F396643

General Info

Members Datasets Scaffolds Average Seq Length
302 169 604 219

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0388974|Ga0466967_0388974_557_1279
Length 240
Sequence MGGRAEKDALFEAIALMGKAFASPVRLELLDLLAQAPRSVEELARASGQSTPNTSQHLQALRAAGMVTRAREGNRVRYALAGEEALRLWLALRDASAARLGEVERAARDYLGDDVDTIGREDLLERLKRGDVVLVDVRPEEEYAAGHIKGARSIPLDELERRLAELPTDTEVVAYCRGPFCAFAHEAVRRLRAVGRDARRLQEGWPEWRLAAGPSNPHRAASGGGHARHRVSVRPPLRGR

Samples

Sample ID Description Type Environment
1 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
79 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
88 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
95 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
96 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
97 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
98 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
99 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
102 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
103 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
104 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
105 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
106 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
107 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
162 2506783011 Frankia datiscae Dg1 Isolate Nodule
163 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
164 2671180694 Paenibacillus sp. A3 Isolate Unclassified
165 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
166 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
167 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
168 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
169 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.02
Metatranscriptomes 0.33
Isolates 2.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.99
Nodule 0.33
Rhizoplane 12.58
Rhizosphere 84.11
Stem 0
Stem Tuber 0
Unclassified 3.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466967_0388974 3300045976 Unclassified 1355
2 JGI25406J46586_10006828 3300003203 Bacteria 5242
3 JGI25407J50210_10004458 3300003373 Bacteria 3406
4 Ga0070683_100447849 3300005329 Bacteria 1232
5 Ga0070683_100691421 3300005329 Bacteria 977
6 Ga0070682_100920364 3300005337 Bacteria 720
7 Ga0068868_100304278 3300005338 Bacteria 1355
8 Ga0070687_100184353 3300005343 Bacteria 1253
9 Ga0070671_100044801 3300005355 Bacteria 3676
10 Ga0070674_100190764 3300005356 Bacteria 1576
11 Ga0070667_100185082 3300005367 Bacteria 1843
12 Ga0070709_10077481 3300005434 Bacteria 2161
13 Ga0070714_100036110 3300005435 Bacteria 4144
14 Ga0070714_100198337 3300005435 Bacteria 1835
15 Ga0070714_100291805 3300005435 Unclassified 1518
16 Ga0070713_100032327 3300005436 Bacteria 4178
17 Ga0070713_100524856 3300005436 Bacteria 1119
18 Ga0070711_100101041 3300005439 Bacteria 2098
19 Ga0070711_100642778 3300005439 Unclassified 889
20 Ga0070694_100522827 3300005444 Bacteria 947
21 Ga0070663_100732355 3300005455 Bacteria 843
22 Ga0070679_100155949 3300005530 Bacteria 2258
23 Ga0070679_100704053 3300005530 Bacteria 953
24 Ga0070684_100035860 3300005535 Bacteria 4248
25 Ga0070684_100402626 3300005535 Bacteria 1262
26 Ga0070684_100671632 3300005535 Bacteria 965
27 Ga0070686_100579919 3300005544 Bacteria 881
28 Ga0070704_100054199 3300005549 Bacteria 2837
