F394376

General Info

Members Datasets Scaffolds Average Seq Length
298 203 596 230

Family's Representative Sequence

Representative Sequence 3300036401|Ga0373937_0008623|Ga0373937_0008623_1278_2117
Length 273
Sequence MRLVQWISRRALGSIVQKLNPADTDSELAARAIQPVRSDDRIWEARVMAEGGYNQFCPVAMAAEVLGTRWTLVLLRELVAGSRRFNELRRGVPRMSPALLSKRLKDLESASVVSRHQVKGEPGVFEYRLTDSGRELKPVIEAIGCWGQRWVETGASLDNLDPNLLMWDMRRNIDPTPMPDRRTTIQFIYSDLKKAQQNYWLVVEPGEEVDLCSIDLYLSTDLRTMTEIWMGYTTIARAKQQGRLVPTGNRKLESQMDTWLKLSPFAKVKKLVA

Samples

Sample ID Description Type Environment
1 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
102 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
103 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
104 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
105 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
106 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
107 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
108 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
109 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
110 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
112 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
123 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
124 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
125 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
126 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
127 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
128 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
129 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
130 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
135 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
136 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
137 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
140 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
141 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
144 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
145 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
146 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
147 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
150 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
151 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
156 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
157 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
158 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
163 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
164 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
179 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
180 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
181 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
182 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
184 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
185 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
186 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
187 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
188 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
189 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
190 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
191 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
