F396561

General Info

Members Datasets Scaffolds Average Seq Length
302 208 604 268

Family's Representative Sequence

Representative Sequence 3300028577|Ga0265318_10075769|Ga0265318_100757692
Length 259
Sequence MNERASPGLKIATAAGLLFIYIPLAFILLYAFTSEDRSFQFPPPGYTLRWFGVAWGRDDIWAALWLSVRIAILATIAAAALSRSGFYGRDSISLLFVLPIALPGIVTGIALRSAFDLADIPFSFWTIVMGHATFCIVVVFNNAIARFRRLSPSLMEASMDLGADGFQTFARIVLPNIATALLAGGMLAFALSFDEVIVTTFTAGQQTTLPIWMLSELVRPRQRPVTNVVAVFVIAITFLPILAAYYLSAGRDTVAGQGK

Samples

Sample ID Description Type Environment
1 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
2 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
100 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
107 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
110 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
111 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
112 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
122 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
123 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
124 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
125 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
126 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
127 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
128 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
129 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
130 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
131 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
132 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
133 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
134 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
135 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
136 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
137 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
138 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
139 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
140 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
143 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
144 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
145 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
146 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
147 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
148 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
149 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
150 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
151 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
152 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
153 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
156 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
163 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
164 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
165 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
177 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
178 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
179 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
180 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
181 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
182 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
183 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
184 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
185 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
186 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
