F395321

General Info

Members Datasets Scaffolds Average Seq Length
300 138 300 301

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10000355|Ga0105240_1000035567
Length 319
Sequence MRSDRSLRIPAQAGIEMALTIRSISEETAPTPAQDLEKLLAAAAVFVRRHAIASIYHAGSGHPGGAMSVADLLACLFGAELNFWPNAIDDPDRDRFVLSKGHAAPALYAIGAHYGFCDSKAALGLRKLGSAFQGHPHVLDLPWVESSTGSLGQGFSVALGMAMGLKLKRSSARVYTLLGDGELQTGEVWEAAMCAAHHQLDNLCVIIDYNKLQSDNRNDAILRLEPLAAKWRAFDWAIAEIDGHDIAQILATFRRAGATHSRPSVIIAHTIKGKGVPFMENIASWHGSVKLTRAQAEEALLALGANRNEIKEFLDVDGC

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
104 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
105 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
106 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
107 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
108 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
109 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
133 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
134 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
135 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
136 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
137 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.67
Metatranscriptomes 0.33
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2
Nodule 0
Rhizoplane 0
Rhizosphere 96
Stem 0
Stem Tuber 0
Unclassified 2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10201544 3300003320 Bacteria 3704
2 Ga0070658_10177949 3300005327 Bacteria 1789
3 Ga0070666_10003718 3300005335 Bacteria 9244
4 Ga0070666_10085610 3300005335 Bacteria 2159
5 Ga0070680_100001143 3300005336 Bacteria 19030
6 Ga0068868_100035009 3300005338 Bacteria 3880
7 Ga0070660_100001001 3300005339 Bacteria 18970
8 Ga0070691_10000394 3300005341 Bacteria 15865
9 Ga0070661_100005427 3300005344 Bacteria 8789
10 Ga0070675_100039802 3300005354 Bacteria 3837
11 Ga0070673_100407907 3300005364 Bacteria 1216
12 Ga0070688_100167594 3300005365 Bacteria 1513
13 Ga0070659_100112415 3300005366 Bacteria 2199
14 Ga0070667_100074127 3300005367 Unclassified 2903
15 Ga0070667_100137728 3300005367 Bacteria 2135
16 Ga0070663_100080780 3300005455 Unclassified 2388
17 Ga0070678_100332782 3300005456 Bacteria 1300
18 Ga0070681_10000002 3300005458 Bacteria 821814
19 Ga0070681_10326920 3300005458 Bacteria 1443
20 Ga0070679_100003234 3300005530 Bacteria 14885
21 Ga0068853_100000169 3300005539 Bacteria 45200
22 Ga0068853_100002661 3300005539 Bacteria 13465
23 Ga0068853_100059472 3300005539 Bacteria 3301
24 Ga0070696_100013828 3300005546 Bacteria 5419
25 Ga0070696_100168814 3300005546 Bacteria 1616
26 Ga0070665_100008792 3300005548 Bacteria 10221
27 Ga0068855_100000069 3300005563 Bacteria 124154
28 Ga0068855_100046488 3300005563 Bacteria 5131
29 Ga0068855_100111968 3300005563 Bacteria 3132
30 Ga0068857_100000485 3300005577 Bacteria 28393
31 Ga0068857_100180934 3300005577 Bacteria 1919
32 Ga0068854_100029963 3300005578 Bacteria 3772
33 Ga0068856_100008143 3300005614 Bacteria 10226
34 Ga0068856_100226320 3300005614 Bacteria 1886
35 Ga0068856_100291277 3300005614 Bacteria 1649
36 Ga0068852_100001873 3300005616 Bacteria 14312
37 Ga0068852_100010779 3300005616 Bacteria 6846
38 Ga0068852_100466510 3300005616 Bacteria 1252
39 Ga0068859_100244710 3300005617 Bacteria 1883
40 Ga0068871_100174601 3300006358 Bacteria 1844
41 Ga0068865_100215948 3300006881 Bacteria 1497
42 Ga0097620_100244716 3300006931 Bacteria 1883
43 Ga0105240_10000055 3300009093 Bacteria 225380
44 Ga0105240_10000355 3300009093 Bacteria 86025
45 Ga0105240_10001622 3300009093 Bacteria 38172
46 Ga0105240_10032745 3300009093 Bacteria 6726
47 Ga0105240_10038730 3300009093 Bacteria 6112
48 Ga0105240_10048206 3300009093 Bacteria 5386
49 Ga0105240_10054861 3300009093 Bacteria 4992
50 Ga0105247_10075475 3300009101 Bacteria 2116
51 Ga0105241_10007355 3300009174 Bacteria 8099
52 Ga0105241_10025249 3300009174 Bacteria 4415
53 Ga0105241_10108926 3300009174 Unclassified 2215
54 Ga0105241_10182519 3300009174 Bacteria 1741
55 Ga0105241_10485762 3300009174 Bacteria 1099
56 Ga0105242_10006495 3300009176 Bacteria 9005
57 Ga0105242_10368528 3300009176 Bacteria 1331
58 Ga0105248_10000001 3300009177 Bacteria 1881304
59 Ga0105248_10291617 3300009177 Unclassified 1837
60 Ga0105248_10826235 3300009177 Unclassified 1046
61 Ga0105237_10005340 3300009545 Bacteria 14538
62 Ga0105237_10258473 3300009545 Unclassified 1744
63 Ga0105237_10465921 3300009545 Bacteria 1270
64 Ga0105238_10001302 3300009551 Bacteria 25101
65 Ga0105238_10002673 3300009551 Bacteria 17728
66 Ga0105238_10055903 3300009551 Bacteria 3960
67 Ga0105238_10184196 3300009551 Bacteria 2065
68 Ga0105239_10008712 3300010375 Bacteria 11482
69 Ga0105239_10011263 3300010375 Bacteria 9976
70 Ga0105239_10039737 3300010375 Bacteria 5154
71 Ga0105239_10078908 3300010375 Bacteria 3623
72 Ga0105239_10163261 3300010375 Bacteria 2490
73 Ga0105239_10346522 3300010375 Bacteria 1677
74 Ga0105239_10551412 3300010375 Bacteria 1313
75 Ga0105246_10083525 3300011119 Bacteria 2282
76 Ga0157373_10009951 3300013100 Bacteria 7008
77 Ga0157373_10264796 3300013100 Unclassified 1216
78 Ga0157371_10132072 3300013102 Bacteria 1777
79 Ga0157370_10000280 3300013104 Bacteria 64677
80 Ga0157369_10037346 3300013105 Bacteria 5318
81 Ga0157369_10042801 3300013105 Bacteria 4940
