F394902

General Info

Members Datasets Scaffolds Average Seq Length
299 208 242 382

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10000046|Ga0307405_1000004635
Length 419
Sequence MILKIFSLCTIAIAQRSSWAFGKGFYALSFFFPIFAYKMLNIQSKLPGVSTTIFSVMSKLAAEHNAINLSQGFPDYACDPKLVELVNKAMQDGFNQYAPMPGSTFLKETIAEKVEKLYNIKYNPETEITVTAGGTQAIFTALAAIINAGDEVIIFEPAYDSYAPTIKLLGGLVKTYELAPPNYAIDWDMVKKLFTAKTRMIILNTPQNPTGSILSSDDMKSLIKLITGTDILILSDEVYEHLIYDEQKHQSVMLYPELKQRSFIVASFGKLLHATGWKLGYCLAPEKLTKEFRKVHQFNVFSVNSPMQQAIADYIKEPKNYTEIGTFFQQKRDYFRGLLAESRFKLLPCNGSYFQCASYSSISDEKDTDFSMRLIREFGVATIPVSAFYQKATDHKIIRFCFAKENATLALAAEKLKNV

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
3 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
4 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
5 2643221596 Acidovorax sp. Root70 Isolate Unclassified
6 2643221609 Acidovorax sp. Root217 Isolate Unclassified
7 2643221611 Acidovorax sp. Root219 Isolate Unclassified
8 2643221665 Acinetobacter sp. Root1280 Isolate Unclassified
9 2643221736 Bosea sp. Root483D1 Isolate Unclassified
10 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
11 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
12 2721755523 Delftia sp. HK171 Isolate Unclassified
13 2738541283 Pedobacter sp. OK701 Isolate Unclassified
14 2738541284 Pedobacter sp. YR016 Isolate Unclassified
15 2738541302 Pedobacter sp. CF074 Isolate Unclassified
16 2738543012 Acidovorax sp. CF301 Isolate Unclassified
17 2738543023 Pedobacter sp. OK628 Isolate Unclassified
18 2739367651 Pedobacter sp. OK291 Isolate Unclassified
19 2739367656 Pedobacter sp. CF523 Isolate Unclassified
20 2739367663 Pedobacter sp. YR510 Isolate Unclassified
21 2744054655 Acinetobacter sp. BMW17 Isolate Unclassified
22 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
23 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
24 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
25 2816332133 Acidovorax radicis 2721A Isolate Unclassified
26 2818991437 Pedobacter terrae 518 Isolate Unclassified
27 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
28 2841760612 Bosea sp. Tri-49 Isolate Nodule
29 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
30 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
31 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
32 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
33 2844104063 Bosea sp. Tri-39 Isolate Nodule
34 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
35 2851182111 Bosea sp. Tri-44 Isolate Nodule
36 2851246043 Bosea sp. Tri-54 Isolate Nodule
37 2857553236 Duganella sp. R-74557 Isolate Unclassified
38 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
39 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
40 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
41 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
42 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
43 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
44 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
45 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
46 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
47 2919476304 Duganella sp. 3397 Isolate Unclassified
48 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
49 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
50 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
51 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
52 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
53 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
54 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
55 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
56 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
57 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
58 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
59 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
60 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
61 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
62 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
63 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
64 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
65 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
66 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
67 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
68 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
69 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
70 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
71 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
72 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
73 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
74 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
75 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
76 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
77 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
78 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
79 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
80 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
81 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
82 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
83 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
84 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
85 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
86 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
87 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
88 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
89 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
90 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
91 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
92 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
93 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
94 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
95 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
96 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
97 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
98 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
99 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
100 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
101 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
102 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
103 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
104 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
105 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
106 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
107 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
108 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
109 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
110 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
111 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
112 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
113 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
114 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
115 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
116 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
117 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
118 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
119 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
120 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
122 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
123 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
149 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
150 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
152 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
153 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
154 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
155 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
156 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
157 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
158 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
159 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
160 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
161 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
162 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
163 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
164 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
165 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
166 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
167 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
168 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
169 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
170 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
171 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
172 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
173 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
174 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
175 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
176 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
177 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
178 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
179 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
180 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
181 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
182 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
183 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
184 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
185 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
186 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
187 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
188 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
189 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
190 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
191 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
192 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
193 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
194 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
195 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
196 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
197 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
198 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
199 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
200 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
201 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
202 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
204 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
205 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
206 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
207 8033232454 Acinetobacter radioresistens SA188 Isolate Unclassified
208 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.94
Metatranscriptomes 0
Isolates 19.06

