F396382

General Info

Members Datasets Scaffolds Average Seq Length
302 179 604 303

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100143623|Ga0070665_1001436232
Length 322
Sequence MPVPAVNPMSLQTLDGRRITIVEVGPRDGLQNEHASITTADKIELVNRLSAAGLPVIEVSAFVSPKWVPQMADAAAVFGGITRRDGTRYTALVPNVAGLERAVEARVAEVAIFAAATETFSRRNTNRSIQESLDDYRLVCDRAARLGVRVRGYLSTAFGCPYEGDVSPEAAAEVAARLIGLGVFEVAVSDTIGIAHPGQVAQVLEAVLARIRVDQVALHFHDTRGTALANVLAALPYGVSTFDASAGGLGGCPYAPGAAGNLATDDLVYMLNGLGATTGVSLEALSDASAFIASRLDHPLPSRFAQSVAARKRALEAARGSS

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
109 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
110 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
111 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
112 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
113 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
114 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
115 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
116 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
119 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
120 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
121 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
122 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
123 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
124 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
127 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
128 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
129 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
130 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
133 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
134 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
135 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
136 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
137 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
138 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
143 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
144 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
145 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
146 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
175 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
179 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.67
Metatranscriptomes 0
Isolates 0.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.31
Rhizosphere 96.03
Stem 0
Stem Tuber 0
Unclassified 3.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100143623 3300005548 Bacteria 2390
2 JGI24751J29686_10009417 3300002459 Unclassified 2007
3 JGI24751J29686_10009469 3300002459 Unclassified 2003
4 JGI24751J29686_10009506 3300002459 Unclassified 2000
5 Ga0065712_10075719 3300005290 Bacteria 3777
6 Ga0065715_10142168 3300005293 Bacteria 1837
7 Ga0070670_100002316 3300005331 Bacteria 15704
8 Ga0070666_10076820 3300005335 Bacteria 2279
9 Ga0070691_10004306 3300005341 Bacteria 6466
10 Ga0070661_100147641 3300005344 Bacteria 1776
11 Ga0070669_100023767 3300005353 Bacteria 4392
12 Ga0070675_100040887 3300005354 Bacteria 3787
13 Ga0070675_100103249 3300005354 Bacteria 2403
14 Ga0070675_100207069 3300005354 Bacteria 1704
15 Ga0070674_100009006 3300005356 Bacteria 5966
16 Ga0070673_100430324 3300005364 Bacteria 1184