82 Ga0157369_10369514 3300013105 Bacteria 1489
83 Ga0157369_10539456 3300013105 Bacteria 1206
84 Ga0157374_10120001 3300013296 Bacteria 2536
85 Ga0157372_10006121 3300013307 Bacteria 12785
86 Ga0157372_10096031 3300013307 Bacteria 3377
87 Ga0157372_10293504 3300013307 Unclassified 1891
88 Ga0163163_10103556 3300014325 Bacteria 2871
89 Ga0157379_10000547 3300014968 Bacteria 30383
90 Ga0157379_10002104 3300014968 Bacteria 16498
91 Ga0213876_10000405 3300021384 Bacteria 36218
92 Ga0209758_1000008 3300025297 Bacteria 1215263
93 Ga0207680_10003238 3300025903 Bacteria 7663
94 Ga0207705_10000058 3300025909 Bacteria 155967
95 Ga0207705_10030376 3300025909 Bacteria 3856
96 Ga0207654_10014872 3300025911 Bacteria 4028
97 Ga0207654_10018150 3300025911 Bacteria 3688
98 Ga0207654_10071470 3300025911 Unclassified 2063
99 Ga0207654_10101579 3300025911 Bacteria 1773
100 Ga0207707_10000002 3300025912 Bacteria 1142054
101 Ga0207707_10000263 3300025912 Bacteria 56613
102 Ga0207707_10480276 3300025912 Bacteria 1061
103 Ga0207695_10000012 3300025913 Bacteria 840961
104 Ga0207695_10005200 3300025913 Bacteria 17414
105 Ga0207695_10006498 3300025913 Bacteria 15143
106 Ga0207695_10012352 3300025913 Bacteria 10260
107 Ga0207695_10034643 3300025913 Bacteria 5487
108 Ga0207695_10043779 3300025913 Bacteria 4767
109 Ga0207671_10014118 3300025914 Bacteria 6327
110 Ga0207660_10000358 3300025917 Bacteria 29719
111 Ga0207660_10000598 3300025917 Bacteria 24324
112 Ga0207657_10000305 3300025919 Bacteria 51999
113 Ga0207649_10009932 3300025920 Bacteria 5216
114 Ga0207649_10370732 3300025920 Bacteria 1065
115 Ga0207652_10000505 3300025921 Bacteria 39729
116 Ga0207652_10000679 3300025921 Bacteria 33231
117 Ga0207694_10000006 3300025924 Bacteria 631109
118 Ga0207694_10056215 3300025924 Bacteria 3056
119 Ga0207694_10118504 3300025924 Bacteria 2112
120 Ga0207650_10471889 3300025925 Bacteria 1046
121 Ga0207659_10066394 3300025926 Bacteria 2618
122 Ga0207690_10076121 3300025932 Bacteria 2329
123 Ga0207686_10008912 3300025934 Bacteria 5428
124 Ga0207711_10000001 3300025941 Bacteria 1325674
125 Ga0207711_10174500 3300025941 Unclassified 1952
126 Ga0207667_10000026 3300025949 Bacteria 343713
127 Ga0207667_10014260 3300025949 Bacteria 9065
128 Ga0207667_10061142 3300025949 Bacteria 3941
129 Ga0207667_10096671 3300025949 Bacteria 3048
130 Ga0207651_10331115 3300025960 Bacteria 1276
131 Ga0207640_10371019 3300025981 Unclassified 1156
132 Ga0207658_10056929 3300025986 Unclassified 2903
133 Ga0207658_10154256 3300025986 Bacteria 1875
134 Ga0207677_10512582 3300026023 Bacteria 1039
135 Ga0207703_10006319 3300026035 Bacteria 9470
136 Ga0207703_10365031 3300026035 Bacteria 1332
137 Ga0207639_10000177 3300026041 Bacteria 49899
138 Ga0207639_10013572 3300026041 Bacteria 5707
139 Ga0207639_10040547 3300026041 Bacteria 3476
140 Ga0207678_10024407 3300026067 Bacteria 5279
141 Ga0207702_10010923 3300026078 Bacteria 7574
142 Ga0207702_10274439 3300026078 Unclassified 1591
143 Ga0207648_10072509 3300026089 Bacteria 3001
144 Ga0207676_10159568 3300026095 Bacteria 1952
145 Ga0207674_10000112 3300026116 Bacteria 94220
146 Ga0207698_10003225 3300026142 Bacteria 9797
147 Ga0268266_10040228 3300028379 Bacteria 3984
148 Ga0265318_10000457 3300028577 Bacteria 30611
149 Ga0265338_10000011 3300028800 Bacteria 433370
150 Ga0265338_10012218 3300028800 Bacteria 9808
151 Ga0265338_10013228 3300028800 Bacteria 9339
152 Ga0265338_10023140 3300028800 Bacteria 6398
153 Ga0265338_10076412 3300028800 Bacteria 2837
154 Ga0265762_1017881 3300030760 Bacteria 1292
155 Ga0265332_10003059 3300031238 Bacteria 8190
156 Ga0265332_10010958 3300031238 Bacteria 4027
157 Ga0265332_10034665 3300031238 Bacteria 2193
158 Ga0265332_10143273 3300031238 Unclassified 1001
159 Ga0265320_10001704 3300031240 Bacteria 15623
160 Ga0265325_10000002 3300031241 Bacteria 396758
161 Ga0265325_10000118 3300031241 Bacteria 54374
162 Ga0265325_10000163 3300031241 Bacteria 47195
163 Ga0265325_10005952 3300031241 Bacteria 7472
164 Ga0265325_10011881 3300031241 Bacteria 4993
165 Ga0265329_10024273 3300031242 Bacteria 2014
166 Ga0265340_10000016 3300031247 Bacteria 94019
167 Ga0265340_10000602 3300031247 Bacteria 20076
168 Ga0265340_10013587 3300031247 Bacteria 4274
169 Ga0265340_10027537 3300031247 Unclassified 2865
170 Ga0265340_10065769 3300031247 Bacteria 1726
171 Ga0265339_10000709 3300031249 Bacteria 25841
172 Ga0265339_10001180 3300031249 Bacteria 19743
173 Ga0265339_10019699 3300031249 Bacteria 3955
174 Ga0265339_10039125 3300031249 Bacteria 2642
175 Ga0265339_10159556 3300031249 Unclassified 1136
176 Ga0265331_10002786 3300031250 Bacteria 11591
177 Ga0265331_10023817 3300031250 Bacteria 3104
178 Ga0265331_10024067 3300031250 Bacteria 3086
179 Ga0265331_10043563 3300031250 Bacteria 2173
180 Ga0265316_10004664 3300031344 Bacteria 13572
181 Ga0265316_10008427 3300031344 Bacteria 9569
182 Ga0265316_10029797 3300031344 Bacteria 4482
183 Ga0265316_10036824 3300031344 Bacteria 3955
184 Ga0265316_10134862 3300031344 Bacteria 1858
185 Ga0265316_10160208 3300031344 Unclassified 1682
186 Ga0265316_10226965 3300031344 Unclassified 1376
187 Ga0265313_10000599 3300031595 Bacteria 37436
188 Ga0265313_10002422 3300031595 Bacteria 16124
189 Ga0265313_10002567 3300031595 Bacteria 15507