192 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
193 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
194 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
195 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
196 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
197 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
198 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
199 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
200 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
201 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
202 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
203 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.32
Metatranscriptomes 0.34
Isolates 1.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.03
Nodule 0.67
Rhizoplane 2.68
Rhizosphere 90.6
Stem 0
Stem Tuber 0
Unclassified 18.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373937_0008623 3300036401 Bacteria 8855
2 Ga0068869_100025035 3300005334 Unclassified 4140
3 Ga0070680_100079917 3300005336 Bacteria 2696
4 Ga0070680_100256718 3300005336 Bacteria 1478
5 Ga0070680_100321743 3300005336 Bacteria 1313
6 Ga0070682_100084240 3300005337 Bacteria 2065
7 Ga0070675_100010247 3300005354 Bacteria 7313
8 Ga0070671_100285209 3300005355 Bacteria 1405
9 Ga0070671_100923422 3300005355 Unclassified 763
10 Ga0070674_100034222 3300005356 Plasmid 3391
11 Ga0070673_100102691 3300005364 Unclassified 2357
12 Ga0070659_100054520 3300005366 Bacteria 3149
13 Ga0070659_100126679 3300005366 Bacteria 2072
14 Ga0070667_100284404 3300005367 Unclassified 1486
15 Ga0070714_100038714 3300005435 Bacteria 4010
16 Ga0070714_100106478 3300005435 Bacteria 2477
17 Ga0070714_100115083 3300005435 Bacteria 2387
18 Ga0070714_100220955 3300005435 Unclassified 1741
19 Ga0070714_100539353 3300005435 Bacteria 1116
20 Ga0070713_100042652 3300005436 Bacteria 3704
21 Ga0070713_100100920 3300005436 Bacteria 2499
22 Ga0070713_100924919 3300005436 Unclassified 839
23 Ga0070710_10076916 3300005437 Bacteria 1938
24 Ga0070711_100032919 3300005439 Bacteria 3450
25 Ga0070700_100192935 3300005441 Bacteria 1425
26 Ga0070694_100470912 3300005444 Unclassified 995
27 Ga0070663_100126813 3300005455 Bacteria 1934
28 Ga0070678_100185122 3300005456 Bacteria 1708
29 Ga0070662_100439662 3300005457 Unclassified 1081
30 Ga0070681_10197647 3300005458 Bacteria 1929
31 Ga0070681_10247681 3300005458 Bacteria 1695
32 Ga0068867_100011210 3300005459 Bacteria 6324
33 Ga0070698_100048074 3300005471 Bacteria 4359
34 Ga0070679_100035713 3300005530 Bacteria 4931
35 Ga0070679_100041572 3300005530 Bacteria 4575
36 Ga0070679_100367828 3300005530 Bacteria 1385
37 Ga0068853_100038344 3300005539 Bacteria 4081
38 Ga0070672_100224799 3300005543 Unclassified 1575
39 Ga0070696_100691257 3300005546 Bacteria 831
40 Ga0070693_100010628 3300005547 Bacteria 4615
41 Ga0068855_100263553 3300005563 Bacteria 1919
42 Ga0068855_100682492 3300005563 Bacteria 1101
43 Ga0068857_100020105 3300005577 Bacteria 5870
44 Ga0068857_100065975 3300005577 Bacteria 3220
45 Ga0068856_100005308 3300005614 Bacteria 12719
46 Ga0068856_100167480 3300005614 Bacteria 2209
47 Ga0068866_10248642 3300005718 Unclassified 1087
48 Ga0068870_10104890 3300005840 Unclassified 1604
