F395960

General Info

Members Datasets Scaffolds Average Seq Length
301 235 246 661

Family's Representative Sequence

Representative Sequence 3300025940|Ga0207691_10025653|Ga0207691_100256536
Length 664
Sequence MRLLGKLDWSAVPLDQPIPLIASAVAGGVVVGVLAYVWFKGWWPYLWNEWLTSVDHKRIGVMYIILAALMLLRGFADAIMMRSQQALALHGAQGYLPPEHYDQVFSAHGTIMIFFGAMPFVIPLQLGVRDVAFPTLNNTGFWLTATGALLVNISLAVGEFARTGWLPYPPLSELAYSPGVGVDYYLWALQISGVGTLTTGINLVTTILKMRAPGMSYLRMPMFCWTSLASNLLIVAAFPILTATLAMLTLDRYMGFHFFTNEAGGNPMMFVNLIWAWGHPEVYILILPAFGIFSEVFSTFSAKPLFGYRSMVMATLFICVVSFLVWLHHFFTMGAGGDVNAAFGIATSIIAVGTGVKIYNWLFTMYGGRVRFEVPMLWALGFVITFVIGGMTGVLLAVPPADFVLHNSMFLVAHFHNVIIGGVLFGAFAGYEYWFPKAFGFRLHKGWGVTAFWLTLTGFIATFMPLYIVGMEGMTRRLQHIDNPLWDPWILMAGGGTVVIFLGVAAQIVQLVVSIRMREQLRDLTGDPWNGRTLEWVTPSPPPTFNFPVLHDVHGEDAYWGMKQAAIAQERLYEEPDYKPIEMPKNNATGFVCGFFATIMGFSLIWHIWWLVILGFIGAYATFVLFAWRDEDEYEIPAEEVARIDRARRASRGPEWLAAMESQA

Samples

Sample ID Description Type Environment
1 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
2 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
3 2512875024 Mesorhizobium loti R88b Isolate Nodule
4 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
5 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
6 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
7 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
8 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
9 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
10 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
11 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
12 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
13 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
14 2643221585 Pelomonas sp. Root662 Isolate Unclassified
15 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
16 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
17 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
18 2643221638 Duganella sp. Root336D2 Isolate Unclassified
19 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
20 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
21 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
22 2643221656 Pelomonas sp. Root405 Isolate Unclassified
23 2643221683 Variovorax sp. Root473 Isolate Unclassified
24 2738541277 Variovorax sp. GV051 Isolate Unclassified
25 2738543019 Variovorax sp. GV040 Isolate Unclassified
26 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
27 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
28 2842677519 Variovorax sp. R-72495 Isolate Unclassified
29 2842711865 Duganella sp. R-73148 Isolate Unclassified
30 2842733646 Variovorax sp. R-72446 Isolate Unclassified
31 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
32 2857553236 Duganella sp. R-74557 Isolate Unclassified
33 2857558681 Duganella sp. R-74565 Isolate Unclassified
34 2857564685 Duganella sp. R-74599 Isolate Unclassified
35 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
36 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
37 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
38 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
39 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
40 2904424332 Duganella sp. 1411 Isolate Rhizosphere
41 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
42 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
43 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
44 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
45 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
46 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
47 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
48 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
49 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
50 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
51 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
52 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
53 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
54 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
55 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
56 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
57 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
58 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
59 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
60 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
61 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
62 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
63 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
64 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
65 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
66 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
67 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
68 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
69 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
70 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
71 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
72 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
73 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
74 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
75 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
76 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
77 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
78 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
79 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
80 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
81 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