190 Ga0265313_10135183 3300031595 Bacteria 1065
191 Ga0265314_10001645 3300031711 Bacteria 24453
192 Ga0265314_10003469 3300031711 Bacteria 15229
193 Ga0265314_10016015 3300031711 Bacteria 5936
194 Ga0265314_10021637 3300031711 Bacteria 4938
195 Ga0265314_10040721 3300031711 Bacteria 3332
196 Ga0265314_10067461 3300031711 Bacteria 2410
197 Ga0265314_10149314 3300031711 Bacteria 1435
198 Ga0265342_10004506 3300031712 Bacteria 10928
199 Ga0265342_10014330 3300031712 Bacteria 5267
200 Ga0265342_10043238 3300031712 Bacteria 2719
201 Ga0265342_10047520 3300031712 Bacteria 2575
202 Ga0373955_0015983 3300035172 Bacteria 3686
203 Ga0373933_0001849 3300035724 Bacteria 12242
204 Ga0373937_0141873 3300036401 Bacteria 2248
205 Ga0373937_0200128 3300036401 Bacteria 1878
206 Ga0395901_0038339 3300038443 Bacteria 4956
207 Ga0436365_1513507 3300039437 Bacteria 68714
208 Ga0436365_1587471 3300039437 Bacteria 2325
209 Ga0495651_0199195 3300046462 Unclassified 1403
210 Ga0495580_0136611 3300046472 Bacteria 1700
211 Ga0495664_0016058 3300046477 Bacteria 4264
212 Ga0495664_0107905 3300046477 Bacteria 1680
213 Ga0495628_0183271 3300046516 Unclassified 1583
214 Ga0495628_0317065 3300046516 Bacteria 1151
215 Ga0495652_0009823 3300046529 Bacteria 8675
216 Ga0495652_0042039 3300046529 Unclassified 3942
217 Ga0495645_0006391 3300046543 Bacteria 8181
218 Ga0495634_0142993 3300046642 Bacteria 1517
219 Ga0495657_0196297 3300046675 Bacteria 1232
220 Ga0495675_0069543 3300047444 Bacteria 2223
221 Ga0495602_0030430 3300048088 Bacteria 5120
222 Ga0496121_0001374 3300048924 Bacteria 41288
223 Ga0496126_0002288 3300048929 Bacteria 26402
224 Ga0501032_0024461 3300049569 Bacteria 4170
225 Ga0501032_0086688 3300049569 Bacteria 2080
226 Ga0501032_0094207 3300049569 Bacteria 1986
227 Ga0501032_0179999 3300049569 Unclassified 1384
228 Ga0501033_0081582 3300049570 Bacteria 2372
229 Ga0501033_0291075 3300049570 Bacteria 1151
230 Ga0501034_0012623 3300049571 Bacteria 8718
231 Ga0501034_0276446 3300049571 Bacteria 1619
232 Ga0501036_0020774 3300049572 Bacteria 5515
233 Ga0501036_0085063 3300049572 Bacteria 2674
234 Ga0501036_0114947 3300049572 Bacteria 2274
235 Ga0501038_0020605 3300049574 Bacteria 5926
236 Ga0501038_0021730 3300049574 Bacteria 5757
237 Ga0501038_0072522 3300049574 Bacteria 2918
238 Ga0501038_0234900 3300049574 Bacteria 1457
239 Ga0501039_0068901 3300049575 Bacteria 2746
240 Ga0501043_0362134 3300049579 Unclassified 1100
241 Ga0501046_0004058 3300049580 Bacteria 13359
242 Ga0501047_0004036 3300049581 Bacteria 13807
243 Ga0501047_0014230 3300049581 Bacteria 7563
244 Ga0501047_0095675 3300049581 Bacteria 2848
245 Ga0501047_0097574 3300049581 Bacteria 2817
246 Ga0501047_0104817 3300049581 Bacteria 2708
247 Ga0501047_0112946 3300049581 Bacteria 2599
248 Ga0501047_0186057 3300049581 Bacteria 1942
249 Ga0501047_0336224 3300049581 Bacteria 1348
250 Ga0501048_0016343 3300049582 Bacteria 5468
251 Ga0501048_0044779 3300049582 Unclassified 3162
252 Ga0501067_0000181 3300049583 Bacteria 35717
253 Ga0501067_0014363 3300049583 Bacteria 4384
254 Ga0501069_0003293 3300049585 Bacteria 8292
255 Ga0501069_0007006 3300049585 Bacteria 5900
256 Ga0501069_0058803 3300049585 Bacteria 2145
257 Ga0501070_0000017 3300049586 Bacteria 173127
258 Ga0501070_0005722 3300049586 Bacteria 10599
259 Ga0501070_0013842 3300049586 Bacteria 6794
260 Ga0501072_0008074 3300049588 Bacteria 7988
261 Ga0501072_0113244 3300049588 Bacteria 2160
262 Ga0501072_0155693 3300049588 Bacteria 1822
263 Ga0501073_0012264 3300049589 Bacteria 6253
264 Ga0501073_0021824 3300049589 Bacteria 4612
265 Ga0501074_0012666 3300049590 Bacteria 6133
266 Ga0501076_0136697 3300049592 Bacteria 1990
267 Ga0501079_0002077 3300049741 Bacteria 14360
268 Ga0501079_0016389 3300049741 Bacteria 5659
269 Ga0501079_0174120 3300049741 Bacteria 1678
270 Ga0501079_0325663 3300049741 Unclassified 1203
271 Ga0501080_0008039 3300049742 Bacteria 9557
272 Ga0501080_0018022 3300049742 Bacteria 6538
273 Ga0501080_0078434 3300049742 Bacteria 3072
274 Ga0501080_0087251 3300049742 Bacteria 2898
275 Ga0501083_0011885 3300049744 Bacteria 6100
276 Ga0501083_0101498 3300049744 Bacteria 1897
277 Ga0501083_0116031 3300049744 Bacteria 1758
278 Ga0501035_0002699 3300049822 Bacteria 17244
279 Ga0501035_0035496 3300049822 Bacteria 4524
280 Ga0501035_0098566 3300049822 Bacteria 2566
281 Ga0501035_0189737 3300049822 Bacteria 1767
282 Ga0501035_0352327 3300049822 Bacteria 1231
283 Ga0501044_0002656 3300049823 Bacteria 20336
284 Ga0501044_0003942 3300049823 Bacteria 16632
285 Ga0501044_0007218 3300049823 Bacteria 12222
286 Ga0501044_0010021 3300049823 Bacteria 10296
287 Ga0501044_0027516 3300049823 Bacteria 6008
288 Ga0501044_0061826 3300049823 Bacteria 3830
289 nmdc:mga08x19_282737_c1 3300050514 Bacteria 1150
290 Ga0500643_000027 3300053087 Bacteria 251062
291 Ga0500595_018308 3300053119 Bacteria 2565
292 Ga0500655_001287 3300053133 Unclassified 4755
293 Ga0500655_003004 3300053133 Bacteria 3061
294 Ga0500619_022302 3300053154 Bacteria 1836
295 Ga0501084_0004285 3300054114 Bacteria 11616
296 Ga0501084_0017537 3300054114 Bacteria 5954
297 Ga0501084_0228272 3300054114 Bacteria 1571
298 Ga0501082_0128010 3300060353 Bacteria 2203
299 Ga0501082_0185758 3300060353 Bacteria 1809
300 Ga0501082_0478071 3300060353 Unclassified 1089

