F396518

General Info

Members Datasets Scaffolds Average Seq Length
302 188 302 507

Family's Representative Sequence

Representative Sequence 3300025903|Ga0207680_10019997|Ga0207680_100199973
Length 536
Sequence MLGSYTTQWLAGLACLKEPPMQNDPHKPGIFSRLPKPSLRQRRAAALGTAAAIVVVGLGAFALLPPVRAIQTAGTPTMLAANTNDSRAPRMLENSAPFSFADLVERVSPAVVTIKSNVPAPFRDFFNQFNNGQKPQGQPHRALSAGSGFIIDKAGYVVTNNHVVDASKKITVTLPDKREFIAKLVGTDPVTDVALLKITSDKPLPMVEFGDDKKLRVGDWVVAVGNPYGLSNSVTAGIVSSLGRNIESSQQYTNFIQIDAPINRGNSGGPTFDLRGQVIGMNSMIFSPSGGSIGIGFAIPASLIHDVVAQLKDHGRVTRGYLGVNIQPVTPDIAASLGIKEAKGALVAEVVAGGPAAKAGFEQGDIVTAINGQAVEDATDLTRKVANVPTGQTAIFSVARQGKPMQIKATIGTRPDAQQLASLAPGKDGMMAPSSANAAGLGLSSLTPESKKNFNIAENVVTGAVITKVDPDSDAADKGLQPGDVVLRVGSRIVRSPADFQVGVAEAKKGGRTNVLLLVAHSQGGTGFVAIDIDKT

