F397075

General Info

Members Datasets Scaffolds Average Seq Length
303 165 606 321

Family's Representative Sequence

Representative Sequence 3300026023|Ga0207677_10342522|Ga0207677_103425221
Length 354
Sequence MVAGRVKYSGPRQHRTNSLPPKFQTHRLELPPDYAGRRLDQALAQLLPQYSRTRIQRWIEEGAVRINGLPARARDLVVGGESATVEARLPAETGVAAEKLPLDIVHQDAAVIVINKPPGLVVHPGAGNRAHTLQNALLAHDAKLKRVPRAGLVHRIDKDTSGLLVVARTLEAHTALVAELAAHEIEREYLAVCTGAMTGGGTVNEPIGRHRTQRTKMTVRSDGRAAVTHYRIEKRFRAHTLTRVRLETGRTHQIRVHLAHVKYPIVGDPVYGGRRRLPPGATPALIHALENFGRQALHAARLTFTHPKSGKRVSYEAPLPADLVGLLRCDQDLNTASPKLCLKLVHHLLLHFSS

Samples

Sample ID Description Type Environment
1 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
118 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
119 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
120 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
121 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
122 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
123 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
124 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
125 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
126 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
127 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
128 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
131 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
132 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
133 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
134 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
135 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
136 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
137 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
138 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
141 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
142 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
143 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
144 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
153 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
154 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.67
Metatranscriptomes 0
Isolates 0.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.65
Rhizosphere 95.38
Stem 0
Stem Tuber 0
Unclassified 0.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207677_10342522 3300026023 Bacteria 1249
2 Ga0070690_100002047 3300005330 Bacteria 10756
3 Ga0070670_100002859 3300005331 Bacteria 14280
4 Ga0070670_100016738 3300005331 Bacteria 6292
5 Ga0070670_100037019 3300005331 Bacteria 4198
6 Ga0070670_100043089 3300005331 Bacteria 3880
7 Ga0070670_100154082 3300005331 Bacteria 1990
8 Ga0070670_100460588 3300005331 Bacteria 1128
9 Ga0068869_100001945 3300005334 Bacteria 12398
10 Ga0068869_100071984 3300005334 Bacteria 2561
11 Ga0068869_100150086 3300005334 Bacteria 1807
12 Ga0070680_100101157 3300005336 Bacteria 2392
13 Ga0070680_100111434 3300005336 Bacteria 2278
14 Ga0070682_100073179 3300005337 Bacteria 2198
15 Ga0070682_100104518 3300005337 Bacteria 1876
16 Ga0070689_100002696 3300005340 Bacteria 11632
17 Ga0070661_100013405 3300005344 Bacteria 5754
18 Ga0070668_100001171 3300005347 Bacteria 18549
19 Ga0070668_100003427 3300005347 Bacteria 11711
20 Ga0070669_100053364 3300005353 Bacteria 2959
21 Ga0070669_100093788 3300005353 Bacteria 2255
22 Ga0070675_100001181 3300005354 Bacteria 18965
23 Ga0070675_100130728 3300005354 Bacteria 2139