187 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
190 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
191 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
192 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
193 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
194 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
195 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
196 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
197 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
198 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
199 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
200 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
201 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
202 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
203 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
204 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
205 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
206 2909042592 Labrys sp. LIt4 Isolate Nodule
207 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
208 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.68
Metatranscriptomes 0.66
Isolates 1.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.33
Nodule 0.33
Rhizoplane 10.26
Rhizosphere 88.08
Stem 0
Stem Tuber 0
Unclassified 0.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265318_10075769 3300028577 Bacteria 1245
2 JGI24033J26618_1002129 3300002155 Bacteria 1998
3 JGI24751J29686_10000263 3300002459 Bacteria 20410
4 Ga0065715_10004261 3300005293 Bacteria 4374
5 Ga0070676_10191431 3300005328 Bacteria 1336
6 Ga0070683_100020374 3300005329 Bacteria 5903
7 Ga0070683_100435721 3300005329 Bacteria 1251
8 Ga0070670_100180386 3300005331 Bacteria 1833
9 Ga0070677_10182553 3300005333 Bacteria 1000
10 Ga0070687_100009952 3300005343 Bacteria 4091
11 Ga0070661_100016706 3300005344 Bacteria 5194
12 Ga0070668_100055693 3300005347 Bacteria 3053
13 Ga0070675_100032348 3300005354 Bacteria 4233
14 Ga0070713_100254581 3300005436 Bacteria 1603
15 Ga0070713_100357788 3300005436 Bacteria 1356
16 Ga0070710_10134038 3300005437 Bacteria 1513
17 Ga0070705_100471205 3300005440 Bacteria 947
18 Ga0070700_100002257 3300005441 Bacteria 9814
19 Ga0070708_100010970 3300005445 Bacteria 7362
20 Ga0070708_100049874 3300005445 Bacteria 3704
21 Ga0070708_100241998 3300005445 Bacteria 1694
22 Ga0070663_100046125 3300005455 Bacteria 3082
23 Ga0070681_10070154 3300005458 Bacteria 3470
24 Ga0068867_100038594 3300005459 Bacteria 3477
25 Ga0068867_100221230 3300005459 Bacteria 1526
26 Ga0070707_100165969 3300005468 Bacteria 2152
27 Ga0070698_100163681 3300005471 Bacteria 2168
28 Ga0070698_100243924 3300005471 Bacteria 1730
29 Ga0070698_100621910 3300005471 Bacteria 1021
30 Ga0070699_100084796 3300005518 Bacteria 2765
31 Ga0070699_100450509 3300005518 Unclassified 1167
32 Ga0070679_100218886 3300005530 Bacteria 1866
33 Ga0070684_100005002 3300005535 Bacteria 10125
34 Ga0070697_100002322 3300005536 Bacteria 14620
35 Ga0070697_100168303 3300005536 Bacteria 1854
36 Ga0070697_100213774 3300005536 Bacteria 1642
37 Ga0070695_100002484 3300005545 Bacteria 10612
38 Ga0070696_100137292 3300005546 Bacteria 1784
39 Ga0070696_100279984 3300005546 Bacteria 1271
40 Ga0070665_100305256 3300005548 Bacteria 1595
41 Ga0070665_100702139 3300005548 Bacteria 1025
42 Ga0070664_100003486 3300005564 Bacteria 12706
43 Ga0068857_100159959 3300005577 Bacteria 2043
44 Ga0068859_100150942 3300005617 Bacteria 2399