17 Ga0070688_100101189 3300005365 Bacteria 1900
18 Ga0070659_100205075 3300005366 Bacteria 1624
19 Ga0070659_100341810 3300005366 Bacteria 1254
20 Ga0070667_100194347 3300005367 Bacteria 1798
21 Ga0070667_100450559 3300005367 Bacteria 1176
22 Ga0070709_10023370 3300005434 Bacteria 3628
23 Ga0070714_100056978 3300005435 Bacteria 3343
24 Ga0070713_100126819 3300005436 Bacteria 2246
25 Ga0070711_100205843 3300005439 Bacteria 1521
26 Ga0070694_100008914 3300005444 Bacteria 6145
27 Ga0070681_10019433 3300005458 Bacteria 6800
28 Ga0070681_10085603 3300005458 Bacteria 3104
29 Ga0070681_10314606 3300005458 Bacteria 1475
30 Ga0068867_100459539 3300005459 Bacteria 1087
31 Ga0070698_100060489 3300005471 Bacteria 3823
32 Ga0070698_100297560 3300005471 Bacteria 1544
33 Ga0070699_100001294 3300005518 Bacteria 23090
34 Ga0070679_100441897 3300005530 Bacteria 1245
35 Ga0070697_100196371 3300005536 Bacteria 1714
36 Ga0070672_100014823 3300005543 Bacteria 5532
37 Ga0070686_100122602 3300005544 Bacteria 1787
38 Ga0070686_100348335 3300005544 Unclassified 1112
39 Ga0070695_100051604 3300005545 Bacteria 2640
40 Ga0070696_100013581 3300005546 Bacteria 5466
41 Ga0070665_100004563 3300005548 Bacteria 14512
42 Ga0070665_100024681 3300005548 Bacteria 6057
43 Ga0070704_100194381 3300005549 Bacteria 1633
44 Ga0070664_100155977 3300005564 Bacteria 2017
45 Ga0068857_100008286 3300005577 Bacteria 8981
46 Ga0068859_100245377 3300005617 Bacteria 1880
47 Ga0068859_100318534 3300005617 Bacteria 1649
48 Ga0068859_100564868 3300005617 Bacteria 1232
49 Ga0068859_100869732 3300005617 Bacteria 987
50 Ga0068864_100032536 3300005618 Bacteria 4432
51 Ga0068866_10272781 3300005718 Bacteria 1045
52 Ga0068861_100113426 3300005719 Bacteria 2174
53 Ga0068861_100634279 3300005719 Bacteria 985
54 Ga0068863_100013180 3300005841 Bacteria 7976
55 Ga0068863_100135994 3300005841 Bacteria 2348
56 Ga0068863_100495577 3300005841 Bacteria 1203
57 Ga0068858_100031242 3300005842 Bacteria 4945
58 Ga0068858_100061558 3300005842 Bacteria 3470
59 Ga0068858_100079064 3300005842 Bacteria 3056
60 Ga0068858_100081177 3300005842 Bacteria 3014
61 Ga0068858_100106281 3300005842 Bacteria 2620
62 Ga0068858_100110493 3300005842 Bacteria 2567
63 Ga0068858_100469525 3300005842 Bacteria 1214
64 Ga0068858_100497287 3300005842 Bacteria 1178
65 Ga0068860_100107659 3300005843 Bacteria 2664
66 Ga0068860_100424976 3300005843 Bacteria 1318
67 Ga0068862_100146580 3300005844 Bacteria 2098
68 Ga0068862_100149037 3300005844 Bacteria 2081
69 Ga0068862_100190873 3300005844 Bacteria 1843
70 Ga0081455_10032141 3300005937 Bacteria 4735
71 Ga0081539_10030146 3300005985 Bacteria 3373
72 Ga0070716_100218351 3300006173 Bacteria 1279
73 Ga0097621_100023653 3300006237 Bacteria 4786
74 Ga0097621_100135319 3300006237 Bacteria 2101
75 Ga0068871_100038145 3300006358 Bacteria 3835
76 Ga0068871_100205122 3300006358 Bacteria 1703
77 Ga0075428_100374429 3300006844 Bacteria 1527
78 Ga0075431_100204503 3300006847 Bacteria 2019
79 Ga0075433_10033049 3300006852 Bacteria 4434
80 Ga0075434_100000237 3300006871 Bacteria 38182
81 Ga0075434_100064082 3300006871 Bacteria 3659
82 Ga0075434_100223823 3300006871 Bacteria 1901
83 Ga0068865_100032757 3300006881 Bacteria 3475
84 Ga0068865_100099495 3300006881 Bacteria 2126