82 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
83 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
84 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
85 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
86 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
87 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
88 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
89 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
90 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
91 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
92 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
93 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
94 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
95 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
96 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
97 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
98 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
99 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
100 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
101 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
102 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
105 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
106 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
107 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
109 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
110 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
111 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
113 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
116 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
117 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
118 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
120 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
121 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
146 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
150 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
151 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
152 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
153 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
154 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
155 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
156 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
157 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
158 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
159 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
160 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
161 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
162 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
163 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
164 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
165 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
166 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
167 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
168 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
169 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
170 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
171 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
172 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
173 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
174 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
175 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
176 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
177 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
178 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
179 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
180 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
181 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
182 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
183 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
184 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
185 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
186 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
187 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
188 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
189 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
190 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
191 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
192 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
193 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
194 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
195 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
196 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
197 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
198 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
199 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
200 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
201 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
202 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
203 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
204 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
205 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
206 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
207 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
208 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
209 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
210 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
211 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
212 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
213 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
214 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
215 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
216 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
217 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
218 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
220 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
221 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
222 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
223 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
224 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
225 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
226 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
227 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
228 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
229 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
230 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
231 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
232 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
233 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
234 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
235 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 81.06
Metatranscriptomes 0.66
Isolates 18.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.94
Nodule 4.98
Rhizoplane 1.99
Rhizosphere 58.14
Stem 0
Stem Tuber 0
Unclassified 16.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1001873 3300002738 Bacteria 6401
2 JGI25157J39369_1000623 3300002741 Bacteria 20017
3 Ga0007410J51695_1014726 3300003574 Bacteria 4447
4 Ga0007409J51694_1008758 3300003575 Bacteria 3822
5 Ga0055532_1000102 3300003758 Bacteria 91562
6 Ga0055535_1003225 3300003761 Bacteria 4798
7 Ga0055526_1000001 3300003771 Bacteria 669703
8 Ga0055526_1003976 3300003771 Bacteria 9107
9 Ga0055534_1001141 3300003784 Bacteria 11259
10 Ga0055534_1002008 3300003784 Bacteria 7403
11 Ga0055534_1008638 3300003784 Bacteria 2289
12 Ga0055528_1009580 3300003790 Bacteria 4031
13 Ga0055530_10003264 3300003791 Bacteria 9434
14 Ga0055530_10008869 3300003791 Bacteria 3958
15 Ga0065165_1000836 3300005262 Bacteria 40452
16 Ga0070670_100085383 3300005331 Bacteria 2712
17 Ga0070680_100003253 3300005336 Bacteria 12095
18 Ga0070660_100000528 3300005339 Bacteria 25477
19 Ga0070669_100011939 3300005353 Bacteria 6163
20 Ga0070669_100088218 3300005353 Bacteria 2321
21 Ga0070671_100005832 3300005355 Bacteria 9810
22 Ga0070673_100032052 3300005364 Bacteria 3952
23 Ga0070659_100046627 3300005366 Bacteria 3397
24 Ga0070703_10001229 3300005406 Bacteria 7815
25 Ga0070713_100083969 3300005436 Bacteria 2724
26 Ga0070701_10008110 3300005438 Bacteria 4524
27 Ga0070711_100000034 3300005439 Bacteria 95912
28 Ga0070705_100000470 3300005440 Bacteria 23186
29 Ga0070708_100026512 3300005445 Bacteria 4962
30 Ga0068867_100000004 3300005459 Bacteria 180739
31 Ga0070699_100002378 3300005518 Bacteria 16873
32 Ga0070697_100062540 3300005536 Bacteria 3038
33 Ga0070672_100035238 3300005543 Bacteria 3803
34 Ga0070672_100076497 3300005543 Bacteria 2674
35 Ga0070695_100043691 3300005545 Bacteria 2850
36 Ga0070696_100034733 3300005546 Bacteria 3470
37 Ga0068857_100011890 3300005577 Bacteria 7572
38 Ga0068859_100004567 3300005617 Bacteria 14118
39 Ga0068864_100030106 3300005618 Bacteria 4601
40 Ga0068860_100000071 3300005843 Bacteria 178413
41 Ga0068860_100001535 3300005843 Bacteria 24870
42 Ga0075365_10017620 3300006038 Bacteria 4375
43 Ga0075370_10005660 3300006353 Bacteria 6236
44 Ga0075434_100025091 3300006871 Bacteria 5831
45 Ga0097620_100004567 3300006931 Bacteria 14118
46 Ga0105244_10003165 3300009036 Bacteria 11955
47 Ga0105240_10047168 3300009093 Bacteria 5453
48 Ga0111539_10012498 3300009094 Bacteria 10640
49 Ga0111539_10048435 3300009094 Bacteria 5074
50 Ga0105243_10052863 3300009148 Bacteria 3219
51 Ga0105238_10043372 3300009551 Bacteria 4551
52 Ga0105249_10001291 3300009553 Bacteria 21972
53 Ga0157377_10000010 3300014745 Bacteria 380929
54 Ga0157379_10078155 3300014968 Bacteria 2963
55 Ga0157376_10004872 3300014969 Bacteria 9358
56 Ga0213872_10000057 3300021361 Bacteria 100906
57 Ga0213872_10000871 3300021361 Bacteria 21851
58 Ga0213872_10008547 3300021361 Bacteria 4952
59 Ga0209435_100030 3300025206 Bacteria 170822
60 Ga0209435_100134 3300025206 Bacteria 25335
61 Ga0209147_100159 3300025229 Bacteria 91615
62 Ga0209258_100259 3300025242 Bacteria 92050
63 Ga0207425_1000001 3300025245 Bacteria 2525432
64 Ga0207425_1000249 3300025245 Bacteria 41006
65 Ga0209646_1000023 3300025246 Bacteria 441100
66 Ga0209646_1000057 3300025246 Bacteria 266384
67 Ga0209646_1000100 3300025246 Bacteria 170822
68 Ga0209026_1000091 3300025250 Bacteria 171170
69 Ga0209148_1000114 3300025254 Bacteria 192073
70 Ga0209148_1004450 3300025254 Bacteria 3453
71 Ga0209759_1000084 3300025256 Bacteria 169233
72 Ga0209759_1000141 3300025256 Bacteria 124528
73 Ga0209129_1000001 3300025258 Bacteria 1452436
74 Ga0209565_1000103 3300025263 Bacteria 127199
75 Ga0209565_1000571 3300025263 Bacteria 25126
76 Ga0209673_1004973 3300025273 Bacteria 6892
77 Ga0209130_1010858 3300025284 Bacteria 2478
78 Ga0209675_1000479 3300025291 Bacteria 30333
79 Ga0209675_1001467 3300025291 Bacteria 13553
80 Ga0209675_1006806 3300025291 Bacteria 4508
81 Ga0209675_1011662 3300025291 Bacteria 2898
82 Ga0209676_1000066 3300025292 Bacteria 317897
83 Ga0209676_1000196 3300025292 Bacteria 135726