45 Ga0068864_100045508 3300005618 Bacteria 3764
46 Ga0068870_10000341 3300005840 Bacteria 17484
47 Ga0068863_100002632 3300005841 Bacteria 17773
48 Ga0068863_100494881 3300005841 Bacteria 1203
49 Ga0068858_100062165 3300005842 Bacteria 3453
50 Ga0068860_100279608 3300005843 Bacteria 1631
51 Ga0068862_100049657 3300005844 Bacteria 3583
52 Ga0068862_100063028 3300005844 Bacteria 3190
53 Ga0081538_10025083 3300005981 Bacteria 4221
54 Ga0081540_1050068 3300005983 Bacteria 2078
55 Ga0070716_100036355 3300006173 Bacteria 2715
56 Ga0070712_100536229 3300006175 Bacteria 985
57 Ga0075367_10225207 3300006178 Bacteria 1174
58 Ga0075430_100099165 3300006846 Bacteria 2433
59 Ga0075431_100001445 3300006847 Bacteria 21876
60 Ga0075431_100038265 3300006847 Bacteria 4939
61 Ga0075431_100627519 3300006847 Bacteria 1057
62 Ga0075433_10122458 3300006852 Bacteria 2310
63 Ga0075434_100300427 3300006871 Bacteria 1626
64 Ga0075434_100466171 3300006871 Bacteria 1284
65 Ga0075434_100546493 3300006871 Bacteria 1178
66 Ga0075429_100105660 3300006880 Bacteria 2460
67 Ga0075429_100173973 3300006880 Bacteria 1886
68 Ga0068865_100028038 3300006881 Bacteria 3726
69 Ga0068865_100047733 3300006881 Bacteria 2944
70 Ga0075436_100011810 3300006914 Bacteria 5992
71 Ga0075436_100178624 3300006914 Bacteria 1500
72 Ga0097620_100150941 3300006931 Bacteria 2399
73 Ga0075435_100014925 3300007076 Bacteria 5826
74 Ga0105251_10054772 3300009011 Bacteria 1893
75 Ga0105247_10002602 3300009101 Bacteria 12197
76 Ga0114129_10006974 3300009147 Bacteria 16079
77 Ga0114129_10163756 3300009147 Bacteria 3036
78 Ga0114129_10658005 3300009147 Bacteria 1351
79 Ga0105243_10097803 3300009148 Bacteria 2430
80 Ga0105243_10215775 3300009148 Bacteria 1692
81 Ga0105242_10319298 3300009176 Bacteria 1424
82 Ga0105249_10007708 3300009553 Bacteria 9380
83 Ga0105249_10158388 3300009553 Bacteria 2186
84 Ga0105249_10340030 3300009553 Bacteria 1517
85 Ga0105239_10129469 3300010375 Bacteria 2806
86 Ga0105239_10464282 3300010375 Bacteria 1437
87 Ga0105239_10540339 3300010375 Bacteria 1327
88 Ga0105239_10648316 3300010375 Bacteria 1206
89 Ga0105246_10014336 3300011119 Bacteria 4984
90 Ga0105246_10014433 3300011119 Bacteria 4969
91 Ga0157373_10059271 3300013100 Bacteria 2712
92 Ga0157375_10011932 3300013308 Bacteria 7688
93 Ga0163163_10034793 3300014325 Bacteria 4882
94 Ga0163163_10212996 3300014325 Bacteria 1981
95 Ga0157380_10161503 3300014326 Bacteria 1948
96 Ga0157380_10476105 3300014326 Bacteria 1206
97 Ga0157377_10011186 3300014745 Bacteria 4472
98 Ga0157379_10048594 3300014968 Bacteria 3787
99 Ga0157376_10051657 3300014969 Bacteria 3415
100 Ga0163161_10009615 3300017792 Bacteria 6687
101 Ga0206354_11124728 3300020081 Bacteria 2279
102 Ga0206353_10862499 3300020082 Bacteria 2155
103 Ga0207643_10003956 3300025908 Bacteria 7976
104 Ga0207705_10412123 3300025909 Bacteria 1046
105 Ga0207707_10086306 3300025912 Bacteria 2743
106 Ga0207695_10188898 3300025913 Bacteria 1978
107 Ga0207649_10026340 3300025920 Bacteria 3401
108 Ga0207652_10146959 3300025921 Bacteria 2110
109 Ga0207646_10083540 3300025922 Bacteria 2857
110 Ga0207646_10187014 3300025922 Bacteria 1871
111 Ga0207646_10480200 3300025922 Bacteria 1121
112 Ga0207650_10176554 3300025925 Bacteria 1700
113 Ga0207706_10180235 3300025933 Bacteria 1855
114 Ga0207704_10125712 3300025938 Bacteria 1765
115 Ga0207665_10106897 3300025939 Bacteria 1961
116 Ga0207661_10005378 3300025944 Bacteria 9021
117 Ga0207661_10016433 3300025944 Bacteria 5460
