F395931

General Info

Members Datasets Scaffolds Average Seq Length
301 199 602 264

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10006957|Ga0213875_100069575
Length 321
Sequence MLHAPSLNGTIATCLTAGQGQGPRPKGRAQREALRPSRPSCTMITPFGSIGRENDMPITHNTALCKLRDGGLALGFGVHHLRSTATPMLAKAAGYDWLFIDTEHGAHTIQEATQLCLAALPTGVAPIVRVCRDALDEGTRALDNGALGIVVPHVDTAEHAQRIAAAFRFPPLGHRSWGGPPAIYGFQPPPVAQAQEEINREILVCAMLETPQAIDNADAIAAVDGIDSLMIGTSDLSAEMGISGQIGHERIQVAYGKLAEACRRHGKFMGMGGVYDEQWASRYIAMGARLALGGSDHAMLLAAASARLKFLRSVEPKVKRD

Samples

Sample ID Description Type Environment
1 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
81 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
117 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
118 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
119 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
120 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
121 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
122 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
123 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
124 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
125 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
126 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
127 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
128 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
129 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
130 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
131 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
132 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
133 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
134 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
135 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
136 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
137 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
139 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
140 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
141 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
142 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
143 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
144 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
145 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
146 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
147 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
148 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
149 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
153 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
154 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
162 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
171 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
172 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
173 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
174 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
177 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
180 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
181 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
182 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
183 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
184 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
185 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
186 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
