F394728

General Info

Members Datasets Scaffolds Average Seq Length
299 222 599 466

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100061266|Ga0068853_1000612662
Length 498
Sequence MASKGARILVASNRGPVSFAVDESGTLTSKRGGGGLVSGLSAIGPEADAVWVCSALGDADREAVRRAPGGRLPSEATGGQRVRMLDIDADVHADAYNGIANSVLWFVHHMLYQTPLEPVFDAEFRRQWAAYETYNRAFAEALAEEADDGAAVLIQDYHLTLAPRMLRELRPDLRIGHFSHTPWAPREYFRMLPDDIRAQLVWGMLGADRLGFLTRRWADAFLQCAAGTDADRISVGVPAPGTAGLPYIEHTDTGRPPLHTTRVGVHGLGADAGFLRRRAHEPDVVERMRALREETGEGRKTIVRVDRTELSKNIVRGLLAYRELLDSWPEWRERVVHVAFAYPSRQDLAVYRDYTAEVRRVADEINAVYGTPGWKPVVLHVKDDFARSLAAYRLADVALVNPIRDGMNLVAKEVPVVSDEGCVLVLSREAGAYEELAEDAIAVNPYDVQGTAAALHTALVMPTGERTERTKRLADAATALPPTRWFLEQLAALEEERE

Samples

Sample ID Description Type Environment
1 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
7 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
8 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
9 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
10 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
11 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
12 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
13 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
14 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
15 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
16 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
17 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
18 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
19 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
20 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
26 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
27 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
28 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
29 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
30 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
31 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
32 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
33 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
34 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
35 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
36 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
37 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
38 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
39 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
40 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
41 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
42 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
43 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
44 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
45 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
46 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
47 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
48 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
49 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
50 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
51 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
52 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
53 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
54 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
55 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
56 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
57 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
58 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
59 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
60 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
61 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
62 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
63 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
64 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
69 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
70 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
71 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
72 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