29 Ga0070704_100522798 3300005549 Bacteria 1033
30 Ga0070664_100050231 3300005564 Bacteria 3529
31 Ga0068857_100047070 3300005577 Bacteria 3828
32 Ga0068856_100600328 3300005614 Bacteria 1122
33 Ga0068852_100505502 3300005616 Bacteria 1204
34 Ga0068863_100062844 3300005841 Bacteria 3511
35 Ga0068858_100515355 3300005842 Bacteria 1156
36 Ga0068858_100614115 3300005842 Bacteria 1055
37 Ga0068860_100101828 3300005843 Bacteria 2740
38 Ga0068862_100002585 3300005844 Bacteria 15984
39 Ga0081455_10113882 3300005937 Bacteria 2144
40 Ga0081538_10002396 3300005981 Bacteria 18395
41 Ga0081538_10002762 3300005981 Bacteria 16828
42 Ga0081538_10006994 3300005981 Bacteria 9814
43 Ga0081538_10039813 3300005981 Bacteria 3008
44 Ga0081539_10001866 3300005985 Bacteria 33101
45 Ga0070717_10991063 3300006028 Bacteria 765
46 Ga0070716_100119576 3300006173 Bacteria 1647
47 Ga0070712_100084177 3300006175 Bacteria 2311
48 Ga0070712_100378498 3300006175 Bacteria 1165
49 Ga0075428_100096342 3300006844 Bacteria 3225
50 Ga0075428_100302624 3300006844 Bacteria 1719
51 Ga0075428_100343318 3300006844 Bacteria 1603
52 Ga0075430_100005008 3300006846 Bacteria 11154
53 Ga0075431_100008910 3300006847 Bacteria 10053
54 Ga0075431_100013059 3300006847 Bacteria 8388
55 Ga0075433_10072009 3300006852 Bacteria 3039
56 Ga0075433_10109650 3300006852 Bacteria 2449
57 Ga0075434_100041088 3300006871 Bacteria 4580
58 Ga0075429_100046010 3300006880 Bacteria 3797
59 Ga0075436_100273120 3300006914 Bacteria 1207
60 Ga0111539_10019879 3300009094 Bacteria 8275
61 Ga0111539_10613317 3300009094 Bacteria 1267
62 Ga0105245_10202867 3300009098 Bacteria 1905
63 Ga0114129_10008477 3300009147 Bacteria 14646
64 Ga0114129_10069434 3300009147 Bacteria 4911
65 Ga0114129_10357714 3300009147 Bacteria 1932
66 Ga0114129_11049535 3300009147 Unclassified 1023
67 Ga0105249_10017598 3300009553 Bacteria 6345
68 Ga0105246_10421119 3300011119 Bacteria 1114
69 Ga0157369_11353215 3300013105 Bacteria 725
70 Ga0157375_10347763 3300013308 Bacteria 1648
71 Ga0163163_10977388 3300014325 Bacteria 910
72 Ga0206353_11028994 3300020082 Unclassified 962
73 Ga0209566_100210 3300025225 Bacteria 59477
74 Ga0209025_1042012 3300025294 Bacteria 1949
75 Ga0207699_10103631 3300025906 Bacteria 1810
76 Ga0207654_10207775 3300025911 Bacteria 1292
77 Ga0207707_10199233 3300025912 Bacteria 1746
78 Ga0207693_10016705 3300025915 Bacteria 5862
79 Ga0207693_10116220 3300025915 Bacteria 2101
80 Ga0207663_10087495 3300025916 Bacteria 2058
81 Ga0207652_10077759 3300025921 Bacteria 2896
82 Ga0207700_10010505 3300025928 Bacteria 5846
83 Ga0207700_10177285 3300025928 Bacteria 1782
84 Ga0207700_10462828 3300025928 Bacteria 1119
85 Ga0207664_10281967 3300025929 Bacteria 1458
86 Ga0207664_10469203 3300025929 Unclassified 1125
87 Ga0207644_10052635 3300025931 Bacteria 2927
88 Ga0207690_10689775 3300025932 Bacteria 839
89 Ga0207669_10308020 3300025937 Bacteria 1207
90 Ga0207665_10139453 3300025939 Bacteria 1727
91 Ga0207665_10199499 3300025939 Bacteria 1457
92 Ga0207661_10243310 3300025944 Bacteria 1597
93 Ga0207679_10054238 3300025945 Bacteria 2950
94 Ga0207679_10810543 3300025945 Bacteria 854
95 Ga0207679_10950893 3300025945 Bacteria 787
96 Ga0207668_10033005 3300025972 Bacteria 3427
97 Ga0207640_10360072 3300025981 Bacteria 1172
98 Ga0207658_10009138 3300025986 Bacteria 6723