85 Ga0075436_100000078 3300006914 Bacteria 55590
86 Ga0075436_100009968 3300006914 Bacteria 6501
87 Ga0075436_100026954 3300006914 Bacteria 3958
88 Ga0075436_100058057 3300006914 Bacteria 2672
89 Ga0097620_100245377 3300006931 Bacteria 1880
90 Ga0097620_100318526 3300006931 Bacteria 1649
91 Ga0097620_100564876 3300006931 Bacteria 1232
92 Ga0097620_100869705 3300006931 Bacteria 987
93 Ga0075435_100000018 3300007076 Bacteria 97506
94 Ga0075435_100002960 3300007076 Bacteria 11422
95 Ga0075435_100193504 3300007076 Bacteria 1722
96 Ga0075435_100206089 3300007076 Bacteria 1667
97 Ga0111539_10005467 3300009094 Bacteria 16437
98 Ga0111539_10008554 3300009094 Bacteria 12995
99 Ga0111539_10009091 3300009094 Bacteria 12578
100 Ga0105245_10116641 3300009098 Bacteria 2490
101 Ga0105245_10348705 3300009098 Bacteria 1466
102 Ga0105247_10031680 3300009101 Bacteria 3210
103 Ga0114129_10011485 3300009147 Bacteria 12609
104 Ga0114129_10011838 3300009147 Bacteria 12409
105 Ga0114129_10014445 3300009147 Bacteria 11253
106 Ga0114129_10027270 3300009147 Bacteria 8086
107 Ga0114129_10046897 3300009147 Bacteria 6073
108 Ga0114129_10195229 3300009147 Bacteria 2745
109 Ga0114129_10260298 3300009147 Bacteria 2325
110 Ga0114129_10292344 3300009147 Bacteria 2174
111 Ga0114129_10821528 3300009147 Bacteria 1184
112 Ga0114129_10879110 3300009147 Bacteria 1137
113 Ga0105243_10004797 3300009148 Bacteria 10628
114 Ga0105242_10023245 3300009176 Bacteria 4887
115 Ga0105242_10052100 3300009176 Bacteria 3338
116 Ga0105248_10048211 3300009177 Bacteria 4778
117 Ga0105248_10064150 3300009177 Bacteria 4124
118 Ga0105248_10082083 3300009177 Bacteria 3624
119 Ga0105248_10096051 3300009177 Bacteria 3338
120 Ga0105248_10099042 3300009177 Bacteria 3285
121 Ga0105248_10127759 3300009177 Bacteria 2868
122 Ga0105248_10167581 3300009177 Bacteria 2476
123 Ga0105248_10195523 3300009177 Bacteria 2279
124 Ga0105248_10201678 3300009177 Bacteria 2241
125 Ga0105248_10331437 3300009177 Bacteria 1714
126 Ga0105248_10588230 3300009177 Bacteria 1256
127 Ga0105238_10420159 3300009551 Bacteria 1332
128 Ga0157370_10258578 3300013104 Bacteria 1609
129 Ga0163162_10064789 3300013306 Bacteria 3700
130 Ga0163162_10107492 3300013306 Bacteria 2885
131 Ga0157375_10057577 3300013308 Bacteria 3842
132 Ga0157375_10414560 3300013308 Bacteria 1513
133 Ga0163163_10004080 3300014325 Bacteria 12453
134 Ga0163163_10040648 3300014325 Bacteria 4542
135 Ga0163163_10378362 3300014325 Bacteria 1473
136 Ga0157380_10028987 3300014326 Bacteria 4228
137 Ga0157377_10036784 3300014745 Bacteria 2695
138 Ga0157379_10154594 3300014968 Bacteria 2069
139 Ga0157376_10004492 3300014969 Bacteria 9720
140 Ga0157376_10024251 3300014969 Bacteria 4759
141 Ga0157376_10042822 3300014969 Bacteria 3712
142 Ga0207710_10016287 3300025900 Bacteria 3144
143 Ga0207680_10038176 3300025903 Bacteria 2779
144 Ga0207680_10265365 3300025903 Bacteria 1189
145 Ga0207699_10013605 3300025906 Bacteria 4171
146 Ga0207699_10052000 3300025906 Bacteria 2423
147 Ga0207699_10258588 3300025906 Bacteria 1202
148 Ga0207684_10508215 3300025910 Bacteria 1033
149 Ga0207707_10168205 3300025912 Bacteria 1915
150 Ga0207663_10215073 3300025916 Bacteria 1395
151 Ga0207660_10060521 3300025917 Bacteria 2723
152 Ga0207662_10299936 3300025918 Bacteria 1068