118 Ga0207679_10177227 3300025945 Bacteria 1760
119 Ga0207712_10186361 3300025961 Bacteria 1634
120 Ga0207668_10020539 3300025972 Bacteria 4199
121 Ga0207640_10428193 3300025981 Bacteria 1085
122 Ga0207658_10322592 3300025986 Bacteria 1337
123 Ga0207703_10130644 3300026035 Bacteria 2168
124 Ga0207678_10047076 3300026067 Bacteria 3730
125 Ga0207708_10003728 3300026075 Bacteria 11244
126 Ga0207708_10253513 3300026075 Bacteria 1419
127 Ga0207641_10007388 3300026088 Bacteria 9142
128 Ga0207648_10381357 3300026089 Bacteria 1275
129 Ga0207676_10130386 3300026095 Bacteria 2136
130 Ga0207674_10004066 3300026116 Bacteria 17727
131 Ga0207675_100058548 3300026118 Bacteria 3596
132 Ga0207683_10116618 3300026121 Bacteria 2394
133 Ga0207428_10032560 3300027907 Bacteria 4286
134 Ga0268265_10111183 3300028380 Bacteria 2237
135 Ga0268265_10129454 3300028380 Bacteria 2095
136 Ga0268265_10374701 3300028380 Bacteria 1307
137 Ga0265325_10112923 3300031241 Bacteria 1318
138 Ga0265340_10012137 3300031247 Bacteria 4553
139 Ga0265340_10013540 3300031247 Bacteria 4282
140 Ga0265340_10028233 3300031247 Bacteria 2824
141 Ga0265340_10138852 3300031247 Bacteria 1112
142 Ga0265339_10012261 3300031249 Bacteria 5240
143 Ga0265339_10015106 3300031249 Bacteria 4639
144 Ga0265339_10060364 3300031249 Bacteria 2044
145 Ga0265331_10017775 3300031250 Bacteria 3702
146 Ga0265316_10005374 3300031344 Bacteria 12463
147 Ga0265316_10019721 3300031344 Bacteria 5758
148 Ga0265313_10000884 3300031595 Bacteria 30275
149 Ga0265313_10005930 3300031595 Bacteria 8842
150 Ga0265313_10008452 3300031595 Bacteria 6831
151 Ga0265313_10010418 3300031595 Bacteria 5877
152 Ga0265313_10011125 3300031595 Bacteria 5612
153 Ga0265314_10017554 3300031711 Bacteria 5613
154 Ga0265314_10054902 3300031711 Bacteria 2754
155 Ga0265314_10058690 3300031711 Bacteria 2636
156 Ga0265342_10197695 3300031712 Bacteria 1094
157 Ga0316576_10181470 3300031727 Bacteria 1588
158 Ga0307409_100085760 3300031995 Bacteria 2561
159 Ga0373936_0096820 3300035113 Bacteria 1242
160 Ga0373939_0007389 3300035114 Bacteria 2669
161 Ga0373961_0051800 3300035241 Bacteria 1220
162 Ga0373933_0279835 3300035724 Bacteria 1078
163 Ga0373947_0008051 3300035725 Bacteria 6079
164 Ga0373937_0005945 3300036401 Bacteria 10504
165 Ga0373937_0072265 3300036401 Bacteria 3182
166 Ga0373937_0505922 3300036401 Bacteria 1148
167 Ga0373925_0058384 3300037068 Bacteria 2893
168 Ga0395899_0125123 3300037312 Bacteria 1839
169 Ga0395900_0105037 3300037418 Bacteria 2902
170 Ga0395898_0011073 3300037466 Bacteria 9393
171 Ga0395905_0003153 3300037471 Bacteria 17758
172 Ga0395905_0038618 3300037471 Bacteria 4480
173 Ga0395901_0419843 3300038443 Bacteria 1372
174 Ga0439466_0044580 3300041411 Bacteria 1469
175 Ga0451789_0806341 3300041443 Bacteria 2161
176 Ga0451800_0001038 3300041459 Bacteria 3918
177 Ga0451802_2098993 3300041460 Bacteria 1422
178 Ga0451804_0896768 3300041463 Bacteria 2023
179 Ga0451835_0547320 3300041492 Bacteria 1898
180 Ga0451839_0414527 3300041496 Bacteria 1392
181 Ga0451847_0716446 3300041503 Bacteria 5727
182 Ga0439448_0140322 3300042005 Bacteria 836
183 Ga0466969_0104386 3300044656 Bacteria 1331
184 Ga0466971_0044698 3300044719 Bacteria 1989
185 Ga0466957_0062456 3300044842 Bacteria 2288
186 Ga0466959_0023617 3300045049 Bacteria 4551
187 Ga0466967_0069904 3300045976 Bacteria 3140
188 Ga0466967_0773692 3300045976 Bacteria 952
189 Ga0495603_0000740 3300046455 Bacteria 18651
190 Ga0495629_0000841 3300046459 Bacteria 24882