99 Ga0207703_10431390 3300026035 Bacteria 1228
100 Ga0207702_10506211 3300026078 Bacteria 1178
101 Ga0207702_10542095 3300026078 Bacteria 1137
102 Ga0207641_10071918 3300026088 Bacteria 2977
103 Ga0207674_10071354 3300026116 Bacteria 3490
104 Ga0207698_10130694 3300026142 Bacteria 2145
105 Ga0207428_10033423 3300027907 Bacteria 4224
106 Ga0207428_10084177 3300027907 Bacteria 2479
107 Ga0207428_10635103 3300027907 Bacteria 767
108 Ga0268265_10001203 3300028380 Bacteria 22514
109 Ga0268264_10452266 3300028381 Bacteria 1244
110 Ga0307405_10052046 3300031731 Bacteria 2544
111 Ga0307405_10133447 3300031731 Bacteria 1720
112 Ga0307413_10027542 3300031824 Bacteria 3151
113 Ga0307413_10599136 3300031824 Bacteria 901
114 Ga0307410_10153021 3300031852 Bacteria 1719
115 Ga0307410_10404431 3300031852 Bacteria 1104
116 Ga0307410_10472479 3300031852 Bacteria 1027
117 Ga0307406_10247497 3300031901 Bacteria 1341
118 Ga0307406_10720036 3300031901 Bacteria 835
119 Ga0307407_10142831 3300031903 Bacteria 1546
120 Ga0307409_100110030 3300031995 Bacteria 2308
121 Ga0307409_100115245 3300031995 Bacteria 2262
122 Ga0307416_100107401 3300032002 Bacteria 2449
123 Ga0307416_100126514 3300032002 Bacteria 2290
124 Ga0307416_100476697 3300032002 Bacteria 1307
125 Ga0307416_100784935 3300032002 Bacteria 1047
126 Ga0307414_10032114 3300032004 Bacteria 3454
127 Ga0307415_100052951 3300032126 Bacteria 2763
128 Ga0307415_100090482 3300032126 Bacteria 2214
129 Ga0307415_100101010 3300032126 Bacteria 2116
130 Ga0307415_100114798 3300032126 Bacteria 2006
131 Ga0307415_100251560 3300032126 Bacteria 1436
132 Ga0307415_100386316 3300032126 Bacteria 1190
133 Ga0307415_100643404 3300032126 Bacteria 949
134 Ga0373947_0329058 3300035725 Bacteria 1023
135 Ga0395899_0030620 3300037312 Bacteria 4046
136 Ga0395900_0321377 3300037418 Bacteria 1528
137 Ga0395900_0419414 3300037418 Archaea 1299
138 Ga0395900_0552593 3300037418 Bacteria 1096
139 Ga0395898_0027610 3300037466 Bacteria 5694
140 Ga0395898_0146991 3300037466 Bacteria 2256
141 Ga0395898_0199240 3300037466 Bacteria 1912
142 Ga0395898_0330980 3300037466 Bacteria 1452
143 Ga0395898_0436997 3300037466 Bacteria 1247
144 Ga0395898_0647272 3300037466 Bacteria 999
145 Ga0395905_0017396 3300037471 Bacteria 6826
146 Ga0395901_0038362 3300038443 Bacteria 4955
147 Ga0395901_0198298 3300038443 Archaea 2104
148 Ga0395901_0227036 3300038443 Bacteria 1950
149 Ga0395901_0245310 3300038443 Bacteria 1867
150 Ga0395901_0347260 3300038443 Bacteria 1532
151 Ga0395901_0547713 3300038443 Bacteria 1173
152 Ga0436365_0536224 3300039437 Bacteria 1013
153 Ga0439436_0019029 3300041404 Bacteria 2051
154 Ga0439449_0005345 3300042007 Bacteria 4919
155 Ga0439457_008927 3300042014 Bacteria 2348
156 Ga0450896_000812 3300042133 Bacteria 3540
157 Ga0439440_0048994 3300042993 Bacteria 1051
158 Ga0466965_0270912 3300044683 Bacteria 915
159 Ga0466963_0045401 3300044694 Bacteria 2894
160 Ga0466968_0014758 3300044735 Bacteria 3091
161 Ga0466960_0489772 3300044901 Bacteria 719
162 Ga0466967_0020501 3300045976 Bacteria 5347
163 Ga0466967_0167413 3300045976 Bacteria 2066
164 Ga0466967_0202526 3300045976 Bacteria 1880
165 Ga0466967_0418085 3300045976 Bacteria 1306
166 Ga0466967_0541052 3300045976 Bacteria 1146
167 Ga0466967_0584441 3300045976 Bacteria 1101
168 Ga0466967_0812556 3300045976 Bacteria 928