153 Ga0207681_10351162 3300025923 Bacteria 1180
154 Ga0207694_10296358 3300025924 Bacteria 1331
155 Ga0207650_10090003 3300025925 Bacteria 2343
156 Ga0207650_10234976 3300025925 Bacteria 1480
157 Ga0207650_10452186 3300025925 Bacteria 1069
158 Ga0207659_10007917 3300025926 Bacteria 6570
159 Ga0207687_10078069 3300025927 Bacteria 2383
160 Ga0207664_10221931 3300025929 Bacteria 1639
161 Ga0207644_10275208 3300025931 Bacteria 1350
162 Ga0207690_10167473 3300025932 Bacteria 1643
163 Ga0207686_10050895 3300025934 Bacteria 2578
164 Ga0207686_10090021 3300025934 Bacteria 2024
165 Ga0207670_10200276 3300025936 Bacteria 1517
166 Ga0207704_10046404 3300025938 Bacteria 2589
167 Ga0207711_10004819 3300025941 Bacteria 11464
168 Ga0207711_10028281 3300025941 Bacteria 4716
169 Ga0207711_10059012 3300025941 Bacteria 3303
170 Ga0207711_10063988 3300025941 Bacteria 3176
171 Ga0207679_10145981 3300025945 Bacteria 1919
172 Ga0207679_10516848 3300025945 Bacteria 1067
173 Ga0207651_10204643 3300025960 Bacteria 1584
174 Ga0207668_10527781 3300025972 Bacteria 1019
175 Ga0207703_10022235 3300026035 Bacteria 4972
176 Ga0207703_10096763 3300026035 Bacteria 2493
177 Ga0207703_10137762 3300026035 Bacteria 2115
178 Ga0207703_10371681 3300026035 Bacteria 1321
179 Ga0207703_10448924 3300026035 Bacteria 1204
180 Ga0207708_10371384 3300026075 Bacteria 1178
181 Ga0207641_10000982 3300026088 Bacteria 29176
182 Ga0207648_10437043 3300026089 Bacteria 1190
183 Ga0207648_10546859 3300026089 Bacteria 1063
184 Ga0207676_10084667 3300026095 Unclassified 2585
185 Ga0207674_10015392 3300026116 Bacteria 8403
186 Ga0207674_10045115 3300026116 Bacteria 4536
187 Ga0207675_100020361 3300026118 Bacteria 6184
188 Ga0207675_100155775 3300026118 Bacteria 2177
189 Ga0207683_10056520 3300026121 Bacteria 3443
190 Ga0207428_10010474 3300027907 Bacteria 8277
191 Ga0207428_10064173 3300027907 Bacteria 2900
192 Ga0268266_10006622 3300028379 Bacteria 10576
193 Ga0268266_10317394 3300028379 Bacteria 1457
194 Ga0268266_10429787 3300028379 Bacteria 1253
195 Ga0268265_10111386 3300028380 Bacteria 2235
196 Ga0268265_10179436 3300028380 Bacteria 1818
197 Ga0268264_10195748 3300028381 Bacteria 1845
198 Ga0268264_10313599 3300028381 Bacteria 1481
199 Ga0265330_10110439 3300031235 Bacteria 1175
200 Ga0307416_100061467 3300032002 Bacteria 3066
201 Ga0373934_0030999 3300035086 Unclassified 2093
202 Ga0373940_0004459 3300035088 Bacteria 2960
203 Ga0373944_0022780 3300035089 Bacteria 1823
204 Ga0373949_0013268 3300035090 Bacteria 1825
205 Ga0373936_0029830 3300035113 Bacteria 2149
206 Ga0373939_0001782 3300035114 Bacteria 5183
207 Ga0373941_0000058 3300035115 Bacteria 17110
208 Ga0373956_0058004 3300035119 Unclassified 1750
209 Ga0373943_0017686 3300035170 Bacteria 3264
210 Ga0373955_0101036 3300035172 Bacteria 1656
211 Ga0373942_0001811 3300035207 Bacteria 5403
212 Ga0373961_0002004 3300035241 Bacteria 5466
213 Ga0373962_0002662 3300035242 Bacteria 4245
214 Ga0373962_0043471 3300035242 Bacteria 1274
215 Ga0373924_0000892 3300035410 Bacteria 9414
216 Ga0373931_0206411 3300035691 Bacteria 1176
217 Ga0373933_0174797 3300035724 Bacteria 1368
218 Ga0373947_0044611 3300035725 Bacteria 2651
219 Ga0373937_0039782 3300036401 Bacteria 4285
220 Ga0373937_0184480 3300036401 Bacteria 1960