84 Ga0209676_1002212 3300025292 Bacteria 14505
85 Ga0209025_1000769 3300025294 Bacteria 53174
86 Ga0209025_1001052 3300025294 Bacteria 40294
87 Ga0209025_1001357 3300025294 Bacteria 32874
88 Ga0209564_1000002 3300025295 Bacteria 1636803
89 Ga0209564_1000743 3300025295 Bacteria 46196
90 Ga0209564_1005329 3300025295 Bacteria 7403
91 Ga0209564_1016376 3300025295 Bacteria 2955
92 Ga0209758_1000116 3300025297 Bacteria 198356
93 Ga0209050_1000736 3300025298 Bacteria 47556
94 Ga0209050_1006522 3300025298 Bacteria 6878
95 Ga0209050_1008975 3300025298 Bacteria 5213
96 Ga0209256_1001951 3300025299 Bacteria 18696
97 Ga0209256_1007308 3300025299 Bacteria 5498
98 Ga0207426_1004415 3300025302 Bacteria 6877
99 Ga0209051_1027701 3300025303 Bacteria 2252
100 Ga0209257_1000065 3300025304 Bacteria 353604
101 Ga0209257_1000180 3300025304 Bacteria 158090
102 Ga0209257_1000293 3300025304 Bacteria 110422
103 Ga0209257_1000737 3300025304 Bacteria 49659
104 Ga0207655_1003178 3300025728 Bacteria 12400
105 Ga0207655_1017375 3300025728 Bacteria 3882
106 Ga0207647_10016659 3300025904 Bacteria 5011
107 Ga0207705_10001077 3300025909 Bacteria 22145
108 Ga0207705_10007639 3300025909 Bacteria 7952
109 Ga0207654_10008671 3300025911 Bacteria 5153
110 Ga0207695_10101518 3300025913 Bacteria 2870
111 Ga0207663_10000002 3300025916 Bacteria 534155
112 Ga0207657_10001160 3300025919 Bacteria 28040
113 Ga0207649_10004570 3300025920 Bacteria 7508
114 Ga0207681_10005851 3300025923 Bacteria 7538
115 Ga0207644_10042273 3300025931 Bacteria 3229
116 Ga0207690_10005199 3300025932 Bacteria 7673
117 Ga0207690_10006363 3300025932 Bacteria 6998
118 Ga0207709_10001077 3300025935 Bacteria 20081
119 Ga0207691_10025653 3300025940 Bacteria 5531
120 Ga0207691_10111539 3300025940 Bacteria 2432
121 Ga0207679_10009005 3300025945 Bacteria 6380
122 Ga0207651_10015272 3300025960 Bacteria 4458
123 Ga0207651_10022952 3300025960 Bacteria 3828
124 Ga0207712_10030510 3300025961 Bacteria 3625
125 Ga0207678_10013363 3300026067 Bacteria 7205
126 Ga0207678_10049848 3300026067 Bacteria 3618
127 Ga0207708_10002202 3300026075 Bacteria 14398
128 Ga0207641_10000872 3300026088 Bacteria 31574
129 Ga0207648_10000002 3300026089 Bacteria 307909
130 Ga0207674_10006100 3300026116 Bacteria 14247
131 Ga0207698_10006225 3300026142 Bacteria 7429
132 Ga0207428_10047051 3300027907 Bacteria 3465
133 Ga0268266_10000234 3300028379 Bacteria 94817
134 Ga0268265_10002007 3300028380 Bacteria 16031
135 Ga0268264_10000073 3300028381 Bacteria 260615
136 Ga0268264_10000100 3300028381 Bacteria 227852
137 Ga0268264_10009253 3300028381 Bacteria 8156
138 Ga0265336_10000008 3300028666 Bacteria 336082
139 Ga0265338_10095908 3300028800 Bacteria 2435
140 Ga0265324_10007184 3300029957 Bacteria 4547
141 Ga0307408_100000030 3300031548 Bacteria 223389
142 Ga0307408_100001280 3300031548 Bacteria 18860
143 Ga0307408_100006936 3300031548 Bacteria 7498
144 Ga0307514_10016003 3300031649 Bacteria 6178
145 Ga0307514_10017254 3300031649 Bacteria 5944
146 Ga0307516_10001568 3300031730 Bacteria 31474
147 Ga0307516_10003207 3300031730 Bacteria 21235
148 Ga0307406_10033063 3300031901 Bacteria 3162
149 Ga0373939_0000071 3300035114 Bacteria 32243
150 Ga0373960_0000615 3300035121 Bacteria 7289
151 Ga0373931_0000591 3300035691 Bacteria 14952
152 Ga0373947_0030796 3300035725 Bacteria 3154
153 Ga0395899_0000086 3300037312 Bacteria 157725
154 Ga0395900_0000584 3300037418 Bacteria 50170
155 Ga0395900_0038772 3300037418 Bacteria 4911
156 Ga0395898_0004694 3300037466 Bacteria 14873
157 Ga0395905_0000033 3300037471 Bacteria 279363
158 Ga0395905_0000221 3300037471 Bacteria 87203
159 Ga0395905_0014924 3300037471 Bacteria 7410
160 Ga0395905_0053525 3300037471 Bacteria 3777
161 Ga0395905_0066848 3300037471 Bacteria 3366
162 Ga0436361_0254808 3300039447 Bacteria 14252
163 Ga0439466_0009070 3300041411 Bacteria 3733
164 Ga0439465_0001406 3300041413 Bacteria 7785
165 Ga0439449_0000776 3300042007 Bacteria 12298
166 Ga0450893_0002129 3300042532 Bacteria 3085
167 Ga0466969_0000007 3300044656 Bacteria 152114
168 Ga0466965_0017706 3300044683 Bacteria 3408
169 Ga0466965_0031158 3300044683 Bacteria 2600
170 Ga0466966_0008799 3300044684 Bacteria 6684
171 Ga0466961_0004178 3300044693 Bacteria 9020
172 Ga0466961_0014766 3300044693 Bacteria 5017
173 Ga0466963_0004866 3300044694 Bacteria 7824
174 Ga0466964_0000033 3300044706 Bacteria 28596
175 Ga0466971_0021677 3300044719 Bacteria 2859
176 Ga0466957_0016343 3300044842 Bacteria 4340
177 Ga0466960_0006607 3300044901 Bacteria 4661
178 Ga0466959_0000301 3300045049 Bacteria 29334
179 Ga0466959_0001084 3300045049 Bacteria 16284
180 Ga0466958_0009636 3300045836 Bacteria 5387
181 Ga0466958_0061683 3300045836 Bacteria 2284
182 Ga0466967_0040746 3300045976 Bacteria 4000
183 Ga0495590_0000034 3300046457 Bacteria 129910
184 Ga0495638_0000072 3300046460 Bacteria 164926
185 Ga0495650_0000687 3300046471 Bacteria 43702
186 Ga0495580_0041814 3300046472 Bacteria 3267
187 Ga0495580_0067388 3300046472 Bacteria 2504
188 Ga0495605_0000107 3300046474 Bacteria 105085
189 Ga0495584_0000002 3300046491 Bacteria 512179
190 Ga0495585_0000003 3300046492 Bacteria 406344
191 Ga0495585_0014710 3300046492 Bacteria 4552
192 Ga0495585_0030270 3300046492 Bacteria 3079
193 Ga0495583_0000496 3300046506 Bacteria 57163
194 Ga0495616_0013463 3300046513 Bacteria 4613
195 Ga0495643_0042301 3300046522 Bacteria 2482
196 Ga0495644_0010279 3300046523 Bacteria 3605
197 Ga0495648_0000037 3300046524 Bacteria 195401
198 Ga0495648_0008531 3300046524 Bacteria 8052