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009177 Ga0105248_10826235 Ga0105248_108262352 261
2 3300049744 Ga0501083_0101498 Ga0501083_0101498_1084_1887 267
3 3300031247 Ga0265340_10000016 Ga0265340_1000001610 277
4 3300031249 Ga0265339_10159556 Ga0265339_101595562 277
5 3300031250 Ga0265331_10043563 Ga0265331_100435632 277
6 3300031344 Ga0265316_10004664 Ga0265316_100046648 277
7 3300031344 Ga0265316_10160208 Ga0265316_101602082 277
8 3300025981 Ga0207640_10371019 Ga0207640_103710192 282
9 3300049588 Ga0501072_0113244 Ga0501072_0113244_38_886 282
10 3300005354 Ga0070675_100039802 Ga0070675_1000398022 288
11 3300005364 Ga0070673_100407907 Ga0070673_1004079072 288
12 3300005456 Ga0070678_100332782 Ga0070678_1003327822 288
13 3300009176 Ga0105242_10368528 Ga0105242_103685282 288
14 3300025926 Ga0207659_10066394 Ga0207659_100663942 288
15 3300025960 Ga0207651_10331115 Ga0207651_103311152 288
16 3300026035 Ga0207703_10006319 Ga0207703_100063197 288
17 3300026089 Ga0207648_10072509 Ga0207648_100725092 288
18 3300048924 Ga0496121_0001374 Ga0496121_0001374_37598_38491 288
19 3300049581 Ga0501047_0336224 Ga0501047_0336224_251_1135 288
20 3300049744 Ga0501083_0116031 Ga0501083_0116031_759_1670 288
21 3300053119 Ga0500595_018308 Ga0500595_018308_135_1028 288
22 3300054114 Ga0501084_0004285 Ga0501084_0004285_7587_8498 288
23 3300060353 Ga0501082_0128010 Ga0501082_0128010_94_1005 288
24 3300060353 Ga0501082_0185758 Ga0501082_0185758_891_1757 288
25 3300031238 Ga0265332_10010958 Ga0265332_100109584 289
26 3300031344 Ga0265316_10029797 Ga0265316_100297973 289
27 3300031711 Ga0265314_10149314 Ga0265314_101493142 289
28 3300005335 Ga0070666_10085610 Ga0070666_100856102 290
29 3300005338 Ga0068868_100035009 Ga0068868_1000350094 290
30 3300005367 Ga0070667_100137728 Ga0070667_1001377282 290
31 3300005617 Ga0068859_100244710 Ga0068859_1002447102 290
32 3300006931 Ga0097620_100244716 Ga0097620_1002447162 290
33 3300011119 Ga0105246_10083525 Ga0105246_100835252 290
34 3300025986 Ga0207658_10154256 Ga0207658_101542562 290
35 3300026023 Ga0207677_10512582 Ga0207677_105125822 290
36 3300026095 Ga0207676_10159568 Ga0207676_101595681 290
37 3300030760 Ga0265762_1017881 Ga0265762_10178812 290
38 3300005577 Ga0068857_100180934 Ga0068857_1001809342 291
39 3300009174 Ga0105241_10182519 Ga0105241_101825192 291
40 3300013105 Ga0157369_10539456 Ga0157369_105394562 291
41 3300031711 Ga0265314_10067461 Ga0265314_100674612 291
42 3300005327 Ga0070658_10177949 Ga0070658_101779492 292
43 3300005339 Ga0070660_100001001 Ga0070660_10000100112 292
44 3300005366 Ga0070659_100112415 Ga0070659_1001124152 292
45 3300005455 Ga0070663_100080780 Ga0070663_1000807801 292
46 3300005539 Ga0068853_100059472 Ga0068853_1000594723 292
47 3300005563 Ga0068855_100111968 Ga0068855_1001119682 292
48 3300005614 Ga0068856_100291277 Ga0068856_1002912772 292
49 3300009093 Ga0105240_10048206 Ga0105240_100482062 292
50 3300009551 Ga0105238_10001302 Ga0105238_100013026 292
51 3300010375 Ga0105239_10551412 Ga0105239_105514122 292
52 3300013100 Ga0157373_10264796 Ga0157373_102647962 292
53 3300013102 Ga0157371_10132072 Ga0157371_101320722 292
54 3300013307 Ga0157372_10006121 Ga0157372_100061219 292
55 3300025909 Ga0207705_10000058 Ga0207705_1000005884 292
56 3300025909 Ga0207705_10030376 Ga0207705_100303764 292
57 3300025912 Ga0207707_10000263 Ga0207707_1000026338 292
58 3300025913 Ga0207695_10005200 Ga0207695_1000520011 292
59 3300025917 Ga0207660_10000358 Ga0207660_1000035812 292
60 3300025919 Ga0207657_10000305 Ga0207657_1000030517 292
61 3300025921 Ga0207652_10000679 Ga0207652_1000067913 292
62 3300025924 Ga0207694_10056215 Ga0207694_100562152 292
63 3300025932 Ga0207690_10076121 Ga0207690_100761212 292
64 3300025949 Ga0207667_10061142 Ga0207667_100611423 292
65 3300026067 Ga0207678_10024407 Ga0207678_100244072 292
66 3300028800 Ga0265338_10013228 Ga0265338_100132285 292
67 3300031240 Ga0265320_10001704 Ga0265320_1000170415 292
68 3300031241 Ga0265325_10011881 Ga0265325_100118813 292
69 3300031247 Ga0265340_10000602 Ga0265340_1000060217 292
70 3300031711 Ga0265314_10001645 Ga0265314_1000164515 292
71 3300031711 Ga0265314_10040721 Ga0265314_100407212 292
72 3300038443 Ga0395901_0038339 Ga0395901_0038339_2259_3155 292
73 3300049569 Ga0501032_0179999 Ga0501032_0179999_325_1242 292
74 3300049574 Ga0501038_0021730 Ga0501038_0021730_902_1819 292
75 3300049579 Ga0501043_0362134 Ga0501043_0362134_106_1023 292
76 3300049581 Ga0501047_0097574 Ga0501047_0097574_754_1671 292