189 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
190 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
191 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
192 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
193 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
194 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
195 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
196 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
197 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
198 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
199 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.67
Metatranscriptomes 0.66
Isolates 0.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.99
Nodule 0
Rhizoplane 3.32
Rhizosphere 89.7
Stem 0
Stem Tuber 0
Unclassified 11.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213875_10006957 3300021388 Bacteria 5887
2 rootH1_10058417 3300003323 Bacteria 1887
3 Ga0070658_10109404 3300005327 Bacteria 2288
4 Ga0068869_100338420 3300005334 Unclassified 1224
5 Ga0070680_100011561 3300005336 Bacteria 6834
6 Ga0070680_100012283 3300005336 Bacteria 6650
7 Ga0070660_100021819 3300005339 Bacteria 4727
8 Ga0070660_100178904 3300005339 Bacteria 1716
9 Ga0070691_10036170 3300005341 Bacteria 2327
10 Ga0070687_100148663 3300005343 Unclassified 1372
11 Ga0070687_100286098 3300005343 Unclassified 1040
12 Ga0070661_100212588 3300005344 Bacteria 1481
13 Ga0070692_10031738 3300005345 Bacteria 2650
14 Ga0070668_100143465 3300005347 Bacteria 1926
15 Ga0070668_100579594 3300005347 Unclassified 979
16 Ga0070669_100126015 3300005353 Bacteria 1959
17 Ga0070675_100193924 3300005354 Bacteria 1761
18 Ga0070674_100101702 3300005356 Bacteria 2095
19 Ga0070659_100309414 3300005366 Bacteria 1319
20 Ga0070703_10001535 3300005406 Bacteria 6889
21 Ga0070713_100221932 3300005436 Bacteria 1715
22 Ga0070705_100000415 3300005440 Bacteria 24569
23 Ga0070700_100006029 3300005441 Bacteria 6451
24 Ga0070700_100027033 3300005441 Bacteria 3398
25 Ga0070700_100327447 3300005441 Bacteria 1128
26 Ga0070694_100004365 3300005444 Bacteria 8504
27 Ga0070694_100021918 3300005444 Bacteria 4088
28 Ga0070708_100068513 3300005445 Bacteria 3190
29 Ga0070678_100062528 3300005456 Bacteria 2749
30 Ga0070678_100136552 3300005456 Bacteria 1956
31 Ga0070681_10065119 3300005458 Bacteria 3614
32 Ga0070681_10104996 3300005458 Bacteria 2767
33 Ga0070681_10175747 3300005458 Bacteria 2063
34 Ga0070681_10398727 3300005458 Unclassified 1287
35 Ga0068867_100127766 3300005459 Bacteria 1972
36 Ga0070706_100098626 3300005467 Unclassified 2715
37 Ga0070699_100001673 3300005518 Bacteria 20205
38 Ga0070679_100262422 3300005530 Bacteria 1682
39 Ga0070697_100009987 3300005536 Bacteria 7407
40 Ga0070672_100179582 3300005543 Bacteria 1763
41 Ga0070695_100001433 3300005545 Bacteria 13225
42 Ga0070695_100086056 3300005545 Bacteria 2088
43 Ga0070696_100512441 3300005546 Bacteria 956
44 Ga0070704_100052814 3300005549 Bacteria 2869
45 Ga0068855_100053367 3300005563 Bacteria 4756
46 Ga0068855_100355831 3300005563 Bacteria 1612
47 Ga0068855_100414003 3300005563 Bacteria 1475
48 Ga0068857_100002616 3300005577 Bacteria 14779
49 Ga0068854_100245343 3300005578 Bacteria 1428
50 Ga0068856_100083923 3300005614 Bacteria 3164
51 Ga0068856_100107640 3300005614 Bacteria 2783
52 Ga0068856_100514871 3300005614 Bacteria 1218
53 Ga0068852_100149889 3300005616 Bacteria 2168
54 Ga0068859_100009018 3300005617 Bacteria 10075