191 Ga0495580_0004062 3300046472 Bacteria 12353
192 Ga0495582_0000461 3300046473 Bacteria 22212
193 Ga0495639_0003136 3300046475 Bacteria 7182
194 Ga0495594_0004429 3300046499 Bacteria 7226
195 Ga0495628_0351027 3300046516 Bacteria 1084
196 Ga0495630_0061892 3300046517 Bacteria 2811
197 Ga0495621_0020260 3300046539 Bacteria 2181
198 Ga0495634_0042228 3300046642 Bacteria 3094
199 Ga0495635_0138663 3300046663 Bacteria 1657
200 Ga0495588_0001977 3300046674 Bacteria 8764
201 Ga0495658_0018191 3300046683 Bacteria 3648
202 Ga0495613_0000595 3300046689 Bacteria 29139
203 Ga0495670_0201945 3300046691 Bacteria 1053
204 Ga0495589_0136902 3300046794 Bacteria 1174
205 Ga0495581_0011315 3300047315 Bacteria 5161
206 Ga0495593_0006408 3300047673 Bacteria 6901
207 Ga0495614_0003145 3300048089 Bacteria 7365
208 Ga0496102_0045463 3300048905 Bacteria 3987
209 Ga0496102_0064505 3300048905 Bacteria 3354
210 Ga0496104_0028197 3300048907 Bacteria 5203
211 Ga0496104_0593792 3300048907 Bacteria 1018
212 Ga0496105_0172284 3300048908 Bacteria 1774
213 Ga0496105_0178937 3300048908 Bacteria 1737
214 Ga0496105_0275084 3300048908 Bacteria 1359
215 Ga0496106_0014073 3300048909 Bacteria 5911
216 Ga0496106_0465529 3300048909 Bacteria 1015
217 Ga0496107_0013903 3300048910 Bacteria 5628
218 Ga0496107_0017189 3300048910 Bacteria 5088
219 Ga0496107_0044327 3300048910 Bacteria 3197
220 Ga0496108_0140998 3300048911 Bacteria 2077
221 Ga0496108_0210065 3300048911 Bacteria 1690
222 Ga0496109_0003866 3300048912 Bacteria 12506
223 Ga0496109_0450837 3300048912 Bacteria 1215
224 Ga0496110_0174362 3300048913 Bacteria 1952
225 Ga0496110_0189511 3300048913 Bacteria 1868
226 Ga0496110_0271409 3300048913 Bacteria 1544
227 Ga0496112_0079473 3300048915 Bacteria 3244
228 Ga0496112_0222473 3300048915 Bacteria 1843
229 Ga0496112_0267430 3300048915 Bacteria 1658
230 Ga0496113_0188883 3300048916 Bacteria 1635
231 Ga0496113_0192898 3300048916 Bacteria 1617
232 Ga0496114_0032206 3300048917 Bacteria 4314
233 Ga0496114_0076218 3300048917 Bacteria 2826
234 Ga0496114_0311738 3300048917 Bacteria 1390
235 Ga0501032_0182714 3300049569 Bacteria 1373
236 Ga0501033_0003446 3300049570 Bacteria 13000
237 Ga0501034_0043064 3300049571 Bacteria 4569
238 Ga0501034_0180251 3300049571 Bacteria 2077
239 Ga0501034_0210695 3300049571 Bacteria 1899
240 Ga0501034_0461080 3300049571 Bacteria 1187
241 Ga0501036_0009519 3300049572 Bacteria 7993
242 Ga0501036_0314522 3300049572 Bacteria 1309
243 Ga0501036_0588789 3300049572 Bacteria 923
244 Ga0501037_0010827 3300049573 Bacteria 6700
245 Ga0501038_0021583 3300049574 Bacteria 5778
246 Ga0501038_0266031 3300049574 Bacteria 1353
247 Ga0501039_0140314 3300049575 Bacteria 1898
248 Ga0501042_0004481 3300049578 Bacteria 8910
249 Ga0501046_0082137 3300049580 Bacteria 2489
250 Ga0501047_0005515 3300049581 Bacteria 11906
251 Ga0501047_0160840 3300049581 Bacteria 2117
252 Ga0501048_0000273 3300049582 Bacteria 34673
253 Ga0501048_0098299 3300049582 Bacteria 2065
254 Ga0501067_0036746 3300049583 Bacteria 2719
255 Ga0501067_0047551 3300049583 Bacteria 2379
256 Ga0501069_0014353 3300049585 Bacteria 4235
257 Ga0501069_0144292 3300049585 Bacteria 1367
258 Ga0501070_0319411 3300049586 Bacteria 1263
259 Ga0501071_0008839 3300049587 Bacteria 6678
260 Ga0501072_0041568 3300049588 Bacteria 3611
261 Ga0501073_0034950 3300049589 Bacteria 3574
262 Ga0501074_0126264 3300049590 Bacteria 1830
263 Ga0501075_0008519 3300049591 Bacteria 7150
264 Ga0501076_0015924 3300049592 Bacteria 5689