77 3300049581 Ga0501047_0186057 Ga0501047_0186057_42_959 292
78 3300049585 Ga0501069_0058803 Ga0501069_0058803_61_978 292
79 3300049586 Ga0501070_0000017 Ga0501070_0000017_37790_38707 292
80 3300049741 Ga0501079_0325663 Ga0501079_0325663_170_1087 292
81 3300049742 Ga0501080_0018022 Ga0501080_0018022_1432_2349 292
82 3300049822 Ga0501035_0002699 Ga0501035_0002699_9471_10388 292
83 3300049822 Ga0501035_0098566 Ga0501035_0098566_1009_1926 292
84 3300049823 Ga0501044_0002656 Ga0501044_0002656_8282_9199 292
85 3300049823 Ga0501044_0007218 Ga0501044_0007218_7343_8260 292
86 3300049823 Ga0501044_0010021 Ga0501044_0010021_1083_2000 292
87 3300049823 Ga0501044_0061826 Ga0501044_0061826_1849_2766 292
88 3300053087 Ga0500643_000027 Ga0500643_000027_121306_122205 292
89 3300006358 Ga0068871_100174601 Ga0068871_1001746012 293
90 3300006881 Ga0068865_100215948 Ga0068865_1002159482 293
91 3300009093 Ga0105240_10001622 Ga0105240_1000162220 293
92 3300009093 Ga0105240_10038730 Ga0105240_100387302 293
93 3300009174 Ga0105241_10485762 Ga0105241_104857622 293
94 3300009545 Ga0105237_10258473 Ga0105237_102584732 293
95 3300009545 Ga0105237_10465921 Ga0105237_104659212 293
96 3300009551 Ga0105238_10184196 Ga0105238_101841962 293
97 3300010375 Ga0105239_10039737 Ga0105239_100397376 293
98 3300010375 Ga0105239_10078908 Ga0105239_100789082 293
99 3300025913 Ga0207695_10006498 Ga0207695_100064982 293
100 3300025913 Ga0207695_10012352 Ga0207695_100123522 293
101 3300025913 Ga0207695_10043779 Ga0207695_100437795 293
102 3300025920 Ga0207649_10370732 Ga0207649_103707321 293
103 3300025924 Ga0207694_10118504 Ga0207694_101185042 293
104 3300028800 Ga0265338_10076412 Ga0265338_100764122 293
105 3300031241 Ga0265325_10005952 Ga0265325_100059523 293
106 3300031249 Ga0265339_10019699 Ga0265339_100196992 293
107 3300031250 Ga0265331_10024067 Ga0265331_100240672 293
108 3300031595 Ga0265313_10002422 Ga0265313_100024225 293
109 3300031711 Ga0265314_10016015 Ga0265314_100160155 293
110 3300046675 Ga0495657_0196297 Ga0495657_0196297_145_1044 293
111 3300049569 Ga0501032_0094207 Ga0501032_0094207_1063_1965 293
112 3300049570 Ga0501033_0081582 Ga0501033_0081582_213_1133 293
113 3300049570 Ga0501033_0291075 Ga0501033_0291075_230_1132 293
114 3300049571 Ga0501034_0276446 Ga0501034_0276446_513_1415 293
115 3300049572 Ga0501036_0085063 Ga0501036_0085063_430_1329 293
116 3300049572 Ga0501036_0114947 Ga0501036_0114947_1328_2230 293
117 3300049574 Ga0501038_0072522 Ga0501038_0072522_546_1448 293
118 3300049574 Ga0501038_0234900 Ga0501038_0234900_542_1444 293
119 3300049581 Ga0501047_0014230 Ga0501047_0014230_1287_2186 293
120 3300049581 Ga0501047_0104817 Ga0501047_0104817_619_1521 293
121 3300049742 Ga0501080_0078434 Ga0501080_0078434_249_1148 293
122 3300049822 Ga0501035_0189737 Ga0501035_0189737_435_1334 293
123 3300049822 Ga0501035_0352327 Ga0501035_0352327_94_1014 293
124 3300049823 Ga0501044_0027516 Ga0501044_0027516_866_1765 293
125 3300005365 Ga0070688_100167594 Ga0070688_1001675942 294
126 3300005548 Ga0070665_100008792 Ga0070665_1000087928 294
127 3300010375 Ga0105239_10163261 Ga0105239_101632612 294
128 3300025925 Ga0207650_10471889 Ga0207650_104718891 294
129 3300028379 Ga0268266_10040228 Ga0268266_100402283 294
130 3300046516 Ga0495628_0317065 Ga0495628_0317065_28_930 294
131 3300049569 Ga0501032_0086688 Ga0501032_0086688_370_1290 294
132 3300049571 Ga0501034_0012623 Ga0501034_0012623_2277_3197 294
133 3300049572 Ga0501036_0020774 Ga0501036_0020774_1935_2855 294
134 3300049582 Ga0501048_0044779 Ga0501048_0044779_2041_2961 294
135 3300049583 Ga0501067_0000181 Ga0501067_0000181_34184_35104 294
136 3300049585 Ga0501069_0007006 Ga0501069_0007006_1702_2622 294
137 3300049586 Ga0501070_0013842 Ga0501070_0013842_2293_3213 294
138 3300049589 Ga0501073_0021824 Ga0501073_0021824_2953_3873 294
139 3300049741 Ga0501079_0016389 Ga0501079_0016389_2308_3228 294
140 3300049742 Ga0501080_0087251 Ga0501080_0087251_1608_2528 294
141 3300049822 Ga0501035_0035496 Ga0501035_0035496_356_1276 294
142 3300049823 Ga0501044_0003942 Ga0501044_0003942_371_1291 294
143 3300060353 Ga0501082_0478071 Ga0501082_0478071_118_1038 294
144 3300013307 Ga0157372_10096031 Ga0157372_100960313 295
145 3300025297 Ga0209758_1000008 Ga0209758_1000008200 295
146 3300031238 Ga0265332_10034665 Ga0265332_100346652 295
147 3300031241 Ga0265325_10000163 Ga0265325_100001639 295
148 3300031247 Ga0265340_10027537 Ga0265340_100275373 295
149 3300031344 Ga0265316_10036824 Ga0265316_100368244 295
150 3300031711 Ga0265314_10003469 Ga0265314_100034696 295