Biome Distribution

Category Percentage (%)
Aerial Root 0.33
Bulb 0
Endosphere 7.69
Nodule 3.34
Rhizoplane 0.67
Rhizosphere 69.9
Stem 0
Stem Tuber 0
Unclassified 18.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_900558 2162886007 Bacteria 1400
2 JGI25152J39213_1000056 3300002773 Bacteria 75516
3 JGI25150J39212_1000009 3300002774 Bacteria 249509
4 JGI25151J46595_10000017 3300003187 Bacteria 249509
5 JGI25153J46596_10000023 3300003215 Bacteria 249509
6 rootH2_10004415 3300003320 Bacteria 27098
7 rootH2_10050637 3300003320 Bacteria 9642
8 rootH1_10165498 3300003323 Bacteria 4512
9 Ga0055536_1000030 3300003781 Bacteria 153926
10 Ga0055536_1000367 3300003781 Bacteria 33548
11 Ga0055536_1000709 3300003781 Bacteria 22354
12 Ga0055530_10000972 3300003791 Bacteria 23228
13 Ga0058692_1000007 3300003856 Bacteria 366313
14 Ga0065703_1000071 3300005272 Bacteria 20714
15 Ga0065714_10002192 3300005288 Bacteria 92967
16 Ga0065714_10003657 3300005288 Bacteria 30790
17 Ga0065714_10064897 3300005288 Bacteria 15960
18 Ga0065704_10072265 3300005289 Bacteria 8829
19 Ga0065704_10079189 3300005289 Bacteria 4233
20 Ga0065704_10088158 3300005289 Bacteria 2962
21 Ga0070676_10001701 3300005328 Bacteria 11187
22 Ga0070660_100102186 3300005339 Bacteria 2272
23 Ga0070669_100001380 3300005353 Bacteria 17523
24 Ga0070673_100006148 3300005364 Bacteria 7782
25 Ga0070673_100008297 3300005364 Bacteria 6902
26 Ga0070678_100028912 3300005456 Bacteria 3788
27 Ga0070662_100000729 3300005457 Bacteria 20118
28 Ga0068867_100000116 3300005459 Bacteria 50447
29 Ga0068853_100004019 3300005539 Bacteria 11312
30 Ga0070665_100049025 3300005548 Bacteria 4239
31 Ga0068855_100026005 3300005563 Bacteria 7002
32 Ga0068857_100073126 3300005577 Bacteria 3054
33 Ga0068852_100000326 3300005616 Bacteria 32458
34 Ga0068866_10004544 3300005718 Bacteria 5690
35 Ga0068870_10035865 3300005840 Bacteria 2548
36 Ga0075363_100001762 3300006048 Bacteria 8451
37 Ga0075364_10011529 3300006051 Bacteria 5373
38 Ga0075369_10008065 3300006186 Bacteria 4038
39 Ga0097621_100000054 3300006237 Bacteria 59756
40 Ga0068871_100000145 3300006358 Bacteria 46320
41 Ga0068865_100000051 3300006881 Bacteria 65346
42 Ga0079104_1000011 3300006946 Bacteria 359962
43 Ga0079104_1007353 3300006946 Bacteria 4009
44 Ga0105251_10001974 3300009011 Bacteria 16741
45 Ga0105251_10103075 3300009011 Bacteria 1303
46 Ga0105251_10106574 3300009011 Bacteria 1279
47 Ga0105251_10111863 3300009011 Bacteria 1243
48 Ga0105244_10009136 3300009036 Bacteria 6118
49 Ga0105244_10010055 3300009036 Bacteria 5762
50 Ga0105250_10011819 3300009092 Bacteria 3619
51 Ga0105250_10083609 3300009092 Bacteria 1295
52 Ga0105240_10003138 3300009093 Bacteria 26003
53 Ga0105240_10006704 3300009093 Bacteria 16871
54 Ga0105240_10292654 3300009093 Bacteria 1866
55 Ga0105240_10332324 3300009093 Bacteria 1729
56 Ga0105247_10010594 3300009101 Bacteria 5569
57 Ga0105247_10075157 3300009101 Bacteria 2120
58 Ga0105243_10000016 3300009148 Bacteria 235629
59 Ga0105243_10000781 3300009148 Bacteria 30536
60 Ga0105243_10001394 3300009148 Bacteria 21367
61 Ga0105241_10001103 3300009174 Bacteria 20558
62 Ga0105241_10021328 3300009174 Bacteria 4788
63 Ga0105242_10013193 3300009176 Bacteria 6379
64 Ga0105237_10001447 3300009545 Bacteria 31365
65 Ga0105237_10006679 3300009545 Bacteria 12752
66 Ga0105237_10034815 3300009545 Bacteria 5096
67 Ga0105237_10280317 3300009545 Bacteria 1669
68 Ga0105238_10004886 3300009551 Bacteria 13258
69 Ga0105249_10000706 3300009553 Bacteria 30271
70 Ga0105239_10000228 3300010375 Bacteria 82820
71 Ga0105239_10005819 3300010375 Bacteria 14375
72 Ga0105239_10105533 3300010375 Bacteria 3120
73 Ga0105239_10151979 3300010375 Bacteria 2584
74 Ga0157373_10001209 3300013100 Bacteria 19722
75 Ga0157371_10000034 3300013102 Bacteria 223947
76 Ga0157371_10001510 3300013102 Bacteria 24040
77 Ga0157371_10003233 3300013102 Bacteria 14952
78 Ga0157371_10008786 3300013102 Bacteria 8010
79 Ga0157371_10049074 3300013102 Bacteria 2999
80 Ga0157371_10150208 3300013102 Bacteria 1661
81 Ga0157370_10003221 3300013104 Bacteria 19273
82 Ga0157370_10005022 3300013104 Bacteria 14947
83 Ga0157370_10032580 3300013104 Bacteria 5088
84 Ga0157370_10042600 3300013104 Bacteria 4373
85 Ga0157370_10053620 3300013104 Bacteria 3845
86 Ga0157370_10080579 3300013104 Bacteria 3065
87 Ga0157369_10000002 3300013105 Bacteria 524510
88 Ga0157369_10004567 3300013105 Bacteria 16273
89 Ga0157369_10030662 3300013105 Bacteria 5929
90 Ga0157369_10109089 3300013105 Bacteria 2943
91 Ga0157374_10001372 3300013296 Bacteria 20693
92 Ga0157374_10001374 3300013296 Bacteria 20684
93 Ga0163162_10032886 3300013306 Bacteria 5151
94 Ga0157372_10000883 3300013307 Bacteria 32570
95 Ga0157372_10007548 3300013307 Bacteria 11565
96 Ga0157375_10095830 3300013308 Bacteria 3039
97 Ga0182008_10000018 3300014497 Bacteria 230609
98 Ga0182008_10000524 3300014497 Bacteria 28770
99 Ga0182008_10001182 3300014497 Bacteria 17998
100 Ga0182008_10017905 3300014497 Bacteria 3670
101 Ga0182008_10018995 3300014497 Bacteria 3553
102 Ga0182006_1000042 3300015261 Bacteria 202969
103 Ga0182006_1000382 3300015261 Bacteria 36661
104 Ga0182006_1006345 3300015261 Bacteria 5505
105 Ga0182006_1016754 3300015261 Bacteria 3123
106 Ga0182007_10000001 3300015262 Bacteria 1127301
107 Ga0182007_10000508 3300015262 Bacteria 22990
108 Ga0182007_10015715 3300015262 Bacteria 2813
109 Ga0182005_1000008 3300015265 Bacteria 471394
110 Ga0183373_1010 3300015682 Bacteria 196982
111 Ga0163161_10000211 3300017792 Bacteria 53320
112 Ga0163161_10000218 3300017792 Bacteria 52323
113 Ga0163161_10001606 3300017792 Bacteria 16680
114 Ga0163161_10012130 3300017792 Bacteria 5978
115 Ga0163161_10079996 3300017792 Bacteria 2404
116 Ga0207425_1000007 3300025245 Bacteria 777411
117 Ga0209129_1000006 3300025258 Bacteria 777761
118 Ga0209233_1005281 3300025261 Bacteria 4305
119 Ga0209130_1000045 3300025284 Bacteria 240278