Samples

Sample ID Description Type Environment
1 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
77 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
78 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
79 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
83 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
122 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
123 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
124 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
125 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
126 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
127 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
128 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
129 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
130 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
131 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
132 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
133 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
134 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
135 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
136 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
139 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
140 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
141 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
142 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
143 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
144 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
145 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
146 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
147 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
148 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
149 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
150 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
151 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
152 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
153 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
154 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
155 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
156 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
157 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
181 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
182 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
183 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
184 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
185 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
186 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
187 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
188 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 1.32
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.98
Nodule 0
Rhizoplane 0
Rhizosphere 92.38
Stem 0
Stem Tuber 0
Unclassified 4.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000017 3300003214 Bacteria 377013
2 JGI25153J46596_10000755 3300003215 Bacteria 19791
3 Ga0065712_10006838 3300005290 Bacteria 4488
4 Ga0070676_10042450 3300005328 Bacteria 2641
5 Ga0070690_100001403 3300005330 Bacteria 12571
6 Ga0068869_100023480 3300005334 Bacteria 4260
7 Ga0070666_10000613 3300005335 Bacteria 21473
8 Ga0068868_100098231 3300005338 Bacteria 2367
9 Ga0070689_100001529 3300005340 Bacteria 14743
10 Ga0070691_10001413 3300005341 Bacteria 10248
11 Ga0070661_100000160 3300005344 Bacteria 55287
12 Ga0070661_100036979 3300005344 Bacteria 3551
13 Ga0070675_100015300 3300005354 Bacteria 6063
14 Ga0070671_100017332 3300005355 Bacteria 5833
15 Ga0070673_100009578 3300005364 Bacteria 6510
16 Ga0070673_100117676 3300005364 Bacteria 2212
17 Ga0070688_100002907 3300005365 Bacteria 8736
18 Ga0070659_100012428 3300005366 Bacteria 6314
19 Ga0070667_100137107 3300005367 Bacteria 2140
20 Ga0070709_10001001 3300005434 Bacteria 15591
21 Ga0070713_100000262 3300005436 Bacteria 34628
22 Ga0070713_100080186 3300005436 Bacteria 2782
23 Ga0070701_10035336 3300005438 Bacteria 2510
24 Ga0070678_100014292 3300005456 Bacteria 5003
25 Ga0068867_100008785 3300005459 Bacteria 7134
26 Ga0070679_100038524 3300005530 Bacteria 4753
27 Ga0070679_100201290 3300005530 Bacteria 1957
28 Ga0070684_100003613 3300005535 Bacteria 11639
29 Ga0070684_100027108 3300005535 Bacteria 4832
30 Ga0068853_100031481 3300005539 Bacteria 4487
31 Ga0068853_100073784 3300005539 Bacteria 2976
32 Ga0070686_100012475 3300005544 Bacteria 4843
33 Ga0070695_100022696 3300005545 Bacteria 3851
34 Ga0070665_100001553 3300005548 Bacteria 26522
35 Ga0070665_100063785 3300005548 Bacteria 3694
36 Ga0070665_100117395 3300005548 Bacteria 2663
37 Ga0070665_100124874 3300005548 Bacteria 2576
38 Ga0068855_100177747 3300005563 Bacteria 2407
39 Ga0070664_100023890 3300005564 Bacteria 5050
40 Ga0068857_100010585 3300005577 Bacteria 8019
41 Ga0068857_100064627 3300005577 Bacteria 3253
42 Ga0068857_100078450 3300005577 Bacteria 2948
43 Ga0068857_100089060 3300005577 Bacteria 2761
44 Ga0068856_100003455 3300005614 Bacteria 15973
45 Ga0068856_100003973 3300005614 Bacteria 14814
46 Ga0068856_100117367 3300005614 Bacteria 2662
47 Ga0068856_100189967 3300005614 Bacteria 2068
48 Ga0068859_100059801 3300005617 Bacteria 3839
49 Ga0068864_100000364 3300005618 Bacteria 39580
50 Ga0068861_100001551 3300005719 Bacteria 14594
51 Ga0068870_10016316 3300005840 Bacteria 3545
52 Ga0068863_100006199 3300005841 Bacteria 11730
53 Ga0068858_100020527 3300005842 Bacteria 6174
54 Ga0068858_100026338 3300005842 Bacteria 5405
55 Ga0068858_100119636 3300005842 Bacteria 2462
56 Ga0068860_100120585 3300005843 Bacteria 2511
57 Ga0068862_100032457 3300005844 Bacteria 4412
58 Ga0068862_100050333 3300005844 Bacteria 3560
59 Ga0070712_100000171 3300006175 Bacteria 35631
60 Ga0070712_100000318 3300006175 Bacteria 27164