55 Ga0068859_100413193 3300005617 Bacteria 1445
56 Ga0068859_100990729 3300005617 Bacteria 923
57 Ga0068864_100347024 3300005618 Bacteria 1399
58 Ga0068861_100286353 3300005719 Bacteria 1421
59 Ga0068858_100358878 3300005842 Bacteria 1397
60 Ga0068860_100008018 3300005843 Bacteria 10532
61 Ga0068862_100004731 3300005844 Bacteria 11462
62 Ga0068862_100586392 3300005844 Unclassified 1069
63 Ga0081455_10001509 3300005937 Bacteria 28740
64 Ga0081540_1029457 3300005983 Bacteria 3057
65 Ga0081539_10000059 3300005985 Bacteria 254888
66 Ga0081539_10002527 3300005985 Bacteria 25540
67 Ga0075365_10033451 3300006038 Bacteria 3313
68 Ga0075363_100110140 3300006048 Bacteria 1530
69 Ga0075364_10010413 3300006051 Bacteria 5616
70 Ga0075370_10017948 3300006353 Bacteria 3831
71 Ga0075428_100001081 3300006844 Bacteria 28974
72 Ga0075428_100092442 3300006844 Bacteria 3298
73 Ga0075428_100215050 3300006844 Bacteria 2077
74 Ga0075428_100251158 3300006844 Bacteria 1906
75 Ga0075428_100734869 3300006844 Bacteria 1051
76 Ga0075430_100112835 3300006846 Bacteria 2266
77 Ga0075431_100000032 3300006847 Bacteria 72293
78 Ga0075431_100028552 3300006847 Bacteria 5736
79 Ga0075433_10001904 3300006852 Bacteria 15702
80 Ga0075433_10126232 3300006852 Bacteria 2272
81 Ga0075434_100008635 3300006871 Bacteria 9490
82 Ga0075429_100001300 3300006880 Bacteria 20344
83 Ga0075429_100090898 3300006880 Bacteria 2663
84 Ga0097620_100009018 3300006931 Bacteria 10075
85 Ga0097620_100413221 3300006931 Bacteria 1445
86 Ga0097620_100990692 3300006931 Bacteria 923
87 Ga0075435_100048518 3300007076 Bacteria 3412
88 Ga0099795_10082325 3300007788 Bacteria 1234
89 Ga0105240_10683727 3300009093 Bacteria 1122
90 Ga0111539_10001296 3300009094 Bacteria 33381
91 Ga0111539_10002363 3300009094 Bacteria 25086
92 Ga0111539_10017072 3300009094 Bacteria 8985
93 Ga0111539_10042596 3300009094 Bacteria 5449
94 Ga0111539_10138674 3300009094 Bacteria 2848
95 Ga0111539_10465769 3300009094 Bacteria 1471
96 Ga0105245_10141890 3300009098 Unclassified 2263
97 Ga0105245_10298234 3300009098 Bacteria 1581
98 Ga0105245_10460626 3300009098 Bacteria 1282
99 Ga0105245_10476514 3300009098 Bacteria 1261
100 Ga0114129_10000062 3300009147 Bacteria 96507
101 Ga0114129_11000149 3300009147 Bacteria 1053
102 Ga0105243_10408501 3300009148 Bacteria 1263
103 Ga0105248_10164079 3300009177 Bacteria 2505
104 Ga0105249_10002066 3300009553 Bacteria 17401
105 Ga0099796_10037105 3300010159 Bacteria 1627
106 Ga0105239_10201259 3300010375 Bacteria 2231
107 Ga0105246_10247047 3300011119 Unclassified 1414
108 Ga0157370_10029317 3300013104 Bacteria 5403
109 Ga0157369_10120589 3300013105 Bacteria 2783
110 Ga0157378_10439527 3300013297 Bacteria 1293
111 Ga0157375_10039758 3300013308 Bacteria 4529
112 Ga0163163_10047641 3300014325 Bacteria 4214
113 Ga0163163_10066283 3300014325 Bacteria 3586
114 Ga0163163_10095994 3300014325 Bacteria 2985
115 Ga0157377_10305188 3300014745 Unclassified 1052
116 Ga0157379_10126330 3300014968 Bacteria 2301
117 Ga0157376_10077175 3300014969 Bacteria 2849
118 Ga0157376_10284797 3300014969 Bacteria 1558
119 Ga0157376_10374795 3300014969 Unclassified 1369
120 Ga0163161_10243469 3300017792 Bacteria 1399
121 Ga0163161_10446349 3300017792 Bacteria 1045
122 Ga0206356_10161480 3300020070 Bacteria 2377
123 Ga0206354_11331498 3300020081 Bacteria 1616
124 Ga0207682_10001519 3300025893 Bacteria 10697
125 Ga0207680_10361818 3300025903 Bacteria 1020