199 Ga0495665_0005867 3300046531 Bacteria 6621
200 Ga0495609_0010707 3300046538 Bacteria 4388
201 Ga0495645_0003664 3300046543 Bacteria 10439
202 Ga0495622_0000002 3300046557 Bacteria 321742
203 Ga0495622_0026995 3300046557 Bacteria 2679
204 Ga0495633_0000121 3300046558 Bacteria 105197
205 Ga0495633_0005001 3300046558 Bacteria 8269
206 Ga0495588_0024599 3300046674 Bacteria 2992
207 Ga0495623_0016435 3300046679 Bacteria 4779
208 Ga0495613_0059080 3300046689 Bacteria 2812
209 Ga0495604_0013465 3300047317 Bacteria 6516
210 Ga0495672_0000030 3300047320 Bacteria 305021
211 Ga0495683_0000007 3300047323 Bacteria 268546
212 Ga0495677_0002032 3300047445 Bacteria 8077
213 Ga0495673_0000136 3300047469 Bacteria 134839
214 Ga0495686_0000344 3300047472 Bacteria 76585
215 Ga0496102_0003137 3300048905 Bacteria 14019
216 Ga0496103_0008995 3300048906 Bacteria 5918
217 Ga0496103_0009377 3300048906 Bacteria 5797
218 Ga0496106_0047910 3300048909 Bacteria 3218
219 Ga0496115_0019396 3300048918 Bacteria 5232
220 Ga0496117_0006172 3300048920 Bacteria 12244
221 Ga0496118_0000889 3300048921 Bacteria 46956
222 Ga0496118_0020638 3300048921 Bacteria 5836
223 Ga0496121_0003637 3300048924 Bacteria 21705
224 Ga0496122_0000748 3300048925 Bacteria 63291
225 Ga0496122_0012500 3300048925 Bacteria 8441
226 Ga0496123_0001196 3300048926 Bacteria 38152
227 Ga0496123_0004569 3300048926 Bacteria 14433
228 Ga0496126_0000240 3300048929 Bacteria 117890
229 Ga0495678_017441 3300049459 Bacteria 3254
230 Ga0501034_0000588 3300049571 Bacteria 57446
231 Ga0501043_0001256 3300049579 Bacteria 22358
232 Ga0501198_000025 3300049649 Bacteria 66985
233 Ga0501209_001727 3300049656 Bacteria 3172
234 Ga0501222_000033 3300049662 Bacteria 55105
235 Ga0501225_0004610 3300049705 Bacteria 4100
236 nmdc:mga07m45_1577_c1 3300050496 Bacteria 10502
237 nmdc:mga08y16_11593_c1 3300050511 Bacteria 9263
238 nmdc:mga0n895_23049_c1 3300050512 Bacteria 5847
239 Ga0495601_0036322 3300053077 Bacteria 3076
240 Ga0495612_0016497 3300053078 Bacteria 2959
241 Ga0500618_000476 3300053125 Bacteria 25891
242 Ga0500559_0000195 3300053136 Bacteria 48743
243 Ga0500622_0000043 3300053156 Bacteria 161080
244 Ga0466962_0002603 3300061719 Bacteria 8573
245 Ga0466962_0021350 3300061719 Bacteria 3109
246 Ga0466962_0028705 3300061719 Bacteria 2664

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_0040746 Ga0466967_0040746_2262_3944 548
2 3300061719 Ga0466962_0028705 Ga0466962_0028705_22_1800 573
3 3300046472 Ga0495580_0067388 Ga0495580_0067388_743_2482 579
4 3300005439 Ga0070711_100000034 Ga0070711_10000003442 598
5 3300025916 Ga0207663_10000002 Ga0207663_10000002231 598
6 3300044683 Ga0466965_0031158 Ga0466965_0031158_37_1869 598
7 3300009148 Ga0105243_10052863 Ga0105243_100528632 610
8 3300048921 Ga0496118_0000889 Ga0496118_0000889_8729_10687 625
9 3300048924 Ga0496121_0003637 Ga0496121_0003637_14611_16569 625
10 3300048929 Ga0496126_0000240 Ga0496126_0000240_9987_11945 625
11 3300046492 Ga0495585_0030270 Ga0495585_0030270_807_2792 629
12 3300009094 Ga0111539_10048435 Ga0111539_100484352 638
13 3300027907 Ga0207428_10047051 Ga0207428_100470514 638
14 3300048925 Ga0496122_0012500 Ga0496122_0012500_5911_7863 639
15 3300005366 Ga0070659_100046627 Ga0070659_1000466272 640
16 3300025932 Ga0207690_10005199 Ga0207690_100051996 640
17 3300025303 Ga0209051_1027701 Ga0209051_10277012 641
18 3300048920 Ga0496117_0006172 Ga0496117_0006172_9690_11705 642
19 3300048921 Ga0496118_0020638 Ga0496118_0020638_163_2178 642
20 3300048926 Ga0496123_0004569 Ga0496123_0004569_7926_9941 642
21 3300006871 Ga0075434_100025091 Ga0075434_1000250914 645
22 3300009094 Ga0111539_10012498 Ga0111539_100124982 645
23 3300050511 nmdc:mga08y16_11593_c1 nmdc:mga08y16_11593_c1_3614_5593 645
24 3300050512 nmdc:mga0n895_23049_c1 nmdc:mga0n895_23049_c1_2160_4139 645
25 3300025304 Ga0209257_1000180 Ga0209257_100018066 648
26 iso_pu_bacteria 2513237164 2514039745 648
27 3300005331 Ga0070670_100085383 Ga0070670_1000853832 649
28 3300005355 Ga0070671_100005832 Ga0070671_1000058327 649
29 3300005364 Ga0070673_100032052 Ga0070673_1000320522 649
30 3300005436 Ga0070713_100083969 Ga0070713_1000839692 649
31 3300005543 Ga0070672_100076497 Ga0070672_1000764972 649
32 3300025931 Ga0207644_10042273 Ga0207644_100422732 649
33 3300025940 Ga0207691_10111539 Ga0207691_101115392 649
34 3300025960 Ga0207651_10022952 Ga0207651_100229522 649
35 3300053077 Ga0495601_0036322 Ga0495601_0036322_759_2708 649
36 3300053078 Ga0495612_0016497 Ga0495612_0016497_885_2834 649
37 iso_pu_bacteria 2512875024 2512963725 649
38 3300028666 Ga0265336_10000008 Ga0265336_10000008218 650
39 3300028800 Ga0265338_10095908 Ga0265338_100959082 650
40 3300029957 Ga0265324_10007184 Ga0265324_100071844 650
41 3300031730 Ga0307516_10003207 Ga0307516_100032075 650
42 3300005353 Ga0070669_100088218 Ga0070669_1000882182 651
43 iso_pu_bacteria 2599185354 2600204155 651
44 3300025904 Ga0207647_10016659 Ga0207647_100166593 652
45 3300025940 Ga0207691_10025653 Ga0207691_100256536 652
46 iso_pu_bacteria 2751185897 2753767082 652
47 iso_pu_bacteria 2894652903 2894653583 652
48 3300046513 Ga0495616_0013463 Ga0495616_0013463_922_2931 653
49 3300046558 Ga0495633_0005001 Ga0495633_0005001_3107_5116 653
50 iso_pu_bacteria 2508501128 2509153909 653
51 iso_pu_bacteria 2513237150 2513953015 653
52 iso_pu_bacteria 2513237165 2514043882 653
53 iso_pu_bacteria 2935916978 2935924284 653
54 iso_pu_bacteria 2935942939 2935950058 653
55 iso_pu_bacteria 644736347 644747371 653
56 iso_pu_bacteria 8019687851 8019691810 653
57 3300003784 Ga0055534_1001141 Ga0055534_10011413 656