120 Ga0209676_1000001 3300025292 Bacteria 1852142
121 Ga0209025_1000025 3300025294 Bacteria 524454
122 Ga0209025_1000932 3300025294 Bacteria 44615
123 Ga0209758_1000016 3300025297 Bacteria 778557
124 Ga0209050_1000018 3300025298 Bacteria 723263
125 Ga0207696_1040676 3300025711 Bacteria 1361
126 Ga0207655_1001873 3300025728 Bacteria 18107
127 Ga0207655_1002409 3300025728 Bacteria 15224
128 Ga0207655_1003432 3300025728 Bacteria 11799
129 Ga0207655_1007170 3300025728 Bacteria 7269
130 Ga0207655_1007639 3300025728 Bacteria 6982
131 Ga0207713_1003189 3300025735 Bacteria 11339
132 Ga0207713_1021246 3300025735 Bacteria 3117
133 Ga0207710_10000018 3300025900 Bacteria 346727
134 Ga0207710_10057260 3300025900 Bacteria 1760
135 Ga0207647_10000030 3300025904 Bacteria 106974
136 Ga0207647_10006358 3300025904 Bacteria 8590
137 Ga0207645_10000652 3300025907 Bacteria 28838
138 Ga0207654_10002197 3300025911 Bacteria 9992
139 Ga0207695_10000013 3300025913 Bacteria 821265
140 Ga0207695_10004410 3300025913 Bacteria 19232
141 Ga0207695_10005523 3300025913 Bacteria 16736
142 Ga0207671_10005850 3300025914 Bacteria 11172
143 Ga0207671_10020108 3300025914 Bacteria 5090
144 Ga0207671_10041965 3300025914 Bacteria 3386
145 Ga0207657_10109434 3300025919 Bacteria 2284
146 Ga0207694_10159579 3300025924 Bacteria 1821
147 Ga0207690_10128043 3300025932 Bacteria 1854
148 Ga0207690_10135581 3300025932 Bacteria 1807
149 Ga0207706_10001974 3300025933 Bacteria 20125
150 Ga0207686_10178214 3300025934 Bacteria 1505
151 Ga0207709_10000016 3300025935 Bacteria 478406
152 Ga0207709_10000020 3300025935 Bacteria 392366
153 Ga0207709_10000245 3300025935 Bacteria 66704
154 Ga0207704_10000046 3300025938 Bacteria 86187
155 Ga0207667_10201786 3300025949 Bacteria 2040
156 Ga0207651_10008948 3300025960 Bacteria 5439
157 Ga0207651_10044962 3300025960 Bacteria 2959
158 Ga0207712_10035817 3300025961 Bacteria 3375
159 Ga0207639_10065875 3300026041 Bacteria 2813
160 Ga0207648_10000257 3300026089 Bacteria 57438
161 Ga0207674_10038716 3300026116 Bacteria 4945
162 Ga0207683_10006037 3300026121 Bacteria 10370
163 Ga0207698_10001065 3300026142 Bacteria 15961
164 Ga0209281_1000005 3300027111 Bacteria 1242284
165 Ga0209281_1005216 3300027111 Bacteria 3659
166 Ga0209371_1000024 3300027312 Bacteria 477286
167 Ga0268266_10002277 3300028379 Bacteria 20864
168 Ga0307517_10001926 3300028786 Bacteria 33977
169 Ga0307515_10051252 3300028794 Bacteria 6161
170 Ga0268256_1000026 3300030500 Bacteria 477260
171 Ga0316183_1061190 3300030742 Bacteria 19974
172 Ga0316181_1135230 3300030744 Bacteria 6751
173 Ga0316575_10000039 3300031665 Bacteria 32234
174 Ga0307405_10000046 3300031731 Bacteria 71442
175 Ga0307407_10000090 3300031903 Bacteria 32483
176 Ga0307416_100000195 3300032002 Bacteria 32400
177 Ga0307414_10000722 3300032004 Bacteria 16914
178 Ga0307414_10006868 3300032004 Bacteria 6368
179 Ga0307414_10119547 3300032004 Bacteria 2023
180 Ga0307414_10159926 3300032004 Bacteria 1788
181 Ga0316583_10001918 3300032133 Bacteria 7106
182 Ga0316574_0000679 3300035398 Bacteria 14420
183 Ga0395899_0001077 3300037312 Bacteria 24592
184 Ga0395900_0001393 3300037418 Bacteria 28920
185 Ga0395900_0003225 3300037418 Bacteria 17664
186 Ga0395898_0010162 3300037466 Bacteria 9850
187 Ga0395898_0087268 3300037466 Bacteria 3006
188 Ga0395905_0006361 3300037471 Bacteria 11905
189 Ga0395901_0004032 3300038443 Bacteria 14793
190 Ga0395901_0082314 3300038443 Bacteria 3363
191 Ga0451577_0003464 3300042876 Bacteria 17556
192 Ga0495627_000001 3300046453 Bacteria 1104709
193 Ga0495603_0055106 3300046455 Bacteria 2356
194 Ga0495650_0000185 3300046471 Bacteria 136913
195 Ga0495650_0052683 3300046471 Bacteria 1669
196 Ga0495584_0022006 3300046491 Bacteria 3236
197 Ga0495585_0021416 3300046492 Bacteria 3711
198 Ga0495606_0000087 3300046507 Bacteria 156407
199 Ga0495610_0000126 3300046512 Bacteria 85368
200 Ga0495610_0000469 3300046512 Bacteria 41650
201 Ga0495643_0061681 3300046522 Bacteria 1987
202 Ga0495644_0016854 3300046523 Bacteria 2796
203 Ga0495663_0002136 3300046525 Bacteria 6036
204 Ga0495586_0089349 3300046535 Bacteria 1700
205 Ga0495609_0000176 3300046538 Bacteria 64707
206 Ga0495633_0002529 3300046558 Bacteria 12851
207 Ga0495633_0019940 3300046558 Bacteria 3383
208 Ga0495633_0106263 3300046558 Bacteria 1302
209 Ga0495588_0039605 3300046674 Bacteria 2401
210 Ga0495670_0011629 3300046691 Bacteria 4331
211 Ga0495660_0000086 3300046810 Bacteria 100316
212 Ga0495660_0004027 3300046810 Bacteria 8971
213 Ga0495581_0158406 3300047315 Bacteria 1323
214 Ga0495636_0009245 3300047318 Bacteria 3880
215 Ga0495683_0016992 3300047323 Bacteria 3774
216 Ga0495675_0023999 3300047444 Bacteria 3886
217 Ga0495681_0014690 3300047470 Bacteria 4474
218 Ga0495593_0017529 3300047673 Bacteria 4030
219 Ga0496112_0055759 3300048915 Bacteria 3887
220 Ga0496113_0331388 3300048916 Bacteria 1220
221 Ga0496116_0001296 3300048919 Bacteria 28588
222 Ga0496116_0014421 3300048919 Bacteria 6313
223 Ga0496117_0002610 3300048920 Bacteria 22398
224 Ga0496119_0007511 3300048922 Bacteria 9799
225 Ga0496122_0000746 3300048925 Bacteria 63466
226 Ga0496122_0000965 3300048925 Bacteria 51557
227 Ga0496122_0059453 3300048925 Bacteria 2821
228 Ga0496122_0090198 3300048925 Bacteria 2092
229 Ga0496123_0000456 3300048926 Bacteria 71960
230 Ga0496123_0027595 3300048926 Bacteria 4225
231 Ga0496123_0035122 3300048926 Bacteria 3578
232 Ga0496124_0000813 3300048927 Bacteria 50733
233 Ga0496124_0016682 3300048927 Bacteria 6969
234 Ga0496125_0000710 3300048928 Bacteria 55020
235 Ga0496125_0022164 3300048928 Bacteria 5903
236 Ga0496126_0018678 3300048929 Bacteria 6861
237 Ga0495678_000002 3300049459 Bacteria 999613
238 Ga0501034_0060717 3300049571 Bacteria 3797
239 Ga0501280_003797 3300049776 Bacteria 2278
240 Ga0500635_0004988 3300053080 Bacteria 3455
241 Ga0500556_0000956 3300053104 Bacteria 15501
242 Ga0500608_000329 3300053122 Bacteria 18275