49 Ga0068862_100192436 3300005844 Bacteria 1836
50 Ga0081455_10231945 3300005937 Bacteria 1362
51 Ga0070717_10020867 3300006028 Bacteria 5157
52 Ga0070717_10111163 3300006028 Bacteria 2338
53 Ga0075363_100122774 3300006048 Bacteria 1452
54 Ga0075363_100284073 3300006048 Unclassified 958
55 Ga0075364_10138389 3300006051 Bacteria 1636
56 Ga0070715_10056823 3300006163 Bacteria 1703
57 Ga0070712_100003212 3300006175 Bacteria 10070
58 Ga0070712_100038512 3300006175 Bacteria 3268
59 Ga0070712_100096006 3300006175 Bacteria 2182
60 Ga0070712_100317643 3300006175 Bacteria 1266
61 Ga0070712_100480071 3300006175 Bacteria 1039
62 Ga0075367_10019699 3300006178 Bacteria 3745
63 Ga0097621_100188130 3300006237 Bacteria 1787
64 Ga0075370_10064472 3300006353 Bacteria 2089
65 Ga0075428_100407352 3300006844 Bacteria 1457
66 Ga0075430_100693527 3300006846 Bacteria 839
67 Ga0075434_100031117 3300006871 Bacteria 5260
68 Ga0099795_10007432 3300007788 Unclassified 3059
69 Ga0099795_10177356 3300007788 Bacteria 888
70 Ga0111539_10726289 3300009094 Bacteria 1156
71 Ga0105245_10034499 3300009098 Unclassified 4489
72 Ga0105247_10095735 3300009101 Unclassified 1891
73 Ga0114129_10038116 3300009147 Bacteria 6782
74 Ga0114129_10038878 3300009147 Bacteria 6707
75 Ga0114129_10044039 3300009147 Bacteria 6279
76 Ga0105243_10085371 3300009148 Bacteria 2587
77 Ga0105241_10025330 3300009174 Bacteria 4408
78 Ga0105241_10111128 3300009174 Unclassified 2193
79 Ga0105242_10471836 3300009176 Unclassified 1187
80 Ga0105248_10218378 3300009177 Unclassified 2147
81 Ga0105237_10232247 3300009545 Bacteria 1845
82 Ga0105237_10403849 3300009545 Bacteria 1371
83 Ga0105237_11211334 3300009545 Bacteria 761
84 Ga0105238_10764543 3300009551 Bacteria 981
85 Ga0099796_10026480 3300010159 Unclassified 1842
86 Ga0105239_10083494 3300010375 Unclassified 3518
87 Ga0105246_10155185 3300011119 Unclassified 1738
88 Ga0157373_10030423 3300013100 Bacteria 3886
89 Ga0157370_10078333 3300013104 Bacteria 3113
90 Ga0157370_10207926 3300013104 Bacteria 1814
91 Ga0157369_10069692 3300013105 Bacteria 3778
92 Ga0157369_10213317 3300013105 Bacteria 2023
93 Ga0157374_10441781 3300013296 Bacteria 1301
94 Ga0157375_10117246 3300013308 Plasmid 2768
95 Ga0157375_10292734 3300013308 Unclassified 1791
96 Ga0157380_10145207 3300014326 Bacteria 2044
97 Ga0182008_10007533 3300014497 Bacteria 6002
98 Ga0157376_10127100 3300014969 Unclassified 2269
99 Ga0206353_11077985 3300020082 Bacteria 1537
100 Ga0207692_10108791 3300025898 Bacteria 1534
101 Ga0207692_10141453 3300025898 Bacteria 1369
102 Ga0207710_10068080 3300025900 Unclassified 1627
103 Ga0207699_10112760 3300025906 Bacteria 1745
104 Ga0207699_10269536 3300025906 Bacteria 1179
105 Ga0207645_10022027 3300025907 Unclassified 4150
106 Ga0207643_10058781 3300025908 Unclassified 2192
107 Ga0207654_10111029 3300025911 Bacteria 1706
108 Ga0207707_10049710 3300025912 Bacteria 3653
109 Ga0207707_10076990 3300025912 Bacteria 2911
110 Ga0207707_10104654 3300025912 Bacteria 2473
111 Ga0207671_10123552 3300025914 Bacteria 1980
112 Ga0207693_10000960 3300025915 Bacteria 25860
113 Ga0207693_10069694 3300025915 Bacteria 2751
114 Ga0207663_10047488 3300025916 Bacteria 2651
115 Ga0207663_10155932 3300025916 Bacteria 1606