58 3300005336 Ga0070680_100003253 Ga0070680_10000325315 656
59 3300005406 Ga0070703_10001229 Ga0070703_100012296 656
60 3300005438 Ga0070701_10008110 Ga0070701_100081103 656
61 3300005440 Ga0070705_100000470 Ga0070705_10000047018 656
62 3300005445 Ga0070708_100026512 Ga0070708_1000265124 656
63 3300005518 Ga0070699_100002378 Ga0070699_10000237818 656
64 3300005536 Ga0070697_100062540 Ga0070697_1000625401 656
65 3300005545 Ga0070695_100043691 Ga0070695_1000436912 656
66 3300005546 Ga0070696_100034733 Ga0070696_1000347332 656
67 3300005577 Ga0068857_100011890 Ga0068857_1000118904 656
68 3300005617 Ga0068859_100004567 Ga0068859_10000456714 656
69 3300005618 Ga0068864_100030106 Ga0068864_1000301062 656
70 3300005843 Ga0068860_100000071 Ga0068860_100000071117 656
71 3300006931 Ga0097620_100004567 Ga0097620_10000456714 656
72 3300009553 Ga0105249_10001291 Ga0105249_1000129121 656
73 3300014968 Ga0157379_10078155 Ga0157379_100781553 656
74 3300021361 Ga0213872_10008547 Ga0213872_100085471 656
75 3300025263 Ga0209565_1000103 Ga0209565_100010325 656
76 3300025284 Ga0209130_1010858 Ga0209130_10108582 656
77 3300025291 Ga0209675_1000479 Ga0209675_10004792 656
78 3300025291 Ga0209675_1006806 Ga0209675_10068064 656
79 3300025291 Ga0209675_1011662 Ga0209675_10116622 656
80 3300025292 Ga0209676_1000066 Ga0209676_100006629 656
81 3300025294 Ga0209025_1001052 Ga0209025_100105212 656
82 3300025294 Ga0209025_1001357 Ga0209025_100135715 656
83 3300025295 Ga0209564_1016376 Ga0209564_10163762 656
84 3300025961 Ga0207712_10030510 Ga0207712_100305102 656
85 3300026067 Ga0207678_10013363 Ga0207678_100133636 656
86 3300026075 Ga0207708_10002202 Ga0207708_100022025 656
87 3300026116 Ga0207674_10006100 Ga0207674_1000610013 656
88 3300028379 Ga0268266_10000234 Ga0268266_100002343 656
89 3300028380 Ga0268265_10002007 Ga0268265_1000200715 656
90 3300028381 Ga0268264_10000073 Ga0268264_10000073183 656
91 3300028381 Ga0268264_10009253 Ga0268264_100092532 656
92 3300035725 Ga0373947_0030796 Ga0373947_0030796_83_2053 656
93 3300048905 Ga0496102_0003137 Ga0496102_0003137_10304_12274 656
94 3300048906 Ga0496103_0008995 Ga0496103_0008995_3153_5123 656
95 3300048909 Ga0496106_0047910 Ga0496106_0047910_314_2284 656
96 3300048918 Ga0496115_0019396 Ga0496115_0019396_447_2417 656
97 3300025294 Ga0209025_1000769 Ga0209025_100076923 657
98 3300050496 nmdc:mga07m45_1577_c1 nmdc:mga07m45_1577_c1_8297_10327 657
99 3300044683 Ga0466965_0017706 Ga0466965_0017706_255_2252 658
100 3300049571 Ga0501034_0000588 Ga0501034_0000588_44453_46429 658
101 3300005339 Ga0070660_100000528 Ga0070660_10000052811 659
102 3300025254 Ga0209148_1000114 Ga0209148_100011499 659
103 3300025909 Ga0207705_10001077 Ga0207705_100010775 659
104 3300025919 Ga0207657_10001160 Ga0207657_1000116015 659
105 3300026142 Ga0207698_10006225 Ga0207698_100062257 659
106 3300037471 Ga0395905_0053525 Ga0395905_0053525_1007_3010 659
107 3300044693 Ga0466961_0004178 Ga0466961_0004178_5530_7545 659
108 3300044901 Ga0466960_0006607 Ga0466960_0006607_1269_3284 659
109 3300045049 Ga0466959_0001084 Ga0466959_0001084_13540_15555 659
110 3300045836 Ga0466958_0061683 Ga0466958_0061683_26_2041 659
111 3300003771 Ga0055526_1000001 Ga0055526_1000001374 660
112 3300025295 Ga0209564_1000002 Ga0209564_1000002193 660
113 3300049649 Ga0501198_000025 Ga0501198_000025_55083_57086 660
114 3300049662 Ga0501222_000033 Ga0501222_000033_43204_45207 660
115 3300006353 Ga0075370_10005660 Ga0075370_100056603 661
116 3300009093 Ga0105240_10047168 Ga0105240_100471681 661
117 3300009551 Ga0105238_10043372 Ga0105238_100433723 661
118 3300025298 Ga0209050_1000736 Ga0209050_100073617 661
119 3300037312 Ga0395899_0000086 Ga0395899_0000086_145774_147759 661
120 3300046492 Ga0495585_0014710 Ga0495585_0014710_449_2434 661
121 3300046506 Ga0495583_0000496 Ga0495583_0000496_24224_26209 661
122 3300053125 Ga0500618_000476 Ga0500618_000476_4334_6334 661
123 3300053156 Ga0500622_0000043 Ga0500622_0000043_114216_116219 661
124 iso_pu_bacteria 2643221638 2644215720 661
125 3300021361 Ga0213872_10000871 Ga0213872_1000087116 662
126 3300037471 Ga0395905_0000033 Ga0395905_0000033_234266_236254 662
127 3300039447 Ga0436361_0254808 Ga0436361_0254808_3793_5781 662
128 iso_pu_bacteria 2593339238 2595448797 662
129 iso_pu_bacteria 2643221554 2643787203 662
130 iso_pu_bacteria 2842711865 2842712406 662
131 iso_pu_bacteria 2857558681 2857562804 662
132 iso_pu_bacteria 2857564685 2857569942 662
133 iso_pu_bacteria 2904424332 2904424984 662
134 iso_pu_bacteria 2935926038 2935933103 662
135 iso_pu_bacteria 2935934488 2935941580 662
136 iso_pu_bacteria 2935951376 2935958574 662
137 iso_pu_bacteria 2935967501 2935974643 662
138 3300005262 Ga0065165_1000836 Ga0065165_100083625 663
139 3300048906 Ga0496103_0009377 Ga0496103_0009377_2954_4948 663
140 iso_pu_bacteria 2511231003 2511249049 663
141 iso_pu_bacteria 2548876994 2550696011 663
142 iso_pu_bacteria 2585428057 2587727013 663
143 iso_pu_bacteria 2585428058 2587732047 663
144 iso_pu_bacteria 2643221585 2643936715 663
145 iso_pu_bacteria 2643221592 2643970569 663
146 iso_pu_bacteria 2643221625 2644139150 663
147 iso_pu_bacteria 2643221644 2644245208 663
148 iso_pu_bacteria 2643221648 2644274760 663
149 iso_pu_bacteria 2643221656 2644318614 663
150 iso_pu_bacteria 2643221683 2644467130 663
151 iso_pu_bacteria 2738541277 2738718305 663
152 iso_pu_bacteria 2738543019 2739281492 663
153 iso_pu_bacteria 2818991445 2819593510 663
154 iso_pu_bacteria 2842677519 2842677625 663
155 iso_pu_bacteria 2842733646 2842734941 663