61 Ga0097621_100002762 3300006237 Bacteria 12003
62 Ga0097621_100067473 3300006237 Bacteria 2948
63 Ga0097621_100070293 3300006237 Bacteria 2891
64 Ga0097621_100089932 3300006237 Bacteria 2568
65 Ga0068871_100001266 3300006358 Bacteria 16909
66 Ga0068871_100038605 3300006358 Bacteria 3815
67 Ga0075428_100137794 3300006844 Bacteria 2653
68 Ga0075430_100078449 3300006846 Bacteria 2768
69 Ga0075431_100128839 3300006847 Bacteria 2611
70 Ga0075434_100097913 3300006871 Bacteria 2938
71 Ga0075436_100006571 3300006914 Bacteria 7962
72 Ga0097620_100059806 3300006931 Bacteria 3839
73 Ga0105240_10002102 3300009093 Bacteria 32589
74 Ga0105240_10024932 3300009093 Bacteria 7873
75 Ga0111539_10123819 3300009094 Bacteria 3030
76 Ga0105245_10032491 3300009098 Bacteria 4621
77 Ga0114129_10024343 3300009147 Bacteria 8578
78 Ga0105243_10176587 3300009148 Bacteria 1854
79 Ga0105241_10011011 3300009174 Bacteria 6633
80 Ga0105241_10031916 3300009174 Bacteria 3945
81 Ga0105241_10118132 3300009174 Bacteria 2132
82 Ga0105241_10196873 3300009174 Bacteria 1681
83 Ga0105242_10039020 3300009176 Bacteria 3822
84 Ga0105248_10000001 3300009177 Bacteria 1881304
85 Ga0105248_10027643 3300009177 Bacteria 6318
86 Ga0105248_10034144 3300009177 Bacteria 5686
87 Ga0105237_10083351 3300009545 Bacteria 3188
88 Ga0105238_10004371 3300009551 Bacteria 14022
89 Ga0105238_10038464 3300009551 Bacteria 4859
90 Ga0105249_10004119 3300009553 Bacteria 12553
91 Ga0105239_10035713 3300010375 Bacteria 5456
92 Ga0105239_10041156 3300010375 Bacteria 5064
93 Ga0105246_10048873 3300011119 Bacteria 2893
94 Ga0157373_10001939 3300013100 Bacteria 15716
95 Ga0157370_10047226 3300013104 Bacteria 4127
96 Ga0157369_10001941 3300013105 Bacteria 24894
97 Ga0157374_10054856 3300013296 Bacteria 3718
98 Ga0157378_10018098 3300013297 Bacteria 6187
99 Ga0157378_10033041 3300013297 Bacteria 4573
100 Ga0157378_10142849 3300013297 Bacteria 2224
101 Ga0163162_10011726 3300013306 Bacteria 8547
102 Ga0163162_10016280 3300013306 Bacteria 7269
103 Ga0163162_10171678 3300013306 Bacteria 2293
104 Ga0157372_10007777 3300013307 Bacteria 11386
105 Ga0157375_10005380 3300013308 Bacteria 11123
106 Ga0157375_10023268 3300013308 Bacteria 5714
107 Ga0163163_10000004 3300014325 Bacteria 416569
108 Ga0163163_10055724 3300014325 Bacteria 3907
109 Ga0157377_10017493 3300014745 Bacteria 3707
110 Ga0157379_10000489 3300014968 Bacteria 32177
111 Ga0157379_10007333 3300014968 Bacteria 9542
112 Ga0157379_10076185 3300014968 Bacteria 3004
113 Ga0157376_10013814 3300014969 Bacteria 6037
114 Ga0206356_10473298 3300020070 Bacteria 1684
115 Ga0206350_10898280 3300020080 Bacteria 1683
116 Ga0213874_10000374 3300021377 Bacteria 8851
117 Ga0213876_10009242 3300021384 Bacteria 5309
118 Ga0213876_10010467 3300021384 Bacteria 4974
119 Ga0213876_10026644 3300021384 Bacteria 3049
120 Ga0224712_10034984 3300022467 Bacteria 1851
121 Ga0224712_10038691 3300022467 Bacteria 1783
122 Ga0209026_1001462 3300025250 Bacteria 10431
123 Ga0209233_1000006 3300025261 Bacteria 1473685
124 Ga0209233_1001660 3300025261 Bacteria 8669
125 Ga0209758_1000008 3300025297 Bacteria 1215263
126 Ga0207688_10030054 3300025901 Bacteria 2995
127 Ga0207680_10019997 3300025903 Bacteria 3592
128 Ga0207699_10000246 3300025906 Bacteria 30425
129 Ga0207645_10037922 3300025907 Bacteria 3093
130 Ga0207643_10027979 3300025908 Bacteria 3128
131 Ga0207705_10006123 3300025909 Bacteria 8951
132 Ga0207707_10064528 3300025912 Bacteria 3188
133 Ga0207695_10004187 3300025913 Bacteria 19822
134 Ga0207695_10009053 3300025913 Bacteria 12373
135 Ga0207695_10024291 3300025913 Bacteria 6823
136 Ga0207695_10053382 3300025913 Bacteria 4228
137 Ga0207695_10118043 3300025913 Bacteria 2624
138 Ga0207671_10027715 3300025914 Bacteria 4235
139 Ga0207693_10000025 3300025915 Bacteria 124008
140 Ga0207693_10000556 3300025915 Bacteria 33738
141 Ga0207662_10019332 3300025918 Bacteria 3874
142 Ga0207657_10053441 3300025919 Bacteria 3499
143 Ga0207657_10094217 3300025919 Bacteria 2494
144 Ga0207649_10000029 3300025920 Bacteria 156557
145 Ga0207652_10108068 3300025921 Bacteria 2464
146 Ga0207694_10056488 3300025924 Bacteria 3049
147 Ga0207694_10063698 3300025924 Bacteria 2872
148 Ga0207650_10043614 3300025925 Bacteria 3293
149 Ga0207700_10000005 3300025928 Bacteria 394836
150 Ga0207644_10016892 3300025931 Bacteria 4917
151 Ga0207690_10011164 3300025932 Bacteria 5361
152 Ga0207706_10066175 3300025933 Bacteria 3181
153 Ga0207670_10041322 3300025936 Bacteria 3032
154 Ga0207711_10000001 3300025941 Bacteria 1325674
155 Ga0207711_10014887 3300025941 Bacteria 6461
156 Ga0207711_10015114 3300025941 Bacteria 6410
157 Ga0207689_10003215 3300025942 Bacteria 14965
158 Ga0207679_10019726 3300025945 Bacteria 4537
159 Ga0207667_10017998 3300025949 Bacteria 7935
160 Ga0207667_10024069 3300025949 Bacteria 6696
161 Ga0207667_10207526 3300025949 Bacteria 2008
162 Ga0207651_10001553 3300025960 Bacteria 10493
163 Ga0207658_10025943 3300025986 Bacteria 4105
164 Ga0207658_10054196 3300025986 Bacteria 2966
165 Ga0207658_10108702 3300025986 Bacteria 2188
166 Ga0207703_10009077 3300026035 Bacteria 7829
167 Ga0207703_10108585 3300026035 Bacteria 2364
168 Ga0207639_10063269 3300026041 Bacteria 2864
169 Ga0207708_10023533 3300026075 Bacteria 4658
170 Ga0207702_10000055 3300026078 Bacteria 136325
171 Ga0207702_10004324 3300026078 Bacteria 12670
172 Ga0207702_10086343 3300026078 Bacteria 2736
173 Ga0207641_10072851 3300026088 Bacteria 2959
174 Ga0207648_10002941 3300026089 Bacteria 18032
175 Ga0207648_10096864 3300026089 Bacteria 2582
176 Ga0207674_10000004 3300026116 Bacteria 241430
177 Ga0207674_10041526 3300026116 Bacteria 4756
178 Ga0207674_10046724 3300026116 Bacteria 4443
179 Ga0207674_10088776 3300026116 Bacteria 3084
180 Ga0207675_100006786 3300026118 Bacteria 10833