24 Ga0070675_100202351 3300005354 Bacteria 1724
25 Ga0070675_100325861 3300005354 Bacteria 1357
26 Ga0070671_100130593 3300005355 Bacteria 2116
27 Ga0070674_100037421 3300005356 Bacteria 3263
28 Ga0070674_100070960 3300005356 Bacteria 2462
29 Ga0070673_100012559 3300005364 Bacteria 5819
30 Ga0070673_100044268 3300005364 Bacteria 3446
31 Ga0070688_100025863 3300005365 Bacteria 3480
32 Ga0070688_100128479 3300005365 Bacteria 1706
33 Ga0070667_100037461 3300005367 Bacteria 4066
34 Ga0070667_100208866 3300005367 Bacteria 1735
35 Ga0070709_10020648 3300005434 Bacteria 3825
36 Ga0070714_100003443 3300005435 Bacteria 11790
37 Ga0070714_100024430 3300005435 Bacteria 4977
38 Ga0070713_100073630 3300005436 Bacteria 2892
39 Ga0070713_100162114 3300005436 Bacteria 1997
40 Ga0070701_10004109 3300005438 Bacteria 5843
41 Ga0070711_100004071 3300005439 Bacteria 8595
42 Ga0070711_100199369 3300005439 Bacteria 1543
43 Ga0070705_100018762 3300005440 Bacteria 3631
44 Ga0070700_100067078 3300005441 Bacteria 2279
45 Ga0070694_100076201 3300005444 Bacteria 2321
46 Ga0070678_100090966 3300005456 Bacteria 2340
47 Ga0070662_100003755 3300005457 Bacteria 9504
48 Ga0070662_100152636 3300005457 Bacteria 1800
49 Ga0070681_10005180 3300005458 Bacteria 12583
50 Ga0070681_10134957 3300005458 Unclassified 2399
51 Ga0068867_100128759 3300005459 Bacteria 1965
52 Ga0070685_10081672 3300005466 Bacteria 1938
53 Ga0070698_100169155 3300005471 Bacteria 2127
54 Ga0070699_100088613 3300005518 Bacteria 2703
55 Ga0070679_100038007 3300005530 Bacteria 4784
56 Ga0070679_100094623 3300005530 Bacteria 2975
57 Ga0070684_100002503 3300005535 Bacteria 13539
58 Ga0070684_100062306 3300005535 Bacteria 3267
59 Ga0070672_100036500 3300005543 Bacteria 3745
60 Ga0070672_100048075 3300005543 Bacteria 3313
61 Ga0070672_100266133 3300005543 Bacteria 1447
62 Ga0070686_100007933 3300005544 Bacteria 5935
63 Ga0070686_100016499 3300005544 Bacteria 4298
64 Ga0070693_100017518 3300005547 Bacteria 3726
65 Ga0070665_100015484 3300005548 Bacteria 7662
66 Ga0070665_100020046 3300005548 Bacteria 6713
67 Ga0070665_100109813 3300005548 Bacteria 2760
68 Ga0070704_100045032 3300005549 Bacteria 3069
69 Ga0070664_100003243 3300005564 Bacteria 13145
70 Ga0070664_100008139 3300005564 Bacteria 8477
71 Ga0070664_100329427 3300005564 Bacteria 1385
72 Ga0068857_100012314 3300005577 Bacteria 7443
73 Ga0070702_100002349 3300005615 Bacteria 8132
74 Ga0070702_100071539 3300005615 Bacteria 2050
75 Ga0068859_100004100 3300005617 Bacteria 14861
76 Ga0068859_100031242 3300005617 Bacteria 5346
77 Ga0068864_100004576 3300005618 Bacteria 11357
78 Ga0068864_100008700 3300005618 Bacteria 8376
79 Ga0068864_100198757 3300005618 Bacteria 1841
80 Ga0068861_100009435 3300005719 Bacteria 6736
81 Ga0068861_100048246 3300005719 Bacteria 3218
82 Ga0068861_100055386 3300005719 Bacteria 3023
83 Ga0068861_100081290 3300005719 Bacteria 2537
84 Ga0068870_10081727 3300005840 Bacteria 1788
85 Ga0068863_100011987 3300005841 Bacteria 8378
86 Ga0068863_100019338 3300005841 Bacteria 6514
87 Ga0068863_100027137 3300005841 Bacteria 5462
88 Ga0068863_100033179 3300005841 Bacteria 4918
89 Ga0068858_100006053 3300005842 Bacteria 11790
90 Ga0068860_100046303 3300005843 Bacteria 4147
91 Ga0068860_100074980 3300005843 Bacteria 3218
92 Ga0068860_100138289 3300005843 Bacteria 2340
93 Ga0068860_100234470 3300005843 Bacteria 1784
94 Ga0068862_100001983 3300005844 Bacteria 18568
95 Ga0068862_100094024 3300005844 Bacteria 2614