169 Ga0495603_0001292 3300046455 Bacteria 14588
170 Ga0495603_0219593 3300046455 Unclassified 1097
171 Ga0495651_0329137 3300046462 Bacteria 1016
172 Ga0495653_0055591 3300046463 Bacteria 3020
173 Ga0495582_0001116 3300046473 Bacteria 15085
174 Ga0495623_0413687 3300046679 Bacteria 723
175 Ga0495658_0000989 3300046683 Bacteria 15072
176 Ga0495613_0166324 3300046689 Bacteria 1567
177 Ga0495604_0012675 3300047317 Bacteria 6708
178 Ga0495687_004876 3300047443 Bacteria 8805
179 Ga0495675_0032423 3300047444 Bacteria 3334
180 Ga0496100_0018546 3300048903 Bacteria 4130
181 Ga0496101_0176217 3300048904 Bacteria 1645
182 Ga0496102_0552460 3300048905 Bacteria 1074
183 Ga0496103_0372387 3300048906 Unclassified 918
184 Ga0496104_0019518 3300048907 Bacteria 6204
185 Ga0496104_0074390 3300048907 Bacteria 3234
186 Ga0496105_0069374 3300048908 Bacteria 2913
187 Ga0496105_0604911 3300048908 Bacteria 850
188 Ga0496106_0012168 3300048909 Bacteria 6350
189 Ga0496107_0055223 3300048910 Bacteria 2869
190 Ga0496107_0145720 3300048910 Bacteria 1751
191 Ga0496107_0514794 3300048910 Bacteria 887
192 Ga0496108_0002653 3300048911 Bacteria 14328
193 Ga0496108_0062816 3300048911 Bacteria 3127
194 Ga0496108_0117534 3300048911 Bacteria 2278
195 Ga0496109_0004827 3300048912 Bacteria 11252
196 Ga0496109_0013894 3300048912 Bacteria 7000
197 Ga0496109_0153652 3300048912 Bacteria 2155
198 Ga0496109_0551755 3300048912 Bacteria 1087
199 Ga0496109_0859814 3300048912 Unclassified 845
200 Ga0496110_0002706 3300048913 Bacteria 13399
201 Ga0496110_0659309 3300048913 Bacteria 947
202 Ga0496111_0013204 3300048914 Bacteria 5615
203 Ga0496111_0055747 3300048914 Bacteria 2859
204 Ga0496111_0073022 3300048914 Bacteria 2498
205 Ga0496111_0104903 3300048914 Bacteria 2079
206 Ga0496112_0023927 3300048915 Bacteria 5843
207 Ga0496112_0024317 3300048915 Bacteria 5798
208 Ga0496112_0056282 3300048915 Bacteria 3870
209 Ga0496112_0263521 3300048915 Bacteria 1673
210 Ga0496113_0006162 3300048916 Bacteria 7569
211 Ga0496113_0012098 3300048916 Bacteria 5789
212 Ga0496113_0013738 3300048916 Bacteria 5499
213 Ga0496113_0045816 3300048916 Bacteria 3245
214 Ga0496113_0098706 3300048916 Bacteria 2261
215 Ga0496113_0147949 3300048916 Bacteria 1852
216 Ga0496114_0154434 3300048917 Bacteria 1992
217 Ga0496115_0198546 3300048918 Bacteria 1657
218 Ga0501031_0126014 3300049568 Bacteria 1673
219 Ga0501036_0187979 3300049572 Bacteria 1738
220 Ga0501036_0198395 3300049572 Bacteria 1688
221 Ga0501036_0335019 3300049572 Bacteria 1264
222 Ga0501038_0050846 3300049574 Bacteria 3580
223 Ga0501038_0344484 3300049574 Bacteria 1162
224 Ga0501039_0018106 3300049575 Bacteria 5406
225 Ga0501039_0153584 3300049575 Bacteria 1808
226 Ga0501040_0012053 3300049576 Bacteria 5658
227 Ga0501040_0068543 3300049576 Bacteria 2447
228 Ga0501040_0104590 3300049576 Bacteria 1977
229 Ga0501041_0022227 3300049577 Bacteria 3798
230 Ga0501041_0071246 3300049577 Unclassified 2134
231 Ga0501042_0022847 3300049578 Bacteria 4369
232 Ga0501042_0125232 3300049578 Bacteria 1850
233 Ga0501042_0499387 3300049578 Bacteria 883
234 Ga0501046_0091972 3300049580 Bacteria 2333
235 Ga0501046_0168269 3300049580 Bacteria 1646
236 Ga0501046_0527889 3300049580 Bacteria 843
237 Ga0501048_0053671 3300049582 Bacteria 2865
238 Ga0501048_0361250 3300049582 Bacteria 1036