126 Ga0207705_10018258 3300025909 Bacteria 5016
127 Ga0207705_10034198 3300025909 Bacteria 3634
128 Ga0207684_10088565 3300025910 Bacteria 2637
129 Ga0207707_10006525 3300025912 Bacteria 10186
130 Ga0207707_10101752 3300025912 Bacteria 2511
131 Ga0207693_10028987 3300025915 Bacteria 4375
132 Ga0207660_10008004 3300025917 Bacteria 6833
133 Ga0207660_10012643 3300025917 Bacteria 5527
134 Ga0207662_10156359 3300025918 Bacteria 1454
135 Ga0207657_10053216 3300025919 Bacteria 3507
136 Ga0207657_10280502 3300025919 Bacteria 1323
137 Ga0207649_10175873 3300025920 Bacteria 1495
138 Ga0207652_10023363 3300025921 Bacteria 5121
139 Ga0207652_10042542 3300025921 Bacteria 3867
140 Ga0207681_10086646 3300025923 Bacteria 2226
141 Ga0207694_10029233 3300025924 Bacteria 4204
142 Ga0207659_10165817 3300025926 Unclassified 1739
143 Ga0207659_10239015 3300025926 Bacteria 1468
144 Ga0207687_10212987 3300025927 Bacteria 1517
145 Ga0207700_10328292 3300025928 Unclassified 1327
146 Ga0207644_10091101 3300025931 Bacteria 2273
147 Ga0207706_10463773 3300025933 Bacteria 1095
148 Ga0207670_10086815 3300025936 Bacteria 2202
149 Ga0207670_10117028 3300025936 Bacteria 1931
150 Ga0207689_10333870 3300025942 Unclassified 1259
151 Ga0207667_10015276 3300025949 Bacteria 8731
152 Ga0207667_10076640 3300025949 Bacteria 3469
153 Ga0207667_10091474 3300025949 Bacteria 3143
154 Ga0207712_10005280 3300025961 Bacteria 8162
155 Ga0207640_10324452 3300025981 Bacteria 1227
156 Ga0207678_10035106 3300026067 Bacteria 4366
157 Ga0207708_10001813 3300026075 Bacteria 15767
158 Ga0207708_10044059 3300026075 Bacteria 3400
159 Ga0207702_10012431 3300026078 Bacteria 7085
160 Ga0207648_10137671 3300026089 Bacteria 2151
161 Ga0207676_10042828 3300026095 Bacteria 3482
162 Ga0207674_10002489 3300026116 Bacteria 23224
163 Ga0207675_100026296 3300026118 Bacteria 5418
164 Ga0207683_10008180 3300026121 Bacteria 8949
165 Ga0207698_10054572 3300026142 Bacteria 3075
166 Ga0207698_10094726 3300026142 Bacteria 2456
167 Ga0207428_10006224 3300027907 Bacteria 11028
168 Ga0207428_10012592 3300027907 Bacteria 7418
169 Ga0207428_10020009 3300027907 Bacteria 5700
170 Ga0207428_10130678 3300027907 Unclassified 1921
171 Ga0268265_10002314 3300028380 Bacteria 14497
172 Ga0268265_10303771 3300028380 Bacteria 1438
173 Ga0268264_10003102 3300028381 Bacteria 14386
174 Ga0265337_1000131 3300028556 Bacteria 38040
175 Ga0265318_10016150 3300028577 Unclassified 3089
176 Ga0265325_10031649 3300031241 Bacteria 2829
177 Ga0265325_10122882 3300031241 Unclassified 1249
178 Ga0265329_10042849 3300031242 Unclassified 1448
179 Ga0265340_10005522 3300031247 Bacteria 7014
180 Ga0265339_10091933 3300031249 Unclassified 1589
181 Ga0265316_10122736 3300031344 Bacteria 1961
182 Ga0307508_10326631 3300031616 Bacteria 1126
183 Ga0265314_10016620 3300031711 Bacteria 5804
184 Ga0265342_10000687 3300031712 Bacteria 35389
185 Ga0307415_100088927 3300032126 Bacteria 2230
186 Ga0373948_0017913 3300034817 Unclassified 1325
187 Ga0373926_0011746 3300035083 Bacteria 2953
188 Ga0373940_0013079 3300035088 Bacteria 1999
189 Ga0373960_0016557 3300035121 Bacteria 1899
190 Ga0373955_0189052 3300035172 Bacteria 1224
191 Ga0373942_0053156 3300035207 Unclassified 1142
192 Ga0373924_0106135 3300035410 Bacteria 1211
193 Ga0373931_0002038 3300035691 Bacteria 8891
194 Ga0373931_0011935 3300035691 Bacteria 4203
195 Ga0373927_0036988 3300035695 Bacteria 3173