96 Ga0068862_100130664 3300005844 Bacteria 2221
97 Ga0068862_100144866 3300005844 Bacteria 2111
98 Ga0068871_100176433 3300006358 Bacteria 1834
99 Ga0068871_100177421 3300006358 Bacteria 1829
100 Ga0068871_100206091 3300006358 Bacteria 1699
101 Ga0068871_100235526 3300006358 Bacteria 1590
102 Ga0075428_100010511 3300006844 Bacteria 10285
103 Ga0075428_100020542 3300006844 Bacteria 7312
104 Ga0075430_100001101 3300006846 Bacteria 21485
105 Ga0075430_100306382 3300006846 Bacteria 1314
106 Ga0075431_100000101 3300006847 Bacteria 53683
107 Ga0075431_100014749 3300006847 Bacteria 7912
108 Ga0075431_100018092 3300006847 Bacteria 7167
109 Ga0075431_100152550 3300006847 Bacteria 2379
110 Ga0075429_100005444 3300006880 Bacteria 10966
111 Ga0075429_100005700 3300006880 Bacteria 10743
112 Ga0075429_100201130 3300006880 Bacteria 1745
113 Ga0068865_100027245 3300006881 Bacteria 3773
114 Ga0068865_100112046 3300006881 Bacteria 2014
115 Ga0097620_100004100 3300006931 Bacteria 14861
116 Ga0097620_100031242 3300006931 Bacteria 5346
117 Ga0111539_10015223 3300009094 Bacteria 9584
118 Ga0111539_10026865 3300009094 Bacteria 7032
119 Ga0111539_10064992 3300009094 Bacteria 4314
120 Ga0114129_10000264 3300009147 Bacteria 59324
121 Ga0114129_10160484 3300009147 Bacteria 3071
122 Ga0105243_10092509 3300009148 Bacteria 2493
123 Ga0105243_10273117 3300009148 Bacteria 1519
124 Ga0105241_10055720 3300009174 Bacteria 3029
125 Ga0105242_10090772 3300009176 Bacteria 2570
126 Ga0105242_10276776 3300009176 Bacteria 1522
127 Ga0105248_10012994 3300009177 Bacteria 9176
128 Ga0105238_10295668 3300009551 Bacteria 1602
129 Ga0105249_10033958 3300009553 Bacteria 4620
130 Ga0105239_10708828 3300010375 Bacteria 1151
131 Ga0105246_10042777 3300011119 Bacteria 3069
132 Ga0157374_10267922 3300013296 Bacteria 1684
133 Ga0157378_10022889 3300013297 Bacteria 5500
134 Ga0157378_10072849 3300013297 Bacteria 3087
135 Ga0163162_10206597 3300013306 Bacteria 2093
136 Ga0157375_10022565 3300013308 Bacteria 5794
137 Ga0157375_10828049 3300013308 Bacteria 1073
138 Ga0163163_10009788 3300014325 Bacteria 8588
139 Ga0163163_10026594 3300014325 Bacteria 5534
140 Ga0163163_10034625 3300014325 Bacteria 4893
141 Ga0163163_10146365 3300014325 Bacteria 2406
142 Ga0163163_10225885 3300014325 Bacteria 1921
143 Ga0157380_10001671 3300014326 Bacteria 14638
144 Ga0157380_10018289 3300014326 Bacteria 5201
145 Ga0157380_10049825 3300014326 Bacteria 3305
146 Ga0157380_10200512 3300014326 Bacteria 1770
147 Ga0157377_10028625 3300014745 Bacteria 3000
148 Ga0157379_10265157 3300014968 Bacteria 1561
149 Ga0157379_10379941 3300014968 Bacteria 1296
150 Ga0157376_10072253 3300014969 Bacteria 2935
151 Ga0157376_10142253 3300014969 Bacteria 2153
152 Ga0157376_10312714 3300014969 Bacteria 1491
153 Ga0163161_10023319 3300017792 Bacteria 4365
154 Ga0163161_10074915 3300017792 Bacteria 2483
155 Ga0163161_10289975 3300017792 Bacteria 1286
156 Ga0207697_10034286 3300025315 Bacteria 2078
157 Ga0207688_10062377 3300025901 Bacteria 2101
158 Ga0207643_10081040 3300025908 Bacteria 1881
159 Ga0207695_10076721 3300025913 Bacteria 3396
160 Ga0207693_10008931 3300025915 Bacteria 8180
161 Ga0207663_10225682 3300025916 Bacteria 1365
162 Ga0207660_10069768 3300025917 Bacteria 2553
163 Ga0207660_10095880 3300025917 Bacteria 2207
164 Ga0207649_10089094 3300025920 Bacteria 2016
165 Ga0207681_10022044 3300025923 Bacteria 4058