73 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
74 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
75 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
76 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
77 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
80 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
84 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
85 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
86 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
87 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
88 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
89 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
92 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
93 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
94 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
97 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
98 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
99 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
100 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
104 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
105 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
108 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
113 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
117 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
120 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
137 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
138 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
139 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
140 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
141 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
142 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
143 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
144 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
145 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
146 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
147 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
148 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
149 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
150 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
151 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
152 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
153 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
154 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
155 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
156 2643221548 Streptomyces sp. Root55 Isolate Unclassified
157 2643221578 Streptomyces sp. Root63 Isolate Unclassified
158 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
159 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
160 2643221647 Streptomyces sp. Root369 Isolate Unclassified
161 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
162 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
163 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
164 2643221714 Streptomyces sp. Root264 Isolate Unclassified
165 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
166 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
167 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
168 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
169 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
170 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
171 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
172 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
173 2808606448 Streptomyces sp. 193411 Isolate Unclassified
174 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
175 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
176 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
177 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
178 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
179 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
180 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
181 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
182 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
183 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
184 2862574272 Streptomyces sp. AcE210 Isolate Nodule
185 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
186 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
187 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
188 2867428634 Streptomyces sp. RP5T Isolate Unclassified
189 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
190 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
191 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
192 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
193 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
194 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
195 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
196 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
197 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
198 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
199 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
200 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
201 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
202 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
203 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
204 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
205 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
206 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
207 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
208 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
209 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
210 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
211 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
212 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
213 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
214 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
215 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
216 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
217 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
218 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
219 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
220 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
221 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
222 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.58
Metatranscriptomes 0.67
Isolates 24.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.02
Nodule 1
Rhizoplane 0.67
Rhizosphere 70.9
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068853_100061266 3300005539 Bacteria 3254
2 rootH1_10001920 3300003316 Bacteria 14258
3 rootH1_10001920 3300003323 Bacteria 12125
4 rootH2_10041099 3300003320 Bacteria 2555
5 rootH1_10021847 3300003323 Bacteria 5080
6 rootH1_10105850 3300003323 Bacteria 2162
7 Ga0006562J51391_1043671 3300003578 Bacteria 2220
8 Ga0006562J51391_1106531 3300003578 Bacteria 5406
9 Ga0068858_100000001 3300005842 Bacteria 417735
10 Ga0075365_10052933 3300006038 Bacteria 2687
11 Ga0075368_10009506 3300006042 Bacteria 3496
12 Ga0075363_100013967 3300006048 Bacteria 3910
13 Ga0075367_10000717 3300006178 Bacteria 12816
14 Ga0105251_10020121 3300009011 Bacteria 3512
15 Ga0105248_10001617 3300009177 Bacteria 25013
16 Ga0105246_10004452 3300011119 Bacteria 8528
17 Ga0157372_10160266 3300013307 Bacteria 2600
18 Ga0182008_10001280 3300014497 Bacteria 17261
19 Ga0157379_10000059 3300014968 Bacteria 69772
20 Ga0182007_10000582 3300015262 Bacteria 21489
21 Ga0183367_1005 3300015688 Bacteria 652063
22 Ga0209758_1006604 3300025297 Bacteria 8222
23 Ga0207647_10010061 3300025904 Bacteria 6691
24 Ga0207691_10304601 3300025940 Bacteria 1368
25 Ga0207711_10019248 3300025941 Bacteria 5684
26 Ga0207703_10000007 3300026035 Bacteria 418220
27 Ga0207639_10053206 3300026041 Bacteria 3088
28 Ga0307517_10003190 3300028786 Bacteria 25757
29 Ga0307517_10008703 3300028786 Bacteria 14521
30 Ga0307517_10060246 3300028786 Bacteria 3617
31 Ga0307515_10005593 3300028794 Bacteria 25395