116 Ga0207660_10080765 3300025917 Bacteria 2388
117 Ga0207652_10016013 3300025921 Bacteria 6113
118 Ga0207652_10299821 3300025921 Bacteria 1450
119 Ga0207659_10035300 3300025926 Unclassified 3455
120 Ga0207687_10169181 3300025927 Unclassified 1684
121 Ga0207700_10023925 3300025928 Bacteria 4221
122 Ga0207700_10031071 3300025928 Bacteria 3790
123 Ga0207664_10006630 3300025929 Bacteria 7974
124 Ga0207664_10029669 3300025929 Bacteria 4168
125 Ga0207690_10085690 3300025932 Bacteria 2212
126 Ga0207690_10108691 3300025932 Bacteria 1993
127 Ga0207706_10061578 3300025933 Bacteria 3305
128 Ga0207706_10445096 3300025933 Unclassified 1121
129 Ga0207686_10119742 3300025934 Unclassified 1790
130 Ga0207709_10065673 3300025935 Unclassified 2283
131 Ga0207704_10144053 3300025938 Unclassified 1671
132 Ga0207691_10235600 3300025940 Unclassified 1584
133 Ga0207689_10017512 3300025942 Bacteria 6060
134 Ga0207658_10085882 3300025986 Unclassified 2425
135 Ga0207703_11002280 3300026035 Bacteria 801
136 Ga0207639_10020706 3300026041 Bacteria 4712
137 Ga0207639_11067486 3300026041 Bacteria 757
138 Ga0207678_10038692 3300026067 Bacteria 4143
139 Ga0207708_10083318 3300026075 Bacteria 2458
140 Ga0207702_10007806 3300026078 Bacteria 9080
141 Ga0207702_10137146 3300026078 Bacteria 2209
142 Ga0207648_10030167 3300026089 Unclassified 4806
143 Ga0207674_10011570 3300026116 Bacteria 9911
144 Ga0207674_10030490 3300026116 Bacteria 5668
145 Ga0207674_10034630 3300026116 Bacteria 5277
146 Ga0268265_10916714 3300028380 Bacteria 861
147 Ga0373944_0021924 3300035089 Unclassified 1853
148 Ga0373936_0183487 3300035113 Unclassified 919
149 Ga0373945_0001950 3300035116 Bacteria 6408
150 Ga0373953_0009184 3300035117 Bacteria 3388
151 Ga0373954_0011851 3300035118 Bacteria 3872
152 Ga0373943_0001686 3300035170 Bacteria 10030
153 Ga0373943_0338336 3300035170 Unclassified 861
154 Ga0373946_0005924 3300035171 Bacteria 4430
155 Ga0373955_0036399 3300035172 Bacteria 2611
156 Ga0373924_0100173 3300035410 Unclassified 1246
157 Ga0373935_0030988 3300035692 Plasmid 3316
158 Ga0373935_0035433 3300035692 Unclassified 3115
159 Ga0373927_0013954 3300035695 Bacteria 5329
160 Ga0373927_0015623 3300035695 Bacteria 5014
161 Ga0373933_0002268 3300035724 Bacteria 10962
162 Ga0373933_0045759 3300035724 Bacteria 2596
163 Ga0373933_0107488 3300035724 Bacteria 1737
164 Ga0373947_0004570 3300035725 Bacteria 8119
165 Ga0373937_0003201 3300036401 Bacteria 13701
166 Ga0373937_0219168 3300036401 Bacteria 1791
167 Ga0316582_0632610 3300036647 Bacteria 736
168 Ga0373925_0001898 3300037068 Bacteria 17358
169 Ga0373925_0165981 3300037068 Bacteria 1741
170 Ga0373925_0211164 3300037068 Bacteria 1546
171 Ga0395899_0000311 3300037312 Bacteria 62323
172 Ga0395899_0044529 3300037312 Bacteria 3307
173 Ga0395899_0093640 3300037312 Bacteria 2174
174 Ga0395900_0000004 3300037418 Bacteria 564908
175 Ga0395900_0622095 3300037418 Bacteria 1018
176 Ga0395898_0011237 3300037466 Bacteria 9317
177 Ga0395898_0030917 3300037466 Bacteria 5356
178 Ga0395898_0188773 3300037466 Bacteria 1969
179 Ga0395905_0016987 3300037471 Bacteria 6909
180 Ga0395901_0000005 3300038443 Bacteria 544998
181 Ga0395901_0029224 3300038443 Bacteria 5673
182 Ga0395901_0068620 3300038443 Bacteria 3693
183 Ga0395901_0514372 3300038443 Bacteria 1217
