F395371

General Info

Members Datasets Scaffolds Average Seq Length
300 173 297 191

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_11148372|Ga0157375_111483722
Length 203
Sequence MSQDLPAGARDLPVTAYALLGLLTFGDELTGYELKQRADNTLRFYWVAPAMSQIYTELTRLTEHGYVAPATTEGEGRRTTTYRITTAGERALREWIDESTVGFPTLKHTVLLRLLIGHASDPERMREVLEEYVAQLADALRDLRQVRDSLRRADAPGEPFFYPSVVADWGLDYFAAETRHTRRALARLADRAAILKLSQFVIR

Samples

Sample ID Description Type Environment
1 2643221641 Nocardioides sp. Root122 Isolate Unclassified
2 2739367898 Nocardioides sp. CF479 Isolate Unclassified
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
99 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
100 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
101 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
102 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
107 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
108 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
109 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
110 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
116 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
147 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
148 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
160 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
164 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
165 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
167 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
168 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
171 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
172 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
173 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.67
Metatranscriptomes 2.33
Isolates 1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4
Nodule 0.33
Rhizoplane 15.33
Rhizosphere 78.33
Stem 0
Stem Tuber 0
Unclassified 2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10012924 3300001979 Bacteria 3134
2 JGI24737J22298_10072875 3300001990 Bacteria 1025
3 JGI24735J21928_10076072 3300002067 Bacteria 961
4 Ga0070658_10055320 3300005327 Bacteria 3224
5 Ga0070658_10263931 3300005327 Bacteria 1463
6 Ga0070658_10390424 3300005327 Bacteria 1195
7 Ga0070683_100000365 3300005329 Bacteria 31299
8 Ga0070683_100375313 3300005329 Bacteria 1355
9 Ga0070683_100497894 3300005329 Bacteria 1164
10 Ga0068869_100075010 3300005334 Bacteria 2512
11 Ga0070680_100076297 3300005336 Bacteria 2759
12 Ga0070682_100049538 3300005337 Bacteria 2619
13 Ga0070682_100339708 3300005337 Bacteria 1116
14 Ga0070682_100826983 3300005337 Bacteria 755
15 Ga0068868_101053579 3300005338 Bacteria 746
16 Ga0070660_100069682 3300005339 Bacteria 2743
17 Ga0070660_100159678 3300005339 Bacteria 1816
18 Ga0070692_10034732 3300005345 Bacteria 2549
19 Ga0070659_100149765 3300005366 Bacteria 1903
20 Ga0070667_100160372 3300005367 Bacteria 1981
21 Ga0070714_100118458 3300005435 Bacteria 2352
22 Ga0070701_10363439 3300005438 Bacteria 907
23 Ga0070678_100130920 3300005456 Bacteria 1993
24 Ga0070681_10226068 3300005458 Bacteria 1786
25 Ga0070681_10411614 3300005458 Bacteria 1264
26 Ga0070681_10463140 3300005458 Bacteria 1180
27 Ga0070685_10027190 3300005466 Bacteria 3160
28 Ga0070679_100122983 3300005530 Bacteria 2578
29 Ga0070679_100158481 3300005530 Bacteria 2237
30 Ga0070679_100188412 3300005530 Bacteria 2032
31 Ga0070684_100003460 3300005535 Bacteria 11845
32 Ga0070684_100129145 3300005535 Bacteria 2279
33 Ga0070684_100317479 3300005535 Bacteria 1431
34 Ga0070684_100878128 3300005535 Bacteria 840
35 Ga0070686_100104851 3300005544 Bacteria 1916
36 Ga0070693_100295977 3300005547 Bacteria 1089
37 Ga0070665_100001179 3300005548 Bacteria 32016
38 Ga0070664_100045438 3300005564 Bacteria 3709
39 Ga0068857_100003876 3300005577 Bacteria 12596
40 Ga0068856_100104914 3300005614 Bacteria 2821
41 Ga0070702_100054464 3300005615 Bacteria 2302
42 Ga0068852_100055798 3300005616 Bacteria 3411
43 Ga0068852_101130081 3300005616 Bacteria 804
44 Ga0068864_100040731 3300005618 Bacteria 3973
45 Ga0068866_10126121 3300005718 Bacteria 1449
46 Ga0068861_100128770 3300005719 Bacteria 2052
47 Ga0068858_100135085 3300005842 Bacteria 2314
48 Ga0068858_100740976 3300005842 Bacteria 957
49 Ga0068860_100042036 3300005843 Bacteria 4368
50 Ga0068860_100178922 3300005843 Bacteria 2050
51 Ga0068862_101004667 3300005844 Bacteria 825
52 Ga0075365_10072014 3300006038 Bacteria 2328
53 Ga0075365_10215989 3300006038 Bacteria 1345
54 Ga0075365_10216266 3300006038 Bacteria 1344
55 Ga0075368_10018581 3300006042 Bacteria 2613
56 Ga0075364_10419087 3300006051 Bacteria 914
57 Ga0075364_10490342 3300006051 Bacteria 840
58 Ga0075367_10147236 3300006178 Bacteria 1461
59 Ga0068865_100079946 3300006881 Bacteria 2343
60 Ga0068865_100264139 3300006881 Bacteria 1364
61 Ga0105245_10014193 3300009098 Bacteria 6943
62 Ga0105245_11317363 3300009098 Bacteria 771
63 Ga0105241_10669463 3300009174 Bacteria 944
64 Ga0105242_10756835 3300009176 Bacteria 957
65 Ga0105248_10116496 3300009177 Bacteria 3013
66 Ga0105237_10205563 3300009545 Bacteria 1970
67 Ga0105249_10024699 3300009553 Bacteria 5402
68 Ga0105249_10346346 3300009553 Bacteria 1504
69 Ga0105239_10001015 3300010375 Bacteria 39219
70 Ga0105246_10012695 3300011119 Bacteria 5264
71 Ga0105246_10214170 3300011119 Bacteria 1505
72 Ga0157371_10675626 3300013102 Bacteria 772