196 Ga0373937_0012545 3300036401 Bacteria 7456
197 Ga0373937_0043121 3300036401 Bacteria 4117
198 Ga0373937_0426028 3300036401 Bacteria 1260
199 Ga0373937_0639827 3300036401 Bacteria 1009
200 Ga0373925_0145800 3300037068 Bacteria 1856
201 Ga0373925_0491767 3300037068 Unclassified 1007
202 Ga0395900_0860171 3300037418 Unclassified 832
203 Ga0436364_0011823 3300037853 Bacteria 1046
204 Ga0436364_1010407 3300037853 Bacteria 7310
205 Ga0395901_0324046 3300038443 Unclassified 1594
206 Ga0436365_0402354 3300039437 Bacteria 1330
207 Ga0436365_1465833 3300039437 Bacteria 4385
208 Ga0466958_0124185 3300045836 Unclassified 1618
209 Ga0466967_0157485 3300045976 Bacteria 2129
210 Ga0495584_0025135 3300046491 Bacteria 3019
211 Ga0495606_0000234 3300046507 Bacteria 98166
212 Ga0495586_0165117 3300046535 Bacteria 1250
213 Ga0495598_0031844 3300046537 Bacteria 1486
214 Ga0495621_0069283 3300046539 Bacteria 1296
215 Ga0495656_0065692 3300046615 Bacteria 1596
216 Ga0495625_0083481 3300046660 Bacteria 2221
217 Ga0495674_0428599 3300047319 Bacteria 1065
218 Ga0495677_0121656 3300047445 Bacteria 996
219 Ga0495684_0090698 3300047471 Bacteria 2315
220 Ga0495615_0003211 3300048090 Bacteria 2712
221 Ga0496102_0004180 3300048905 Bacteria 12212
222 Ga0496102_0479820 3300048905 Bacteria 1165
223 Ga0496103_0010570 3300048906 Bacteria 5464
224 Ga0496106_0012569 3300048909 Bacteria 6251
225 Ga0496107_0014532 3300048910 Bacteria 5511
226 Ga0496109_0115284 3300048912 Unclassified 2500
227 Ga0496112_0000051 3300048915 Bacteria 82351
228 Ga0496114_0363245 3300048917 Bacteria 1281
229 Ga0496115_0024823 3300048918 Bacteria 4662
230 Ga0496115_0095623 3300048918 Bacteria 2432
231 Ga0501034_0181768 3300049571 Bacteria 2068
232 Ga0501039_0203959 3300049575 Unclassified 1555
233 Ga0501040_0111810 3300049576 Unclassified 1910
234 Ga0501040_0323488 3300049576 Bacteria 1103
235 Ga0501041_0075903 3300049577 Unclassified 2068
236 Ga0501041_0183813 3300049577 Unclassified 1309
237 Ga0501046_0043810 3300049580 Bacteria 3561
238 Ga0501047_0191466 3300049581 Bacteria 1908
239 Ga0501048_0108902 3300049582 Unclassified 1956
240 Ga0501048_0390659 3300049582 Bacteria 994
241 Ga0501072_0090636 3300049588 Unclassified 2427
242 Ga0501072_0285556 3300049588 Bacteria 1312
243 Ga0501074_0055798 3300049590 Bacteria 2847
244 Ga0501074_0244431 3300049590 Bacteria 1276
245 Ga0501075_0120100 3300049591 Bacteria 2000
246 Ga0501076_0057796 3300049592 Bacteria 3081
247 Ga0501076_0100514 3300049592 Bacteria 2330
248 Ga0501076_0356166 3300049592 Bacteria 1202
249 Ga0501077_0021997 3300049593 Bacteria 4038
250 Ga0501077_0091632 3300049593 Bacteria 1926
251 Ga0501079_0013104 3300049741 Bacteria 6322
252 Ga0501079_0076538 3300049741 Bacteria 2588
253 Ga0501079_0203109 3300049741 Unclassified 1548
254 Ga0501079_0231210 3300049741 Bacteria 1444
255 Ga0501081_0028547 3300049743 Bacteria 3766
256 Ga0501081_0336377 3300049743 Bacteria 1111
257 Ga0501083_0025447 3300049744 Bacteria 4098
258 Ga0501083_0114539 3300049744 Bacteria 1771
259 Ga0501045_0023443 3300049824 Bacteria 4425
260 Ga0501045_0055367 3300049824 Bacteria 2901
261 Ga0501045_0134125 3300049824 Bacteria 1841
262 nmdc:mga03n38_2217_c1 3300050490 Bacteria 5932
263 nmdc:mga0yw44_138740_c1 3300050492 Bacteria 1579
264 nmdc:mga06z11_12532_c1 3300050494 Bacteria 3690
265 nmdc:mga07m45_22111_c1 3300050496 Bacteria 3470
266 nmdc:mga05p37_172390_c1 3300050507 Unclassified 2638