184 Ga0436365_0411808 3300039437 Bacteria 831
185 Ga0466963_0183207 3300044694 Bacteria 1462
186 Ga0466967_0080553 3300045976 Unclassified 2938
187 Ga0466967_0571768 3300045976 Bacteria 1113
188 Ga0495592_0009630 3300046454 Bacteria 7270
189 Ga0495651_0062719 3300046462 Bacteria 2843
190 Ga0495651_0150572 3300046462 Bacteria 1678
191 Ga0495653_0076262 3300046463 Unclassified 2492
192 Ga0495580_0206031 3300046472 Unclassified 1354
193 Ga0495662_0032928 3300046476 Unclassified 2504
194 Ga0495662_0060847 3300046476 Bacteria 1824
195 Ga0495608_0003679 3300046511 Bacteria 11020
196 Ga0495618_0034911 3300046514 Plasmid 3155
197 Ga0495630_0104259 3300046517 Unclassified 2146
198 Ga0495642_0029497 3300046528 Bacteria 2190
199 Ga0495652_0025580 3300046529 Bacteria 5218
200 Ga0495665_0141075 3300046531 Bacteria 1259
201 Ga0495640_0047100 3300046533 Plasmid 2984
202 Ga0495586_0023455 3300046535 Bacteria 3295
203 Ga0495667_0002510 3300046559 Bacteria 12252
204 Ga0495668_0281617 3300046616 Bacteria 911
205 Ga0495634_0007982 3300046642 Bacteria 7894
206 Ga0495634_0126165 3300046642 Unclassified 1635
207 Ga0495635_0028307 3300046663 Unclassified 3895
208 Ga0495657_0013775 3300046675 Bacteria 5954
209 Ga0495657_0037303 3300046675 Bacteria 3351
210 Ga0495657_0057400 3300046675 Bacteria 2588
211 Ga0495657_0453442 3300046675 Unclassified 751
212 Ga0495623_0006636 3300046679 Bacteria 7533
213 Ga0495623_0287215 3300046679 Bacteria 913
214 Ga0495646_0005480 3300046680 Bacteria 8019
215 Ga0495613_0015891 3300046689 Bacteria 5605
216 Ga0495624_0000746 3300046690 Bacteria 25580
217 Ga0495600_0053628 3300046809 Plasmid 2633
218 Ga0495604_0020357 3300047317 Bacteria 5301
219 Ga0495674_0041049 3300047319 Plasmid 4135
220 Ga0495672_0185812 3300047320 Bacteria 1049
221 Ga0495676_0269892 3300047321 Bacteria 1155
222 Ga0495680_0050050 3300047322 Plasmid 3268
223 Ga0495680_0175047 3300047322 Bacteria 1552
224 Ga0495675_0055842 3300047444 Plasmid 2504
225 Ga0495675_0110613 3300047444 Bacteria 1715
226 Ga0495684_0014981 3300047471 Bacteria 5971
227 Ga0495686_0091922 3300047472 Bacteria 1841
228 Ga0495593_0047795 3300047673 Bacteria 2275
229 Ga0495593_0151652 3300047673 Unclassified 1172
230 Ga0495602_0024350 3300048088 Bacteria 5874
231 Ga0495602_0217868 3300048088 Bacteria 1443
232 Ga0496101_0730698 3300048904 Unclassified 781
233 Ga0496102_0174807 3300048905 Unclassified 2022
234 Ga0496104_0851149 3300048907 Unclassified 817
235 Ga0496107_0038353 3300048910 Bacteria 3438
236 Ga0496107_0605861 3300048910 Bacteria 809
237 Ga0496112_0042653 3300048915 Bacteria 4439
238 Ga0496112_0123610 3300048915 Bacteria 2559
239 Ga0496115_0283105 3300048918 Bacteria 1361
240 Ga0496119_0273921 3300048922 Bacteria 842
241 Ga0496121_0000596 3300048924 Bacteria 67893
242 Ga0496126_0005886 3300048929 Bacteria 13830
243 Ga0501031_0008276 3300049568 Bacteria 6765
244 Ga0501032_0076392 3300049569 Bacteria 2230
245 Ga0501032_0216881 3300049569 Bacteria 1246
246 Ga0501033_0068355 3300049570 Bacteria 2612
247 Ga0501034_0086000 3300049571 Bacteria 3145
248 Ga0501034_0123093 3300049571 Bacteria 2579
249 Ga0501036_0078672 3300049572 Bacteria 2789
250 Ga0501036_0227049 3300049572 Bacteria 1567
251 Ga0501037_0028465 3300049573 Bacteria 4127