166 Ga0207650_10001275 3300025925 Bacteria 18267
167 Ga0207650_10009101 3300025925 Bacteria 6787
168 Ga0207659_10000537 3300025926 Bacteria 22637
169 Ga0207659_10034288 3300025926 Bacteria 3499
170 Ga0207659_10059451 3300025926 Bacteria 2748
171 Ga0207659_10279446 3300025926 Bacteria 1364
172 Ga0207687_10408597 3300025927 Bacteria 1118
173 Ga0207700_10165033 3300025928 Bacteria 1842
174 Ga0207700_10497756 3300025928 Bacteria 1078
175 Ga0207664_10003858 3300025929 Bacteria 10073
176 Ga0207664_10023274 3300025929 Bacteria 4639
177 Ga0207644_10074949 3300025931 Bacteria 2485
178 Ga0207706_10063404 3300025933 Bacteria 3254
179 Ga0207709_10045392 3300025935 Bacteria 2661
180 Ga0207670_10088378 3300025936 Bacteria 2185
181 Ga0207669_10054014 3300025937 Bacteria 2424
182 Ga0207704_10028358 3300025938 Bacteria 3105
183 Ga0207704_10144845 3300025938 Bacteria 1667
184 Ga0207691_10006502 3300025940 Bacteria 11284
185 Ga0207691_10011369 3300025940 Bacteria 8544
186 Ga0207691_10030311 3300025940 Bacteria 5056
187 Ga0207691_10144309 3300025940 Bacteria 2096
188 Ga0207711_10017151 3300025941 Bacteria 6015
189 Ga0207689_10006657 3300025942 Bacteria 10191
190 Ga0207689_10032377 3300025942 Bacteria 4350
191 Ga0207689_10039985 3300025942 Bacteria 3882
192 Ga0207689_10118056 3300025942 Bacteria 2181
193 Ga0207679_10006564 3300025945 Bacteria 7354
194 Ga0207679_10301450 3300025945 Bacteria 1381
195 Ga0207679_10554443 3300025945 Bacteria 1031
196 Ga0207651_10003233 3300025960 Bacteria 7974
197 Ga0207651_10004708 3300025960 Bacteria 6928
198 Ga0207651_10025868 3300025960 Bacteria 3655
199 Ga0207712_10026057 3300025961 Bacteria 3892
200 Ga0207668_10001239 3300025972 Bacteria 15203
201 Ga0207668_10012990 3300025972 Bacteria 5117
202 Ga0207658_10000245 3300025986 Bacteria 56695
203 Ga0207658_10084761 3300025986 Bacteria 2439
204 Ga0207703_10073412 3300026035 Bacteria 2830
205 Ga0207708_10065784 3300026075 Bacteria 2771
206 Ga0207641_10005922 3300026088 Bacteria 10367
207 Ga0207641_10046568 3300026088 Bacteria 3655
208 Ga0207641_10049535 3300026088 Bacteria 3550
209 Ga0207641_10067520 3300026088 Bacteria 3063
210 Ga0207641_10174264 3300026088 Bacteria 1966
211 Ga0207648_10023133 3300026089 Bacteria 5573
212 Ga0207648_10080547 3300026089 Bacteria 2840
213 Ga0207648_10187954 3300026089 Bacteria 1830
214 Ga0207648_10261371 3300026089 Bacteria 1544
215 Ga0207676_10004282 3300026095 Bacteria 10091
216 Ga0207676_10013561 3300026095 Bacteria 5850
217 Ga0207676_10023473 3300026095 Bacteria 4551
218 Ga0207676_10067279 3300026095 Bacteria 2861
219 Ga0207676_10091554 3300026095 Bacteria 2499
220 Ga0207674_10022682 3300026116 Bacteria 6738
221 Ga0207675_100000731 3300026118 Bacteria 32584
222 Ga0207675_100002434 3300026118 Bacteria 18439
223 Ga0207675_100015088 3300026118 Bacteria 7208
224 Ga0207675_100038264 3300026118 Bacteria 4476
225 Ga0207675_100049605 3300026118 Bacteria 3917
226 Ga0207675_100099271 3300026118 Bacteria 2742
227 Ga0207683_10120353 3300026121 Bacteria 2356
228 Ga0207683_10140239 3300026121 Bacteria 2178
229 Ga0207428_10006308 3300027907 Bacteria 10962
230 Ga0207428_10026811 3300027907 Bacteria 4802
231 Ga0268266_10087360 3300028379 Bacteria 2728
232 Ga0268265_10002553 3300028380 Bacteria 13626
233 Ga0268265_10007614 3300028380 Bacteria 7305
234 Ga0268265_10092396 3300028380 Bacteria 2422
235 Ga0268265_10335924 3300028380 Bacteria 1374
236 Ga0268264_10038801 3300028381 Bacteria 3932