221 Ga0373925_0218326 3300037068 Bacteria 1521
222 Ga0436360_1282181 3300039438 Bacteria 12068
223 Ga0436361_0430826 3300039447 Bacteria 7116
224 Ga0436363_0477764 3300039450 Unclassified 1306
225 Ga0436362_0579771 3300039453 Bacteria 5937
226 Ga0451576_0021009 3300045051 Bacteria 7102
227 Ga0495592_0032510 3300046454 Bacteria 3936
228 Ga0495592_0219041 3300046454 Bacteria 1274
229 Ga0495603_0079636 3300046455 Bacteria 1920
230 Ga0495629_0125900 3300046459 Bacteria 1785
231 Ga0495608_0001571 3300046511 Bacteria 16323
232 Ga0495608_0103853 3300046511 Bacteria 1831
233 Ga0495628_0135335 3300046516 Unclassified 1883
234 Ga0495630_0001513 3300046517 Bacteria 16086
235 Ga0495645_0002346 3300046543 Bacteria 12846
236 Ga0495645_0007508 3300046543 Bacteria 7589
237 Ga0495635_0256661 3300046663 Bacteria 1178
238 Ga0495657_0060545 3300046675 Bacteria 2508
239 Ga0495599_0165531 3300046678 Bacteria 1366
240 Ga0495647_0023754 3300046681 Bacteria 2226
241 Ga0495658_0032127 3300046683 Bacteria 2865
242 Ga0495658_0039667 3300046683 Bacteria 2614
243 Ga0495669_0003725 3300046684 Bacteria 6273
244 Ga0495613_0000883 3300046689 Bacteria 23073
245 Ga0495600_0267423 3300046809 Bacteria 1085
246 Ga0495674_0013719 3300047319 Bacteria 7610
247 Ga0495674_0236569 3300047319 Bacteria 1506
248 Ga0495684_0000214 3300047471 Bacteria 45082
249 Ga0495684_0090627 3300047471 Bacteria 2316
250 Ga0496104_0031012 3300048907 Bacteria 4970
251 Ga0496104_0168703 3300048907 Bacteria 2099
252 Ga0496108_0007819 3300048911 Bacteria 8664
253 Ga0496111_0169746 3300048914 Bacteria 1621
254 Ga0496112_0002605 3300048915 Bacteria 14562
255 Ga0496112_0082345 3300048915 Bacteria 3183
256 Ga0496113_0242021 3300048916 Bacteria 1440
257 Ga0496114_0135074 3300048917 Bacteria 2133
258 Ga0496114_0225118 3300048917 Bacteria 1647
259 Ga0496115_0127854 3300048918 Bacteria 2094
260 Ga0501039_0164211 3300049575 Bacteria 1746
261 Ga0501040_0254294 3300049576 Bacteria 1253
262 Ga0501041_0124728 3300049577 Bacteria 1602
263 Ga0501042_0071782 3300049578 Bacteria 2477
264 Ga0501069_0295748 3300049585 Bacteria 949
265 Ga0501071_0003675 3300049587 Bacteria 9623
266 Ga0501075_0003595 3300049591 Bacteria 10391
267 Ga0501081_0015926 3300049743 Bacteria 4964
268 Ga0501045_0002536 3300049824 Bacteria 12439
269 nmdc:mga05p37_23611_c1 3300050507 Bacteria 7464
270 nmdc:mga05p37_25807_c1 3300050507 Bacteria 7145
271 nmdc:mga05p37_50834_c1 3300050507 Bacteria 5097
272 nmdc:mga05p37_63436_c1 3300050507 Bacteria 4547
273 nmdc:mga09592_373752_c1 3300050508 Bacteria 1233
274 nmdc:mga06r32_208501_c1 3300050510 Bacteria 1942
275 nmdc:mga06r32_26677_c1 3300050510 Bacteria 5389
276 nmdc:mga08y16_36372_c1 3300050511 Bacteria 5171
277 nmdc:mga08y16_367134_c1 3300050511 Bacteria 1477
278 nmdc:mga08y16_38600_c1 3300050511 Bacteria 5014
279 nmdc:mga08y16_57582_c1 3300050511 Bacteria 4061
280 nmdc:mga08y16_734755_c1 3300050511 Bacteria 984
281 nmdc:mga0n895_120253_c1 3300050512 Bacteria 2648
282 nmdc:mga0n895_24_c1 3300050512 Bacteria 92082
283 nmdc:mga0n895_265170_c1 3300050512 Bacteria 1743
284 nmdc:mga0n895_279102_c1 3300050512 Bacteria 1694
285 nmdc:mga0rr50_528_c1 3300050513 Bacteria 20402
286 nmdc:mga0rr50_5_c1 3300050513 Bacteria 327169
287 nmdc:mga08x19_104463_c1 3300050514 Bacteria 1883