239 Ga0501048_0378028 3300049582 Bacteria 1011
240 Ga0501071_0101208 3300049587 Bacteria 2124
241 Ga0501071_0125945 3300049587 Bacteria 1901
242 Ga0501071_0418297 3300049587 Bacteria 1024
243 Ga0501072_0027792 3300049588 Bacteria 4414
244 Ga0501072_0054667 3300049588 Bacteria 3146
245 Ga0501072_0172793 3300049588 Bacteria 1724
246 Ga0501072_0212946 3300049588 Bacteria 1540
247 Ga0501072_0263919 3300049588 Bacteria 1371
248 Ga0501074_0187778 3300049590 Bacteria 1474
249 Ga0501075_0041234 3300049591 Bacteria 3459
250 Ga0501075_0137188 3300049591 Bacteria 1863
251 Ga0501075_0276784 3300049591 Bacteria 1279
252 Ga0501076_0015790 3300049592 Bacteria 5711
253 Ga0501076_0022316 3300049592 Bacteria 4865
254 Ga0501076_0043434 3300049592 Bacteria 3542
255 Ga0501076_0269279 3300049592 Bacteria 1395
256 Ga0501076_0442521 3300049592 Bacteria 1070
257 Ga0501076_0631850 3300049592 Bacteria 883
258 Ga0501077_0024791 3300049593 Bacteria 3809
259 Ga0501077_0308518 3300049593 Unclassified 1009
260 Ga0501079_0040400 3300049741 Bacteria 3598
261 Ga0501079_0049176 3300049741 Bacteria 3254
262 Ga0501080_0357385 3300049742 Bacteria 1318
263 Ga0501081_0100141 3300049743 Bacteria 2048
264 Ga0501081_0173545 3300049743 Bacteria 1557
265 Ga0501081_0485701 3300049743 Bacteria 920
266 Ga0501081_0811305 3300049743 Bacteria 704
267 Ga0501035_0287951 3300049822 Bacteria 1387
268 Ga0501035_0992826 3300049822 Bacteria 660
269 Ga0501045_0229830 3300049824 Bacteria 1381
270 nmdc:mga05p37_164638_c1 3300050507 Bacteria 2707
271 nmdc:mga05p37_170898_c1 3300050507 Bacteria 2651
272 nmdc:mga05p37_212316_c1 3300050507 Bacteria 2339
273 nmdc:mga05p37_71655_c1 3300050507 Bacteria 4263
274 nmdc:mga09592_50975_c1 3300050508 Bacteria 3491
275 nmdc:mga09592_512559_c1 3300050508 Bacteria 1032
276 nmdc:mga0qj67_6831_c1 3300050509 Bacteria 8387
277 nmdc:mga06r32_16017_c1 3300050510 Bacteria 6824
278 nmdc:mga08y16_128776_c1 3300050511 Bacteria 2633
279 nmdc:mga08y16_170458_c1 3300050511 Bacteria 2261
280 nmdc:mga0n895_658505_c1 3300050512 Bacteria 1045
281 nmdc:mga0rr50_214841_c1 3300050513 Bacteria 1586
282 nmdc:mga0rr50_971091_c1 3300050513 Unclassified 724
283 nmdc:mga0a205_122463_c1 3300050515 Bacteria 2500
284 nmdc:mga0a205_49041_c1 3300050515 Bacteria 4075
285 Ga0495619_0228723 3300053085 Bacteria 1288
286 Ga0500573_0014213 3300053140 Bacteria 4501
287 Ga0501084_0008226 3300054114 Bacteria 8604
288 Ga0501082_0053398 3300060353 Bacteria 3484
289 Ga0501082_0162093 3300060353 Bacteria 1943
290 Ga0501082_0221564 3300060353 Bacteria 1646
291 Ga0530510_0085254 3300061734 Bacteria 2301
292 Ga0530510_0118436 3300061734 Bacteria 1943
293 Ga0530510_0285084 3300061734 Bacteria 1234
294 Ga0530510_0703617 3300061734 Bacteria 770
295 2506866751 2506783011 Bacteria 5323186
296 2595319917 2593339198 Bacteria 7267884
297 2673818766 2671180694 Bacteria 7506943
298 2686536951 2684623035 Bacteria 8032739
299 2808849221 2808606359 Bacteria 9866990
300 2897113796 2897109615 Bacteria 4009619
301 8055534896 8055531788 Bacteria 5249694
302 8057982451 8057977335 Bacteria 5694872
303 Ga0466967_0388974
304 JGI25406J46586_10006828
305 JGI25407J50210_10004458
306 Ga0070683_100447849
307 Ga0070683_100691421
308 Ga0070682_100920364
309 Ga0068868_100304278
310 Ga0070687_100184353
311 Ga0070671_100044801
312 Ga0070674_100190764