237 Ga0268264_10395463 3300028381 Bacteria 1327
238 Ga0265334_10007064 3300028573 Bacteria 4819
239 Ga0265334_10018235 3300028573 Bacteria 2895
240 Ga0307515_10165294 3300028794 Bacteria 2234
241 Ga0265338_10012444 3300028800 Bacteria 9699
242 Ga0265327_10000002 3300031251 Bacteria 856593
243 Ga0307513_10017649 3300031456 Bacteria 8551
244 Ga0307513_10018412 3300031456 Bacteria 8344
245 Ga0307513_10053707 3300031456 Bacteria 4328
246 Ga0307513_10154396 3300031456 Bacteria 2198
247 Ga0307509_10057888 3300031507 Bacteria 4106
248 Ga0307408_100053665 3300031548 Bacteria 2912
249 Ga0307408_100138496 3300031548 Bacteria 1907
250 Ga0265313_10000102 3300031595 Bacteria 86997
251 Ga0265313_10022654 3300031595 Bacteria 3402
252 Ga0307516_10002023 3300031730 Bacteria 27657
253 Ga0307410_10089591 3300031852 Bacteria 2180
254 Ga0307410_10179538 3300031852 Bacteria 1602
255 Ga0307412_10138654 3300031911 Bacteria 1778
256 Ga0307409_100055549 3300031995 Bacteria 3058
257 Ga0307409_100122491 3300031995 Bacteria 2205
258 Ga0307416_100256122 3300032002 Bacteria 1707
259 Ga0307414_10052913 3300032004 Bacteria 2829
260 Ga0307415_100074337 3300032126 Bacteria 2402
261 Ga0307415_100170848 3300032126 Bacteria 1695
262 Ga0373936_0009682 3300035113 Bacteria 3632
263 Ga0373956_0034549 3300035119 Bacteria 2227
264 Ga0373927_0000001 3300035695 Bacteria 1082160
265 Ga0373937_0033671 3300036401 Bacteria 4656
266 Ga0400487_52682 3300039110 Bacteria 1064
267 Ga0451807_0567844 3300041486 Bacteria 4681
268 Ga0451807_1669249 3300041486 Bacteria 2201
269 Ga0439449_0009795 3300042007 Bacteria 3627
270 Ga0451576_0141502 3300045051 Bacteria 2508
271 Ga0466958_0045531 3300045836 Bacteria 2647
272 Ga0495590_0009997 3300046457 Bacteria 3584
273 Ga0495638_0000843 3300046460 Bacteria 32065
274 Ga0495638_0007803 3300046460 Bacteria 7642
275 Ga0495638_0034326 3300046460 Bacteria 3239
276 Ga0495616_0005517 3300046513 Bacteria 7773
277 Ga0495630_0039877 3300046517 Bacteria 3510
278 Ga0495668_0054927 3300046616 Bacteria 2200
279 Ga0495625_0065543 3300046660 Bacteria 2560
280 Ga0495625_0077653 3300046660 Bacteria 2319
281 Ga0496102_0055316 3300048905 Bacteria 3619
282 Ga0496110_0070015 3300048913 Bacteria 3107
283 Ga0496114_0031997 3300048917 Bacteria 4328
284 Ga0501034_0001434 3300049571 Bacteria 31756
285 Ga0501042_0062919 3300049578 Bacteria 2652
286 Ga0501068_0064436 3300049584 Bacteria 2230
287 Ga0501070_0018749 3300049586 Bacteria 5805
288 Ga0501070_0108276 3300049586 Bacteria 2296
289 Ga0501072_0138485 3300049588 Bacteria 1941
290 Ga0501073_0047169 3300049589 Bacteria 3028
291 Ga0501077_0079084 3300049593 Bacteria 2083
292 Ga0501080_0008336 3300049742 Bacteria 9385
293 Ga0501083_0077299 3300049744 Bacteria 2209
294 nmdc:mga05p37_12969_c1 3300050507 Bacteria 9972
295 nmdc:mga05p37_5259_c1 3300050507 Bacteria 15191
296 nmdc:mga09592_37021_c1 3300050508 Bacteria 4090
297 nmdc:mga0qj67_12711_c1 3300050509 Bacteria 6350
298 nmdc:mga06r32_655_c1 3300050510 Bacteria 29828
299 nmdc:mga06r32_8_c1 3300050510 Bacteria 120971
300 nmdc:mga08y16_11018_c1 3300050511 Bacteria 9494
301 nmdc:mga08y16_183060_c1 3300050511 Bacteria 2175
302 nmdc:mga0n895_216621_c1 3300050512 Bacteria 1944
303 2643915045 2643221581 Bacteria 3893603
304 Ga0207677_10342522
305 Ga0070690_100002047
306 Ga0070670_100002859
307 Ga0070670_100016738
308 Ga0070670_100037019
309 Ga0070670_100043089
310 Ga0070670_100154082
311 Ga0070670_100460588
312 Ga0068869_100001945