73 Ga0157371_10822556 3300013102 Bacteria 701
74 Ga0157370_10809123 3300013104 Bacteria 852
75 Ga0157369_10206377 3300013105 Bacteria 2061
76 Ga0157372_10002484 3300013307 Bacteria 19989
77 Ga0157372_10246696 3300013307 Bacteria 2072
78 Ga0157372_10423500 3300013307 Bacteria 1551
79 Ga0157372_10472927 3300013307 Bacteria 1461
80 Ga0157372_10653529 3300013307 Bacteria 1224
81 Ga0157372_11070527 3300013307 Bacteria 933
82 Ga0157372_11254365 3300013307 Bacteria 856
83 Ga0157375_10004490 3300013308 Bacteria 12129
84 Ga0157375_10312172 3300013308 Bacteria 1737
85 Ga0157375_10516673 3300013308 Bacteria 1358
86 Ga0157375_11148372 3300013308 Bacteria 910
87 Ga0163163_10290675 3300014325 Bacteria 1686
88 Ga0163163_10313394 3300014325 Bacteria 1622
89 Ga0182008_10034603 3300014497 Bacteria 2532
90 Ga0157379_10005130 3300014968 Bacteria 11237
91 Ga0163161_10567890 3300017792 Bacteria 932
92 Ga0206356_11502845 3300020070 Bacteria 1729
93 Ga0206354_10006748 3300020081 Bacteria 1665
94 Ga0206354_10217912 3300020081 Bacteria 1089
95 Ga0206354_10278356 3300020081 Bacteria 1039
96 Ga0206353_10064013 3300020082 Bacteria 993
97 Ga0206353_11355270 3300020082 Bacteria 6291
98 Ga0206353_11690038 3300020082 Bacteria 863
99 Ga0207688_10076592 3300025901 Bacteria 1905
100 Ga0207647_10035913 3300025904 Bacteria 3153
101 Ga0207647_10115780 3300025904 Bacteria 1583
102 Ga0207705_10291700 3300025909 Bacteria 1250
103 Ga0207707_10361025 3300025912 Bacteria 1251
104 Ga0207660_10090437 3300025917 Bacteria 2268
105 Ga0207660_10135963 3300025917 Bacteria 1875
106 Ga0207657_10142974 3300025919 Bacteria 1954
107 Ga0207657_10223638 3300025919 Bacteria 1507
108 Ga0207649_10200368 3300025920 Bacteria 1410
109 Ga0207652_10089240 3300025921 Bacteria 2707
110 Ga0207652_10249947 3300025921 Bacteria 1599
111 Ga0207652_10351221 3300025921 Bacteria 1331
112 Ga0207659_10866106 3300025926 Bacteria 777
113 Ga0207664_10081941 3300025929 Bacteria 2627
114 Ga0207690_10016140 3300025932 Bacteria 4541
115 Ga0207704_10056493 3300025938 Bacteria 2405
116 Ga0207704_10476163 3300025938 Bacteria 1001
117 Ga0207661_10016748 3300025944 Bacteria 5411
118 Ga0207661_10108391 3300025944 Bacteria 2345
119 Ga0207661_10502563 3300025944 Bacteria 1108
120 Ga0207679_10103755 3300025945 Bacteria 2229
121 Ga0207712_10326964 3300025961 Bacteria 1267
122 Ga0207658_10050390 3300025986 Bacteria 3064
123 Ga0207677_10763754 3300026023 Bacteria 863
124 Ga0207703_10353572 3300026035 Bacteria 1353
125 Ga0207639_10046168 3300026041 Bacteria 3286
126 Ga0207702_10071919 3300026078 Bacteria 2979
127 Ga0207702_10588563 3300026078 Bacteria 1091
128 Ga0207674_10001716 3300026116 Bacteria 28034
129 Ga0207675_100137125 3300026118 Bacteria 2323
130 Ga0207683_10066419 3300026121 Bacteria 3180
131 Ga0207698_10040588 3300026142 Bacteria 3460
132 Ga0268266_10001751 3300028379 Bacteria 24833
133 Ga0268265_11101529 3300028380 Bacteria 788
134 Ga0268264_10036767 3300028381 Bacteria 4035
135 Ga0307405_10496045 3300031731 Bacteria 978
136 Ga0307413_10327592 3300031824 Bacteria 1173
137 Ga0307410_10327300 3300031852 Bacteria 1218
138 Ga0307412_10983196 3300031911 Bacteria 745
139 Ga0307409_100935547 3300031995 Bacteria 882
140 Ga0307416_100271687 3300032002 Bacteria 1665
141 Ga0395899_0065007 3300037312 Bacteria 2681
142 Ga0395900_0261290 3300037418 Bacteria 1729
143 Ga0395901_0009730 3300038443 Bacteria 9745
144 Ga0451807_0812044 3300041486 Bacteria 765
145 Ga0451845_0244625 3300041501 Bacteria 920
146 Ga0451849_0737397 3300041505 Bacteria 774
147 Ga0451843_0991535 3300041509 Bacteria 2706
148 Ga0451853_2308453 3300041512 Bacteria 1246
149 Ga0466966_0012496 3300044684 Bacteria 5624
150 Ga0466961_0236815 3300044693 Bacteria 1122
151 Ga0466963_0018375 3300044694 Bacteria 4371
152 Ga0466963_0092175 3300044694 Bacteria 2064
153 Ga0466963_0121829 3300044694 Bacteria 1796
154 Ga0466963_0488451 3300044694 Bacteria 869
155 Ga0466964_0042966 3300044706 Bacteria 1832
156 Ga0466971_0023414 3300044719 Bacteria 2753
157 Ga0466957_0065126 3300044842 Bacteria 2244
158 Ga0466959_0016464 3300045049 Bacteria 5403
159 Ga0466958_0045097 3300045836 Bacteria 2659
160 Ga0466967_0010978 3300045976 Bacteria 6829
161 Ga0466967_0024272 3300045976 Bacteria 4983
162 Ga0466967_0106562 3300045976 Bacteria 2569
163 Ga0466967_0458934 3300045976 Bacteria 1246
164 Ga0466967_0596335 3300045976 Bacteria 1090
165 Ga0495629_0147101 3300046459 Bacteria 1638
166 Ga0495641_0186613 3300046461 Bacteria 929
167 Ga0495653_0197708 3300046463 Bacteria 1367
168 Ga0495582_0466761 3300046473 Bacteria 729
169 Ga0495664_0119701 3300046477 Bacteria 1593
170 Ga0496100_0055923 3300048903 Bacteria 2580
171 Ga0496100_0480353 3300048903 Bacteria 956
172 Ga0496101_0008731 3300048904 Bacteria 6627
173 Ga0496101_0047596 3300048904 Bacteria 3079
174 Ga0496101_0167928 3300048904 Bacteria 1685
175 Ga0496101_0420703 3300048904 Bacteria 1053
176 Ga0496102_0008798 3300048905 Bacteria 8660
177 Ga0496102_0018096 3300048905 Bacteria 6185
178 Ga0496103_0022200 3300048906 Bacteria 3821
179 Ga0496103_0449179 3300048906 Bacteria 827
180 Ga0496104_0014225 3300048907 Bacteria 7182
181 Ga0496105_0001921 3300048908 Bacteria 14937
182 Ga0496105_0150237 3300048908 Bacteria 1915
183 Ga0496106_0330715 3300048909 Bacteria 1223
184 Ga0496106_0578305 3300048909 Bacteria 900