32 Ga0307515_10150052 3300028794 Bacteria 2442
33 Ga0307511_10000262 3300030521 Bacteria 54437
34 Ga0307511_10067967 3300030521 Bacteria 2637
35 Ga0307511_10070093 3300030521 Bacteria 2570
36 Ga0307512_10004180 3300030522 Bacteria 16012
37 Ga0307512_10028766 3300030522 Bacteria 4865
38 Ga0307513_10034392 3300031456 Bacteria 5689
39 Ga0307513_10159734 3300031456 Bacteria 2148
40 Ga0307509_10009190 3300031507 Bacteria 12410
41 Ga0307509_10024253 3300031507 Bacteria 6795
42 Ga0307514_10078863 3300031649 Bacteria 2443
43 Ga0307516_10005149 3300031730 Bacteria 15777
44 Ga0307516_10058324 3300031730 Bacteria 3758
45 Ga0307516_10063873 3300031730 Bacteria 3563
46 Ga0307407_10150716 3300031903 Bacteria 1511
47 Ga0307416_100277638 3300032002 Bacteria 1650
48 Ga0307507_10000013 3300033179 Bacteria 242708
49 Ga0307507_10014045 3300033179 Bacteria 9615
50 Ga0307507_10020957 3300033179 Bacteria 7298
51 Ga0307507_10088972 3300033179 Bacteria 2660
52 Ga0307510_10039340 3300033180 Bacteria 5211
53 Ga0395900_0156806 3300037418 Bacteria 2325
54 Ga0395905_0170753 3300037471 Bacteria 2043
55 Ga0395901_0031387 3300038443 Bacteria 5479
56 Ga0439436_0000524 3300041404 Bacteria 10046
57 Ga0439436_0017865 3300041404 Bacteria 2122
58 Ga0451853_0014528 3300041512 Bacteria 3604
59 Ga0451853_0971144 3300041512 Bacteria 3906
60 Ga0439448_0001950 3300042005 Bacteria 5504
61 Ga0439449_0001748 3300042007 Bacteria 8547
62 Ga0439449_0015159 3300042007 Bacteria 2896
63 Ga0439455_0002130 3300042012 Bacteria 3537
64 Ga0439457_001024 3300042014 Bacteria 8432
65 Ga0450894_000035 3300042131 Bacteria 19542
66 Ga0450898_000115 3300042134 Bacteria 7600
67 Ga0450899_000155 3300042135 Bacteria 6593
68 Ga0450902_001916 3300042137 Bacteria 2898
69 Ga0450903_000067 3300042138 Bacteria 20805
70 Ga0450906_001157 3300042145 Bacteria 5825
71 Ga0439458_0000619 3300042157 Bacteria 9188
72 Ga0450901_001695 3300042533 Bacteria 2478
73 Ga0466969_0005328 3300044656 Bacteria 6841
74 Ga0466969_0006155 3300044656 Bacteria 6389
75 Ga0466969_0007813 3300044656 Bacteria 5687
76 Ga0466972_0015325 3300044658 Bacteria 3832
77 Ga0466965_0000512 3300044683 Bacteria 13809
78 Ga0466965_0005568 3300044683 Bacteria 5682
79 Ga0466966_0006270 3300044684 Bacteria 7866
80 Ga0466966_0045560 3300044684 Bacteria 2803
81 Ga0466961_0003886 3300044693 Bacteria 9335
82 Ga0466961_0104815 3300044693 Bacteria 1780
83 Ga0466963_0001071 3300044694 Bacteria 14271
84 Ga0466963_0004817 3300044694 Bacteria 7868
85 Ga0466963_0026346 3300044694 Bacteria 3718
86 Ga0466964_0008148 3300044706 Bacteria 3933
87 Ga0466971_0000608 3300044719 Bacteria 14248
88 Ga0466971_0000730 3300044719 Bacteria 13160
89 Ga0466971_0050056 3300044719 Bacteria 1880
90 Ga0466968_0010952 3300044735 Bacteria 3525
91 Ga0466970_0002624 3300044765 Bacteria 8668
92 Ga0466970_0008818 3300044765 Bacteria 5081
93 Ga0466957_0005491 3300044842 Bacteria 7115
94 Ga0466959_0000507 3300045049 Bacteria 22618
95 Ga0466959_0002551 3300045049 Bacteria 11686
96 Ga0466959_0153408 3300045049 Bacteria 1622
97 Ga0466958_0001076 3300045836 Bacteria 12546
98 Ga0466967_0007993 3300045976 Bacteria 7701
99 Ga0466967_0009089 3300045976 Bacteria 7348
100 Ga0466967_0011149 3300045976 Bacteria 6791
101 Ga0495627_020509 3300046453 Bacteria 2202
102 Ga0495592_0042026 3300046454 Bacteria 3424
103 Ga0495592_0061935 3300046454 Bacteria 2748
104 Ga0495603_0003315 3300046455 Bacteria 9584
105 Ga0495603_0010028 3300046455 Bacteria 5731
106 Ga0495603_0015705 3300046455 Bacteria 4580
107 Ga0495603_0040009 3300046455 Bacteria 2807
108 Ga0495629_0000848 3300046459 Bacteria 24687
109 Ga0495629_0008842 3300046459 Bacteria 7404
110 Ga0495629_0012499 3300046459 Bacteria 6149
111 Ga0495629_0015724 3300046459 Bacteria 5432
112 Ga0495629_0026299 3300046459 Bacteria 4135
113 Ga0495638_0016557 3300046460 Bacteria 4935
114 Ga0495638_0068779 3300046460 Bacteria 2171
115 Ga0495641_0064762 3300046461 Bacteria 1646
116 Ga0495651_0000079 3300046462 Bacteria 71581
117 Ga0495651_0001723 3300046462 Bacteria 16877
118 Ga0495662_0002144 3300046476 Bacteria 9906