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053122 Ga0500608_000329 Ga0500608_000329_17295_18257 320
2 3300037466 Ga0395898_0087268 Ga0395898_0087268_43_1044 330
3 3300048916 Ga0496113_0331388 Ga0496113_0331388_19_1032 337
4 3300048922 Ga0496119_0007511 Ga0496119_0007511_5029_6123 362
5 3300009093 Ga0105240_10292654 Ga0105240_102926541 363
6 3300009148 Ga0105243_10000016 Ga0105243_1000001615 363
7 3300010375 Ga0105239_10000228 Ga0105239_100002283 363
8 3300014497 Ga0182008_10018995 Ga0182008_100189952 363
9 3300015261 Ga0182006_1006345 Ga0182006_10063453 363
10 3300017792 Ga0163161_10001606 Ga0163161_100016065 363
11 3300025914 Ga0207671_10020108 Ga0207671_100201083 363
12 3300046691 Ga0495670_0011629 Ga0495670_0011629_1362_2459 363
13 3300047315 Ga0495581_0158406 Ga0495581_0158406_53_1150 363
14 3300053080 Ga0500635_0004988 Ga0500635_0004988_1308_2408 363
15 3300032004 Ga0307414_10159926 Ga0307414_101599262 365
16 3300005364 Ga0070673_100006148 Ga0070673_1000061485 370
17 3300009011 Ga0105251_10103075 Ga0105251_101030752 370
18 3300009011 Ga0105251_10106574 Ga0105251_101065741 370
19 3300009092 Ga0105250_10083609 Ga0105250_100836092 370
20 3300009148 Ga0105243_10000781 Ga0105243_1000078113 370
21 3300017792 Ga0163161_10012130 Ga0163161_100121302 370
22 3300025711 Ga0207696_1040676 Ga0207696_10406761 370
23 3300025728 Ga0207655_1007639 Ga0207655_10076394 370
24 3300025935 Ga0207709_10000016 Ga0207709_10000016388 370
25 3300025960 Ga0207651_10008948 Ga0207651_100089482 370
26 3300005718 Ga0068866_10004544 Ga0068866_100045443 372
27 3300009174 Ga0105241_10001103 Ga0105241_100011034 374
28 3300010375 Ga0105239_10151979 Ga0105239_101519792 374
29 3300013102 Ga0157371_10150208 Ga0157371_101502082 374
30 3300013296 Ga0157374_10001374 Ga0157374_100013744 374
31 3300013307 Ga0157372_10007548 Ga0157372_100075483 374
32 3300013308 Ga0157375_10095830 Ga0157375_100958302 374
33 iso_pu_bacteria 2643221736 2644743754 374
34 iso_pu_bacteria 2841760612 2841764929 374
35 iso_pu_bacteria 2844104063 2844107623 374
36 iso_pu_bacteria 2851182111 2851183628 374
37 iso_pu_bacteria 2851246043 2851249729 374
38 iso_pu_bacteria 8057529695 8057533044 374
39 3300005339 Ga0070660_100102186 Ga0070660_1001021862 375
40 3300005457 Ga0070662_100000729 Ga0070662_10000072917 375
41 3300025904 Ga0207647_10006358 Ga0207647_100063583 375
42 3300025911 Ga0207654_10002197 Ga0207654_100021976 375
43 3300025919 Ga0207657_10109434 Ga0207657_101094342 375
44 3300025932 Ga0207690_10135581 Ga0207690_101355812 375
45 3300025933 Ga0207706_10001974 Ga0207706_100019743 375
46 iso_pu_bacteria 2842391507 2842391989 376
47 iso_pu_bacteria 2916699645 2916700639 376
48 iso_pu_bacteria 2919134579 2919138490 376
49 iso_pu_bacteria 2961064222 2961066116 376
50 iso_pu_bacteria 2987605356 2987606257 376
51 3300046810 Ga0495660_0000086 Ga0495660_0000086_80126_81319 377
52 iso_pu_bacteria 2551306352 2552748569 377
53 iso_pu_bacteria 2585427687 2586209966 377
54 iso_pu_bacteria 2639762793 2640736165 377
55 iso_pu_bacteria 2643221665 2644364588 377
56 iso_pu_bacteria 2675903507 2678229398 377
57 iso_pu_bacteria 2738541283 2738755040 377
58 iso_pu_bacteria 2738541284 2738760993 377
59 iso_pu_bacteria 2738541302 2738853208 377
60 iso_pu_bacteria 2738543023 2739301196 377
61 iso_pu_bacteria 2739367651 2739588778 377
62 iso_pu_bacteria 2739367656 2739616029 377
63 iso_pu_bacteria 2739367663 2739645195 377
64 iso_pu_bacteria 2773857761 2774390076 377
65 iso_pu_bacteria 2773857770 2774438079 377
66 iso_pu_bacteria 2775506987 2776613179 377
67 iso_pu_bacteria 2818991437 2819548766 377
68 iso_pu_bacteria 2842909656 2842910447 377
69 iso_pu_bacteria 2849281842 2849282259 377
70 iso_pu_bacteria 2857627736 2857629175 377
71 iso_pu_bacteria 2902048731 2902051782 377
72 iso_pu_bacteria 2904445276 2904445594 377
73 iso_pu_bacteria 2919182534 2919184407 377
74 iso_pu_bacteria 2928515477 2928517289 377
75 iso_pu_bacteria 2945997725 2946000802 377
76 iso_pu_bacteria 2954016120 2954017672 377
77 iso_pu_bacteria 2984568884 2984571571 377
78 iso_pu_bacteria 8033232454 8033234354 377
79 3300025284 Ga0209130_1000045 Ga0209130_1000045141 378
80 3300025294 Ga0209025_1000932 Ga0209025_100093221 378
81 3300053104 Ga0500556_0000956 Ga0500556_0000956_9382_10545 378