156 iso_pu_bacteria 2848297114 2848297691 663
157 iso_pu_bacteria 2857553236 2857555163 663
158 iso_pu_bacteria 2884811622 2884816512 663
159 iso_pu_bacteria 2884836552 2884837739 663
160 iso_pu_bacteria 2884852848 2884854031 663
161 iso_pu_bacteria 2896154374 2896154852 663
162 iso_pu_bacteria 2904541872 2904545014 663
163 iso_pu_bacteria 2919462493 2919467103 663
164 iso_pu_bacteria 2929160207 2929165187 663
165 iso_pu_bacteria 8003014200 8003014249 663
166 3300005459 Ga0068867_100000004 Ga0068867_10000000480 664
167 3300014745 Ga0157377_10000010 Ga0157377_10000010141 664
168 3300025295 Ga0209564_1000743 Ga0209564_100074344 664
169 3300025935 Ga0207709_10001077 Ga0207709_1000107710 664
170 3300026089 Ga0207648_10000002 Ga0207648_1000000278 664
171 3300031548 Ga0307408_100000030 Ga0307408_10000003019 664
172 3300031548 Ga0307408_100001280 Ga0307408_10000128015 664
173 3300031730 Ga0307516_10001568 Ga0307516_100015683 664
174 3300044656 Ga0466969_0000007 Ga0466969_0000007_69361_71355 664
175 3300061719 Ga0466962_0002603 Ga0466962_0002603_2878_4872 664
176 iso_pu_bacteria 2643221628 2644161935 664
177 iso_pu_bacteria 2945909444 2945910200 664
178 iso_pu_bacteria 2945945610 2945946215 664
179 iso_pu_bacteria 2945972063 2945975818 664
180 3300003784 Ga0055534_1002008 Ga0055534_10020085 665
181 3300003790 Ga0055528_1009580 Ga0055528_10095803 665
182 3300003791 Ga0055530_10008869 Ga0055530_100088692 665
183 3300005353 Ga0070669_100011939 Ga0070669_1000119395 665
184 3300005543 Ga0070672_100035238 Ga0070672_1000352383 665
185 3300025245 Ga0207425_1000001 Ga0207425_10000011579 665
186 3300025245 Ga0207425_1000249 Ga0207425_100024933 665
187 3300025258 Ga0209129_1000001 Ga0209129_1000001756 665
188 3300025263 Ga0209565_1000571 Ga0209565_100057124 665
189 3300025291 Ga0209675_1001467 Ga0209675_100146710 665
190 3300025295 Ga0209564_1005329 Ga0209564_10053293 665
191 3300025297 Ga0209758_1000116 Ga0209758_100011617 665
192 3300025298 Ga0209050_1006522 Ga0209050_10065223 665
193 3300025299 Ga0209256_1001951 Ga0209256_100195115 665
194 3300025299 Ga0209256_1007308 Ga0209256_10073084 665
195 3300025302 Ga0207426_1004415 Ga0207426_10044156 665
196 3300025304 Ga0209257_1000293 Ga0209257_100029316 665
197 3300025923 Ga0207681_10005851 Ga0207681_100058513 665
198 3300031649 Ga0307514_10016003 Ga0307514_100160033 665
199 3300037418 Ga0395900_0000584 Ga0395900_0000584_30569_32572 665
200 3300037466 Ga0395898_0004694 Ga0395898_0004694_5494_7497 665
201 3300042532 Ga0450893_0002129 Ga0450893_0002129_914_2923 665
202 3300044684 Ga0466966_0008799 Ga0466966_0008799_3604_5607 665
203 3300044693 Ga0466961_0014766 Ga0466961_0014766_1483_3486 665
204 3300044694 Ga0466963_0004866 Ga0466963_0004866_4358_6361 665
205 3300044706 Ga0466964_0000033 Ga0466964_0000033_4127_6130 665
206 3300044719 Ga0466971_0021677 Ga0466971_0021677_359_2362 665
207 3300044842 Ga0466957_0016343 Ga0466957_0016343_1126_3129 665
208 3300045049 Ga0466959_0000301 Ga0466959_0000301_26529_28532 665
209 3300045836 Ga0466958_0009636 Ga0466958_0009636_1867_3870 665
210 3300046522 Ga0495643_0042301 Ga0495643_0042301_464_2467 665
211 3300053136 Ga0500559_0000195 Ga0500559_0000195_16298_18295 665
212 3300061719 Ga0466962_0021350 Ga0466962_0021350_639_2642 665
213 3300002741 JGI25157J39369_1000623 JGI25157J39369_100062318 666
214 3300003575 Ga0007409J51694_1008758 Ga0007409J51694_10087582 666
215 3300003758 Ga0055532_1000102 Ga0055532_100010212 666
216 3300003761 Ga0055535_1003225 Ga0055535_10032252 666
217 3300003771 Ga0055526_1003976 Ga0055526_10039766 666
218 3300003784 Ga0055534_1008638 Ga0055534_10086382 666
219 3300003791 Ga0055530_10003264 Ga0055530_100032642 666
220 3300005843 Ga0068860_100001535 Ga0068860_10000153520 666
221 3300014969 Ga0157376_10004872 Ga0157376_100048729 666
222 3300021361 Ga0213872_10000057 Ga0213872_1000005710 666
223 3300025206 Ga0209435_100030 Ga0209435_100030144 666
224 3300025206 Ga0209435_100134 Ga0209435_10013414 666
225 3300025229 Ga0209147_100159 Ga0209147_10015965 666
226 3300025242 Ga0209258_100259 Ga0209258_10025965 666
227 3300025246 Ga0209646_1000057 Ga0209646_100005714 666
228 3300025246 Ga0209646_1000100 Ga0209646_1000100144 666
229 3300025250 Ga0209026_1000091 Ga0209026_100009112 666
230 3300025254 Ga0209148_1004450 Ga0209148_10044502 666
231 3300025256 Ga0209759_1000084 Ga0209759_1000084142 666
232 3300025256 Ga0209759_1000141 Ga0209759_100014114 666
233 3300025273 Ga0209673_1004973 Ga0209673_10049733 666
234 3300025292 Ga0209676_1000196 Ga0209676_100019698 666
235 3300025292 Ga0209676_1002212 Ga0209676_100221210 666
236 3300025298 Ga0209050_1008975 Ga0209050_10089753 666
237 3300025304 Ga0209257_1000065 Ga0209257_100006541 666
238 3300025304 Ga0209257_1000737 Ga0209257_100073710 666
239 3300025728 Ga0207655_1003178 Ga0207655_100317811 666
240 3300025909 Ga0207705_10007639 Ga0207705_100076391 666
241 3300025911 Ga0207654_10008671 Ga0207654_100086713 666
242 3300025913 Ga0207695_10101518 Ga0207695_101015183 666
243 3300025920 Ga0207649_10004570 Ga0207649_100045704 666
244 3300025932 Ga0207690_10006363 Ga0207690_100063633 666
245 3300025945 Ga0207679_10009005 Ga0207679_100090058 666
246 3300025960 Ga0207651_10015272 Ga0207651_100152722 666
247 3300026067 Ga0207678_10049848 Ga0207678_100498484 666
248 3300026088 Ga0207641_10000872 Ga0207641_1000087217 666
249 3300028381 Ga0268264_10000100 Ga0268264_10000100200 666
250 3300031548 Ga0307408_100006936 Ga0307408_1000069367 666
251 3300037418 Ga0395900_0038772 Ga0395900_0038772_1823_3826 666