313 Ga0070667_100185082
314 Ga0070709_10077481
315 Ga0070714_100036110
316 Ga0070714_100198337
317 Ga0070714_100291805
318 Ga0070713_100032327
319 Ga0070713_100524856
320 Ga0070711_100101041
321 Ga0070711_100642778
322 Ga0070694_100522827
323 Ga0070663_100732355
324 Ga0070679_100155949
325 Ga0070679_100704053
326 Ga0070684_100035860
327 Ga0070684_100402626
328 Ga0070684_100671632
329 Ga0070686_100579919
330 Ga0070704_100054199
331 Ga0070704_100522798
332 Ga0070664_100050231
333 Ga0068857_100047070
334 Ga0068856_100600328
335 Ga0068852_100505502
336 Ga0068863_100062844
337 Ga0068858_100515355
338 Ga0068858_100614115
339 Ga0068860_100101828
340 Ga0068862_100002585
341 Ga0081455_10113882
342 Ga0081538_10002396
343 Ga0081538_10002762
344 Ga0081538_10006994
345 Ga0081538_10039813
346 Ga0081539_10001866
347 Ga0070717_10991063
348 Ga0070716_100119576
349 Ga0070712_100084177
350 Ga0070712_100378498
351 Ga0075428_100096342
352 Ga0075428_100302624
353 Ga0075428_100343318
354 Ga0075430_100005008
355 Ga0075431_100008910
356 Ga0075431_100013059
357 Ga0075433_10072009
358 Ga0075433_10109650
359 Ga0075434_100041088
360 Ga0075429_100046010
361 Ga0075436_100273120
362 Ga0111539_10019879
363 Ga0111539_10613317
364 Ga0105245_10202867
365 Ga0114129_10008477
366 Ga0114129_10069434
367 Ga0114129_10357714
368 Ga0114129_11049535
369 Ga0105249_10017598
370 Ga0105246_10421119
371 Ga0157369_11353215
372 Ga0157375_10347763
373 Ga0163163_10977388
374 Ga0206353_11028994
375 Ga0209566_100210
376 Ga0209025_1042012
377 Ga0207699_10103631
378 Ga0207654_10207775
379 Ga0207707_10199233
380 Ga0207693_10016705
381 Ga0207693_10116220
382 Ga0207663_10087495
383 Ga0207652_10077759
384 Ga0207700_10010505
385 Ga0207700_10177285
386 Ga0207700_10462828
387 Ga0207664_10281967
388 Ga0207664_10469203
389 Ga0207644_10052635
390 Ga0207690_10689775
391 Ga0207669_10308020
392 Ga0207665_10139453
393 Ga0207665_10199499
394 Ga0207661_10243310
395 Ga0207679_10054238
396 Ga0207679_10810543
397 Ga0207679_10950893
398 Ga0207668_10033005
399 Ga0207640_10360072
400 Ga0207658_10009138
401 Ga0207703_10431390
402 Ga0207702_10506211
403 Ga0207702_10542095
404 Ga0207641_10071918
405 Ga0207674_10071354
406 Ga0207698_10130694
407 Ga0207428_10033423
408 Ga0207428_10084177
409 Ga0207428_10635103
410 Ga0268265_10001203
411 Ga0268264_10452266
412 Ga0307405_10052046
413 Ga0307405_10133447
414 Ga0307413_10027542
415 Ga0307413_10599136
416 Ga0307410_10153021
417 Ga0307410_10404431
418 Ga0307410_10472479
419 Ga0307406_10247497
420 Ga0307406_10720036
421 Ga0307407_10142831
422 Ga0307409_100110030
423 Ga0307409_100115245
424 Ga0307416_100107401
425 Ga0307416_100126514
426 Ga0307416_100476697
427 Ga0307416_100784935
428 Ga0307414_10032114
429 Ga0307415_100052951
430 Ga0307415_100090482
431 Ga0307415_100101010
432 Ga0307415_100114798
433 Ga0307415_100251560
434 Ga0307415_100386316
435 Ga0307415_100643404
436 Ga0373947_0329058
437 Ga0395899_0030620
438 Ga0395900_0321377
439 Ga0395900_0419414
440 Ga0395900_0552593
441 Ga0395898_0027610
442 Ga0395898_0146991
443 Ga0395898_0199240
444 Ga0395898_0330980
445 Ga0395898_0436997
446 Ga0395898_0647272
447 Ga0395905_0017396
448 Ga0395901_0038362
449 Ga0395901_0198298
450 Ga0395901_0227036
451 Ga0395901_0245310
452 Ga0395901_0347260
453 Ga0395901_0547713
454 Ga0436365_0536224
455 Ga0439436_0019029