181 Ga0207683_10002290 3300026121 Bacteria 16792
182 Ga0207683_10017613 3300026121 Bacteria 6091
183 Ga0268266_10003220 3300028379 Bacteria 16493
184 Ga0268266_10013817 3300028379 Bacteria 6950
185 Ga0268265_10004554 3300028380 Bacteria 9587
186 Ga0268265_10022706 3300028380 Bacteria 4413
187 Ga0265318_10000017 3300028577 Bacteria 174748
188 Ga0265338_10050758 3300028800 Bacteria 3744
189 Ga0265338_10060999 3300028800 Bacteria 3308
190 Ga0265332_10020860 3300031238 Bacteria 2894
191 Ga0265320_10000155 3300031240 Bacteria 57130
192 Ga0265325_10000083 3300031241 Bacteria 66086
193 Ga0265325_10008423 3300031241 Bacteria 6088
194 Ga0265325_10013620 3300031241 Bacteria 4623
195 Ga0265329_10014126 3300031242 Bacteria 2824
196 Ga0265340_10000034 3300031247 Bacteria 65594
197 Ga0265339_10003079 3300031249 Bacteria 11739
198 Ga0265339_10006390 3300031249 Bacteria 7745
199 Ga0265331_10006422 3300031250 Bacteria 6948
200 Ga0265331_10056821 3300031250 Bacteria 1857
201 Ga0265316_10009159 3300031344 Bacteria 9122
202 Ga0265316_10031100 3300031344 Bacteria 4368
203 Ga0265313_10002103 3300031595 Bacteria 17759
204 Ga0265313_10002245 3300031595 Bacteria 16985
205 Ga0265314_10021420 3300031711 Bacteria 4970
206 Ga0265314_10028352 3300031711 Bacteria 4175
207 Ga0307516_10013763 3300031730 Bacteria 8592
208 Ga0373955_0004212 3300035172 Bacteria 6346
209 Ga0373931_0034701 3300035691 Bacteria 2619
210 Ga0373933_0012798 3300035724 Bacteria 4638
211 Ga0373937_0009966 3300036401 Bacteria 8286
212 Ga0395899_0025470 3300037312 Bacteria 4466
213 Ga0395899_0038658 3300037312 Bacteria 3574
214 Ga0395900_0006457 3300037418 Bacteria 12221
215 Ga0395900_0050791 3300037418 Bacteria 4271
216 Ga0395898_0067457 3300037466 Bacteria 3463
217 Ga0395898_0084374 3300037466 Bacteria 3062
218 Ga0395905_0033578 3300037471 Bacteria 4818
219 Ga0436365_1143171 3300039437 Bacteria 11960
220 Ga0436365_1245731 3300039437 Bacteria 2227
221 Ga0436365_1710520 3300039437 Bacteria 7603
222 Ga0436361_1025700 3300039447 Bacteria 6947
223 Ga0436363_1377394 3300039450 Bacteria 13484
224 Ga0436362_0067171 3300039453 Bacteria 2212
225 Ga0451576_0025485 3300045051 Bacteria 6370
226 Ga0495592_0065512 3300046454 Bacteria 2660
227 Ga0495651_0197706 3300046462 Bacteria 1410
228 Ga0495606_0095524 3300046507 Bacteria 1820
229 Ga0495609_0012814 3300046538 Bacteria 3971
230 Ga0495645_0023677 3300046543 Bacteria 4449
231 Ga0495622_0001189 3300046557 Bacteria 13441
232 Ga0495625_0137666 3300046660 Bacteria 1649
233 Ga0495623_0026933 3300046679 Bacteria 3699
234 Ga0495589_0062240 3300046794 Bacteria 1831
235 Ga0496120_0022539 3300048923 Bacteria 3960
236 Ga0496121_0002408 3300048924 Bacteria 28667
237 Ga0496126_0001787 3300048929 Bacteria 31720
238 Ga0496126_0138809 3300048929 Bacteria 2094
239 Ga0501032_0006360 3300049569 Bacteria 8705
240 Ga0501032_0042814 3300049569 Bacteria 3070
241 Ga0501033_0011803 3300049570 Bacteria 6678
242 Ga0501033_0012574 3300049570 Bacteria 6458
243 Ga0501033_0015937 3300049570 Bacteria 5694
244 Ga0501033_0018234 3300049570 Bacteria 5303
245 Ga0501033_0057972 3300049570 Bacteria 2861
246 Ga0501033_0080644 3300049570 Bacteria 2387
247 Ga0501033_0096333 3300049570 Bacteria 2162
248 Ga0501034_0004741 3300049571 Bacteria 15051
249 Ga0501034_0066177 3300049571 Bacteria 3627
250 Ga0501034_0082061 3300049571 Bacteria 3226
251 Ga0501036_0030029 3300049572 Bacteria 4593
252 Ga0501036_0031106 3300049572 Bacteria 4510
253 Ga0501037_0053342 3300049573 Bacteria 2957
254 Ga0501039_0001645 3300049575 Bacteria 16475
255 Ga0501042_0020108 3300049578 Bacteria 4643
256 Ga0501046_0003021 3300049580 Bacteria 15548
257 Ga0501046_0004030 3300049580 Bacteria 13407
258 Ga0501046_0153800 3300049580 Bacteria 1734
259 Ga0501047_0011469 3300049581 Bacteria 8386
260 Ga0501047_0016566 3300049581 Bacteria 7037
261 Ga0501047_0023382 3300049581 Bacteria 5933
262 Ga0501047_0025627 3300049581 Bacteria 5670
263 Ga0501047_0031889 3300049581 Bacteria 5085
264 Ga0501047_0121310 3300049581 Bacteria 2496
265 Ga0501047_0132835 3300049581 Bacteria 2369
266 Ga0501047_0238161 3300049581 Bacteria 1671
267 Ga0501048_0000472 3300049582 Bacteria 28173
268 Ga0501069_0002602 3300049585 Bacteria 9210
269 Ga0501070_0039272 3300049586 Bacteria 3949
270 Ga0501072_0046553 3300049588 Bacteria 3414
271 Ga0501073_0006549 3300049589 Bacteria 8666
272 Ga0501073_0064676 3300049589 Bacteria 2551
273 Ga0501074_0004387 3300049590 Bacteria 10082
274 Ga0501080_0018727 3300049742 Bacteria 6407
275 Ga0501083_0006138 3300049744 Bacteria 8522
276 Ga0501035_0008521 3300049822 Bacteria 9545
277 Ga0501035_0010265 3300049822 Bacteria 8688
278 Ga0501035_0027213 3300049822 Bacteria 5227
279 Ga0501035_0039809 3300049822 Bacteria 4252
280 Ga0501044_0001437 3300049823 Bacteria 27990
281 Ga0501044_0011919 3300049823 Bacteria 9420
282 Ga0501044_0020615 3300049823 Bacteria 7038
283 Ga0501044_0031529 3300049823 Bacteria 5578
284 Ga0501044_0035847 3300049823 Bacteria 5192
285 Ga0501044_0067842 3300049823 Bacteria 3634
286 Ga0501044_0259673 3300049823 Bacteria 1676
287 nmdc:mga05p37_8972_c1 3300050507 Bacteria 11828
288 nmdc:mga08y16_157392_c1 3300050511 Bacteria 2361
289 nmdc:mga0n895_65951_c1 3300050512 Bacteria 3584
290 nmdc:mga0n895_69940_c1 3300050512 Bacteria 3478
291 nmdc:mga0rr50_111429_c1 3300050513 Bacteria 2166
292 nmdc:mga08x19_111288_c1 3300050514 Bacteria 1827
293 nmdc:mga08x19_51_c1 3300050514 Bacteria 124093
294 nmdc:mga08x19_70424_c1 3300050514 Bacteria 2279
295 Ga0500643_000006 3300053087 Bacteria 479605
296 Ga0500555_009147 3300053103 Bacteria 2832
297 Ga0500595_005911 3300053119 Bacteria 5268
298 Ga0500573_0000006 3300053140 Bacteria 285988
299 Ga0501084_0001077 3300054114 Bacteria 21242
300 Ga0501084_0023850 3300054114 Bacteria 5103
301 Ga0501082_0003268 3300060353 Bacteria 14152
302 Ga0501082_0020853 3300060353 Bacteria 5653