82 iso_pu_bacteria 2721755487 2722725702 378
83 iso_pu_bacteria 2744054655 2745159580 378
84 iso_pu_bacteria 2904780799 2904782442 378
85 iso_pu_bacteria 2919177583 2919178361 378
86 iso_pu_bacteria 3003233435 3003233944 378
87 3300042876 Ga0451577_0003464 Ga0451577_0003464_3706_4851 379
88 iso_pu_bacteria 2895498888 2895498913 379
89 3300003781 Ga0055536_1000367 Ga0055536_100036722 380
90 3300006186 Ga0075369_10008065 Ga0075369_100080654 380
91 3300006946 Ga0079104_1007353 Ga0079104_10073533 380
92 3300015261 Ga0182006_1000042 Ga0182006_1000042152 380
93 3300015265 Ga0182005_1000008 Ga0182005_1000008137 380
94 3300027111 Ga0209281_1005216 Ga0209281_10052162 380
95 3300031665 Ga0316575_10000039 Ga0316575_1000003912 380
96 3300032133 Ga0316583_10001918 Ga0316583_100019186 380
97 3300035398 Ga0316574_0000679 Ga0316574_0000679_6619_7761 380
98 3300046453 Ga0495627_000001 Ga0495627_000001_776174_777358 380
99 3300046522 Ga0495643_0061681 Ga0495643_0061681_523_1707 380
100 3300046523 Ga0495644_0016854 Ga0495644_0016854_259_1443 380
101 3300046538 Ga0495609_0000176 Ga0495609_0000176_28996_30180 380
102 3300046810 Ga0495660_0004027 Ga0495660_0004027_5284_6468 380
103 3300048919 Ga0496116_0014421 Ga0496116_0014421_2434_3618 380
104 3300048925 Ga0496122_0000965 Ga0496122_0000965_44680_45828 380
105 3300048926 Ga0496123_0000456 Ga0496123_0000456_5878_7026 380
106 3300048927 Ga0496124_0000813 Ga0496124_0000813_13896_15044 380
107 3300048927 Ga0496124_0016682 Ga0496124_0016682_470_1660 380
108 3300049459 Ga0495678_000002 Ga0495678_000002_681597_682784 380
109 3300049571 Ga0501034_0060717 Ga0501034_0060717_1593_2741 380
110 iso_pu_bacteria 2857553236 2857557383 380
111 iso_pu_bacteria 2919476304 2919478027 380
112 3300002773 JGI25152J39213_1000056 JGI25152J39213_100005652 381
113 3300002774 JGI25150J39212_1000009 JGI25150J39212_100000916 381
114 3300003187 JGI25151J46595_10000017 JGI25151J46595_1000001716 381
115 3300003215 JGI25153J46596_10000023 JGI25153J46596_10000023221 381
116 3300003320 rootH2_10004415 rootH2_1000441515 381
117 3300003320 rootH2_10050637 rootH2_100506372 381
118 3300003323 rootH1_10165498 rootH1_101654983 381
119 3300003781 Ga0055536_1000030 Ga0055536_1000030104 381
120 3300003856 Ga0058692_1000007 Ga0058692_1000007263 381
121 3300005272 Ga0065703_1000071 Ga0065703_100007111 381
122 3300005288 Ga0065714_10002192 Ga0065714_1000219236 381
123 3300005288 Ga0065714_10003657 Ga0065714_1000365715 381
124 3300005288 Ga0065714_10064897 Ga0065714_100648977 381
125 3300005289 Ga0065704_10079189 Ga0065704_100791891 381
126 3300005289 Ga0065704_10088158 Ga0065704_100881581 381
127 3300005328 Ga0070676_10001701 Ga0070676_100017017 381
128 3300005353 Ga0070669_100001380 Ga0070669_1000013809 381
129 3300005364 Ga0070673_100008297 Ga0070673_1000082973 381
130 3300005456 Ga0070678_100028912 Ga0070678_1000289123 381
131 3300005459 Ga0068867_100000116 Ga0068867_10000011613 381
132 3300005539 Ga0068853_100004019 Ga0068853_1000040198 381
133 3300005548 Ga0070665_100049025 Ga0070665_1000490253 381
134 3300005563 Ga0068855_100026005 Ga0068855_1000260052 381
135 3300005577 Ga0068857_100073126 Ga0068857_1000731262 381
136 3300005616 Ga0068852_100000326 Ga0068852_10000032629 381
137 3300005840 Ga0068870_10035865 Ga0068870_100358651 381
138 3300006048 Ga0075363_100001762 Ga0075363_1000017629 381
139 3300006051 Ga0075364_10011529 Ga0075364_100115295 381
140 3300006237 Ga0097621_100000054 Ga0097621_10000005416 381
141 3300006358 Ga0068871_100000145 Ga0068871_10000014532 381
142 3300006881 Ga0068865_100000051 Ga0068865_10000005140 381
143 3300006946 Ga0079104_1000011 Ga0079104_100001141 381
144 3300009011 Ga0105251_10001974 Ga0105251_100019744 381
145 3300009011 Ga0105251_10111863 Ga0105251_101118631 381
146 3300009036 Ga0105244_10009136 Ga0105244_100091365 381
147 3300009036 Ga0105244_10010055 Ga0105244_100100553 381
148 3300009092 Ga0105250_10011819 Ga0105250_100118191 381
149 3300009093 Ga0105240_10003138 Ga0105240_1000313816 381
150 3300009093 Ga0105240_10006704 Ga0105240_100067049 381
151 3300009093 Ga0105240_10332324 Ga0105240_103323242 381
152 3300009101 Ga0105247_10010594 Ga0105247_100105945 381
153 3300009101 Ga0105247_10075157 Ga0105247_100751572 381
154 3300009148 Ga0105243_10001394 Ga0105243_1000139421 381