185 Ga0496107_0083934 3300048910 Bacteria 2323
186 Ga0496107_0095798 3300048910 Bacteria 2171
187 Ga0496107_0211795 3300048910 Bacteria 1441
188 Ga0496107_0808155 3300048910 Bacteria 686
189 Ga0496108_0010694 3300048911 Bacteria 7445
190 Ga0496108_0031065 3300048911 Bacteria 4429
191 Ga0496108_0354014 3300048911 Bacteria 1281
192 Ga0496109_0018201 3300048912 Bacteria 6169
193 Ga0496109_0085286 3300048912 Bacteria 2915
194 Ga0496109_0143637 3300048912 Bacteria 2232
195 Ga0496109_0154456 3300048912 Bacteria 2149
196 Ga0496109_0298786 3300048912 Bacteria 1518
197 Ga0496109_0334649 3300048912 Bacteria 1429
198 Ga0496110_0005744 3300048913 Bacteria 9743
199 Ga0496110_0332884 3300048913 Bacteria 1383
200 Ga0496110_0531169 3300048913 Bacteria 1070
201 Ga0496110_0611903 3300048913 Bacteria 988
202 Ga0496111_0019881 3300048914 Bacteria 4669
203 Ga0496113_0058012 3300048916 Bacteria 2912
204 Ga0496113_0130466 3300048916 Bacteria 1972
205 Ga0496113_0767014 3300048916 Bacteria 767
206 Ga0496114_0022735 3300048917 Bacteria 5110
207 Ga0496114_0024030 3300048917 Bacteria 4973
208 Ga0496114_0319549 3300048917 Bacteria 1371
209 Ga0496114_0427780 3300048917 Bacteria 1173
210 Ga0496114_0650013 3300048917 Bacteria 927
211 Ga0496114_0897110 3300048917 Bacteria 767
212 Ga0496115_0003254 3300048918 Bacteria 11657
213 Ga0496115_0009171 3300048918 Bacteria 7343
214 Ga0496115_0513714 3300048918 Bacteria 961
215 Ga0501031_0023295 3300049568 Bacteria 4038
216 Ga0501031_0028140 3300049568 Bacteria 3664
217 Ga0501031_0165165 3300049568 Bacteria 1447
218 Ga0501032_0071852 3300049569 Bacteria 2306
219 Ga0501032_0345345 3300049569 Bacteria 959
220 Ga0501033_0136175 3300049570 Bacteria 1777
221 Ga0501034_0431677 3300049571 Bacteria 1237
222 Ga0501036_0051137 3300049572 Bacteria 3499
223 Ga0501036_0065199 3300049572 Bacteria 3083
224 Ga0501036_0287305 3300049572 Bacteria 1376
225 Ga0501037_0261207 3300049573 Bacteria 1210
226 Ga0501037_0292366 3300049573 Bacteria 1133
227 Ga0501037_0680560 3300049573 Bacteria 686
228 Ga0501038_0058178 3300049574 Bacteria 3315
229 Ga0501039_0048715 3300049575 Bacteria 3275
230 Ga0501039_0112175 3300049575 Bacteria 2132
231 Ga0501039_0938626 3300049575 Bacteria 673
232 Ga0501040_0070757 3300049576 Bacteria 2408
233 Ga0501040_0118282 3300049576 Bacteria 1858
234 Ga0501040_0812059 3300049576 Bacteria 677
235 Ga0501041_0026185 3300049577 Bacteria 3507
236 Ga0501042_0024782 3300049578 Bacteria 4210
237 Ga0501042_0691069 3300049578 Bacteria 742
238 Ga0501046_0614295 3300049580 Bacteria 771
239 Ga0501047_0165119 3300049581 Bacteria 2085
240 Ga0501048_0030492 3300049582 Bacteria 3902
241 Ga0501048_0102576 3300049582 Bacteria 2019
242 Ga0501067_0001807 3300049583 Bacteria 11761
243 Ga0501067_0007776 3300049583 Bacteria 5963
244 Ga0501068_0028469 3300049584 Bacteria 3304
245 Ga0501068_0537335 3300049584 Bacteria 759
246 Ga0501069_0011680 3300049585 Bacteria 4655
247 Ga0501069_0064560 3300049585 Bacteria 2046
248 Ga0501069_0517187 3300049585 Bacteria 713
249 Ga0501070_0001455 3300049586 Bacteria 21188
250 Ga0501070_0030088 3300049586 Bacteria 4549
251 Ga0501070_0198768 3300049586 Bacteria 1647
252 Ga0501070_0233283 3300049586 Bacteria 1507
253 Ga0501071_0613563 3300049587 Bacteria 836
254 Ga0501071_0620742 3300049587 Bacteria 831
255 Ga0501072_0146136 3300049588 Bacteria 1885
256 Ga0501073_0006740 3300049589 Bacteria 8552
257 Ga0501073_0010052 3300049589 Bacteria 6957
258 Ga0501073_0039170 3300049589 Bacteria 3359
259 Ga0501074_0001379 3300049590 Bacteria 16119
260 Ga0501074_0026525 3300049590 Bacteria 4200
261 Ga0501074_0029387 3300049590 Bacteria 3981
262 Ga0501075_0130427 3300049591 Bacteria 1915
263 Ga0501076_0064769 3300049592 Bacteria 2913
264 Ga0501077_0018093 3300049593 Bacteria 4454
265 Ga0501077_0068214 3300049593 Bacteria 2254
266 Ga0501077_0101301 3300049593 Bacteria 1825
267 Ga0501079_0007504 3300049741 Bacteria 8248
268 Ga0501079_0510429 3300049741 Bacteria 945
269 Ga0501079_0551320 3300049741 Bacteria 906
270 Ga0501079_0588778 3300049741 Bacteria 875
271 Ga0501080_0057114 3300049742 Bacteria 3634
272 Ga0501080_0151848 3300049742 Bacteria 2140
273 Ga0501081_0101914 3300049743 Bacteria 2030
274 Ga0501083_0142473 3300049744 Bacteria 1569
275 Ga0501083_0385706 3300049744 Bacteria 911
276 Ga0501044_0500887 3300049823 Bacteria 1116
277 Ga0501045_0059635 3300049824 Bacteria 2796
278 Ga0501045_0110555 3300049824 Bacteria 2038
279 nmdc:mga00v17_191225_c1 3300050491 Bacteria 1322
280 nmdc:mga0yw44_146790_c1 3300050492 Bacteria 1536
281 nmdc:mga0yw44_210660_c1 3300050492 Bacteria 1285
282 nmdc:mga0yw44_56103_c1 3300050492 Bacteria 2398
283 nmdc:mga0yw44_74139_c1 3300050492 Bacteria 2119
284 nmdc:mga0n895_614249_c1 3300050512 Bacteria 1088
285 Ga0495601_0176004 3300053077 Bacteria 1399
286 Ga0495595_0110565 3300053084 Bacteria 1332
287 Ga0495619_0078481 3300053085 Bacteria 2220
288 Ga0495619_0662024 3300053085 Bacteria 711
289 Ga0501084_0038628 3300054114 Bacteria 3990
290 Ga0501084_0095080 3300054114 Bacteria 2502
291 Ga0501084_0209155 3300054114 Bacteria 1646
292 Ga0501082_0015881 3300060353 Bacteria 6475
293 Ga0501082_0130657 3300060353 Bacteria 2179
294 Ga0501082_0247164 3300060353 Bacteria 1553
295 Ga0466962_0018097 3300061719 Bacteria 3389
296 Ga0530510_0029833 3300061734 Bacteria 3916
297 Ga0530510_0170343 3300061734 Bacteria 1613