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025250 Ga0209026_1001462 Ga0209026_10014625 346
2 3300039447 Ga0436361_1025700 Ga0436361_1025700_3535_4794 351
3 3300049823 Ga0501044_0259673 Ga0501044_0259673_47_1228 361
4 3300037471 Ga0395905_0033578 Ga0395905_0033578_1886_3352 411
5 3300049569 Ga0501032_0006360 Ga0501032_0006360_15_1310 414
6 3300049581 Ga0501047_0238161 Ga0501047_0238161_39_1403 429
7 3300046462 Ga0495651_0197706 Ga0495651_0197706_28_1383 431
8 3300046679 Ga0495623_0026933 Ga0495623_0026933_1549_3114 438
9 3300048923 Ga0496120_0022539 Ga0496120_0022539_575_1969 442
10 3300035172 Ga0373955_0004212 Ga0373955_0004212_3229_4794 443
11 3300035724 Ga0373933_0012798 Ga0373933_0012798_789_2354 443
12 3300021384 Ga0213876_10010467 Ga0213876_100104675 450
13 3300039437 Ga0436365_1710520 Ga0436365_1710520_1205_2662 450
14 3300048929 Ga0496126_0138809 Ga0496126_0138809_659_2071 450
15 3300006846 Ga0075430_100078449 Ga0075430_1000784492 452
16 3300006844 Ga0075428_100137794 Ga0075428_1001377942 456
17 3300006847 Ga0075431_100128839 Ga0075431_1001288392 456
18 3300009094 Ga0111539_10123819 Ga0111539_101238192 456
19 3300009147 Ga0114129_10024343 Ga0114129_100243434 456
20 3300050507 nmdc:mga05p37_8972_c1 nmdc:mga05p37_8972_c1_2223_3707 456
21 3300050511 nmdc:mga08y16_157392_c1 nmdc:mga08y16_157392_c1_453_1937 456
22 3300005290 Ga0065712_10006838 Ga0065712_100068381 458
23 3300005330 Ga0070690_100001403 Ga0070690_1000014032 458
24 3300005334 Ga0068869_100023480 Ga0068869_1000234804 458
25 3300005338 Ga0068868_100098231 Ga0068868_1000982312 458
26 3300005340 Ga0070689_100001529 Ga0070689_10000152912 458
27 3300005344 Ga0070661_100036979 Ga0070661_1000369794 458
28 3300005354 Ga0070675_100015300 Ga0070675_1000153002 458
29 3300005355 Ga0070671_100017332 Ga0070671_1000173324 458
30 3300005364 Ga0070673_100009578 Ga0070673_1000095784 458
31 3300005365 Ga0070688_100002907 Ga0070688_1000029075 458
32 3300005367 Ga0070667_100137107 Ga0070667_1001371072 458
33 3300005438 Ga0070701_10035336 Ga0070701_100353362 458
34 3300005456 Ga0070678_100014292 Ga0070678_1000142926 458
35 3300005535 Ga0070684_100003613 Ga0070684_10000361312 458
36 3300005544 Ga0070686_100012475 Ga0070686_1000124753 458
37 3300005548 Ga0070665_100124874 Ga0070665_1001248742 458
38 3300005564 Ga0070664_100023890 Ga0070664_1000238902 458
39 3300005577 Ga0068857_100064627 Ga0068857_1000646274 458
40 3300005617 Ga0068859_100059801 Ga0068859_1000598011 458
41 3300005618 Ga0068864_100000364 Ga0068864_10000036427 458
42 3300005719 Ga0068861_100001551 Ga0068861_10000155111 458
43 3300005840 Ga0068870_10016316 Ga0068870_100163161 458
44 3300005841 Ga0068863_100006199 Ga0068863_1000061992 458
45 3300005842 Ga0068858_100026338 Ga0068858_1000263382 458
46 3300005843 Ga0068860_100120585 Ga0068860_1001205852 458
47 3300005844 Ga0068862_100050333 Ga0068862_1000503332 458
48 3300006237 Ga0097621_100089932 Ga0097621_1000899322 458
49 3300006358 Ga0068871_100038605 Ga0068871_1000386054 458
50 3300006931 Ga0097620_100059806 Ga0097620_1000598064 458
51 3300009148 Ga0105243_10176587 Ga0105243_101765872 458
52 3300009177 Ga0105248_10034144 Ga0105248_100341446 458
53 3300009553 Ga0105249_10004119 Ga0105249_100041195 458
54 3300013297 Ga0157378_10033041 Ga0157378_100330412 458
55 3300013306 Ga0163162_10016280 Ga0163162_100162805 458
56 3300013308 Ga0157375_10005380 Ga0157375_1000538012 458
57 3300014325 Ga0163163_10055724 Ga0163163_100557241 458
58 3300014745 Ga0157377_10017493 Ga0157377_100174932 458
59 3300025901 Ga0207688_10030054 Ga0207688_100300543 458
60 3300025908 Ga0207643_10027979 Ga0207643_100279793 458
61 3300025918 Ga0207662_10019332 Ga0207662_100193324 458
62 3300025925 Ga0207650_10043614 Ga0207650_100436142 458
63 3300025931 Ga0207644_10016892 Ga0207644_100168925 458
64 3300025941 Ga0207711_10014887 Ga0207711_100148873 458
65 3300025942 Ga0207689_10003215 Ga0207689_100032153 458
66 3300025945 Ga0207679_10019726 Ga0207679_100197266 458
67 3300025960 Ga0207651_10001553 Ga0207651_100015539 458
68 3300026075 Ga0207708_10023533 Ga0207708_100235334 458
69 3300026089 Ga0207648_10002941 Ga0207648_1000294113 458
70 3300026116 Ga0207674_10046724 Ga0207674_100467244 458
71 3300026118 Ga0207675_100006786 Ga0207675_1000067863 458
72 3300026121 Ga0207683_10017613 Ga0207683_100176136 458
73 3300028380 Ga0268265_10004554 Ga0268265_100045543 458
74 3300045051 Ga0451576_0025485 Ga0451576_0025485_1610_3112 458
75 3300037312 Ga0395899_0025470 Ga0395899_0025470_1922_3415 461
76 3300037418 Ga0395900_0050791 Ga0395900_0050791_2222_3715 461
77 3300037466 Ga0395898_0067457 Ga0395898_0067457_1062_2555 461
78 3300031241 Ga0265325_10000083 Ga0265325_100000835 464
79 3300031249 Ga0265339_10006390 Ga0265339_100063904 464
80 3300031344 Ga0265316_10009159 Ga0265316_100091595 464
81 3300031595 Ga0265313_10002245 Ga0265313_1000224511 464
82 3300025919 Ga0207657_10094217 Ga0207657_100942172 466
83 3300021384 Ga0213876_10026644 Ga0213876_100266442 469
84 3300039437 Ga0436365_1143171 Ga0436365_1143171_9759_11339 469
85 3300025949 Ga0207667_10207526 Ga0207667_102075261 470
86 3300028800 Ga0265338_10050758 Ga0265338_100507583 470
87 3300005335 Ga0070666_10000613 Ga0070666_1000061311 471
88 3300025986 Ga0207658_10054196 Ga0207658_100541962 471
89 3300031242 Ga0265329_10014126 Ga0265329_100141262 471
90 3300046454 Ga0495592_0065512 Ga0495592_0065512_240_1757 471
91 3300046543 Ga0495645_0023677 Ga0495645_0023677_2502_4019 471
92 3300048929 Ga0496126_0001787 Ga0496126_0001787_15083_16657 471
93 3300049571 Ga0501034_0082061 Ga0501034_0082061_767_2332 473
94 3300049586 Ga0501070_0039272 Ga0501070_0039272_28_1617 474
95 3300005844 Ga0068862_100032457 Ga0068862_1000324573 475
96 3300028380 Ga0268265_10022706 Ga0268265_100227062 475
97 3300046660 Ga0495625_0137666 Ga0495625_0137666_62_1639 475
98 3300053087 Ga0500643_000006 Ga0500643_000006_408008_409585 475
99 3300054114 Ga0501084_0023850 Ga0501084_0023850_708_2273 476
100 3300060353 Ga0501082_0020853 Ga0501082_0020853_1566_3131 476
101 3300005341 Ga0070691_10001413 Ga0070691_100014138 477
102 3300005545 Ga0070695_100022696 Ga0070695_1000226963 477