252 3300037471 Ga0395905_0000221 Ga0395905_0000221_82980_84989 666
253 3300037471 Ga0395905_0014924 Ga0395905_0014924_2739_4742 666
254 3300037471 Ga0395905_0066848 Ga0395905_0066848_66_2123 666
255 3300041411 Ga0439466_0009070 Ga0439466_0009070_840_2843 666
256 3300041413 Ga0439465_0001406 Ga0439465_0001406_4963_6966 666
257 3300042007 Ga0439449_0000776 Ga0439449_0000776_6578_8581 666
258 3300046471 Ga0495650_0000687 Ga0495650_0000687_10595_12595 666
259 3300046472 Ga0495580_0041814 Ga0495580_0041814_818_2821 666
260 3300046491 Ga0495584_0000002 Ga0495584_0000002_419728_421731 666
261 3300046492 Ga0495585_0000003 Ga0495585_0000003_73293_75296 666
262 3300046523 Ga0495644_0010279 Ga0495644_0010279_226_2226 666
263 3300046531 Ga0495665_0005867 Ga0495665_0005867_1944_3947 666
264 3300046543 Ga0495645_0003664 Ga0495645_0003664_2653_4656 666
265 3300046557 Ga0495622_0000002 Ga0495622_0000002_198775_200775 666
266 3300046557 Ga0495622_0026995 Ga0495622_0026995_549_2549 666
267 3300046674 Ga0495588_0024599 Ga0495588_0024599_371_2371 666
268 3300046679 Ga0495623_0016435 Ga0495623_0016435_931_2931 666
269 3300046689 Ga0495613_0059080 Ga0495613_0059080_399_2399 666
270 3300047317 Ga0495604_0013465 Ga0495604_0013465_416_2419 666
271 3300047323 Ga0495683_0000007 Ga0495683_0000007_166851_168854 666
272 3300047445 Ga0495677_0002032 Ga0495677_0002032_3197_5197 666
273 3300047472 Ga0495686_0000344 Ga0495686_0000344_37012_39015 666
274 3300048925 Ga0496122_0000748 Ga0496122_0000748_45890_47893 666
275 3300048926 Ga0496123_0001196 Ga0496123_0001196_15399_17402 666
276 3300049579 Ga0501043_0001256 Ga0501043_0001256_5128_7143 666
277 3300049656 Ga0501209_001727 Ga0501209_001727_111_2123 666
278 iso_pu_bacteria 2643221544 2643745647 667
279 iso_pu_bacteria 2643221646 2644257704 667
280 3300002738 JGI25154J39366_1001873 JGI25154J39366_10018734 668
281 3300003574 Ga0007410J51695_1014726 Ga0007410J51695_10147262 668
282 3300006038 Ga0075365_10017620 Ga0075365_100176204 668
283 3300009036 Ga0105244_10003165 Ga0105244_100031653 668
284 3300025246 Ga0209646_1000023 Ga0209646_1000023248 668
285 3300025728 Ga0207655_1017375 Ga0207655_10173754 668
286 3300031649 Ga0307514_10017254 Ga0307514_100172544 668
287 3300031901 Ga0307406_10033063 Ga0307406_100330632 668
288 3300035114 Ga0373939_0000071 Ga0373939_0000071_14313_16346 668
289 3300035121 Ga0373960_0000615 Ga0373960_0000615_4549_6582 668
290 3300035691 Ga0373931_0000591 Ga0373931_0000591_7406_9439 668
291 3300046457 Ga0495590_0000034 Ga0495590_0000034_111906_113912 668
292 3300046460 Ga0495638_0000072 Ga0495638_0000072_117704_119710 668
293 3300046474 Ga0495605_0000107 Ga0495605_0000107_93081_95087 668
294 3300046524 Ga0495648_0000037 Ga0495648_0000037_76261_78267 668
295 3300046524 Ga0495648_0008531 Ga0495648_0008531_2970_4976 668
296 3300046538 Ga0495609_0010707 Ga0495609_0010707_564_2570 668
297 3300046558 Ga0495633_0000121 Ga0495633_0000121_81898_83904 668
298 3300047320 Ga0495672_0000030 Ga0495672_0000030_95086_97092 668
299 3300047469 Ga0495673_0000136 Ga0495673_0000136_84822_86828 668
300 3300049459 Ga0495678_017441 Ga0495678_017441_314_2320 668
301 3300049705 Ga0501225_0004610 Ga0501225_0004610_272_2284 668

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

58

499

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8f68-assembly1.cif.gz_A e. coli cytochrome bo3 ubiquinol oxidase monomer 0.9729 12 664
8f68-assembly1.cif.gz_A e. coli cytochrome bo3 ubiquinol oxidase monomer 0.9641 12 664
7qhm-assembly1.cif.gz_Q cytochrome bcc-aa3 supercomplex (respiratory supercomplex iii2/iv2) from corynebacterium glutamicum (stigmatellin and azide bound) 0.9393 63 578
3oma-assembly2.cif.gz_C catalytic core subunits (i and ii) of cytochrome c oxidase from rhodobacter sphaeroides with k362m mutation 0.9367 59 557
3abk-assembly1.cif.gz_A bovine heart cytochrome c oxidase at the no-bound fully reduced state (50k) 0.9365 58 565
ID Description Score Start End Superfamily
af_Q2FZK0_30_556_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9391 43 563 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9319 52 575 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9284 52 575 1.20.210.10
af_Q2FZK0_30_556_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.927 43 563 1.20.210.10
af_P9WP71_20_544_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9268 60 572 1.20.210.10
ID Description Score Start End GO Terms
AF-A0A379WEL2-F1-model_v4 Cytochrome bo(3) ubiquinol oxidase subunit 1 (EC 7.1.1.3) (Cytochrome o ubiquinol oxidase subunit 1) (Oxidase bo(3) subunit 1) (Ubiquinol oxidase polypeptide I) (Ubiquinol oxidase subunit 1) 0.969 72 663 GO:0004129
GO:0005886
GO:0009060
GO:0009486
GO:0015990
GO:0016682
GO:0020037
GO:0022904
AF-A0A172UXP0-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9668 389 530 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-A0A359KEF2-F1-model_v4 Cytochrome o ubiquinol oxidase subunit I 0.9617 51 289 GO:0004129
GO:0005886
GO:0009060
GO:0009486
GO:0015990
GO:0020037
GO:0022904
AF-W7W9S8-F1-model_v4 Ubiquinol oxidase subunit 1 (EC 1.10.3.-) 0.9599 89 327 GO:0004129
GO:0005886
GO:0009060
GO:0009486
GO:0015990
GO:0020037
GO:0022904
AF-A0A4Q5QFH7-F1-model_v4 Cytochrome o ubiquinol oxidase subunit I 0.9548 121 505 GO:0004129
GO:0005886
GO:0009060
GO:0009486
GO:0015990
GO:0020037
GO:0022904

Feature Viewer

pLDDT pTM Quality
84.54 0.9 High
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Predicted Structure (AlphaFold2)

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