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048910 Ga0496107_0095798 Ga0496107_0095798_382_882 160
2 3300005842 Ga0068858_100740976 Ga0068858_1007409761 162
3 3300045976 Ga0466967_0024272 Ga0466967_0024272_1960_2472 169
4 3300048904 Ga0496101_0047596 Ga0496101_0047596_2497_3036 177
5 3300049574 Ga0501038_0058178 Ga0501038_0058178_317_856 178
6 3300049591 Ga0501075_0130427 Ga0501075_0130427_140_679 178
7 3300048913 Ga0496110_0531169 Ga0496110_0531169_78_680 179
8 3300031995 Ga0307409_100935547 Ga0307409_1009355471 180
9 3300046463 Ga0495653_0197708 Ga0495653_0197708_628_1173 180
10 3300046477 Ga0495664_0119701 Ga0495664_0119701_149_694 180
11 3300049575 Ga0501039_0938626 Ga0501039_0938626_76_639 180
12 3300049576 Ga0501040_0812059 Ga0501040_0812059_27_590 180
13 3300053077 Ga0495601_0176004 Ga0495601_0176004_460_1005 180
14 3300053085 Ga0495619_0662024 Ga0495619_0662024_119_664 180
15 3300020081 Ga0206354_10278356 Ga0206354_102783562 181
16 3300020082 Ga0206353_11355270 Ga0206353_113552704 181
17 3300005327 Ga0070658_10263931 Ga0070658_102639311 183
18 3300020081 Ga0206354_10006748 Ga0206354_100067483 183
19 3300037312 Ga0395899_0065007 Ga0395899_0065007_1151_1705 183
20 3300037418 Ga0395900_0261290 Ga0395900_0261290_1136_1690 183
21 3300038443 Ga0395901_0009730 Ga0395901_0009730_4784_5338 183
22 3300044684 Ga0466966_0012496 Ga0466966_0012496_1141_1695 183
23 3300044693 Ga0466961_0236815 Ga0466961_0236815_228_782 183
24 3300044694 Ga0466963_0092175 Ga0466963_0092175_1171_1725 183
25 3300044694 Ga0466963_0121829 Ga0466963_0121829_128_682 183
26 3300044694 Ga0466963_0488451 Ga0466963_0488451_279_833 183
27 3300044719 Ga0466971_0023414 Ga0466971_0023414_1020_1574 183
28 3300044842 Ga0466957_0065126 Ga0466957_0065126_1633_2187 183
29 3300045049 Ga0466959_0016464 Ga0466959_0016464_3931_4485 183
30 3300045836 Ga0466958_0045097 Ga0466958_0045097_942_1496 183
31 3300045976 Ga0466967_0596335 Ga0466967_0596335_357_911 183
32 3300061719 Ga0466962_0018097 Ga0466962_0018097_1729_2283 183
33 iso_pu_bacteria 8054609563 8054612411 183
34 3300005337 Ga0070682_100826983 Ga0070682_1008269831 184
35 3300005435 Ga0070714_100118458 Ga0070714_1001184583 184
36 3300005458 Ga0070681_10463140 Ga0070681_104631402 184
37 3300005530 Ga0070679_100158481 Ga0070679_1001584812 184
38 3300005535 Ga0070684_100878128 Ga0070684_1008781282 184
39 3300005616 Ga0068852_101130081 Ga0068852_1011300812 184
40 3300013102 Ga0157371_10822556 Ga0157371_108225561 184
41 3300013104 Ga0157370_10809123 Ga0157370_108091232 184
42 3300013307 Ga0157372_10246696 Ga0157372_102466962 184
43 3300013307 Ga0157372_10423500 Ga0157372_104235002 184
44 3300013307 Ga0157372_10472927 Ga0157372_104729271 184
45 3300013307 Ga0157372_11070527 Ga0157372_110705272 184
46 3300020070 Ga0206356_11502845 Ga0206356_115028452 184
47 3300020081 Ga0206354_10217912 Ga0206354_102179121 184
48 3300020082 Ga0206353_11690038 Ga0206353_116900382 184
49 3300025917 Ga0207660_10090437 Ga0207660_100904372 184
50 3300025919 Ga0207657_10223638 Ga0207657_102236382 184
51 3300025921 Ga0207652_10351221 Ga0207652_103512212 184
52 3300025929 Ga0207664_10081941 Ga0207664_100819413 184
53 3300031824 Ga0307413_10327592 Ga0307413_103275922 184
54 3300045976 Ga0466967_0458934 Ga0466967_0458934_161_733 184
55 3300048917 Ga0496114_0897110 Ga0496114_0897110_16_582 184
56 3300049568 Ga0501031_0028140 Ga0501031_0028140_2253_2810 184
57 3300049569 Ga0501032_0071852 Ga0501032_0071852_1149_1706 184
58 3300049570 Ga0501033_0136175 Ga0501033_0136175_1157_1714 184
59 3300049572 Ga0501036_0065199 Ga0501036_0065199_2105_2662 184
60 3300049575 Ga0501039_0048715 Ga0501039_0048715_2400_2957 184
61 3300049576 Ga0501040_0118282 Ga0501040_0118282_587_1144 184
62 3300049577 Ga0501041_0026185 Ga0501041_0026185_1684_2241 184
63 3300049578 Ga0501042_0024782 Ga0501042_0024782_2836_3393 184
64 3300049580 Ga0501046_0614295 Ga0501046_0614295_16_573 184
65 3300049581 Ga0501047_0165119 Ga0501047_0165119_701_1327 184
66 3300049582 Ga0501048_0030492 Ga0501048_0030492_2273_2830 184
67 3300049583 Ga0501067_0001807 Ga0501067_0001807_9665_10291 184
68 3300049584 Ga0501068_0028469 Ga0501068_0028469_366_992 184
69 3300049586 Ga0501070_0198768 Ga0501070_0198768_368_925 184
70 3300049586 Ga0501070_0233283 Ga0501070_0233283_105_731 184
71 3300049587 Ga0501071_0613563 Ga0501071_0613563_20_646 184
72 3300049588 Ga0501072_0146136 Ga0501072_0146136_656_1213 184
73 3300049589 Ga0501073_0006740 Ga0501073_0006740_660_1286 184
74 3300049590 Ga0501074_0001379 Ga0501074_0001379_1140_1766 184
75 3300049590 Ga0501074_0029387 Ga0501074_0029387_2219_2776 184