288 nmdc:mga08x19_14845_c1 3300050514 Bacteria 4730
289 nmdc:mga08x19_77_c1 3300050514 Bacteria 91801
290 nmdc:mga0a205_229882_c1 3300050515 Bacteria 1738
291 nmdc:mga0a205_254457_c1 3300050515 Bacteria 1635
292 nmdc:mga0a205_359510_c1 3300050515 Bacteria 1323
293 nmdc:mga0a205_81017_c1 3300050515 Bacteria 3136
294 Ga0495601_0040156 3300053077 Bacteria 2931
295 Ga0495601_0189040 3300053077 Bacteria 1346
296 Ga0495595_0088816 3300053084 Bacteria 1481
297 Ga0495619_0015314 3300053085 Bacteria 4850
298 Ga0495619_0220434 3300053085 Unclassified 1314
299 Ga0501084_0016068 3300054114 Bacteria 6213
300 Ga0501082_0028474 3300060353 Bacteria 4813
301 Ga0530510_0002739 3300061734 Bacteria 12111
302 3003670895 3003665799 Bacteria 7279786
303 Ga0070665_100143623
304 JGI24751J29686_10009417
305 JGI24751J29686_10009469
306 JGI24751J29686_10009506
307 Ga0065712_10075719
308 Ga0065715_10142168
309 Ga0070670_100002316
310 Ga0070666_10076820
311 Ga0070691_10004306
312 Ga0070661_100147641
313 Ga0070669_100023767
314 Ga0070675_100040887
315 Ga0070675_100103249
316 Ga0070675_100207069
317 Ga0070674_100009006
318 Ga0070673_100430324
319 Ga0070688_100101189
320 Ga0070659_100205075
321 Ga0070659_100341810
322 Ga0070667_100194347
323 Ga0070667_100450559
324 Ga0070709_10023370
325 Ga0070714_100056978
326 Ga0070713_100126819
327 Ga0070711_100205843
328 Ga0070694_100008914
329 Ga0070681_10019433
330 Ga0070681_10085603
331 Ga0070681_10314606
332 Ga0068867_100459539
333 Ga0070698_100060489
334 Ga0070698_100297560
335 Ga0070699_100001294
336 Ga0070679_100441897
337 Ga0070697_100196371
338 Ga0070672_100014823
339 Ga0070686_100122602
340 Ga0070686_100348335
341 Ga0070695_100051604
342 Ga0070696_100013581
343 Ga0070665_100004563
344 Ga0070665_100024681
345 Ga0070704_100194381
346 Ga0070664_100155977
347 Ga0068857_100008286
348 Ga0068859_100245377
349 Ga0068859_100318534
350 Ga0068859_100564868
351 Ga0068859_100869732
352 Ga0068864_100032536
353 Ga0068866_10272781
354 Ga0068861_100113426
355 Ga0068861_100634279
356 Ga0068863_100013180
357 Ga0068863_100135994
358 Ga0068863_100495577
359 Ga0068858_100031242
360 Ga0068858_100061558
361 Ga0068858_100079064
362 Ga0068858_100081177
363 Ga0068858_100106281
364 Ga0068858_100110493
365 Ga0068858_100469525
366 Ga0068858_100497287
367 Ga0068860_100107659
368 Ga0068860_100424976
369 Ga0068862_100146580
370 Ga0068862_100149037
371 Ga0068862_100190873
372 Ga0081455_10032141
373 Ga0081539_10030146
374 Ga0070716_100218351
375 Ga0097621_100023653
376 Ga0097621_100135319
377 Ga0068871_100038145
378 Ga0068871_100205122
379 Ga0075428_100374429
380 Ga0075431_100204503
381 Ga0075433_10033049
382 Ga0075434_100000237
383 Ga0075434_100064082
384 Ga0075434_100223823
385 Ga0068865_100032757
386 Ga0068865_100099495
387 Ga0075436_100000078
388 Ga0075436_100009968
389 Ga0075436_100026954
390 Ga0075436_100058057
391 Ga0097620_100245377
392 Ga0097620_100318526
393 Ga0097620_100564876
394 Ga0097620_100869705
395 Ga0075435_100000018
396 Ga0075435_100002960
397 Ga0075435_100193504
398 Ga0075435_100206089
399 Ga0111539_10005467
400 Ga0111539_10008554
401 Ga0111539_10009091
402 Ga0105245_10116641
403 Ga0105245_10348705
404 Ga0105247_10031680
405 Ga0114129_10011485
406 Ga0114129_10011838
407 Ga0114129_10014445
408 Ga0114129_10027270