313 Ga0068869_100071984
314 Ga0068869_100150086
315 Ga0070680_100101157
316 Ga0070680_100111434
317 Ga0070682_100073179
318 Ga0070682_100104518
319 Ga0070689_100002696
320 Ga0070661_100013405
321 Ga0070668_100001171
322 Ga0070668_100003427
323 Ga0070669_100053364
324 Ga0070669_100093788
325 Ga0070675_100001181
326 Ga0070675_100130728
327 Ga0070675_100202351
328 Ga0070675_100325861
329 Ga0070671_100130593
330 Ga0070674_100037421
331 Ga0070674_100070960
332 Ga0070673_100012559
333 Ga0070673_100044268
334 Ga0070688_100025863
335 Ga0070688_100128479
336 Ga0070667_100037461
337 Ga0070667_100208866
338 Ga0070709_10020648
339 Ga0070714_100003443
340 Ga0070714_100024430
341 Ga0070713_100073630
342 Ga0070713_100162114
343 Ga0070701_10004109
344 Ga0070711_100004071
345 Ga0070711_100199369
346 Ga0070705_100018762
347 Ga0070700_100067078
348 Ga0070694_100076201
349 Ga0070678_100090966
350 Ga0070662_100003755
351 Ga0070662_100152636
352 Ga0070681_10005180
353 Ga0070681_10134957
354 Ga0068867_100128759
355 Ga0070685_10081672
356 Ga0070698_100169155
357 Ga0070699_100088613
358 Ga0070679_100038007
359 Ga0070679_100094623
360 Ga0070684_100002503
361 Ga0070684_100062306
362 Ga0070672_100036500
363 Ga0070672_100048075
364 Ga0070672_100266133
365 Ga0070686_100007933
366 Ga0070686_100016499
367 Ga0070693_100017518
368 Ga0070665_100015484
369 Ga0070665_100020046
370 Ga0070665_100109813
371 Ga0070704_100045032
372 Ga0070664_100003243
373 Ga0070664_100008139
374 Ga0070664_100329427
375 Ga0068857_100012314
376 Ga0070702_100002349
377 Ga0070702_100071539
378 Ga0068859_100004100
379 Ga0068859_100031242
380 Ga0068864_100004576
381 Ga0068864_100008700
382 Ga0068864_100198757
383 Ga0068861_100009435
384 Ga0068861_100048246
385 Ga0068861_100055386
386 Ga0068861_100081290
387 Ga0068870_10081727
388 Ga0068863_100011987
389 Ga0068863_100019338
390 Ga0068863_100027137
391 Ga0068863_100033179
392 Ga0068858_100006053
393 Ga0068860_100046303
394 Ga0068860_100074980
395 Ga0068860_100138289
396 Ga0068860_100234470
397 Ga0068862_100001983
398 Ga0068862_100094024
399 Ga0068862_100130664
400 Ga0068862_100144866
401 Ga0068871_100176433
402 Ga0068871_100177421
403 Ga0068871_100206091
404 Ga0068871_100235526
405 Ga0075428_100010511
406 Ga0075428_100020542
407 Ga0075430_100001101
408 Ga0075430_100306382
409 Ga0075431_100000101
410 Ga0075431_100014749
411 Ga0075431_100018092
412 Ga0075431_100152550
413 Ga0075429_100005444
414 Ga0075429_100005700
415 Ga0075429_100201130
416 Ga0068865_100027245
417 Ga0068865_100112046
418 Ga0097620_100004100
419 Ga0097620_100031242
420 Ga0111539_10015223
421 Ga0111539_10026865
422 Ga0111539_10064992
423 Ga0114129_10000264
424 Ga0114129_10160484
425 Ga0105243_10092509
426 Ga0105243_10273117
427 Ga0105241_10055720
428 Ga0105242_10090772
429 Ga0105242_10276776
430 Ga0105248_10012994
431 Ga0105238_10295668
432 Ga0105249_10033958
433 Ga0105239_10708828
434 Ga0105246_10042777
435 Ga0157374_10267922
436 Ga0157378_10022889
437 Ga0157378_10072849
438 Ga0163162_10206597
439 Ga0157375_10022565
440 Ga0157375_10828049
441 Ga0163163_10009788
442 Ga0163163_10026594
443 Ga0163163_10034625
444 Ga0163163_10146365
445 Ga0163163_10225885
446 Ga0157380_10001671
447 Ga0157380_10018289
448 Ga0157380_10049825
449 Ga0157380_10200512
450 Ga0157377_10028625
451 Ga0157379_10265157
452 Ga0157379_10379941
453 Ga0157376_10072253
454 Ga0157376_10142253
455 Ga0157376_10312714
456 Ga0163161_10023319
457 Ga0163161_10074915