76 3300049592 Ga0501076_0064769 Ga0501076_0064769_954_1511 184
77 3300049593 Ga0501077_0068214 Ga0501077_0068214_12_638 184
78 3300049593 Ga0501077_0101301 Ga0501077_0101301_654_1211 184
79 3300049741 Ga0501079_0007504 Ga0501079_0007504_5442_5999 184
80 3300049741 Ga0501079_0551320 Ga0501079_0551320_92_718 184
81 3300049742 Ga0501080_0151848 Ga0501080_0151848_389_1015 184
82 3300049743 Ga0501081_0101914 Ga0501081_0101914_1115_1672 184
83 3300049823 Ga0501044_0500887 Ga0501044_0500887_371_997 184
84 3300049824 Ga0501045_0110555 Ga0501045_0110555_1056_1613 184
85 3300050512 nmdc:mga0n895_614249_c1 nmdc:mga0n895_614249_c1_119_694 184
86 3300054114 Ga0501084_0095080 Ga0501084_0095080_1595_2152 184
87 3300060353 Ga0501082_0015881 Ga0501082_0015881_4882_5508 184
88 3300060353 Ga0501082_0130657 Ga0501082_0130657_24_581 184
89 3300061734 Ga0530510_0029833 Ga0530510_0029833_2913_3470 184
90 iso_pu_bacteria 2643221641 2644231349 184
91 iso_pu_bacteria 2739367898 2740166672 184
92 3300006178 Ga0075367_10147236 Ga0075367_101472362 185
93 3300049571 Ga0501034_0431677 Ga0501034_0431677_148_774 185
94 3300054114 Ga0501084_0209155 Ga0501084_0209155_14_640 185
95 3300005337 Ga0070682_100339708 Ga0070682_1003397082 186
96 3300005719 Ga0068861_100128770 Ga0068861_1001287702 186
97 3300006038 Ga0075365_10215989 Ga0075365_102159892 186
98 3300006038 Ga0075365_10216266 Ga0075365_102162662 186
99 3300006051 Ga0075364_10490342 Ga0075364_104903422 186
100 3300006881 Ga0068865_100264139 Ga0068865_1002641392 186
101 3300009553 Ga0105249_10346346 Ga0105249_103463461 186
102 3300013307 Ga0157372_10653529 Ga0157372_106535292 186
103 3300013308 Ga0157375_10312172 Ga0157375_103121722 186
104 3300025938 Ga0207704_10056493 Ga0207704_100564932 186
105 3300025961 Ga0207712_10326964 Ga0207712_103269642 186
106 3300026078 Ga0207702_10588563 Ga0207702_105885631 186
107 3300026118 Ga0207675_100137125 Ga0207675_1001371253 186
108 3300041486 Ga0451807_0812044 Ga0451807_0812044_112_675 186
109 3300041501 Ga0451845_0244625 Ga0451845_0244625_58_621 186
110 3300041509 Ga0451843_0991535 Ga0451843_0991535_1286_1849 186
111 3300041512 Ga0451853_2308453 Ga0451853_2308453_337_900 186
112 3300048904 Ga0496101_0167928 Ga0496101_0167928_214_783 186
113 3300048906 Ga0496103_0449179 Ga0496103_0449179_25_594 186
114 3300048910 Ga0496107_0808155 Ga0496107_0808155_104_673 186
115 3300048912 Ga0496109_0085286 Ga0496109_0085286_1823_2392 186
116 3300048913 Ga0496110_0611903 Ga0496110_0611903_287_856 186
117 3300048916 Ga0496113_0767014 Ga0496113_0767014_68_637 186
118 3300048917 Ga0496114_0024030 Ga0496114_0024030_3645_4214 186
119 3300049568 Ga0501031_0023295 Ga0501031_0023295_3288_3851 186
120 3300049569 Ga0501032_0345345 Ga0501032_0345345_182_745 186
121 3300049572 Ga0501036_0051137 Ga0501036_0051137_2278_2841 186
122 3300049573 Ga0501037_0680560 Ga0501037_0680560_13_576 186
123 3300049578 Ga0501042_0691069 Ga0501042_0691069_70_633 186
124 3300049587 Ga0501071_0620742 Ga0501071_0620742_91_654 186
125 3300049824 Ga0501045_0059635 Ga0501045_0059635_263_826 186
126 3300050491 nmdc:mga00v17_191225_c1 nmdc:mga00v17_191225_c1_733_1296 186
127 3300050492 nmdc:mga0yw44_146790_c1 nmdc:mga0yw44_146790_c1_800_1363 186
128 3300050492 nmdc:mga0yw44_74139_c1 nmdc:mga0yw44_74139_c1_1323_1895 186
129 3300005530 Ga0070679_100188412 Ga0070679_1001884122 187
130 3300006042 Ga0075368_10018581 Ga0075368_100185813 187
131 3300006051 Ga0075364_10419087 Ga0075364_104190871 187
132 3300025921 Ga0207652_10249947 Ga0207652_102499471 187
133 3300031852 Ga0307410_10327300 Ga0307410_103273002 187
134 3300032002 Ga0307416_100271687 Ga0307416_1002716872 187
135 3300049585 Ga0501069_0517187 Ga0501069_0517187_48_641 187
136 3300001979 JGI24740J21852_10012924 JGI24740J21852_100129243 188
137 3300001990 JGI24737J22298_10072875 JGI24737J22298_100728752 188
138 3300002067 JGI24735J21928_10076072 JGI24735J21928_100760722 188
139 3300005327 Ga0070658_10055320 Ga0070658_100553202 188
140 3300005327 Ga0070658_10390424 Ga0070658_103904241 188
141 3300005329 Ga0070683_100000365 Ga0070683_10000036524 188
142 3300005329 Ga0070683_100375313 Ga0070683_1003753132 188
143 3300005329 Ga0070683_100497894 Ga0070683_1004978941 188
144 3300005334 Ga0068869_100075010 Ga0068869_1000750102 188
145 3300005336 Ga0070680_100076297 Ga0070680_1000762972 188
146 3300005337 Ga0070682_100049538 Ga0070682_1000495384 188
147 3300005338 Ga0068868_101053579 Ga0068868_1010535791 188
148 3300005339 Ga0070660_100069682 Ga0070660_1000696824 188
149 3300005339 Ga0070660_100159678 Ga0070660_1001596783 188
150 3300005345 Ga0070692_10034732 Ga0070692_100347322 188
