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9898 230 416 3.30.930.10
4hwoA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9858 534 639 3.40.50.800
af_Q5XI17_371_543_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9833 231 398 3.30.930.10
af_Q54J66_607_710_3.40.50.800 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9828 536 639 3.40.50.800
1qf6A05 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9815 543 639 3.40.50.800
ID Description Score Start End GO Terms
AF-A0A7Y4K3T3-F1-model_v4 threonine--tRNA ligase (EC 6.1.1.3) 0.9937 282 413 GO:0004829
GO:0005524
GO:0005829
GO:0006435
AF-A0A353JY74-F1-model_v4 Threonine--tRNA ligase (EC 6.1.1.3) 0.9912 257 639 GO:0004829
GO:0005524
GO:0005737
GO:0006435
GO:0016740
GO:0046872
AF-A0A0G0JGX7-F1-model_v4 threonine--tRNA ligase (EC 6.1.1.3) 0.9907 247 415 GO:0004829
GO:0005524
GO:0005737
GO:0006435
AF-A0A3D6A941-F1-model_v4 deleted 0.9906 521 639
AF-A0A101I816-F1-model_v4 threonine--tRNA ligase (EC 6.1.1.3) 0.9891 303 426 GO:0004829
GO:0005524
GO:0005737
GO:0006435

Map