456 Ga0439449_0005345
457 Ga0439457_008927
458 Ga0450896_000812
459 Ga0439440_0048994
460 Ga0466965_0270912
461 Ga0466963_0045401
462 Ga0466968_0014758
463 Ga0466960_0489772
464 Ga0466967_0020501
465 Ga0466967_0167413
466 Ga0466967_0202526
467 Ga0466967_0418085
468 Ga0466967_0541052
469 Ga0466967_0584441
470 Ga0466967_0812556
471 Ga0495603_0001292
472 Ga0495603_0219593
473 Ga0495651_0329137
474 Ga0495653_0055591
475 Ga0495582_0001116
476 Ga0495623_0413687
477 Ga0495658_0000989
478 Ga0495613_0166324
479 Ga0495604_0012675
480 Ga0495687_004876
481 Ga0495675_0032423
482 Ga0496100_0018546
483 Ga0496101_0176217
484 Ga0496102_0552460
485 Ga0496103_0372387
486 Ga0496104_0019518
487 Ga0496104_0074390
488 Ga0496105_0069374
489 Ga0496105_0604911
490 Ga0496106_0012168
491 Ga0496107_0055223
492 Ga0496107_0145720
493 Ga0496107_0514794
494 Ga0496108_0002653
495 Ga0496108_0062816
496 Ga0496108_0117534
497 Ga0496109_0004827
498 Ga0496109_0013894
499 Ga0496109_0153652
500 Ga0496109_0551755
501 Ga0496109_0859814
502 Ga0496110_0002706
503 Ga0496110_0659309
504 Ga0496111_0013204
505 Ga0496111_0055747
506 Ga0496111_0073022
507 Ga0496111_0104903
508 Ga0496112_0023927
509 Ga0496112_0024317
510 Ga0496112_0056282
511 Ga0496112_0263521
512 Ga0496113_0006162
513 Ga0496113_0012098
514 Ga0496113_0013738
515 Ga0496113_0045816
516 Ga0496113_0098706
517 Ga0496113_0147949
518 Ga0496114_0154434
519 Ga0496115_0198546
520 Ga0501031_0126014
521 Ga0501036_0187979
522 Ga0501036_0198395
523 Ga0501036_0335019
524 Ga0501038_0050846
525 Ga0501038_0344484
526 Ga0501039_0018106
527 Ga0501039_0153584
528 Ga0501040_0012053
529 Ga0501040_0068543
530 Ga0501040_0104590
531 Ga0501041_0022227
532 Ga0501041_0071246
533 Ga0501042_0022847
534 Ga0501042_0125232
535 Ga0501042_0499387
536 Ga0501046_0091972
537 Ga0501046_0168269
538 Ga0501046_0527889
539 Ga0501048_0053671
540 Ga0501048_0361250
541 Ga0501048_0378028
542 Ga0501071_0101208
543 Ga0501071_0125945
544 Ga0501071_0418297
545 Ga0501072_0027792
546 Ga0501072_0054667
547 Ga0501072_0172793
548 Ga0501072_0212946
549 Ga0501072_0263919
550 Ga0501074_0187778
551 Ga0501075_0041234
552 Ga0501075_0137188
553 Ga0501075_0276784
554 Ga0501076_0015790
555 Ga0501076_0022316
556 Ga0501076_0043434
557 Ga0501076_0269279
558 Ga0501076_0442521
559 Ga0501076_0631850
560 Ga0501077_0024791
561 Ga0501077_0308518
562 Ga0501079_0040400
563 Ga0501079_0049176
564 Ga0501080_0357385
565 Ga0501081_0100141
566 Ga0501081_0173545
567 Ga0501081_0485701
568 Ga0501081_0811305
569 Ga0501035_0287951
570 Ga0501035_0992826
571 Ga0501045_0229830
572 nmdc:mga05p37_164638_c1
573 nmdc:mga05p37_170898_c1
574 nmdc:mga05p37_212316_c1
575 nmdc:mga05p37_71655_c1
576 nmdc:mga09592_50975_c1
577 nmdc:mga09592_512559_c1
578 nmdc:mga0qj67_6831_c1
579 nmdc:mga06r32_16017_c1
580 nmdc:mga08y16_128776_c1
581 nmdc:mga08y16_170458_c1
582 nmdc:mga0n895_658505_c1
583 nmdc:mga0rr50_214841_c1
584 nmdc:mga0rr50_971091_c1
585 nmdc:mga0a205_122463_c1
586 nmdc:mga0a205_49041_c1
587 Ga0495619_0228723
588 Ga0500573_0014213
589 Ga0501084_0008226
590 Ga0501082_0053398
591 Ga0501082_0162093
592 Ga0501082_0221564
593 Ga0530510_0085254
594 Ga0530510_0118436
595 Ga0530510_0285084
596 Ga0530510_0703617
597 2506866751
598 2595319917
599 2673818766
600 2686536951
601 2808849221
602 2897113796
603 8055534896
604 8057982451