119 Ga0495662_0055006 3300046476 Bacteria 1922
120 Ga0495664_0014332 3300046477 Bacteria 4492
121 Ga0495594_0000685 3300046499 Bacteria 17457
122 Ga0495594_0072066 3300046499 Bacteria 1921
123 Ga0495606_0046127 3300046507 Bacteria 2882
124 Ga0495610_0021231 3300046512 Bacteria 3576
125 Ga0495618_0015617 3300046514 Bacteria 4635
126 Ga0495618_0054759 3300046514 Bacteria 2525
127 Ga0495628_0010042 3300046516 Bacteria 8055
128 Ga0495628_0075295 3300046516 Bacteria 2629
129 Ga0495630_0005594 3300046517 Bacteria 8875
130 Ga0495631_0002692 3300046518 Bacteria 9871
131 Ga0495643_0017090 3300046522 Bacteria 4247
132 Ga0495644_0039944 3300046523 Bacteria 1769
133 Ga0495648_0063833 3300046524 Bacteria 2172
134 Ga0495666_0017558 3300046526 Bacteria 3563
135 Ga0495666_0058660 3300046526 Bacteria 1841
136 Ga0495652_0003588 3300046529 Bacteria 15221
137 Ga0495652_0024135 3300046529 Bacteria 5385
138 Ga0495652_0034114 3300046529 Bacteria 4437
139 Ga0495654_0040386 3300046530 Bacteria 2325
140 Ga0495640_0018110 3300046533 Bacteria 5233
141 Ga0495640_0019728 3300046533 Bacteria 4972
142 Ga0495587_0066828 3300046536 Bacteria 2096
143 Ga0495609_0022335 3300046538 Bacteria 2914
144 Ga0495622_0004732 3300046557 Bacteria 6301
145 Ga0495634_0001585 3300046642 Bacteria 19972
146 Ga0495625_0020856 3300046660 Bacteria 5052
147 Ga0495625_0045784 3300046660 Bacteria 3160
148 Ga0495635_0025384 3300046663 Bacteria 4127
149 Ga0495635_0079946 3300046663 Bacteria 2237
150 Ga0495661_0045759 3300046665 Bacteria 2674
151 Ga0495588_0002099 3300046674 Bacteria 8549
152 Ga0495588_0056375 3300046674 Bacteria 2028
153 Ga0495623_0003796 3300046679 Bacteria 9951
154 Ga0495623_0105572 3300046679 Bacteria 1712
155 Ga0495646_0000882 3300046680 Bacteria 17025
156 Ga0495658_0022205 3300046683 Bacteria 3353
157 Ga0495613_0002932 3300046689 Bacteria 12776
158 Ga0495613_0013495 3300046689 Bacteria 6068
159 Ga0495670_0066942 3300046691 Bacteria 1813
160 Ga0495671_0001574 3300046692 Bacteria 15105
161 Ga0495589_0015260 3300046794 Bacteria 3954
162 Ga0495589_0017375 3300046794 Bacteria 3692
163 Ga0495589_0033246 3300046794 Bacteria 2591
164 Ga0495589_0046264 3300046794 Bacteria 2160
165 Ga0495600_0008443 3300046809 Bacteria 6327
166 Ga0495600_0012553 3300046809 Bacteria 5300
167 Ga0495660_0023773 3300046810 Bacteria 3494
168 Ga0495581_0008483 3300047315 Bacteria 5959
169 Ga0495581_0027583 3300047315 Bacteria 3293
170 Ga0495604_0010057 3300047317 Bacteria 7488
171 Ga0495636_0001927 3300047318 Bacteria 7940
172 Ga0495636_0008960 3300047318 Bacteria 3940
173 Ga0495674_0026242 3300047319 Bacteria 5333
174 Ga0495676_0004818 3300047321 Bacteria 12369
175 Ga0495676_0011812 3300047321 Bacteria 7877
176 Ga0495676_0031877 3300047321 Bacteria 4452
177 Ga0495676_0045469 3300047321 Bacteria 3572
178 Ga0495680_0006200 3300047322 Bacteria 11145
179 Ga0495687_001373 3300047443 Bacteria 22509
180 Ga0495687_010834 3300047443 Bacteria 4956
181 Ga0495675_0010151 3300047444 Bacteria 5873
182 Ga0495675_0017712 3300047444 Bacteria 4516
183 Ga0495685_009286 3300047447 Bacteria 3280
184 Ga0495685_010442 3300047447 Bacteria 3114
185 Ga0495681_0000410 3300047470 Bacteria 33110
186 Ga0495681_0009082 3300047470 Bacteria 6161
187 Ga0495686_0017745 3300047472 Bacteria 4790
188 Ga0495593_0012766 3300047673 Bacteria 4796
189 Ga0495593_0040807 3300047673 Bacteria 2497
190 Ga0495614_0002050 3300048089 Bacteria 8863
191 Ga0496106_0072699 3300048909 Bacteria 2630
192 Ga0496109_0014763 3300048912 Bacteria 6796
193 Ga0496126_0168496 3300048929 Bacteria 1868
194 Ga0501032_0081795 3300049569 Bacteria 2149
195 Ga0501033_0176608 3300049570 Bacteria 1532
196 Ga0501034_0308535 3300049571 Bacteria 1517
197 Ga0501036_0012858 3300049572 Bacteria 6948
198 Ga0501036_0086648 3300049572 Bacteria 2647
199 Ga0501037_0033524 3300049573 Bacteria 3792
200 Ga0501037_0115777 3300049573 Bacteria 1929
201 Ga0501039_0030644 3300049575 Bacteria 4148
202 Ga0501043_0012217 3300049579 Bacteria 6713
203 Ga0501047_0057041 3300049581 Bacteria 3777
204 Ga0501047_0090060 3300049581 Bacteria 2945