265 Ga0501080_0128483 3300049742 Bacteria 2346
266 Ga0501080_0214542 3300049742 Bacteria 1763
267 Ga0501083_0002080 3300049744 Bacteria 13777
268 Ga0501083_0054750 3300049744 Bacteria 2676
269 Ga0501083_0287151 3300049744 Bacteria 1070
270 Ga0501035_0031992 3300049822 Bacteria 4790
271 Ga0501035_0060126 3300049822 Bacteria 3383
272 Ga0501044_0009378 3300049823 Bacteria 10666
273 Ga0501044_0082477 3300049823 Bacteria 3253
274 Ga0501044_0168839 3300049823 Bacteria 2160
275 Ga0501045_0012121 3300049824 Bacteria 6066
276 nmdc:mga05p37_11818_c1 3300050507 Bacteria 10407
277 nmdc:mga05p37_63064_c1 3300050507 Bacteria 4562
278 nmdc:mga05p37_673865_c1 3300050507 Bacteria 1154
279 nmdc:mga09592_16186_c1 3300050508 Bacteria 6096
280 nmdc:mga09592_50789_c1 3300050508 Bacteria 2905
281 nmdc:mga0qj67_135120_c1 3300050509 Bacteria 1998
282 nmdc:mga06r32_22935_c1 3300050510 Bacteria 5773
283 nmdc:mga06r32_64071_c1 3300050510 Bacteria 3544
284 nmdc:mga08y16_132366_c1 3300050511 Bacteria 2593
285 nmdc:mga0n895_482773_c1 3300050512 Bacteria 1250
286 nmdc:mga0rr50_484526_c1 3300050513 Bacteria 1051
287 nmdc:mga08x19_46654_c1 3300050514 Bacteria 2772
288 nmdc:mga0a205_155098_c1 3300050515 Bacteria 2188
289 nmdc:mga0a205_24382_c1 3300050515 Bacteria 5753
290 Ga0495612_0118457 3300053078 Bacteria 1138
291 Ga0495619_0017554 3300053085 Bacteria 4532
292 Ga0495619_0084235 3300053085 Bacteria 2145
293 Ga0501084_0014600 3300054114 Bacteria 6511
294 Ga0501082_0005743 3300060353 Bacteria 10765
295 Ga0501082_0033044 3300060353 Bacteria 4461
296 Ga0501082_0190837 3300060353 Bacteria 1782
297 Ga0530510_0000328 3300061734 Bacteria 30598
298 2883296495 2883291878 Bacteria 5894118
299 2883359191 2883354860 Bacteria 5865246
300 2909045813 2909042592 Bacteria 6499737
301 2917558304 2917554339 Bacteria 4987857
302 8018154890 8018150411 Bacteria 5549903
303 Ga0265318_10075769
304 JGI24033J26618_1002129
305 JGI24751J29686_10000263
306 Ga0065715_10004261
307 Ga0070676_10191431
308 Ga0070683_100020374
309 Ga0070683_100435721
310 Ga0070670_100180386
311 Ga0070677_10182553
312 Ga0070687_100009952
313 Ga0070661_100016706
314 Ga0070668_100055693
315 Ga0070675_100032348
316 Ga0070713_100254581
317 Ga0070713_100357788
318 Ga0070710_10134038
319 Ga0070705_100471205
320 Ga0070700_100002257
321 Ga0070708_100010970
322 Ga0070708_100049874
323 Ga0070708_100241998
324 Ga0070663_100046125
325 Ga0070681_10070154
326 Ga0068867_100038594
327 Ga0068867_100221230
328 Ga0070707_100165969
329 Ga0070698_100163681
330 Ga0070698_100243924
331 Ga0070698_100621910
332 Ga0070699_100084796
333 Ga0070699_100450509
334 Ga0070679_100218886
335 Ga0070684_100005002
336 Ga0070697_100002322
337 Ga0070697_100168303
338 Ga0070697_100213774
339 Ga0070695_100002484
340 Ga0070696_100137292
341 Ga0070696_100279984
342 Ga0070665_100305256
343 Ga0070665_100702139
344 Ga0070664_100003486
345 Ga0068857_100159959
346 Ga0068859_100150942
347 Ga0068864_100045508
348 Ga0068870_10000341
349 Ga0068863_100002632
350 Ga0068863_100494881
351 Ga0068858_100062165
352 Ga0068860_100279608
353 Ga0068862_100049657
354 Ga0068862_100063028
355 Ga0081538_10025083
356 Ga0081540_1050068
357 Ga0070716_100036355
358 Ga0070712_100536229
359 Ga0075367_10225207
360 Ga0075430_100099165
361 Ga0075431_100001445
362 Ga0075431_100038265
363 Ga0075431_100627519
364 Ga0075433_10122458
365 Ga0075434_100300427
366 Ga0075434_100466171
367 Ga0075434_100546493
368 Ga0075429_100105660
369 Ga0075429_100173973
370 Ga0068865_100028038