151 3300031712 Ga0265342_10014330 Ga0265342_100143305 295
152 3300031712 Ga0265342_10043238 Ga0265342_100432383 295
153 3300005335 Ga0070666_10003718 Ga0070666_100037186 296
154 3300005344 Ga0070661_100005427 Ga0070661_1000054275 296
155 3300005367 Ga0070667_100074127 Ga0070667_1000741272 296
156 3300005546 Ga0070696_100168814 Ga0070696_1001688142 296
157 3300005563 Ga0068855_100000069 Ga0068855_100000069118 296
158 3300005614 Ga0068856_100226320 Ga0068856_1002263202 296
159 3300005616 Ga0068852_100001873 Ga0068852_1000018735 296
160 3300005616 Ga0068852_100466510 Ga0068852_1004665101 296
161 3300009093 Ga0105240_10000055 Ga0105240_10000055159 296
162 3300009093 Ga0105240_10054861 Ga0105240_100548612 296
163 3300009101 Ga0105247_10075475 Ga0105247_100754752 296
164 3300009174 Ga0105241_10108926 Ga0105241_101089262 296
165 3300009177 Ga0105248_10291617 Ga0105248_102916172 296
166 3300009551 Ga0105238_10055903 Ga0105238_100559034 296
167 3300010375 Ga0105239_10008712 Ga0105239_100087124 296
168 3300013105 Ga0157369_10042801 Ga0157369_100428011 296
169 3300013105 Ga0157369_10369514 Ga0157369_103695142 296
170 3300013307 Ga0157372_10293504 Ga0157372_102935042 296
171 3300025903 Ga0207680_10003238 Ga0207680_100032386 296
172 3300025911 Ga0207654_10071470 Ga0207654_100714702 296
173 3300025913 Ga0207695_10000012 Ga0207695_10000012178 296
174 3300025920 Ga0207649_10009932 Ga0207649_100099325 296
175 3300025924 Ga0207694_10000006 Ga0207694_10000006486 296
176 3300025941 Ga0207711_10174500 Ga0207711_101745002 296
177 3300025949 Ga0207667_10000026 Ga0207667_10000026215 296
178 3300025949 Ga0207667_10096671 Ga0207667_100966711 296
179 3300025986 Ga0207658_10056929 Ga0207658_100569292 296
180 3300026041 Ga0207639_10040547 Ga0207639_100405474 296
181 3300026078 Ga0207702_10274439 Ga0207702_102744392 296
182 3300026142 Ga0207698_10003225 Ga0207698_100032252 296
183 3300028800 Ga0265338_10012218 Ga0265338_100122186 296
184 3300031247 Ga0265340_10013587 Ga0265340_100135872 296
185 3300031247 Ga0265340_10065769 Ga0265340_100657692 296
186 3300031344 Ga0265316_10134862 Ga0265316_101348622 296
187 3300046472 Ga0495580_0136611 Ga0495580_0136611_214_1113 296
188 3300046477 Ga0495664_0107905 Ga0495664_0107905_483_1397 296
189 3300046529 Ga0495652_0009823 Ga0495652_0009823_1278_2192 296
190 3300046642 Ga0495634_0142993 Ga0495634_0142993_352_1251 296
191 3300048929 Ga0496126_0002288 Ga0496126_0002288_9578_10480 296
192 3300049569 Ga0501032_0024461 Ga0501032_0024461_1754_2671 296
193 3300049574 Ga0501038_0020605 Ga0501038_0020605_2278_3195 296
194 3300049575 Ga0501039_0068901 Ga0501039_0068901_134_1051 296
195 3300049580 Ga0501046_0004058 Ga0501046_0004058_2011_2928 296
196 3300049581 Ga0501047_0095675 Ga0501047_0095675_1160_2077 296
197 3300049582 Ga0501048_0016343 Ga0501048_0016343_96_1013 296
198 3300049585 Ga0501069_0003293 Ga0501069_0003293_6211_7128 296
199 3300049586 Ga0501070_0005722 Ga0501070_0005722_7672_8589 296
200 3300049588 Ga0501072_0155693 Ga0501072_0155693_538_1455 296
201 3300049589 Ga0501073_0012264 Ga0501073_0012264_881_1798 296
202 3300049590 Ga0501074_0012666 Ga0501074_0012666_3717_4634 296
203 3300049592 Ga0501076_0136697 Ga0501076_0136697_788_1705 296
204 3300049741 Ga0501079_0002077 Ga0501079_0002077_7593_8510 296
205 3300049744 Ga0501083_0011885 Ga0501083_0011885_1468_2385 296
206 3300053133 Ga0500655_001287 Ga0500655_001287_716_1630 296
207 3300053133 Ga0500655_003004 Ga0500655_003004_691_1605 296
208 3300054114 Ga0501084_0017537 Ga0501084_0017537_3913_4830 296
209 3300005546 Ga0070696_100013828 Ga0070696_1000138287 297
210 3300009176 Ga0105242_10006495 Ga0105242_100064956 297
211 3300021384 Ga0213876_10000405 Ga0213876_100004052 297
212 3300025934 Ga0207686_10008912 Ga0207686_100089124 297
213 3300028577 Ga0265318_10000457 Ga0265318_1000045715 297
214 3300028800 Ga0265338_10023140 Ga0265338_100231407 297
215 3300031238 Ga0265332_10143273 Ga0265332_101432731 297
216 3300031249 Ga0265339_10039125 Ga0265339_100391253 297
217 3300036401 Ga0373937_0141873 Ga0373937_0141873_1036_1941 297
218 3300039437 Ga0436365_1513507 Ga0436365_1513507_39119_40033 297
219 3300054114 Ga0501084_0228272 Ga0501084_0228272_108_1010 297
220 3300031242 Ga0265329_10024273 Ga0265329_100242732 298
221 3300031250 Ga0265331_10023817 Ga0265331_100238172 298
222 3300031595 Ga0265313_10135183 Ga0265313_101351831 298
223 3300035172 Ga0373955_0015983 Ga0373955_0015983_1610_2518 298
224 3300035724 Ga0373933_0001849 Ga0373933_0001849_2492_3400 298
225 3300036401 Ga0373937_0200128 Ga0373937_0200128_688_1596 298