103 3300005577 Ga0068857_100010585 Ga0068857_1000105853 477
104 3300005614 Ga0068856_100003973 Ga0068856_1000039732 477
105 3300006914 Ga0075436_100006571 Ga0075436_1000065718 477
106 3300009093 Ga0105240_10002102 Ga0105240_1000210216 477
107 3300009551 Ga0105238_10004371 Ga0105238_1000437111 477
108 3300010375 Ga0105239_10041156 Ga0105239_100411564 477
109 3300013100 Ga0157373_10001939 Ga0157373_100019393 477
110 3300013105 Ga0157369_10001941 Ga0157369_100019413 477
111 3300013307 Ga0157372_10007777 Ga0157372_100077774 477
112 3300022467 Ga0224712_10034984 Ga0224712_100349841 477
113 3300025913 Ga0207695_10009053 Ga0207695_100090534 477
114 3300025924 Ga0207694_10063698 Ga0207694_100636983 477
115 3300025949 Ga0207667_10024069 Ga0207667_100240694 477
116 3300026078 Ga0207702_10004324 Ga0207702_100043248 477
117 3300026116 Ga0207674_10000004 Ga0207674_10000004190 477
118 3300031249 Ga0265339_10003079 Ga0265339_100030799 477
119 3300050514 nmdc:mga08x19_70424_c1 nmdc:mga08x19_70424_c1_490_2055 477
120 3300031247 Ga0265340_10000034 Ga0265340_100000349 478
121 3300031344 Ga0265316_10031100 Ga0265316_100311002 478
122 3300005434 Ga0070709_10001001 Ga0070709_100010012 479
123 3300005436 Ga0070713_100000262 Ga0070713_10000026220 479
124 3300005614 Ga0068856_100003455 Ga0068856_1000034552 479
125 3300006175 Ga0070712_100000171 Ga0070712_10000017112 479
126 3300025906 Ga0207699_10000246 Ga0207699_100002464 479
127 3300025915 Ga0207693_10000556 Ga0207693_1000055622 479
128 3300025928 Ga0207700_10000005 Ga0207700_10000005421 479
129 3300026078 Ga0207702_10000055 Ga0207702_1000005512 479
130 3300035691 Ga0373931_0034701 Ga0373931_0034701_372_1937 479
131 3300036401 Ga0373937_0009966 Ga0373937_0009966_1691_3295 479
132 3300050512 nmdc:mga0n895_69940_c1 nmdc:mga0n895_69940_c1_1123_2688 479
133 3300050513 nmdc:mga0rr50_111429_c1 nmdc:mga0rr50_111429_c1_385_1950 479
134 3300050514 nmdc:mga08x19_51_c1 nmdc:mga08x19_51_c1_25506_27071 479
135 3300031250 Ga0265331_10006422 Ga0265331_100064223 480
136 3300031595 Ga0265313_10002103 Ga0265313_100021038 480
137 3300005344 Ga0070661_100000160 Ga0070661_10000016024 481
138 3300005436 Ga0070713_100080186 Ga0070713_1000801863 481
139 3300005614 Ga0068856_100189967 Ga0068856_1001899671 481
140 3300006175 Ga0070712_100000318 Ga0070712_10000031817 481
141 3300025915 Ga0207693_10000025 Ga0207693_1000002534 481
142 3300025920 Ga0207649_10000029 Ga0207649_1000002970 481
143 3300031711 Ga0265314_10028352 Ga0265314_100283523 481
144 3300049580 Ga0501046_0003021 Ga0501046_0003021_1085_2656 484
145 3300009174 Ga0105241_10011011 Ga0105241_100110113 485
146 3300026116 Ga0207674_10041526 Ga0207674_100415263 485
147 3300049581 Ga0501047_0023382 Ga0501047_0023382_4337_5908 485
148 3300049589 Ga0501073_0064676 Ga0501073_0064676_45_1616 485
149 3300049823 Ga0501044_0035847 Ga0501044_0035847_437_2008 485
150 3300009093 Ga0105240_10024932 Ga0105240_100249324 486
151 3300009177 Ga0105248_10000001 Ga0105248_10000001971 486
152 3300025941 Ga0207711_10000001 Ga0207711_10000001900 486
153 3300028577 Ga0265318_10000017 Ga0265318_1000001780 486
154 3300028800 Ga0265338_10060999 Ga0265338_100609992 486
155 3300031241 Ga0265325_10013620 Ga0265325_100136203 486
156 3300049742 Ga0501080_0018727 Ga0501080_0018727_4105_5667 486
157 3300006237 Ga0097621_100067473 Ga0097621_1000674732 487
158 3300009174 Ga0105241_10118132 Ga0105241_101181322 487
159 3300013297 Ga0157378_10018098 Ga0157378_100180984 487
160 3300009545 Ga0105237_10083351 Ga0105237_100833512 488
161 3300020070 Ga0206356_10473298 Ga0206356_104732981 488
162 3300020080 Ga0206350_10898280 Ga0206350_108982801 488
163 3300021377 Ga0213874_10000374 Ga0213874_100003743 488
164 3300021384 Ga0213876_10009242 Ga0213876_100092425 488
165 3300039437 Ga0436365_1245731 Ga0436365_1245731_596_2185 488
166 3300039450 Ga0436363_1377394 Ga0436363_1377394_5309_6874 488
167 3300039453 Ga0436362_0067171 Ga0436362_0067171_255_1844 488
168 3300005842 Ga0068858_100020527 Ga0068858_1000205273 490
169 3300009174 Ga0105241_10031916 Ga0105241_100319163 490
170 3300014968 Ga0157379_10000489 Ga0157379_1000048912 490
171 3300026035 Ga0207703_10009077 Ga0207703_100090773 490
172 3300031240 Ga0265320_10000155 Ga0265320_100001558 490
173 3300006871 Ga0075434_100097913 Ga0075434_1000979131 491
174 3300050512 nmdc:mga0n895_65951_c1 nmdc:mga0n895_65951_c1_89_1651 491
175 3300050514 nmdc:mga08x19_111288_c1 nmdc:mga08x19_111288_c1_32_1594 491
176 3300005563 Ga0068855_100177747 Ga0068855_1001777472 493
177 3300031711 Ga0265314_10021420 Ga0265314_100214203 493
178 3300049823 Ga0501044_0020615 Ga0501044_0020615_2417_3997 494
179 3300025913 Ga0207695_10024291 Ga0207695_100242915 495
180 3300025924 Ga0207694_10056488 Ga0207694_100564882 495
181 3300028379 Ga0268266_10013817 Ga0268266_100138171 495
182 3300049570 Ga0501033_0057972 Ga0501033_0057972_1067_2632 495
183 3300049571 Ga0501034_0066177 Ga0501034_0066177_880_2442 495
184 3300025919 Ga0207657_10053441 Ga0207657_100534412 496
185 3300009098 Ga0105245_10032491 Ga0105245_100324914 497
186 3300010375 Ga0105239_10035713 Ga0105239_100357134 497
187 3300025913 Ga0207695_10004187 Ga0207695_100041873 497
188 3300025913 Ga0207695_10053382 Ga0207695_100533824 497
189 3300025914 Ga0207671_10027715 Ga0207671_100277153 497
190 3300031241 Ga0265325_10008423 Ga0265325_100084234 497
191 3300049822 Ga0501035_0010265 Ga0501035_0010265_3363_4940 497
192 3300026035 Ga0207703_10108585 Ga0207703_101085852 498
193 3300048924 Ga0496121_0002408 Ga0496121_0002408_2251_3822 498
194 3300049569 Ga0501032_0042814 Ga0501032_0042814_441_2018 498
195 3300049570 Ga0501033_0015937 Ga0501033_0015937_2375_3952 498
196 3300049572 Ga0501036_0030029 Ga0501036_0030029_2573_4150 498
197 3300049581 Ga0501047_0031889 Ga0501047_0031889_1543_3120 498
198 3300049822 Ga0501035_0008521 Ga0501035_0008521_6947_8521 498
199 3300049823 Ga0501044_0031529 Ga0501044_0031529_211_1788 498
200 3300005548 Ga0070665_100063785 Ga0070665_1000637853 503
201 3300005577 Ga0068857_100089060 Ga0068857_1000890603 503
202 3300009174 Ga0105241_10196873 Ga0105241_101968731 503