267 nmdc:mga05p37_39372_c1 3300050507 Bacteria 5803
268 nmdc:mga05p37_564_c1 3300050507 Bacteria 40786
269 nmdc:mga05p37_774333_c1 3300050507 Bacteria 1054
270 nmdc:mga09592_2464_c1 3300050508 Bacteria 14940
271 nmdc:mga09592_325993_c1 3300050508 Bacteria 1330
272 nmdc:mga09592_528860_c1 3300050508 Bacteria 1014
273 nmdc:mga09592_9069_c1 3300050508 Bacteria 8088
274 nmdc:mga0qj67_266214_c1 3300050509 Bacteria 1390
275 nmdc:mga0qj67_40624_c1 3300050509 Bacteria 3656
276 nmdc:mga06r32_1286_c1 3300050510 Bacteria 22594
277 nmdc:mga06r32_154982_c1 3300050510 Bacteria 2272
278 nmdc:mga06r32_42130_c1 3300050510 Bacteria 4340
279 nmdc:mga08y16_12389_c1 3300050511 Bacteria 8968
280 nmdc:mga08y16_201417_c1 3300050511 Bacteria 2063
281 nmdc:mga08y16_210507_c1 3300050511 Bacteria 2014
282 nmdc:mga08y16_238980_c1 3300050511 Bacteria 1878
283 nmdc:mga08y16_47324_c1 3300050511 Bacteria 4501
284 nmdc:mga08y16_75458_c1 3300050511 Bacteria 3515
285 nmdc:mga08y16_89_c1 3300050511 Bacteria 76793
286 nmdc:mga0n895_17964_c1 3300050512 Bacteria 6536
287 nmdc:mga0n895_458159_c1 3300050512 Bacteria 1287
288 nmdc:mga0a205_2038_c1 3300050515 Bacteria 17644
289 Ga0495601_0081477 3300053077 Bacteria 2077
290 Ga0495619_0035031 3300053085 Unclassified 3264
291 Ga0500642_0125377 3300053130 Bacteria 1203
292 Ga0500658_0038636 3300053134 Bacteria 1904
293 Ga0500568_0019044 3300053139 Bacteria 2993
294 Ga0500568_0025815 3300053139 Bacteria 2473
295 Ga0501084_0150375 3300054114 Bacteria 1962
296 Ga0501084_0399827 3300054114 Unclassified 1161
297 Ga0501082_0000074 3300060353 Bacteria 73246
298 Ga0501082_0032304 3300060353 Bacteria 4514
299 Ga0530510_0050372 3300061734 Bacteria 3008
300 2929203938 2929199973 Bacteria 7260745
301 8055912956 8055909800 Bacteria 7278581
302 Ga0213875_10006957
303 rootH1_10058417
304 Ga0070658_10109404
305 Ga0068869_100338420
306 Ga0070680_100011561
307 Ga0070680_100012283
308 Ga0070660_100021819
309 Ga0070660_100178904
310 Ga0070691_10036170
311 Ga0070687_100148663
312 Ga0070687_100286098
313 Ga0070661_100212588
314 Ga0070692_10031738
315 Ga0070668_100143465
316 Ga0070668_100579594
317 Ga0070669_100126015
318 Ga0070675_100193924
319 Ga0070674_100101702
320 Ga0070659_100309414
321 Ga0070703_10001535
322 Ga0070713_100221932
323 Ga0070705_100000415
324 Ga0070700_100006029
325 Ga0070700_100027033
326 Ga0070700_100327447
327 Ga0070694_100004365
328 Ga0070694_100021918
329 Ga0070708_100068513
330 Ga0070678_100062528
331 Ga0070678_100136552
332 Ga0070681_10065119
333 Ga0070681_10104996
334 Ga0070681_10175747
335 Ga0070681_10398727
336 Ga0068867_100127766
337 Ga0070706_100098626
338 Ga0070699_100001673
339 Ga0070679_100262422
340 Ga0070697_100009987
341 Ga0070672_100179582
342 Ga0070695_100001433
343 Ga0070695_100086056
344 Ga0070696_100512441
345 Ga0070704_100052814
346 Ga0068855_100053367
347 Ga0068855_100355831
348 Ga0068855_100414003
349 Ga0068857_100002616
350 Ga0068854_100245343
351 Ga0068856_100083923
352 Ga0068856_100107640
353 Ga0068856_100514871
354 Ga0068852_100149889
355 Ga0068859_100009018
356 Ga0068859_100413193
357 Ga0068859_100990729
358 Ga0068864_100347024
359 Ga0068861_100286353
360 Ga0068858_100358878
361 Ga0068860_100008018
362 Ga0068862_100004731
363 Ga0068862_100586392
364 Ga0081455_10001509
365 Ga0081540_1029457
366 Ga0081539_10000059
367 Ga0081539_10002527
368 Ga0075365_10033451
369 Ga0075363_100110140
370 Ga0075364_10010413
371 Ga0075370_10017948
372 Ga0075428_100001081