155 3300009176 Ga0105242_10013193 Ga0105242_100131933 381
156 3300009545 Ga0105237_10001447 Ga0105237_1000144712 381
157 3300009545 Ga0105237_10034815 Ga0105237_100348154 381
158 3300009545 Ga0105237_10280317 Ga0105237_102803171 381
159 3300009551 Ga0105238_10004886 Ga0105238_100048868 381
160 3300009553 Ga0105249_10000706 Ga0105249_100007062 381
161 3300010375 Ga0105239_10105533 Ga0105239_101055332 381
162 3300013100 Ga0157373_10001209 Ga0157373_100012098 381
163 3300013102 Ga0157371_10001510 Ga0157371_1000151021 381
164 3300013102 Ga0157371_10003233 Ga0157371_100032335 381
165 3300013102 Ga0157371_10008786 Ga0157371_100087866 381
166 3300013102 Ga0157371_10049074 Ga0157371_100490742 381
167 3300013104 Ga0157370_10003221 Ga0157370_100032213 381
168 3300013104 Ga0157370_10005022 Ga0157370_1000502211 381
169 3300013104 Ga0157370_10032580 Ga0157370_100325804 381
170 3300013104 Ga0157370_10042600 Ga0157370_100426003 381
171 3300013104 Ga0157370_10053620 Ga0157370_100536203 381
172 3300013104 Ga0157370_10080579 Ga0157370_100805792 381
173 3300013105 Ga0157369_10000002 Ga0157369_10000002271 381
174 3300013105 Ga0157369_10004567 Ga0157369_100045676 381
175 3300013105 Ga0157369_10030662 Ga0157369_100306623 381
176 3300013105 Ga0157369_10109089 Ga0157369_101090891 381
177 3300013296 Ga0157374_10001372 Ga0157374_100013723 381
178 3300013306 Ga0163162_10032886 Ga0163162_100328864 381
179 3300013307 Ga0157372_10000883 Ga0157372_1000088317 381
180 3300014497 Ga0182008_10000018 Ga0182008_10000018142 381
181 3300014497 Ga0182008_10000524 Ga0182008_100005248 381
182 3300014497 Ga0182008_10001182 Ga0182008_100011828 381
183 3300014497 Ga0182008_10017905 Ga0182008_100179053 381
184 3300015261 Ga0182006_1000382 Ga0182006_100038227 381
185 3300015261 Ga0182006_1016754 Ga0182006_10167542 381
186 3300015262 Ga0182007_10000001 Ga0182007_10000001500 381
187 3300015262 Ga0182007_10000508 Ga0182007_1000050821 381
188 3300015262 Ga0182007_10015715 Ga0182007_100157153 381
189 3300017792 Ga0163161_10000211 Ga0163161_1000021138 381
190 3300017792 Ga0163161_10000218 Ga0163161_1000021810 381
191 3300017792 Ga0163161_10079996 Ga0163161_100799961 381
192 3300025245 Ga0207425_1000007 Ga0207425_1000007537 381
193 3300025258 Ga0209129_1000006 Ga0209129_1000006537 381
194 3300025261 Ga0209233_1005281 Ga0209233_10052814 381
195 3300025292 Ga0209676_1000001 Ga0209676_1000001994 381
196 3300025294 Ga0209025_1000025 Ga0209025_1000025367 381
197 3300025297 Ga0209758_1000016 Ga0209758_1000016537 381
198 3300025298 Ga0209050_1000018 Ga0209050_1000018589 381
199 3300025728 Ga0207655_1001873 Ga0207655_100187311 381
200 3300025728 Ga0207655_1002409 Ga0207655_100240914 381
201 3300025728 Ga0207655_1003432 Ga0207655_10034323 381
202 3300025728 Ga0207655_1007170 Ga0207655_10071708 381
203 3300025735 Ga0207713_1003189 Ga0207713_100318910 381
204 3300025735 Ga0207713_1021246 Ga0207713_10212462 381
205 3300025900 Ga0207710_10000018 Ga0207710_10000018240 381
206 3300025900 Ga0207710_10057260 Ga0207710_100572601 381
207 3300025904 Ga0207647_10000030 Ga0207647_1000003022 381
208 3300025907 Ga0207645_10000652 Ga0207645_1000065224 381
209 3300025913 Ga0207695_10004410 Ga0207695_100044103 381
210 3300025913 Ga0207695_10005523 Ga0207695_1000552310 381
211 3300025914 Ga0207671_10041965 Ga0207671_100419652 381
212 3300025924 Ga0207694_10159579 Ga0207694_101595792 381
213 3300025932 Ga0207690_10128043 Ga0207690_101280431 381
214 3300025934 Ga0207686_10178214 Ga0207686_101782141 381
215 3300025935 Ga0207709_10000245 Ga0207709_1000024526 381
216 3300025938 Ga0207704_10000046 Ga0207704_1000004639 381
217 3300025949 Ga0207667_10201786 Ga0207667_102017862 381
218 3300025960 Ga0207651_10044962 Ga0207651_100449621 381
219 3300025961 Ga0207712_10035817 Ga0207712_100358172 381
220 3300026041 Ga0207639_10065875 Ga0207639_100658752 381
221 3300026089 Ga0207648_10000257 Ga0207648_1000025737 381
222 3300026116 Ga0207674_10038716 Ga0207674_100387163 381
223 3300026121 Ga0207683_10006037 Ga0207683_100060373 381
224 3300026142 Ga0207698_10001065 Ga0207698_100010656 381
225 3300027111 Ga0209281_1000005 Ga0209281_1000005897 381
226 3300027312 Ga0209371_1000024 Ga0209371_100002493 381
227 3300028379 Ga0268266_10002277 Ga0268266_1000227712 381
228 3300028786 Ga0307517_10001926 Ga0307517_1000192632 381