409 Ga0114129_10046897
410 Ga0114129_10195229
411 Ga0114129_10260298
412 Ga0114129_10292344
413 Ga0114129_10821528
414 Ga0114129_10879110
415 Ga0105243_10004797
416 Ga0105242_10023245
417 Ga0105242_10052100
418 Ga0105248_10048211
419 Ga0105248_10064150
420 Ga0105248_10082083
421 Ga0105248_10096051
422 Ga0105248_10099042
423 Ga0105248_10127759
424 Ga0105248_10167581
425 Ga0105248_10195523
426 Ga0105248_10201678
427 Ga0105248_10331437
428 Ga0105248_10588230
429 Ga0105238_10420159
430 Ga0157370_10258578
431 Ga0163162_10064789
432 Ga0163162_10107492
433 Ga0157375_10057577
434 Ga0157375_10414560
435 Ga0163163_10004080
436 Ga0163163_10040648
437 Ga0163163_10378362
438 Ga0157380_10028987
439 Ga0157377_10036784
440 Ga0157379_10154594
441 Ga0157376_10004492
442 Ga0157376_10024251
443 Ga0157376_10042822
444 Ga0207710_10016287
445 Ga0207680_10038176
446 Ga0207680_10265365
447 Ga0207699_10013605
448 Ga0207699_10052000
449 Ga0207699_10258588
450 Ga0207684_10508215
451 Ga0207707_10168205
452 Ga0207663_10215073
453 Ga0207660_10060521
454 Ga0207662_10299936
455 Ga0207681_10351162
456 Ga0207694_10296358
457 Ga0207650_10090003
458 Ga0207650_10234976
459 Ga0207650_10452186
460 Ga0207659_10007917
461 Ga0207687_10078069
462 Ga0207664_10221931
463 Ga0207644_10275208
464 Ga0207690_10167473
465 Ga0207686_10050895
466 Ga0207686_10090021
467 Ga0207670_10200276
468 Ga0207704_10046404
469 Ga0207711_10004819
470 Ga0207711_10028281
471 Ga0207711_10059012
472 Ga0207711_10063988
473 Ga0207679_10145981
474 Ga0207679_10516848
475 Ga0207651_10204643
476 Ga0207668_10527781
477 Ga0207703_10022235
478 Ga0207703_10096763
479 Ga0207703_10137762
480 Ga0207703_10371681
481 Ga0207703_10448924
482 Ga0207708_10371384
483 Ga0207641_10000982
484 Ga0207648_10437043
485 Ga0207648_10546859
486 Ga0207676_10084667
487 Ga0207674_10015392
488 Ga0207674_10045115
489 Ga0207675_100020361
490 Ga0207675_100155775
491 Ga0207683_10056520
492 Ga0207428_10010474
493 Ga0207428_10064173
494 Ga0268266_10006622
495 Ga0268266_10317394
496 Ga0268266_10429787
497 Ga0268265_10111386
498 Ga0268265_10179436
499 Ga0268264_10195748
500 Ga0268264_10313599
501 Ga0265330_10110439
502 Ga0307416_100061467
503 Ga0373934_0030999
504 Ga0373940_0004459
505 Ga0373944_0022780
506 Ga0373949_0013268
507 Ga0373936_0029830
508 Ga0373939_0001782
509 Ga0373941_0000058
510 Ga0373956_0058004
511 Ga0373943_0017686
512 Ga0373955_0101036
513 Ga0373942_0001811
514 Ga0373961_0002004
515 Ga0373962_0002662
516 Ga0373962_0043471
517 Ga0373924_0000892
518 Ga0373931_0206411
519 Ga0373933_0174797
520 Ga0373947_0044611
521 Ga0373937_0039782
522 Ga0373937_0184480
523 Ga0373925_0218326
524 Ga0436360_1282181
525 Ga0436361_0430826
526 Ga0436363_0477764
527 Ga0436362_0579771
528 Ga0451576_0021009
529 Ga0495592_0032510
530 Ga0495592_0219041
531 Ga0495603_0079636
532 Ga0495629_0125900
533 Ga0495608_0001571
534 Ga0495608_0103853
535 Ga0495628_0135335
536 Ga0495630_0001513
537 Ga0495645_0002346
538 Ga0495645_0007508
539 Ga0495635_0256661
540 Ga0495657_0060545
541 Ga0495599_0165531
542 Ga0495647_0023754
543 Ga0495658_0032127
544 Ga0495658_0039667
545 Ga0495669_0003725
546 Ga0495613_0000883
547 Ga0495600_0267423
548 Ga0495674_0013719
549 Ga0495674_0236569
550 Ga0495684_0000214
551 Ga0495684_0090627
552 Ga0496104_0031012