373 Ga0075428_100092442
374 Ga0075428_100215050
375 Ga0075428_100251158
376 Ga0075428_100734869
377 Ga0075430_100112835
378 Ga0075431_100000032
379 Ga0075431_100028552
380 Ga0075433_10001904
381 Ga0075433_10126232
382 Ga0075434_100008635
383 Ga0075429_100001300
384 Ga0075429_100090898
385 Ga0097620_100009018
386 Ga0097620_100413221
387 Ga0097620_100990692
388 Ga0075435_100048518
389 Ga0099795_10082325
390 Ga0105240_10683727
391 Ga0111539_10001296
392 Ga0111539_10002363
393 Ga0111539_10017072
394 Ga0111539_10042596
395 Ga0111539_10138674
396 Ga0111539_10465769
397 Ga0105245_10141890
398 Ga0105245_10298234
399 Ga0105245_10460626
400 Ga0105245_10476514
401 Ga0114129_10000062
402 Ga0114129_11000149
403 Ga0105243_10408501
404 Ga0105248_10164079
405 Ga0105249_10002066
406 Ga0099796_10037105
407 Ga0105239_10201259
408 Ga0105246_10247047
409 Ga0157370_10029317
410 Ga0157369_10120589
411 Ga0157378_10439527
412 Ga0157375_10039758
413 Ga0163163_10047641
414 Ga0163163_10066283
415 Ga0163163_10095994
416 Ga0157377_10305188
417 Ga0157379_10126330
418 Ga0157376_10077175
419 Ga0157376_10284797
420 Ga0157376_10374795
421 Ga0163161_10243469
422 Ga0163161_10446349
423 Ga0206356_10161480
424 Ga0206354_11331498
425 Ga0207682_10001519
426 Ga0207680_10361818
427 Ga0207705_10018258
428 Ga0207705_10034198
429 Ga0207684_10088565
430 Ga0207707_10006525
431 Ga0207707_10101752
432 Ga0207693_10028987
433 Ga0207660_10008004
434 Ga0207660_10012643
435 Ga0207662_10156359
436 Ga0207657_10053216
437 Ga0207657_10280502
438 Ga0207649_10175873
439 Ga0207652_10023363
440 Ga0207652_10042542
441 Ga0207681_10086646
442 Ga0207694_10029233
443 Ga0207659_10165817
444 Ga0207659_10239015
445 Ga0207687_10212987
446 Ga0207700_10328292
447 Ga0207644_10091101
448 Ga0207706_10463773
449 Ga0207670_10086815
450 Ga0207670_10117028
451 Ga0207689_10333870
452 Ga0207667_10015276
453 Ga0207667_10076640
454 Ga0207667_10091474
455 Ga0207712_10005280
456 Ga0207640_10324452
457 Ga0207678_10035106
458 Ga0207708_10001813
459 Ga0207708_10044059
460 Ga0207702_10012431
461 Ga0207648_10137671
462 Ga0207676_10042828
463 Ga0207674_10002489
464 Ga0207675_100026296
465 Ga0207683_10008180
466 Ga0207698_10054572
467 Ga0207698_10094726
468 Ga0207428_10006224
469 Ga0207428_10012592
470 Ga0207428_10020009
471 Ga0207428_10130678
472 Ga0268265_10002314
473 Ga0268265_10303771
474 Ga0268264_10003102
475 Ga0265337_1000131
476 Ga0265318_10016150
477 Ga0265325_10031649
478 Ga0265325_10122882
479 Ga0265329_10042849
480 Ga0265340_10005522
481 Ga0265339_10091933
482 Ga0265316_10122736
483 Ga0307508_10326631
484 Ga0265314_10016620
485 Ga0265342_10000687
486 Ga0307415_100088927
487 Ga0373948_0017913
488 Ga0373926_0011746
489 Ga0373940_0013079
490 Ga0373960_0016557
491 Ga0373955_0189052
492 Ga0373942_0053156
493 Ga0373924_0106135
494 Ga0373931_0002038
495 Ga0373931_0011935
496 Ga0373927_0036988
497 Ga0373937_0012545
498 Ga0373937_0043121
499 Ga0373937_0426028
500 Ga0373937_0639827
501 Ga0373925_0145800
502 Ga0373925_0491767
503 Ga0395900_0860171
504 Ga0436364_0011823
505 Ga0436364_1010407
506 Ga0395901_0324046
507 Ga0436365_0402354
508 Ga0436365_1465833
509 Ga0466958_0124185
510 Ga0466967_0157485
511 Ga0495584_0025135
512 Ga0495606_0000234
513 Ga0495586_0165117
514 Ga0495598_0031844
515 Ga0495621_0069283
516 Ga0495656_0065692
517 Ga0495625_0083481
518 Ga0495674_0428599
519 Ga0495677_0121656
520 Ga0495684_0090698
521 Ga0495615_0003211
522 Ga0496102_0004180