229 3300028794 Ga0307515_10051252 Ga0307515_100512523 381
230 3300030500 Ga0268256_1000026 Ga0268256_100002693 381
231 3300030742 Ga0316183_1061190 Ga0316183_106119010 381
232 3300030744 Ga0316181_1135230 Ga0316181_11352301 381
233 3300031903 Ga0307407_10000090 Ga0307407_1000009030 381
234 3300032002 Ga0307416_100000195 Ga0307416_10000019529 381
235 3300032004 Ga0307414_10000722 Ga0307414_1000072216 381
236 3300032004 Ga0307414_10006868 Ga0307414_100068683 381
237 3300032004 Ga0307414_10119547 Ga0307414_101195472 381
238 3300037312 Ga0395899_0001077 Ga0395899_0001077_17385_18530 381
239 3300037418 Ga0395900_0001393 Ga0395900_0001393_14879_16024 381
240 3300037418 Ga0395900_0003225 Ga0395900_0003225_13599_14744 381
241 3300037466 Ga0395898_0010162 Ga0395898_0010162_4298_5443 381
242 3300037471 Ga0395905_0006361 Ga0395905_0006361_5238_6383 381
243 3300038443 Ga0395901_0004032 Ga0395901_0004032_6053_7198 381
244 3300038443 Ga0395901_0082314 Ga0395901_0082314_2130_3284 381
245 3300046455 Ga0495603_0055106 Ga0495603_0055106_276_1433 381
246 3300046471 Ga0495650_0000185 Ga0495650_0000185_90380_91531 381
247 3300046471 Ga0495650_0052683 Ga0495650_0052683_420_1571 381
248 3300046491 Ga0495584_0022006 Ga0495584_0022006_1177_2334 381
249 3300046492 Ga0495585_0021416 Ga0495585_0021416_1655_2812 381
250 3300046507 Ga0495606_0000087 Ga0495606_0000087_122752_123939 381
251 3300046512 Ga0495610_0000126 Ga0495610_0000126_62681_63826 381
252 3300046512 Ga0495610_0000469 Ga0495610_0000469_1109_2254 381
253 3300046525 Ga0495663_0002136 Ga0495663_0002136_2448_3602 381
254 3300046535 Ga0495586_0089349 Ga0495586_0089349_88_1245 381
255 3300046558 Ga0495633_0002529 Ga0495633_0002529_10585_11754 381
256 3300046558 Ga0495633_0019940 Ga0495633_0019940_2145_3290 381
257 3300046558 Ga0495633_0106263 Ga0495633_0106263_91_1248 381
258 3300046674 Ga0495588_0039605 Ga0495588_0039605_784_1941 381
259 3300047318 Ga0495636_0009245 Ga0495636_0009245_854_2011 381
260 3300047323 Ga0495683_0016992 Ga0495683_0016992_700_1845 381
261 3300047444 Ga0495675_0023999 Ga0495675_0023999_1282_2439 381
262 3300047470 Ga0495681_0014690 Ga0495681_0014690_1269_2462 381
263 3300047673 Ga0495593_0017529 Ga0495593_0017529_302_1459 381
264 3300048915 Ga0496112_0055759 Ga0496112_0055759_1240_2421 381
265 3300048925 Ga0496122_0000746 Ga0496122_0000746_3179_4324 381
266 3300048925 Ga0496122_0059453 Ga0496122_0059453_552_1712 381
267 3300048926 Ga0496123_0035122 Ga0496123_0035122_1965_3110 381
268 3300048928 Ga0496125_0000710 Ga0496125_0000710_24269_25429 381
269 3300048928 Ga0496125_0022164 Ga0496125_0022164_1113_2258 381
270 3300048929 Ga0496126_0018678 Ga0496126_0018678_743_1903 381
271 3300049776 Ga0501280_003797 Ga0501280_003797_183_1328 381
272 iso_pu_bacteria 2643221596 2643993290 381
273 iso_pu_bacteria 2643221609 2644060663 381
274 iso_pu_bacteria 2643221611 2644073984 381
275 iso_pu_bacteria 2721755523 2722883928 381
276 iso_pu_bacteria 2738543012 2739242685 381
277 iso_pu_bacteria 2816332133 2816472996 381
278 iso_pu_bacteria 2839138175 2839141620 381
279 iso_pu_bacteria 2842718218 2842722095 381
280 iso_pu_bacteria 2919704043 2919705530 381
281 iso_pu_bacteria 2990710928 2990712276 381
282 2162886007 SwRhRL2b_contig_900558 SwRhRL2b_0956.00004540 382
283 3300003781 Ga0055536_1000709 Ga0055536_10007095 382
284 3300003791 Ga0055530_10000972 Ga0055530_100009725 382
285 3300005289 Ga0065704_10072265 Ga0065704_100722651 382
286 3300009174 Ga0105241_10021328 Ga0105241_100213282 382
287 3300009545 Ga0105237_10006679 Ga0105237_1000667912 382
288 3300010375 Ga0105239_10005819 Ga0105239_100058196 382
289 3300013102 Ga0157371_10000034 Ga0157371_1000003420 382
290 3300015682 Ga0183373_1010 Ga0183373_1010164 382
291 3300025913 Ga0207695_10000013 Ga0207695_10000013120 382
292 3300025914 Ga0207671_10005850 Ga0207671_1000585011 382
293 3300025935 Ga0207709_10000020 Ga0207709_10000020180 382
294 3300031731 Ga0307405_10000046 Ga0307405_1000004635 382
295 3300048919 Ga0496116_0001296 Ga0496116_0001296_18329_19477 382
296 3300048920 Ga0496117_0002610 Ga0496117_0002610_16003_17151 382
297 3300048925 Ga0496122_0090198 Ga0496122_0090198_108_1256 382
298 3300048926 Ga0496123_0027595 Ga0496123_0027595_1451_2599 382
299 iso_pu_bacteria 2842722452 2842726203 382