553 Ga0496104_0168703
554 Ga0496108_0007819
555 Ga0496111_0169746
556 Ga0496112_0002605
557 Ga0496112_0082345
558 Ga0496113_0242021
559 Ga0496114_0135074
560 Ga0496114_0225118
561 Ga0496115_0127854
562 Ga0501039_0164211
563 Ga0501040_0254294
564 Ga0501041_0124728
565 Ga0501042_0071782
566 Ga0501069_0295748
567 Ga0501071_0003675
568 Ga0501075_0003595
569 Ga0501081_0015926
570 Ga0501045_0002536
571 nmdc:mga05p37_23611_c1
572 nmdc:mga05p37_25807_c1
573 nmdc:mga05p37_50834_c1
574 nmdc:mga05p37_63436_c1
575 nmdc:mga09592_373752_c1
576 nmdc:mga06r32_208501_c1
577 nmdc:mga06r32_26677_c1
578 nmdc:mga08y16_36372_c1
579 nmdc:mga08y16_367134_c1
580 nmdc:mga08y16_38600_c1
581 nmdc:mga08y16_57582_c1
582 nmdc:mga08y16_734755_c1
583 nmdc:mga0n895_120253_c1
584 nmdc:mga0n895_24_c1
585 nmdc:mga0n895_265170_c1
586 nmdc:mga0n895_279102_c1
587 nmdc:mga0rr50_528_c1
588 nmdc:mga0rr50_5_c1
589 nmdc:mga08x19_104463_c1
590 nmdc:mga08x19_14845_c1
591 nmdc:mga08x19_77_c1
592 nmdc:mga0a205_229882_c1
593 nmdc:mga0a205_254457_c1
594 nmdc:mga0a205_359510_c1
595 nmdc:mga0a205_81017_c1
596 Ga0495601_0040156
597 Ga0495601_0189040
598 Ga0495595_0088816
599 Ga0495619_0015314
600 Ga0495619_0220434
601 Ga0501084_0016068
602 Ga0501082_0028474
603 Ga0530510_0002739
604 3003670895

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00682

HMGL-like

HMGL-like

18

292

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cw6-assembly3.cif.gz_F crystal structure of human hmg-coa lyase: insights into catalysis and the molecular basis for hydroxymethylglutaric aciduria 0.9865 7 299
1ydn-assembly4.cif.gz_D crystal structure of the hmg-coa lyase from brucella melitensis, northeast structural genomics target lr35. 0.9863 8 290
3mp5-assembly2.cif.gz_C crystal structure of human lyase r41m in complex with hmg-coa 0.9863 7 299
1ydo-assembly1.cif.gz_A crystal structure of the bacillis subtilis hmg-coa lyase, northeast structural genomics target sr181. 0.9859 7 301
3mp3-assembly2.cif.gz_D crystal structure of human lyase in complex with inhibitor hg-coa 0.9856 7 300
ID Description Score Start End Superfamily
1ydoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9848 7 301 3.20.20.70
af_Q0JNR8_151_451_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9824 5 303 3.20.20.70
1ydoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9748 7 301 3.20.20.70
af_Q0JNR8_151_451_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9728 5 303 3.20.20.70
af_Q4DFZ0_10_135_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9312 11 128 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A3N5YTU8-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9966 14 225 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A7S2C770-F1-model_v4 hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.9959 12 189 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-W5P8W1-F1-model_v4 hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.9955 11 227 GO:0004419
GO:0005783
GO:0005829
GO:0006552
GO:0046872
GO:0046951
AF-A0A0D2VKT3-F1-model_v4 hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.9954 11 190 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-R4UW91-F1-model_v4 hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.9954 11 171 GO:0004419
GO:0006552
GO:0046872
GO:0046951

Map