151 3300005366 Ga0070659_100149765 Ga0070659_1001497653 188
152 3300005367 Ga0070667_100160372 Ga0070667_1001603722 188
153 3300005438 Ga0070701_10363439 Ga0070701_103634392 188
154 3300005456 Ga0070678_100130920 Ga0070678_1001309202 188
155 3300005458 Ga0070681_10226068 Ga0070681_102260682 188
156 3300005458 Ga0070681_10411614 Ga0070681_104116142 188
157 3300005466 Ga0070685_10027190 Ga0070685_100271902 188
158 3300005530 Ga0070679_100122983 Ga0070679_1001229832 188
159 3300005535 Ga0070684_100003460 Ga0070684_1000034604 188
160 3300005535 Ga0070684_100129145 Ga0070684_1001291452 188
161 3300005535 Ga0070684_100317479 Ga0070684_1003174791 188
162 3300005544 Ga0070686_100104851 Ga0070686_1001048513 188
163 3300005547 Ga0070693_100295977 Ga0070693_1002959771 188
164 3300005548 Ga0070665_100001179 Ga0070665_1000011792 188
165 3300005564 Ga0070664_100045438 Ga0070664_1000454381 188
166 3300005577 Ga0068857_100003876 Ga0068857_1000038766 188
167 3300005614 Ga0068856_100104914 Ga0068856_1001049143 188
168 3300005615 Ga0070702_100054464 Ga0070702_1000544643 188
169 3300005616 Ga0068852_100055798 Ga0068852_1000557982 188
170 3300005618 Ga0068864_100040731 Ga0068864_1000407312 188
171 3300005718 Ga0068866_10126121 Ga0068866_101261212 188
172 3300005842 Ga0068858_100135085 Ga0068858_1001350853 188
173 3300005843 Ga0068860_100042036 Ga0068860_1000420365 188
174 3300005843 Ga0068860_100178922 Ga0068860_1001789223 188
175 3300005844 Ga0068862_101004667 Ga0068862_1010046672 188
176 3300006038 Ga0075365_10072014 Ga0075365_100720142 188
177 3300006881 Ga0068865_100079946 Ga0068865_1000799464 188
178 3300009098 Ga0105245_10014193 Ga0105245_100141936 188
179 3300009098 Ga0105245_11317363 Ga0105245_113173631 188
180 3300009174 Ga0105241_10669463 Ga0105241_106694631 188
181 3300009176 Ga0105242_10756835 Ga0105242_107568352 188
182 3300009177 Ga0105248_10116496 Ga0105248_101164963 188
183 3300009545 Ga0105237_10205563 Ga0105237_102055632 188
184 3300009553 Ga0105249_10024699 Ga0105249_100246992 188
185 3300010375 Ga0105239_10001015 Ga0105239_1000101528 188
186 3300011119 Ga0105246_10012695 Ga0105246_100126953 188
187 3300011119 Ga0105246_10214170 Ga0105246_102141702 188
188 3300013102 Ga0157371_10675626 Ga0157371_106756261 188
189 3300013105 Ga0157369_10206377 Ga0157369_102063773 188
190 3300013307 Ga0157372_10002484 Ga0157372_1000248413 188
191 3300013307 Ga0157372_11254365 Ga0157372_112543651 188
192 3300013308 Ga0157375_10004490 Ga0157375_100044904 188
193 3300013308 Ga0157375_10516673 Ga0157375_105166731 188
194 3300013308 Ga0157375_11148372 Ga0157375_111483722 188
195 3300014325 Ga0163163_10290675 Ga0163163_102906752 188
196 3300014325 Ga0163163_10313394 Ga0163163_103133942 188
197 3300014497 Ga0182008_10034603 Ga0182008_100346033 188
198 3300014968 Ga0157379_10005130 Ga0157379_100051308 188
199 3300017792 Ga0163161_10567890 Ga0163161_105678902 188
200 3300020082 Ga0206353_10064013 Ga0206353_100640131 188
201 3300025901 Ga0207688_10076592 Ga0207688_100765922 188
202 3300025904 Ga0207647_10035913 Ga0207647_100359132 188
203 3300025904 Ga0207647_10115780 Ga0207647_101157802 188
204 3300025909 Ga0207705_10291700 Ga0207705_102917002 188
205 3300025912 Ga0207707_10361025 Ga0207707_103610252 188
206 3300025917 Ga0207660_10135963 Ga0207660_101359631 188
207 3300025919 Ga0207657_10142974 Ga0207657_101429742 188
208 3300025920 Ga0207649_10200368 Ga0207649_102003681 188
209 3300025921 Ga0207652_10089240 Ga0207652_100892402 188
210 3300025926 Ga0207659_10866106 Ga0207659_108661061 188
211 3300025932 Ga0207690_10016140 Ga0207690_100161403 188
212 3300025938 Ga0207704_10476163 Ga0207704_104761632 188
213 3300025944 Ga0207661_10016748 Ga0207661_100167483 188
214 3300025944 Ga0207661_10108391 Ga0207661_101083912 188
215 3300025944 Ga0207661_10502563 Ga0207661_105025632 188
216 3300025945 Ga0207679_10103755 Ga0207679_101037551 188
217 3300025986 Ga0207658_10050390 Ga0207658_100503903 188
218 3300026023 Ga0207677_10763754 Ga0207677_107637542 188
219 3300026035 Ga0207703_10353572 Ga0207703_103535722 188
220 3300026041 Ga0207639_10046168 Ga0207639_100461682 188
221 3300026078 Ga0207702_10071919 Ga0207702_100719194 188
222 3300026116 Ga0207674_10001716 Ga0207674_100017164 188
223 3300026121 Ga0207683_10066419 Ga0207683_100664194 188
224 3300026142 Ga0207698_10040588 Ga0207698_100405882 188
225 3300028379 Ga0268266_10001751 Ga0268266_100017516 188
226 3300028380 Ga0268265_11101529 Ga0268265_111015292 188
227 3300028381 Ga0268264_10036767 Ga0268264_100367675 188
228 3300031731 Ga0307405_10496045 Ga0307405_104960452 188