203 3300009177 Ga0105248_10027643 Ga0105248_100276432 503
204 3300009551 Ga0105238_10038464 Ga0105238_100384643 503
205 3300025941 Ga0207711_10015114 Ga0207711_100151142 503
206 3300025986 Ga0207658_10108702 Ga0207658_101087022 503
207 3300026088 Ga0207641_10072851 Ga0207641_100728513 503
208 3300046538 Ga0495609_0012814 Ga0495609_0012814_1568_3142 503
209 3300053140 Ga0500573_0000006 Ga0500573_0000006_255915_257483 503
210 3300005614 Ga0068856_100117367 Ga0068856_1001173672 504
211 3300025933 Ga0207706_10066175 Ga0207706_100661752 504
212 3300026078 Ga0207702_10086343 Ga0207702_100863432 504
213 3300049570 Ga0501033_0096333 Ga0501033_0096333_143_1729 505
214 3300049581 Ga0501047_0016566 Ga0501047_0016566_5328_6914 505
215 3300049823 Ga0501044_0067842 Ga0501044_0067842_1639_3225 505
216 3300053119 Ga0500595_005911 Ga0500595_005911_2905_4497 505
217 3300005366 Ga0070659_100012428 Ga0070659_1000124284 506
218 3300025932 Ga0207690_10011164 Ga0207690_100111643 506
219 3300025949 Ga0207667_10017998 Ga0207667_100179984 506
220 3300049570 Ga0501033_0011803 Ga0501033_0011803_2296_3876 506
221 3300049570 Ga0501033_0018234 Ga0501033_0018234_1496_3079 506
222 3300049571 Ga0501034_0004741 Ga0501034_0004741_11214_12794 506
223 3300049572 Ga0501036_0031106 Ga0501036_0031106_150_1730 506
224 3300049575 Ga0501039_0001645 Ga0501039_0001645_9733_11313 506
225 3300049578 Ga0501042_0020108 Ga0501042_0020108_921_2501 506
226 3300049580 Ga0501046_0004030 Ga0501046_0004030_4238_5818 506
227 3300049580 Ga0501046_0153800 Ga0501046_0153800_57_1640 506
228 3300049581 Ga0501047_0011469 Ga0501047_0011469_4511_6091 506
229 3300049581 Ga0501047_0121310 Ga0501047_0121310_219_1802 506
230 3300049581 Ga0501047_0132835 Ga0501047_0132835_145_1728 506
231 3300049582 Ga0501048_0000472 Ga0501048_0000472_17894_19474 506
232 3300049585 Ga0501069_0002602 Ga0501069_0002602_7555_9135 506
233 3300049588 Ga0501072_0046553 Ga0501072_0046553_1779_3359 506
234 3300049589 Ga0501073_0006549 Ga0501073_0006549_1034_2614 506
235 3300049590 Ga0501074_0004387 Ga0501074_0004387_1034_2614 506
236 3300049744 Ga0501083_0006138 Ga0501083_0006138_2427_4007 506
237 3300049823 Ga0501044_0011919 Ga0501044_0011919_2294_3874 506
238 3300054114 Ga0501084_0001077 Ga0501084_0001077_1060_2640 506
239 3300060353 Ga0501082_0003268 Ga0501082_0003268_1034_2614 506
240 3300031730 Ga0307516_10013763 Ga0307516_100137636 507
241 3300003215 JGI25153J46596_10000755 JGI25153J46596_1000075516 508
242 3300005530 Ga0070679_100038524 Ga0070679_1000385244 508
243 3300005539 Ga0068853_100073784 Ga0068853_1000737843 508
244 3300005548 Ga0070665_100117395 Ga0070665_1001173952 508
245 3300013104 Ga0157370_10047226 Ga0157370_100472262 508
246 3300025297 Ga0209758_1000008 Ga0209758_1000008762 508
247 3300025903 Ga0207680_10019997 Ga0207680_100199973 508
248 3300025913 Ga0207695_10118043 Ga0207695_101180432 508
249 3300025921 Ga0207652_10108068 Ga0207652_101080682 508
250 3300046557 Ga0495622_0001189 Ga0495622_0001189_812_2395 508
251 3300049570 Ga0501033_0012574 Ga0501033_0012574_3954_5558 508
252 3300049570 Ga0501033_0080644 Ga0501033_0080644_567_2159 508
253 3300049573 Ga0501037_0053342 Ga0501037_0053342_1110_2714 508
254 3300049581 Ga0501047_0025627 Ga0501047_0025627_3309_4913 508
255 3300049822 Ga0501035_0027213 Ga0501035_0027213_3091_4683 508
256 3300049822 Ga0501035_0039809 Ga0501035_0039809_816_2420 508
257 3300049823 Ga0501044_0001437 Ga0501044_0001437_25979_27583 508
258 3300005530 Ga0070679_100201290 Ga0070679_1002012901 509
259 3300005539 Ga0068853_100031481 Ga0068853_1000314812 509
260 3300005548 Ga0070665_100001553 Ga0070665_10000155318 509
261 3300006237 Ga0097621_100070293 Ga0097621_1000702932 509
262 3300013306 Ga0163162_10171678 Ga0163162_101716782 509
263 3300014325 Ga0163163_10000004 Ga0163163_10000004316 509
264 3300014968 Ga0157379_10007333 Ga0157379_100073332 509
265 3300022467 Ga0224712_10038691 Ga0224712_100386911 509
266 3300025909 Ga0207705_10006123 Ga0207705_100061234 509
267 3300025912 Ga0207707_10064528 Ga0207707_100645283 509
268 3300026041 Ga0207639_10063269 Ga0207639_100632692 509
269 3300028379 Ga0268266_10003220 Ga0268266_100032203 509
270 3300037312 Ga0395899_0038658 Ga0395899_0038658_1256_2839 509
271 3300037418 Ga0395900_0006457 Ga0395900_0006457_1998_3581 509
272 3300037466 Ga0395898_0084374 Ga0395898_0084374_625_2208 509
273 3300005328 Ga0070676_10042450 Ga0070676_100424502 510
274 3300005364 Ga0070673_100117676 Ga0070673_1001176761 510
275 3300005459 Ga0068867_100008785 Ga0068867_1000087853 510
276 3300005577 Ga0068857_100078450 Ga0068857_1000784502 510
277 3300006237 Ga0097621_100002762 Ga0097621_1000027627 510
278 3300006358 Ga0068871_100001266 Ga0068871_1000012667 510
279 3300025907 Ga0207645_10037922 Ga0207645_100379223 510
280 3300026116 Ga0207674_10088776 Ga0207674_100887763 510
281 3300031238 Ga0265332_10020860 Ga0265332_100208601 510
282 3300031250 Ga0265331_10056821 Ga0265331_100568212 510
283 3300053103 Ga0500555_009147 Ga0500555_009147_100_1752 510
284 3300009176 Ga0105242_10039020 Ga0105242_100390202 511
285 3300013308 Ga0157375_10023268 Ga0157375_100232682 511
286 3300014968 Ga0157379_10076185 Ga0157379_100761853 511
287 3300014969 Ga0157376_10013814 Ga0157376_100138142 511
288 3300025936 Ga0207670_10041322 Ga0207670_100413222 511
289 3300026089 Ga0207648_10096864 Ga0207648_100968642 511
290 3300026121 Ga0207683_10002290 Ga0207683_100022903 511
291 3300046794 Ga0495589_0062240 Ga0495589_0062240_100_1695 511
292 3300003214 JGI25165J46597_1000017 JGI25165J46597_100001783 513
293 3300005535 Ga0070684_100027108 Ga0070684_1000271083 513
294 3300005842 Ga0068858_100119636 Ga0068858_1001196362 513
295 3300011119 Ga0105246_10048873 Ga0105246_100488733 513
296 3300013296 Ga0157374_10054856 Ga0157374_100548563 513
297 3300013297 Ga0157378_10142849 Ga0157378_101428492 513
298 3300013306 Ga0163162_10011726 Ga0163162_100117262 513
299 3300025261 Ga0209233_1000006 Ga0209233_1000006257 513
300 3300025261 Ga0209233_1001660 Ga0209233_10016602 513
301 3300025986 Ga0207658_10025943 Ga0207658_100259432 513
302 3300046507 Ga0495606_0095524 Ga0495606_0095524_85_1692 513