458 Ga0163161_10289975
459 Ga0207697_10034286
460 Ga0207688_10062377
461 Ga0207643_10081040
462 Ga0207695_10076721
463 Ga0207693_10008931
464 Ga0207663_10225682
465 Ga0207660_10069768
466 Ga0207660_10095880
467 Ga0207649_10089094
468 Ga0207681_10022044
469 Ga0207650_10001275
470 Ga0207650_10009101
471 Ga0207659_10000537
472 Ga0207659_10034288
473 Ga0207659_10059451
474 Ga0207659_10279446
475 Ga0207687_10408597
476 Ga0207700_10165033
477 Ga0207700_10497756
478 Ga0207664_10003858
479 Ga0207664_10023274
480 Ga0207644_10074949
481 Ga0207706_10063404
482 Ga0207709_10045392
483 Ga0207670_10088378
484 Ga0207669_10054014
485 Ga0207704_10028358
486 Ga0207704_10144845
487 Ga0207691_10006502
488 Ga0207691_10011369
489 Ga0207691_10030311
490 Ga0207691_10144309
491 Ga0207711_10017151
492 Ga0207689_10006657
493 Ga0207689_10032377
494 Ga0207689_10039985
495 Ga0207689_10118056
496 Ga0207679_10006564
497 Ga0207679_10301450
498 Ga0207679_10554443
499 Ga0207651_10003233
500 Ga0207651_10004708
501 Ga0207651_10025868
502 Ga0207712_10026057
503 Ga0207668_10001239
504 Ga0207668_10012990
505 Ga0207658_10000245
506 Ga0207658_10084761
507 Ga0207703_10073412
508 Ga0207708_10065784
509 Ga0207641_10005922
510 Ga0207641_10046568
511 Ga0207641_10049535
512 Ga0207641_10067520
513 Ga0207641_10174264
514 Ga0207648_10023133
515 Ga0207648_10080547
516 Ga0207648_10187954
517 Ga0207648_10261371
518 Ga0207676_10004282
519 Ga0207676_10013561
520 Ga0207676_10023473
521 Ga0207676_10067279
522 Ga0207676_10091554
523 Ga0207674_10022682
524 Ga0207675_100000731
525 Ga0207675_100002434
526 Ga0207675_100015088
527 Ga0207675_100038264
528 Ga0207675_100049605
529 Ga0207675_100099271
530 Ga0207683_10120353
531 Ga0207683_10140239
532 Ga0207428_10006308
533 Ga0207428_10026811
534 Ga0268266_10087360
535 Ga0268265_10002553
536 Ga0268265_10007614
537 Ga0268265_10092396
538 Ga0268265_10335924
539 Ga0268264_10038801
540 Ga0268264_10395463
541 Ga0265334_10007064
542 Ga0265334_10018235
543 Ga0307515_10165294
544 Ga0265338_10012444
545 Ga0265327_10000002
546 Ga0307513_10017649
547 Ga0307513_10018412
548 Ga0307513_10053707
549 Ga0307513_10154396
550 Ga0307509_10057888
551 Ga0307408_100053665
552 Ga0307408_100138496
553 Ga0265313_10000102
554 Ga0265313_10022654
555 Ga0307516_10002023
556 Ga0307410_10089591
557 Ga0307410_10179538
558 Ga0307412_10138654
559 Ga0307409_100055549
560 Ga0307409_100122491
561 Ga0307416_100256122
562 Ga0307414_10052913
563 Ga0307415_100074337
564 Ga0307415_100170848
565 Ga0373936_0009682
566 Ga0373956_0034549
567 Ga0373927_0000001
568 Ga0373937_0033671
569 Ga0400487_52682
570 Ga0451807_0567844
571 Ga0451807_1669249
572 Ga0439449_0009795
573 Ga0451576_0141502
574 Ga0466958_0045531
575 Ga0495590_0009997
576 Ga0495638_0000843
577 Ga0495638_0007803
578 Ga0495638_0034326
579 Ga0495616_0005517
580 Ga0495630_0039877
581 Ga0495668_0054927
582 Ga0495625_0065543
583 Ga0495625_0077653
584 Ga0496102_0055316
585 Ga0496110_0070015
586 Ga0496114_0031997
587 Ga0501034_0001434
588 Ga0501042_0062919
589 Ga0501068_0064436
590 Ga0501070_0018749
591 Ga0501070_0108276
592 Ga0501072_0138485
593 Ga0501073_0047169
594 Ga0501077_0079084
595 Ga0501080_0008336
596 Ga0501083_0077299
597 nmdc:mga05p37_12969_c1
598 nmdc:mga05p37_5259_c1
599 nmdc:mga09592_37021_c1
600 nmdc:mga0qj67_12711_c1
601 nmdc:mga06r32_655_c1
602 nmdc:mga06r32_8_c1
603 nmdc:mga08y16_11018_c1
604 nmdc:mga08y16_183060_c1
605 nmdc:mga0n895_216621_c1
606 2643915045