226 3300048088 Ga0495602_0030430 Ga0495602_0030430_2261_3169 298
227 3300003320 rootH2_10201544 rootH2_102015442 299
228 3300005336 Ga0070680_100001143 Ga0070680_1000011436 299
229 3300005341 Ga0070691_10000394 Ga0070691_100003944 299
230 3300005458 Ga0070681_10000002 Ga0070681_10000002591 299
231 3300005458 Ga0070681_10326920 Ga0070681_103269201 299
232 3300005530 Ga0070679_100003234 Ga0070679_1000032346 299
233 3300005539 Ga0068853_100000169 Ga0068853_10000016921 299
234 3300005539 Ga0068853_100002661 Ga0068853_1000026612 299
235 3300005563 Ga0068855_100046488 Ga0068855_1000464883 299
236 3300005577 Ga0068857_100000485 Ga0068857_1000004854 299
237 3300005578 Ga0068854_100029963 Ga0068854_1000299632 299
238 3300005614 Ga0068856_100008143 Ga0068856_1000081438 299
239 3300005616 Ga0068852_100010779 Ga0068852_1000107792 299
240 3300009093 Ga0105240_10000355 Ga0105240_1000035567 299
241 3300009093 Ga0105240_10032745 Ga0105240_100327452 299
242 3300009174 Ga0105241_10007355 Ga0105241_100073555 299
243 3300009174 Ga0105241_10025249 Ga0105241_100252492 299
244 3300009177 Ga0105248_10000001 Ga0105248_100000011723 299
245 3300009545 Ga0105237_10005340 Ga0105237_100053404 299
246 3300009551 Ga0105238_10002673 Ga0105238_100026737 299
247 3300010375 Ga0105239_10011263 Ga0105239_100112633 299
248 3300010375 Ga0105239_10346522 Ga0105239_103465221 299
249 3300013100 Ga0157373_10009951 Ga0157373_100099516 299
250 3300013104 Ga0157370_10000280 Ga0157370_1000028044 299
251 3300013105 Ga0157369_10037346 Ga0157369_100373464 299
252 3300013296 Ga0157374_10120001 Ga0157374_101200012 299
253 3300014325 Ga0163163_10103556 Ga0163163_101035562 299
254 3300014968 Ga0157379_10000547 Ga0157379_1000054718 299
255 3300014968 Ga0157379_10002104 Ga0157379_1000210416 299
256 3300025911 Ga0207654_10014872 Ga0207654_100148724 299
257 3300025911 Ga0207654_10018150 Ga0207654_100181503 299
258 3300025911 Ga0207654_10101579 Ga0207654_101015791 299
259 3300025912 Ga0207707_10000002 Ga0207707_10000002367 299
260 3300025912 Ga0207707_10480276 Ga0207707_104802761 299
261 3300025913 Ga0207695_10034643 Ga0207695_100346435 299
262 3300025914 Ga0207671_10014118 Ga0207671_100141184 299
263 3300025917 Ga0207660_10000598 Ga0207660_1000059812 299
264 3300025921 Ga0207652_10000505 Ga0207652_1000050519 299
265 3300025941 Ga0207711_10000001 Ga0207711_10000001149 299
266 3300025949 Ga0207667_10014260 Ga0207667_100142603 299
267 3300026035 Ga0207703_10365031 Ga0207703_103650312 299
268 3300026041 Ga0207639_10000177 Ga0207639_1000017720 299
269 3300026041 Ga0207639_10013572 Ga0207639_100135722 299
270 3300026078 Ga0207702_10010923 Ga0207702_100109233 299
271 3300026116 Ga0207674_10000112 Ga0207674_1000011211 299
272 3300028800 Ga0265338_10000011 Ga0265338_10000011350 299
273 3300031238 Ga0265332_10003059 Ga0265332_100030595 299
274 3300031241 Ga0265325_10000002 Ga0265325_1000000218 299
275 3300031241 Ga0265325_10000118 Ga0265325_1000011824 299
276 3300031249 Ga0265339_10000709 Ga0265339_100007095 299
277 3300031249 Ga0265339_10001180 Ga0265339_1000118010 299
278 3300031250 Ga0265331_10002786 Ga0265331_100027867 299
279 3300031344 Ga0265316_10008427 Ga0265316_100084276 299
280 3300031344 Ga0265316_10226965 Ga0265316_102269652 299
281 3300031595 Ga0265313_10000599 Ga0265313_100005994 299
282 3300031595 Ga0265313_10002567 Ga0265313_100025675 299
283 3300031711 Ga0265314_10021637 Ga0265314_100216373 299
284 3300031712 Ga0265342_10004506 Ga0265342_100045065 299
285 3300031712 Ga0265342_10047520 Ga0265342_100475203 299
286 3300039437 Ga0436365_1587471 Ga0436365_1587471_491_1390 299
287 3300046462 Ga0495651_0199195 Ga0495651_0199195_82_1005 299
288 3300046477 Ga0495664_0016058 Ga0495664_0016058_1569_2492 299
289 3300046516 Ga0495628_0183271 Ga0495628_0183271_199_1122 299
290 3300046529 Ga0495652_0042039 Ga0495652_0042039_562_1485 299
291 3300046543 Ga0495645_0006391 Ga0495645_0006391_6390_7313 299
292 3300047444 Ga0495675_0069543 Ga0495675_0069543_59_982 299
293 3300049581 Ga0501047_0004036 Ga0501047_0004036_4052_4975 299
294 3300049581 Ga0501047_0112946 Ga0501047_0112946_85_1005 299
295 3300049583 Ga0501067_0014363 Ga0501067_0014363_596_1519 299
296 3300049588 Ga0501072_0008074 Ga0501072_0008074_2750_3673 299
297 3300049741 Ga0501079_0174120 Ga0501079_0174120_134_1057 299
298 3300049742 Ga0501080_0008039 Ga0501080_0008039_6999_7919 299
299 3300050514 nmdc:mga08x19_282737_c1 nmdc:mga08x19_282737_c1_214_1125 299
300 3300053154 Ga0500619_022302 Ga0500619_022302_734_1654 299