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13365

Trypsin_2

Trypsin-like peptidase domain

146

281

0.98

PF13180

PDZ_2

PDZ domain

320

411

0.95

PF00595

PDZ

PDZ domain

310

398

0.9

PF17820

PDZ_6

PDZ domain

346

400

0.85

PF00089

Trypsin

Trypsin

129

308

0.78

PF00595

PDZ

PDZ domain

438

520

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lgw-assembly1.cif.gz_A h198p/t167v double mutant of degs-deltapdz protease 0.9414 122 294
6z0y-assembly2.cif.gz_B htra1 inactive protease domain s328a with carasil mutations d174r r274q 0.9399 125 289
3lgt-assembly1.cif.gz_A y162a/h198p double mutant of degs-deltapdz protease 0.9392 122 293
3nwu-assembly1.cif.gz_C substrate induced remodeling of the active site regulates htra1 activity 0.9388 125 282
2qf3-assembly1.cif.gz_C structure of the delta pdz truncation of the degs protease 0.9383 125 288
ID Description Score Start End Superfamily
2r3uA01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9861 123 184 2.40.10.10
2r3yB01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9815 123 187 2.40.10.10
6ieoA01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9577 125 177 2.40.10.10
3pv4A01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9462 125 184 2.40.10.10
af_A0A0N7KSP8_147_285_2.40.10.120 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.9379 123 212 2.40.10.120
ID Description Score Start End GO Terms
AF-A0A1Q3IWW3-F1-model_v4 PDZ domain-containing protein 0.9408 294 389
AF-A0A0S8H8S4-F1-model_v4 PDZ domain-containing protein 0.9349 295 391
AF-A0A7C5ERY8-F1-model_v4 Trypsin-like serine protease 0.9333 125 290 GO:0004252
GO:0006508
AF-A0A5Q4E703-F1-model_v4 PDZ domain-containing protein 0.9272 294 397 GO:0052689
AF-A0A3B0W9G0-F1-model_v4 Protease 0.9227 295 392 GO:0006508
GO:0008233

Feature Viewer

pLDDT pTM Quality
69.68 0.54 Medium
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Predicted Structure (AlphaFold2)

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