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00849

PseudoU_synth_2

RNA pseudouridylate synthase

110

260

0.96

PF01479

S4

S4 domain

37

82

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1prz-assembly1.cif.gz_A crystal structure of pseudouridine synthase rlud catalytic module 0.9725 74 319
1v9f-assembly1.cif.gz_A crystal structure of catalytic domain of pseudouridine synthase rlud from escherichia coli 0.9497 77 318
1prz-assembly1.cif.gz_A crystal structure of pseudouridine synthase rlud catalytic module 0.9461 74 319
1v9f-assembly1.cif.gz_A crystal structure of catalytic domain of pseudouridine synthase rlud from escherichia coli 0.9169 77 318
2i82-assembly2.cif.gz_B crystal structure of pseudouridine synthase rlua: indirect sequence readout through protein-induced rna structure 0.8839 83 300
ID Description Score Start End Superfamily
2istA01 Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain 0.9594 2 71 3.10.290.10
1v9fA01 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9488 83 299 3.30.2350.10
1v9fA01 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9442 83 299 3.30.2350.10
af_Q2FZ78_82_304_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9242 84 313 3.30.2350.10
2istA01 Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain 0.9213 2 71 3.10.290.10
ID Description Score Start End GO Terms
AF-A0A855HUZ1-F1-model_v4 deleted 0.983 170 317
AF-A0A3C1TX39-F1-model_v4 deleted 0.9709 1 70
AF-A0A3C1TWA9-F1-model_v4 deleted 0.9706 111 319
AF-A0A3D1B6R0-F1-model_v4 RNA pseudouridine synthase 0.9693 182 318 GO:0000455
GO:0003723
GO:0009982
GO:0140098
AF-A0A6I7NH23-F1-model_v4 RNA pseudouridine synthase 0.968 157 318 GO:0000455
GO:0003723
GO:0009982
GO:0140098

Map