523 Ga0496102_0479820
524 Ga0496103_0010570
525 Ga0496106_0012569
526 Ga0496107_0014532
527 Ga0496109_0115284
528 Ga0496112_0000051
529 Ga0496114_0363245
530 Ga0496115_0024823
531 Ga0496115_0095623
532 Ga0501034_0181768
533 Ga0501039_0203959
534 Ga0501040_0111810
535 Ga0501040_0323488
536 Ga0501041_0075903
537 Ga0501041_0183813
538 Ga0501046_0043810
539 Ga0501047_0191466
540 Ga0501048_0108902
541 Ga0501048_0390659
542 Ga0501072_0090636
543 Ga0501072_0285556
544 Ga0501074_0055798
545 Ga0501074_0244431
546 Ga0501075_0120100
547 Ga0501076_0057796
548 Ga0501076_0100514
549 Ga0501076_0356166
550 Ga0501077_0021997
551 Ga0501077_0091632
552 Ga0501079_0013104
553 Ga0501079_0076538
554 Ga0501079_0203109
555 Ga0501079_0231210
556 Ga0501081_0028547
557 Ga0501081_0336377
558 Ga0501083_0025447
559 Ga0501083_0114539
560 Ga0501045_0023443
561 Ga0501045_0055367
562 Ga0501045_0134125
563 nmdc:mga03n38_2217_c1
564 nmdc:mga0yw44_138740_c1
565 nmdc:mga06z11_12532_c1
566 nmdc:mga07m45_22111_c1
567 nmdc:mga05p37_172390_c1
568 nmdc:mga05p37_39372_c1
569 nmdc:mga05p37_564_c1
570 nmdc:mga05p37_774333_c1
571 nmdc:mga09592_2464_c1
572 nmdc:mga09592_325993_c1
573 nmdc:mga09592_528860_c1
574 nmdc:mga09592_9069_c1
575 nmdc:mga0qj67_266214_c1
576 nmdc:mga0qj67_40624_c1
577 nmdc:mga06r32_1286_c1
578 nmdc:mga06r32_154982_c1
579 nmdc:mga06r32_42130_c1
580 nmdc:mga08y16_12389_c1
581 nmdc:mga08y16_201417_c1
582 nmdc:mga08y16_210507_c1
583 nmdc:mga08y16_238980_c1
584 nmdc:mga08y16_47324_c1
585 nmdc:mga08y16_75458_c1
586 nmdc:mga08y16_89_c1
587 nmdc:mga0n895_17964_c1
588 nmdc:mga0n895_458159_c1
589 nmdc:mga0a205_2038_c1
590 Ga0495601_0081477
591 Ga0495619_0035031
592 Ga0500642_0125377
593 Ga0500658_0038636
594 Ga0500568_0019044
595 Ga0500568_0025815
596 Ga0501084_0150375
597 Ga0501084_0399827
598 Ga0501082_0000074
599 Ga0501082_0032304
600 Ga0530510_0050372
601 2929203938
602 8055912956

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03328

HpcH_HpaI

HpcH/HpaI aldolase/citrate lyase family

80

303

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4tv5-assembly1.cif.gz_A crystal structure of citrate synthase sbng 0.9041 2 260
3qz6-assembly1.cif.gz_A the crystal structure of hpch/hpai aldolase from desulfitobacterium hafniense dcb-2 0.902 2 257
4tv6-assembly1.cif.gz_A crystal structure of citrate synthase variant sbng e151q 0.9003 10 259
4tv5-assembly1.cif.gz_A crystal structure of citrate synthase sbng 0.8971 2 260
7nnk-assembly1.cif.gz_B crystal structure of s116a mutant of hydroxy ketone aldolase (swhka) from sphingomonas wittichii rw1 in complex with hydroxypyruvate 0.8931 2 256
ID Description Score Start End Superfamily
4tv5A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9041 2 260 3.20.20.60
4tv5A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8971 2 260 3.20.20.60
3qz6A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8923 10 257 3.20.20.60
4mf4F00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8832 6 256 3.20.20.60
1dxfA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8826 2 256 3.20.20.60
ID Description Score Start End GO Terms
AF-A0A5M6IPN6-F1-model_v4 Aldolase 0.9799 1 257 GO:0005737
GO:0016832
AF-A0A537V261-F1-model_v4 Aldolase 0.9769 29 257 GO:0005737
GO:0016832
AF-A0A355B7X1-F1-model_v4 Aldolase 0.976 6 256 GO:0005737
GO:0016832
AF-A0A3D9RH87-F1-model_v4 deleted 0.9737 5 255
AF-A0A537V0N0-F1-model_v4 Aldolase 0.9737 21 257 GO:0005737
GO:0016832

Map