229 3300031911 Ga0307412_10983196 Ga0307412_109831962 188
230 3300041505 Ga0451849_0737397 Ga0451849_0737397_141_710 188
231 3300044694 Ga0466963_0018375 Ga0466963_0018375_1451_2041 188
232 3300044706 Ga0466964_0042966 Ga0466964_0042966_381_971 188
233 3300045976 Ga0466967_0010978 Ga0466967_0010978_5019_5609 188
234 3300045976 Ga0466967_0106562 Ga0466967_0106562_152_742 188
235 3300046459 Ga0495629_0147101 Ga0495629_0147101_558_1139 188
236 3300046461 Ga0495641_0186613 Ga0495641_0186613_217_807 188
237 3300046473 Ga0495582_0466761 Ga0495582_0466761_105_686 188
238 3300048903 Ga0496100_0055923 Ga0496100_0055923_863_1435 188
239 3300048903 Ga0496100_0480353 Ga0496100_0480353_148_729 188
240 3300048904 Ga0496101_0008731 Ga0496101_0008731_3500_4084 188
241 3300048904 Ga0496101_0420703 Ga0496101_0420703_157_729 188
242 3300048905 Ga0496102_0008798 Ga0496102_0008798_5757_6347 188
243 3300048905 Ga0496102_0018096 Ga0496102_0018096_3695_4279 188
244 3300048906 Ga0496103_0022200 Ga0496103_0022200_2009_2599 188
245 3300048907 Ga0496104_0014225 Ga0496104_0014225_3596_4180 188
246 3300048908 Ga0496105_0001921 Ga0496105_0001921_13576_14160 188
247 3300048908 Ga0496105_0150237 Ga0496105_0150237_439_1011 188
248 3300048909 Ga0496106_0330715 Ga0496106_0330715_430_1020 188
249 3300048909 Ga0496106_0578305 Ga0496106_0578305_227_811 188
250 3300048910 Ga0496107_0083934 Ga0496107_0083934_1075_1659 188
251 3300048910 Ga0496107_0211795 Ga0496107_0211795_671_1261 188
252 3300048911 Ga0496108_0010694 Ga0496108_0010694_6450_7040 188
253 3300048911 Ga0496108_0031065 Ga0496108_0031065_1085_1669 188
254 3300048911 Ga0496108_0354014 Ga0496108_0354014_338_922 188
255 3300048912 Ga0496109_0018201 Ga0496109_0018201_592_1182 188
256 3300048912 Ga0496109_0143637 Ga0496109_0143637_176_748 188
257 3300048912 Ga0496109_0154456 Ga0496109_0154456_518_1102 188
258 3300048912 Ga0496109_0298786 Ga0496109_0298786_915_1499 188
259 3300048912 Ga0496109_0334649 Ga0496109_0334649_99_683 188
260 3300048913 Ga0496110_0005744 Ga0496110_0005744_2054_2644 188
261 3300048913 Ga0496110_0332884 Ga0496110_0332884_104_688 188
262 3300048914 Ga0496111_0019881 Ga0496111_0019881_2434_3024 188
263 3300048916 Ga0496113_0058012 Ga0496113_0058012_1509_2099 188
264 3300048916 Ga0496113_0130466 Ga0496113_0130466_545_1129 188
265 3300048917 Ga0496114_0022735 Ga0496114_0022735_1172_1762 188
266 3300048917 Ga0496114_0319549 Ga0496114_0319549_221_805 188
267 3300048917 Ga0496114_0427780 Ga0496114_0427780_397_987 188
268 3300048917 Ga0496114_0650013 Ga0496114_0650013_220_810 188
269 3300048918 Ga0496115_0003254 Ga0496115_0003254_1263_1847 188
270 3300048918 Ga0496115_0009171 Ga0496115_0009171_1107_1679 188
271 3300048918 Ga0496115_0513714 Ga0496115_0513714_222_806 188
272 3300049568 Ga0501031_0165165 Ga0501031_0165165_626_1204 188
273 3300049572 Ga0501036_0287305 Ga0501036_0287305_339_917 188
274 3300049573 Ga0501037_0261207 Ga0501037_0261207_190_792 188
275 3300049573 Ga0501037_0292366 Ga0501037_0292366_212_790 188
276 3300049575 Ga0501039_0112175 Ga0501039_0112175_1288_1866 188
277 3300049576 Ga0501040_0070757 Ga0501040_0070757_1179_1757 188
278 3300049582 Ga0501048_0102576 Ga0501048_0102576_169_747 188
279 3300049583 Ga0501067_0007776 Ga0501067_0007776_81_683 188
280 3300049584 Ga0501068_0537335 Ga0501068_0537335_29_631 188
281 3300049585 Ga0501069_0011680 Ga0501069_0011680_3813_4391 188
282 3300049585 Ga0501069_0064560 Ga0501069_0064560_921_1526 188
283 3300049586 Ga0501070_0001455 Ga0501070_0001455_12771_13376 188
284 3300049586 Ga0501070_0030088 Ga0501070_0030088_3417_4019 188
285 3300049589 Ga0501073_0010052 Ga0501073_0010052_6169_6771 188
286 3300049589 Ga0501073_0039170 Ga0501073_0039170_343_948 188
287 3300049590 Ga0501074_0026525 Ga0501074_0026525_961_1566 188
288 3300049593 Ga0501077_0018093 Ga0501077_0018093_3785_4387 188
289 3300049741 Ga0501079_0510429 Ga0501079_0510429_319_921 188
290 3300049741 Ga0501079_0588778 Ga0501079_0588778_209_814 188
291 3300049742 Ga0501080_0057114 Ga0501080_0057114_485_1090 188
292 3300049744 Ga0501083_0142473 Ga0501083_0142473_872_1474 188
293 3300049744 Ga0501083_0385706 Ga0501083_0385706_295_900 188
294 3300050492 nmdc:mga0yw44_210660_c1 nmdc:mga0yw44_210660_c1_604_1188 188
295 3300050492 nmdc:mga0yw44_56103_c1 nmdc:mga0yw44_56103_c1_785_1357 188
296 3300053084 Ga0495595_0110565 Ga0495595_0110565_375_947 188
297 3300053085 Ga0495619_0078481 Ga0495619_0078481_391_963 188
298 3300054114 Ga0501084_0038628 Ga0501084_0038628_891_1493 188
299 3300060353 Ga0501082_0247164 Ga0501082_0247164_905_1510 188
300 3300061734 Ga0530510_0170343 Ga0530510_0170343_845_1423 188