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01022

HTH_5

Bacterial regulatory protein, arsR family

23

69

0.97

PF12840

HTH_20

Helix-turn-helix domain

21

70

0.97

PF09339

HTH_IclR

IclR helix-turn-helix domain

26

71

0.96

PF00581

Rhodanese

Rhodanese-like domain

119

211

0.93

PF12802

MarR_2

MarR family

23

75

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1r22-assembly1.cif.gz_B crystal structure of the cyanobacterial metallothionein repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-form 0.9548 9 97
5j6x-assembly2.cif.gz_B crystal structure of the apo-zalpha of zebrafish pkz 0.9509 29 81
2kko-assembly1.cif.gz_B solution nmr structure of the homodimeric winged helix-turn-helix dna-binding domain (fragment 1-100) mb0332 from mycobacterium bovis, a possible arsr-family transcriptional regulator. northeast structural genomics consortium target mbr242e. 0.9441 7 102
8cll-assembly1.cif.gz_F structural insights into human tfiiic promoter recognition 0.9341 38 80
6j0e-assembly1.cif.gz_B structures of two arsr as(iii)-responsive repressors: implications for the mechanism of derepression 0.9333 12 80
ID Description Score Start End Superfamily
af_Q58793_322_389_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9907 21 81 1.10.10.10
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.977 23 79 1.10.10.10
af_Q58948_3_81_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9649 23 95 1.10.10.10
af_Q4DZU8_467_618_3.30.230.130 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Cullin; Chain C, Domain 2 0.9631 36 80 3.30.230.130
af_P76066_81_136_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9559 36 80 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3R8HSW6-F1-model_v4 deleted 0.9949 15 80
AF-M3HKB8-F1-model_v4 Transcriptional regulator, ArsR family 0.9922 12 80 GO:0003700
AF-A0A132Z933-F1-model_v4 Transcriptional regulator 0.9778 12 80 GO:0003677
GO:0003700
AF-A0A0F9HS04-F1-model_v4 HTH arsR-type domain-containing protein 0.9742 9 82 GO:0003700
AF-A0A7X0KBD4-F1-model_v4 deleted 0.9721 12 80

Map