205 Ga0501070_0129336 3300049586 Bacteria 2086
206 Ga0501074_0006705 3300049590 Bacteria 8310
207 Ga0501035_0045195 3300049822 Bacteria 3962
208 Ga0501035_0070765 3300049822 Bacteria 3089
209 Ga0501044_0016313 3300049823 Bacteria 7979
210 Ga0501044_0074281 3300049823 Bacteria 3454
211 nmdc:mga06z11_629_c1 3300050494 Bacteria 12831
212 Ga0500640_012467 3300053095 Bacteria 3492
213 Ga0500553_031766 3300053101 Bacteria 2632
214 Ga0500560_001166 3300053107 Bacteria 4352
215 Ga0500560_003650 3300053107 Bacteria 3147
216 Ga0500572_002306 3300053111 Bacteria 4619
217 Ga0500608_080318 3300053122 Bacteria 1539
218 Ga0500614_013981 3300053123 Bacteria 1770
219 Ga0500628_003069 3300053129 Bacteria 2748
220 Ga0500600_0059517 3300053149 Bacteria 2135
221 Ga0500624_001243 3300053157 Bacteria 4505
222 Ga0500634_0112101 3300053161 Bacteria 1344
223 Ga0500656_001570 3300053732 Bacteria 1987
224 Ga0466962_0002060 3300061719 Bacteria 9516
225 Ga0466962_0003215 3300061719 Bacteria 7762
226 Ga0466962_0042008 3300061719 Bacteria 2188
227 2547408189 2547132111 Bacteria 8013147
228 2554257756 2554235005 Bacteria 6457341
229 2585299228 2582581312 Bacteria 7308206
230 2585308881 2582581313 Bacteria 10042643
231 2585313568 2582581314 Bacteria 11452267
232 2616694998 2616644814 Bacteria 11555299
233 2616904554 2616644941 Bacteria 8510691
234 2643765034 2643221548 Bacteria 8053412
235 2643900760 2643221578 Bacteria 9213798
236 2644017129 2643221601 Bacteria 7493239
237 2644173910 2643221631 Bacteria 8168043
238 2644262372 2643221647 Bacteria 10741251
239 2644405019 2643221673 Bacteria 9196637
240 2644437226 2643221678 Bacteria 9540101
241 2644461127 2643221682 Bacteria 6743283
242 2644628964 2643221714 Bacteria 9015452
243 2768643508 2767802112 Bacteria 6465194
244 2784588650 2784132148 Bacteria 8627943
245 2785343202 2784746763 Bacteria 9783172
246 2785369593 2784746768 Bacteria 10036182
247 2786670683 2786546132 Bacteria 10419719
248 2799185807 2799112218 Bacteria 4315149
249 2808842126 2808606359 Bacteria 9866990
250 2808920649 2808606375 Bacteria 9466072
251 2809232260 2808606448 Bacteria 8656184
252 2811849131 2808606982 Bacteria 7791042
253 2812358004 2811994879 Bacteria 9313447
254 2812480448 2811994917 Bacteria 7761064
255 2819695488 2818991463 Bacteria 7948711
256 2852636572 2852635781 Bacteria 8251373
257 2862179393 2862178590 Bacteria 8583590
258 2862285739 2862281513 Bacteria 9621493
259 2862294828 2862290372 Bacteria 7471434
260 2862392149 2862382967 Bacteria 10317375
261 2862511728 2862507626 Bacteria 9425308
262 2862579174 2862574272 Bacteria 10567477
263 2862709364 2862705112 Bacteria 6563286
264 2863404513 2863404153 Bacteria 9672205
265 2867348903 2867346516 Bacteria 7608576
266 2867434857 2867428634 Bacteria 9590268
267 2873155651 2873151551 Bacteria 8625867
268 2875395634 2875391855 Bacteria 7600475
269 2877681034 2877676314 Bacteria 9512378
270 2912719862 2912715099 Bacteria 9460473
271 2912760865 2912757875 Bacteria 7940295
272 2919469447 2919468124 Bacteria 9133025
273 2946049004 2946045630 Bacteria 8527308
274 2946067839 2946064051 Bacteria 8957905
275 2946075981 2946072368 Bacteria 8999607
276 2947229156 2947224130 Bacteria 9938529
277 2954007292 2954002825 Bacteria 9173742
278 2954386143 2954380949 Bacteria 10050426
279 2954677007 2954673503 Bacteria 9685905
280 2954687150 2954682443 Bacteria 9862841
281 2954696781 2954691527 Bacteria 10720516
282 2954705357 2954701450 Bacteria 10834262
283 2954716160 2954711539 Bacteria 10867210
284 2954726103 2954721474 Bacteria 10456478
285 2954735707 2954731030 Bacteria 10243860
286 2954745029 2954740390 Bacteria 10229294
287 2954754563 2954749733 Bacteria 10366972
288 2954764001 2954759201 Bacteria 9358192
289 2966601727 2966598605 Bacteria 7676064
290 2990048075 2990044586 Bacteria 6603797
291 2990063171 2990059506 Bacteria 9321252
292 3006399687 3006393351 Bacteria 6615579
293 3006500832 3006493962 Bacteria 8825450
294 8008488618 8008485437 Bacteria 7198341
295 8008567196 8008558824 Bacteria 10610750