371 Ga0068865_100047733
372 Ga0075436_100011810
373 Ga0075436_100178624
374 Ga0097620_100150941
375 Ga0075435_100014925
376 Ga0105251_10054772
377 Ga0105247_10002602
378 Ga0114129_10006974
379 Ga0114129_10163756
380 Ga0114129_10658005
381 Ga0105243_10097803
382 Ga0105243_10215775
383 Ga0105242_10319298
384 Ga0105249_10007708
385 Ga0105249_10158388
386 Ga0105249_10340030
387 Ga0105239_10129469
388 Ga0105239_10464282
389 Ga0105239_10540339
390 Ga0105239_10648316
391 Ga0105246_10014336
392 Ga0105246_10014433
393 Ga0157373_10059271
394 Ga0157375_10011932
395 Ga0163163_10034793
396 Ga0163163_10212996
397 Ga0157380_10161503
398 Ga0157380_10476105
399 Ga0157377_10011186
400 Ga0157379_10048594
401 Ga0157376_10051657
402 Ga0163161_10009615
403 Ga0206354_11124728
404 Ga0206353_10862499
405 Ga0207643_10003956
406 Ga0207705_10412123
407 Ga0207707_10086306
408 Ga0207695_10188898
409 Ga0207649_10026340
410 Ga0207652_10146959
411 Ga0207646_10083540
412 Ga0207646_10187014
413 Ga0207646_10480200
414 Ga0207650_10176554
415 Ga0207706_10180235
416 Ga0207704_10125712
417 Ga0207665_10106897
418 Ga0207661_10005378
419 Ga0207661_10016433
420 Ga0207679_10177227
421 Ga0207712_10186361
422 Ga0207668_10020539
423 Ga0207640_10428193
424 Ga0207658_10322592
425 Ga0207703_10130644
426 Ga0207678_10047076
427 Ga0207708_10003728
428 Ga0207708_10253513
429 Ga0207641_10007388
430 Ga0207648_10381357
431 Ga0207676_10130386
432 Ga0207674_10004066
433 Ga0207675_100058548
434 Ga0207683_10116618
435 Ga0207428_10032560
436 Ga0268265_10111183
437 Ga0268265_10129454
438 Ga0268265_10374701
439 Ga0265325_10112923
440 Ga0265340_10012137
441 Ga0265340_10013540
442 Ga0265340_10028233
443 Ga0265340_10138852
444 Ga0265339_10012261
445 Ga0265339_10015106
446 Ga0265339_10060364
447 Ga0265331_10017775
448 Ga0265316_10005374
449 Ga0265316_10019721
450 Ga0265313_10000884
451 Ga0265313_10005930
452 Ga0265313_10008452
453 Ga0265313_10010418
454 Ga0265313_10011125
455 Ga0265314_10017554
456 Ga0265314_10054902
457 Ga0265314_10058690
458 Ga0265342_10197695
459 Ga0316576_10181470
460 Ga0307409_100085760
461 Ga0373936_0096820
462 Ga0373939_0007389
463 Ga0373961_0051800
464 Ga0373933_0279835
465 Ga0373947_0008051
466 Ga0373937_0005945
467 Ga0373937_0072265
468 Ga0373937_0505922
469 Ga0373925_0058384
470 Ga0395899_0125123
471 Ga0395900_0105037
472 Ga0395898_0011073
473 Ga0395905_0003153
474 Ga0395905_0038618
475 Ga0395901_0419843
476 Ga0439466_0044580
477 Ga0451789_0806341
478 Ga0451800_0001038
479 Ga0451802_2098993
480 Ga0451804_0896768
481 Ga0451835_0547320
482 Ga0451839_0414527
483 Ga0451847_0716446
484 Ga0439448_0140322
485 Ga0466969_0104386
486 Ga0466971_0044698
487 Ga0466957_0062456
488 Ga0466959_0023617
489 Ga0466967_0069904
490 Ga0466967_0773692
491 Ga0495603_0000740
492 Ga0495629_0000841
493 Ga0495580_0004062
494 Ga0495582_0000461
495 Ga0495639_0003136
496 Ga0495594_0004429
497 Ga0495628_0351027
498 Ga0495630_0061892
499 Ga0495621_0020260
500 Ga0495634_0042228
501 Ga0495635_0138663
502 Ga0495588_0001977
503 Ga0495658_0018191
504 Ga0495613_0000595
505 Ga0495670_0201945
506 Ga0495589_0136902
507 Ga0495581_0011315
508 Ga0495593_0006408
509 Ga0495614_0003145
510 Ga0496102_0045463
511 Ga0496102_0064505
512 Ga0496104_0028197
513 Ga0496104_0593792
514 Ga0496105_0172284
515 Ga0496105_0178937
516 Ga0496105_0275084
517 Ga0496106_0014073
518 Ga0496106_0465529
519 Ga0496107_0013903
520 Ga0496107_0017189
521 Ga0496107_0044327
522 Ga0496108_0140998
523 Ga0496108_0210065
524 Ga0496109_0003866