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

64

416

0.94

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

111

241

0.85

PF00266

Aminotran_5

Aminotransferase class-V

95

248

0.82

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

81

241

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u08-assembly1.cif.gz_A crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9857 7 382
1u08-assembly1.cif.gz_B crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9825 7 382
1u08-assembly1.cif.gz_B crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9671 7 382
2o0r-assembly1.cif.gz_B the three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis 0.9574 5 381
1v2d-assembly1.cif.gz_A-2 crystal structure of t.th hb8 glutamine aminotransferase 0.9462 16 381
ID Description Score Start End Superfamily
af_P77806_286_386_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9911 283 382 3.90.1150.10
af_P77806_47_284_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9878 45 279 3.40.640.10
af_A0A1D6I5Q5_168_402_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9789 44 275 3.40.640.10
1u08B01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9775 283 382 3.90.1150.10
af_P77806_286_386_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9718 283 382 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7H9F5E6-F1-model_v4 deleted 0.9901 5 382
AF-A0A1E5T4N5-F1-model_v4 Aminotransferase 0.9892 5 382 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-N6XFG0-F1-model_v4 Methionine aminotransferase 0.989 1 382 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A5C6M309-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9886 5 382 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A7C6JI12-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9878 1 379 GO:0005737
GO:0009058
GO:0016212
GO:0030170

Feature Viewer

pLDDT pTM Quality
94.14 0.92 High
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Predicted Structure (AlphaFold2)

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