296 8023629817 8023623736 Bacteria 8593882
297 8025527394 8025524527 Bacteria 7197316
298 8025537937 8025530807 Bacteria 8495698
299 8048412662 8048406513 Bacteria 8936924
300 8056833544 8056829672 Bacteria 9045328
301 Ga0068853_100061266
302 rootH1_10001920
303 rootH2_10041099
304 rootH1_10021847
305 rootH1_10105850
306 Ga0006562J51391_1043671
307 Ga0006562J51391_1106531
308 Ga0068858_100000001
309 Ga0075365_10052933
310 Ga0075368_10009506
311 Ga0075363_100013967
312 Ga0075367_10000717
313 Ga0105251_10020121
314 Ga0105248_10001617
315 Ga0105246_10004452
316 Ga0157372_10160266
317 Ga0182008_10001280
318 Ga0157379_10000059
319 Ga0182007_10000582
320 Ga0183367_1005
321 Ga0209758_1006604
322 Ga0207647_10010061
323 Ga0207691_10304601
324 Ga0207711_10019248
325 Ga0207703_10000007
326 Ga0207639_10053206
327 Ga0307517_10003190
328 Ga0307517_10008703
329 Ga0307517_10060246
330 Ga0307515_10005593
331 Ga0307515_10150052
332 Ga0307511_10000262
333 Ga0307511_10067967
334 Ga0307511_10070093
335 Ga0307512_10004180
336 Ga0307512_10028766
337 Ga0307513_10034392
338 Ga0307513_10159734
339 Ga0307509_10009190
340 Ga0307509_10024253
341 Ga0307514_10078863
342 Ga0307516_10005149
343 Ga0307516_10058324
344 Ga0307516_10063873
345 Ga0307407_10150716
346 Ga0307416_100277638
347 Ga0307507_10000013
348 Ga0307507_10014045
349 Ga0307507_10020957
350 Ga0307507_10088972
351 Ga0307510_10039340
352 Ga0395900_0156806
353 Ga0395905_0170753
354 Ga0395901_0031387
355 Ga0439436_0000524
356 Ga0439436_0017865
357 Ga0451853_0014528
358 Ga0451853_0971144
359 Ga0439448_0001950
360 Ga0439449_0001748
361 Ga0439449_0015159
362 Ga0439455_0002130
363 Ga0439457_001024
364 Ga0450894_000035
365 Ga0450898_000115
366 Ga0450899_000155
367 Ga0450902_001916
368 Ga0450903_000067
369 Ga0450906_001157
370 Ga0439458_0000619
371 Ga0450901_001695
372 Ga0466969_0005328
373 Ga0466969_0006155
374 Ga0466969_0007813
375 Ga0466972_0015325
376 Ga0466965_0000512
377 Ga0466965_0005568
378 Ga0466966_0006270
379 Ga0466966_0045560
380 Ga0466961_0003886
381 Ga0466961_0104815
382 Ga0466963_0001071
383 Ga0466963_0004817
384 Ga0466963_0026346
385 Ga0466964_0008148
386 Ga0466971_0000608
387 Ga0466971_0000730
388 Ga0466971_0050056
389 Ga0466968_0010952
390 Ga0466970_0002624
391 Ga0466970_0008818
392 Ga0466957_0005491
393 Ga0466959_0000507
394 Ga0466959_0002551
395 Ga0466959_0153408
396 Ga0466958_0001076
397 Ga0466967_0007993
398 Ga0466967_0009089
399 Ga0466967_0011149
400 Ga0495627_020509
401 Ga0495592_0042026
402 Ga0495592_0061935
403 Ga0495603_0003315
404 Ga0495603_0010028
405 Ga0495603_0015705
406 Ga0495603_0040009
407 Ga0495629_0000848
408 Ga0495629_0008842
409 Ga0495629_0012499
410 Ga0495629_0015724
411 Ga0495629_0026299
412 Ga0495638_0016557
413 Ga0495638_0068779
414 Ga0495641_0064762
415 Ga0495651_0000079
416 Ga0495651_0001723
417 Ga0495662_0002144
418 Ga0495662_0055006
419 Ga0495664_0014332
420 Ga0495594_0000685
421 Ga0495594_0072066
422 Ga0495606_0046127
423 Ga0495610_0021231
424 Ga0495618_0015617
425 Ga0495618_0054759
426 Ga0495628_0010042
427 Ga0495628_0075295
428 Ga0495630_0005594
429 Ga0495631_0002692
430 Ga0495643_0017090
431 Ga0495644_0039944
432 Ga0495648_0063833
433 Ga0495666_0017558
434 Ga0495666_0058660
435 Ga0495652_0003588
436 Ga0495652_0024135
437 Ga0495652_0034114
438 Ga0495654_0040386
439 Ga0495640_0018110
440 Ga0495640_0019728
441 Ga0495587_0066828
442 Ga0495609_0022335
443 Ga0495622_0004732
444 Ga0495634_0001585
445 Ga0495625_0020856
446 Ga0495625_0045784
447 Ga0495635_0025384
448 Ga0495635_0079946
449 Ga0495661_0045759
450 Ga0495588_0002099
451 Ga0495588_0056375
452 Ga0495623_0003796
453 Ga0495623_0105572
454 Ga0495646_0000882
455 Ga0495658_0022205
456 Ga0495613_0002932
457 Ga0495613_0013495
458 Ga0495670_0066942
459 Ga0495671_0001574
460 Ga0495589_0015260
461 Ga0495589_0017375
462 Ga0495589_0033246
463 Ga0495589_0046264
464 Ga0495600_0008443
465 Ga0495600_0012553
466 Ga0495660_0023773
467 Ga0495581_0008483
468 Ga0495581_0027583
469 Ga0495604_0010057
470 Ga0495636_0001927
471 Ga0495636_0008960
472 Ga0495674_0026242
473 Ga0495676_0004818