525 Ga0496109_0450837
526 Ga0496110_0174362
527 Ga0496110_0189511
528 Ga0496110_0271409
529 Ga0496112_0079473
530 Ga0496112_0222473
531 Ga0496112_0267430
532 Ga0496113_0188883
533 Ga0496113_0192898
534 Ga0496114_0032206
535 Ga0496114_0076218
536 Ga0496114_0311738
537 Ga0501032_0182714
538 Ga0501033_0003446
539 Ga0501034_0043064
540 Ga0501034_0180251
541 Ga0501034_0210695
542 Ga0501034_0461080
543 Ga0501036_0009519
544 Ga0501036_0314522
545 Ga0501036_0588789
546 Ga0501037_0010827
547 Ga0501038_0021583
548 Ga0501038_0266031
549 Ga0501039_0140314
550 Ga0501042_0004481
551 Ga0501046_0082137
552 Ga0501047_0005515
553 Ga0501047_0160840
554 Ga0501048_0000273
555 Ga0501048_0098299
556 Ga0501067_0036746
557 Ga0501067_0047551
558 Ga0501069_0014353
559 Ga0501069_0144292
560 Ga0501070_0319411
561 Ga0501071_0008839
562 Ga0501072_0041568
563 Ga0501073_0034950
564 Ga0501074_0126264
565 Ga0501075_0008519
566 Ga0501076_0015924
567 Ga0501080_0128483
568 Ga0501080_0214542
569 Ga0501083_0002080
570 Ga0501083_0054750
571 Ga0501083_0287151
572 Ga0501035_0031992
573 Ga0501035_0060126
574 Ga0501044_0009378
575 Ga0501044_0082477
576 Ga0501044_0168839
577 Ga0501045_0012121
578 nmdc:mga05p37_11818_c1
579 nmdc:mga05p37_63064_c1
580 nmdc:mga05p37_673865_c1
581 nmdc:mga09592_16186_c1
582 nmdc:mga09592_50789_c1
583 nmdc:mga0qj67_135120_c1
584 nmdc:mga06r32_22935_c1
585 nmdc:mga06r32_64071_c1
586 nmdc:mga08y16_132366_c1
587 nmdc:mga0n895_482773_c1
588 nmdc:mga0rr50_484526_c1
589 nmdc:mga08x19_46654_c1
590 nmdc:mga0a205_155098_c1
591 nmdc:mga0a205_24382_c1
592 Ga0495612_0118457
593 Ga0495619_0017554
594 Ga0495619_0084235
595 Ga0501084_0014600
596 Ga0501082_0005743
597 Ga0501082_0033044
598 Ga0501082_0190837
599 Ga0530510_0000328
600 2883296495
601 2883359191
602 2909045813
603 2917558304
604 8018154890

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

70

251

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ja7-assembly1.cif.gz_A cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.6845 4 260
7mc0-assembly1.cif.gz_B inward facing conformation of the metni methionine abc transporter 0.6839 51 256
7cad-assembly1.cif.gz_A mycobacterium smegmatis sugabc complex 0.6771 3 255
8hps-assembly1.cif.gz_A lpqy-sugabc in state 5 0.6767 4 257
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.6744 59 256
ID Description Score Start End Superfamily
af_P0AFR9_7_261_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7748 8 256 1.10.3720.10
af_P0AFR9_7_261_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7561 8 256 1.10.3720.10
af_Q47539_71_268_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7494 60 254 1.10.3720.10
af_P0AFK6_8_259_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.744 13 257 1.10.3720.10
af_Q47539_71_268_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.724 60 254 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A5E4P2N7-F1-model_v4 Putative spermidine/putrescine transporter subunit permease component of ABC superfamily protein 0.8028 1 255 GO:0005886
GO:0055085
AF-A0A3D5DIM2-F1-model_v4 Spermidine/putrescine ABC transporter permease 0.7987 1 267 GO:0005886
GO:0055085
AF-A0A538KIU4-F1-model_v4 ABC transporter permease 0.7891 12 276 GO:0005886
GO:0055085
AF-A0A1Q7FY20-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.7886 7 268 GO:0005886
GO:0055085
AF-A0A5E4P2N7-F1-model_v4 Putative spermidine/putrescine transporter subunit permease component of ABC superfamily protein 0.7847 1 255 GO:0005886
GO:0055085

Map