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10400

Vir_act_alpha_C

Virulence activator alpha C-term

106

189

0.92

PF03551

PadR

Transcriptional regulator PadR-like family

19

94

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5h20-assembly1.cif.gz_A-2 x-ray structure of padr-like transcription factor from bacteroid fragilis 0.91 7 90
1s3j-assembly1.cif.gz_B x-ray crystal structure of yuso protein from bacillus subtilis 0.89 3 90
7kua-assembly1.cif.gz_A-2 crystal structure of the marr family transcriptional regulator from pseudomonas putida bound to indole 3 acetic acid 0.8885 4 87
1xma-assembly1.cif.gz_A structure of a transcriptional regulator from clostridium thermocellum cth-833 0.8833 9 91
6abt-assembly1.cif.gz_A crystal structure of transcription factor from listeria monocytogenes 0.8822 9 88
ID Description Score Start End Superfamily
af_O50432_1_88_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9311 9 91 1.10.10.10
af_Q9C106_1_81_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.925 9 78 1.10.10.10
af_P32349_45_122_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9103 4 76 1.10.10.10
5h20A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 7 90 1.10.10.10
5x11A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8998 2 89 1.10.10.10
ID Description Score Start End GO Terms
AF-X8B0H1-F1-model_v4 deleted 0.9148 1 93
AF-A0A1W9UR26-F1-model_v4 PadR family transcriptional regulator 0.8951 8 184
AF-A0A838K2W8-F1-model_v4 PadR family transcriptional regulator 0.8875 9 179
AF-A0A661VCZ5-F1-model_v4 PadR family transcriptional regulator 0.883 8 182
AF-A0A7W0P437-F1-model_v4 PadR family transcriptional regulator 0.8824 8 187

Feature Viewer

pLDDT pTM Quality
81.93 0.71 High
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Predicted Structure (AlphaFold2)

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