474 Ga0495676_0011812
475 Ga0495676_0031877
476 Ga0495676_0045469
477 Ga0495680_0006200
478 Ga0495687_001373
479 Ga0495687_010834
480 Ga0495675_0010151
481 Ga0495675_0017712
482 Ga0495685_009286
483 Ga0495685_010442
484 Ga0495681_0000410
485 Ga0495681_0009082
486 Ga0495686_0017745
487 Ga0495593_0012766
488 Ga0495593_0040807
489 Ga0495614_0002050
490 Ga0496106_0072699
491 Ga0496109_0014763
492 Ga0496126_0168496
493 Ga0501032_0081795
494 Ga0501033_0176608
495 Ga0501034_0308535
496 Ga0501036_0012858
497 Ga0501036_0086648
498 Ga0501037_0033524
499 Ga0501037_0115777
500 Ga0501039_0030644
501 Ga0501043_0012217
502 Ga0501047_0057041
503 Ga0501047_0090060
504 Ga0501070_0129336
505 Ga0501074_0006705
506 Ga0501035_0045195
507 Ga0501035_0070765
508 Ga0501044_0016313
509 Ga0501044_0074281
510 nmdc:mga06z11_629_c1
511 Ga0500640_012467
512 Ga0500553_031766
513 Ga0500560_001166
514 Ga0500560_003650
515 Ga0500572_002306
516 Ga0500608_080318
517 Ga0500614_013981
518 Ga0500628_003069
519 Ga0500600_0059517
520 Ga0500624_001243
521 Ga0500634_0112101
522 Ga0500656_001570
523 Ga0466962_0002060
524 Ga0466962_0003215
525 Ga0466962_0042008
526 2547408189
527 2554257756
528 2585299228
529 2585308881
530 2585313568
531 2616694998
532 2616904554
533 2643765034
534 2643900760
535 2644017129
536 2644173910
537 2644262372
538 2644405019
539 2644437226
540 2644461127
541 2644628964
542 2768643508
543 2784588650
544 2785343202
545 2785369593
546 2786670683
547 2799185807
548 2808842126
549 2808920649
550 2809232260
551 2811849131
552 2812358004
553 2812480448
554 2819695488
555 2852636572
556 2862179393
557 2862285739
558 2862294828
559 2862392149
560 2862511728
561 2862579174
562 2862709364
563 2863404513
564 2867348903
565 2867434857
566 2873155651
567 2875395634
568 2877681034
569 2912719862
570 2912760865
571 2919469447
572 2946049004
573 2946067839
574 2946075981
575 2947229156
576 2954007292
577 2954386143
578 2954677007
579 2954687150
580 2954696781
581 2954705357
582 2954716160
583 2954726103
584 2954735707
585 2954745029
586 2954754563
587 2954764001
588 2966601727
589 2990048075
590 2990063171
591 3006399687
592 3006500832
593 8008488618
594 8008567196
595 8023629817
596 8025527394
597 8025537937
598 8048412662
599 8056833544

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00982

Glyco_transf_20

Glycosyltransferase family 20

6

495

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lqd-assembly2.cif.gz_D trehalose-6-phosphate synthase, gdp-glucose-dependent otsa 0.9273 5 441
5lqd-assembly2.cif.gz_D trehalose-6-phosphate synthase, gdp-glucose-dependent otsa 0.9151 5 441
5lqd-assembly2.cif.gz_B trehalose-6-phosphate synthase, gdp-glucose-dependent otsa 0.9024 5 440
5lqd-assembly2.cif.gz_B trehalose-6-phosphate synthase, gdp-glucose-dependent otsa 0.8984 5 440
5hut-assembly1.cif.gz_A structure of candida albicans trehalose-6-phosphate synthase in complex with udp-glucose 0.8734 6 442
ID Description Score Start End Superfamily
5lqdD02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9659 220 425 3.40.50.2000
5lqdD02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9522 220 425 3.40.50.2000
3vdnB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9238 244 424 3.40.50.2000
af_Q9Y119_299_464_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.921 246 408 3.40.50.2000
af_K7USG6_224_435_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9177 226 424 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A6G2UJA0-F1-model_v4 Trehalose-6-phosphate synthase 0.979 130 442 GO:0003825
GO:0004805
GO:0005829
GO:0005992
GO:0070413
AF-A0A352XQG0-F1-model_v4 Trehalose-6-phosphate synthase 0.9592 245 441 GO:0003825
GO:0004805
GO:0005829
GO:0005992
GO:0070413
AF-A0A3N5S618-F1-model_v4 Trehalose-6-phosphate synthase 0.9588 218 441 GO:0003825
GO:0004805
GO:0005829
GO:0005992
GO:0070413
AF-A0A538FA37-F1-model_v4 Uncharacterized protein 0.9586 254 439 GO:0003825
GO:0004805
GO:0005829
GO:0005992
GO:0070413
AF-X1P6K3-F1-model_v4 Uncharacterized protein 0.9579 209 441 GO:0003825
GO:0005992

Map