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00456

Transketolase_N

Transketolase, thiamine diphosphate binding domain

40

313

0.91

PF13292

DXP_synthase_N

1-deoxy-D-xylulose-5-phosphate synthase

34

224

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6yak-assembly1.cif.gz_CCC split gene transketolase, active alpha2beta2 heterotetramer 0.9431 19 292
3ooy-assembly1.cif.gz_A crystal structure of human transketolase (tkt) 0.9219 16 291
4kxw-assembly1.cif.gz_A human transketolase in covalent complex with donor ketose d-xylulose-5-phosphate, crystal 2 0.9125 17 290
6rjb-assembly1.cif.gz_A human transketolase variant t382e 0.9124 17 290
8a29-assembly2.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9106 18 270
ID Description Score Start End Superfamily
af_Q58094_1_274_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9586 13 285 3.40.50.970
af_Q58094_1_274_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.945 13 285 3.40.50.970
af_Q6PHI8_1_298_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9344 17 290 3.40.50.970
af_A0A1D6P5P4_1_115_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9119 164 269 3.40.50.970
af_D3ZPV2_12_269_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8939 11 290 3.40.50.970
ID Description Score Start End GO Terms
AF-R5H2C2-F1-model_v4 Transketolase thiamine diphosphate binding domain protein 0.9736 127 284
AF-R5SC59-F1-model_v4 deleted 0.972 131 282
AF-A0A843LJJ8-F1-model_v4 Transketolase 0.9718 133 284 GO:0006082
GO:0044272
AF-A0A0F9GTF7-F1-model_v4 Transketolase N-terminal domain-containing protein 0.9717 143 283
AF-A0A800DIR4-F1-model_v4 Transketolase 0.9701 164 283

Feature Viewer

pLDDT pTM Quality
86.72 0.88 High
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Predicted Structure (AlphaFold2)

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