252 Ga0501038_0451764 3300049574 Bacteria 988
253 Ga0501040_0287378 3300049576 Bacteria 1175
254 Ga0501043_0057523 3300049579 Bacteria 3053
255 Ga0501043_0284772 3300049579 Bacteria 1266
256 Ga0501046_0282334 3300049580 Bacteria 1216
257 Ga0501047_0193442 3300049581 Bacteria 1897
258 Ga0501048_0217401 3300049582 Bacteria 1355
259 Ga0501070_0263162 3300049586 Unclassified 1409
260 Ga0501070_0448121 3300049586 Bacteria 1041
261 Ga0501072_0329822 3300049588 Bacteria 1212
262 Ga0501073_0061803 3300049589 Bacteria 2613
263 Ga0501073_0324383 3300049589 Bacteria 1063
264 Ga0501080_0358486 3300049742 Bacteria 1316
265 Ga0501080_0660636 3300049742 Bacteria 924
266 Ga0501035_0081092 3300049822 Bacteria 2864
267 Ga0501044_0130578 3300049823 Bacteria 2506
268 Ga0501044_0170472 3300049823 Bacteria 2148
269 nmdc:mga03n38_97858_c1 3300050490 Bacteria 1410
270 nmdc:mga06z11_161296_c1 3300050494 Bacteria 1282
271 nmdc:mga05p37_109319_c1 3300050507 Bacteria 3401
272 nmdc:mga05p37_30859_c1 3300050507 Bacteria 6542
273 nmdc:mga05p37_41656_c1 3300050507 Bacteria 5639
274 nmdc:mga0qj67_89343_c1 3300050509 Bacteria 1049
275 nmdc:mga0n895_55361_c1 3300050512 Plasmid 3904
276 nmdc:mga08x19_584143_c1 3300050514 Bacteria 791
277 nmdc:mga0a205_219305_c1 3300050515 Bacteria 1788
278 Ga0495601_0335345 3300053077 Unclassified 984
279 Ga0495612_0007788 3300053078 Bacteria 4371
280 Ga0495612_0152785 3300053078 Bacteria 1005
281 Ga0495612_0193795 3300053078 Unclassified 895
282 Ga0495595_0004507 3300053084 Bacteria 5604
283 Ga0495595_0014799 3300053084 Bacteria 3317
284 Ga0495595_0134419 3300053084 Bacteria 1211
285 Ga0495619_0013584 3300053085 Bacteria 5131
286 Ga0495619_0013923 3300053085 Bacteria 5076
287 Ga0495619_0185971 3300053085 Bacteria 1437
288 Ga0495619_0367537 3300053085 Unclassified 994
289 Ga0500641_0009558 3300053096 Bacteria 3487
290 Ga0500603_023081 3300053150 Bacteria 1546
291 Ga0500616_0003652 3300053153 Bacteria 11549
292 Ga0500616_0040241 3300053153 Bacteria 2515
293 Ga0500627_0088432 3300053158 Bacteria 1385
294 Ga0501082_0040547 3300060353 Bacteria 4016
295 2753463748 2751185821 Bacteria 6189929
296 2848998442 2848992105 Bacteria 6810864
297 2885312670 2885312484 Bacteria 6415165
298 3005722528 3005718088 Bacteria 8283608
299 Ga0373937_0008623
300 Ga0068869_100025035
301 Ga0070680_100079917
302 Ga0070680_100256718
303 Ga0070680_100321743
304 Ga0070682_100084240
305 Ga0070675_100010247
306 Ga0070671_100285209
307 Ga0070671_100923422
308 Ga0070674_100034222
309 Ga0070673_100102691
310 Ga0070659_100054520
311 Ga0070659_100126679
312 Ga0070667_100284404
313 Ga0070714_100038714
314 Ga0070714_100106478
315 Ga0070714_100115083
316 Ga0070714_100220955
317 Ga0070714_100539353
318 Ga0070713_100042652
319 Ga0070713_100100920
320 Ga0070713_100924919
321 Ga0070710_10076916
322 Ga0070711_100032919
323 Ga0070700_100192935
324 Ga0070694_100470912
325 Ga0070663_100126813
326 Ga0070678_100185122
327 Ga0070662_100439662
328 Ga0070681_10197647
329 Ga0070681_10247681
330 Ga0068867_100011210
331 Ga0070698_100048074
332 Ga0070679_100035713
333 Ga0070679_100041572
334 Ga0070679_100367828
335 Ga0068853_100038344
336 Ga0070672_100224799
337 Ga0070696_100691257
338 Ga0070693_100010628
339 Ga0068855_100263553
340 Ga0068855_100682492
341 Ga0068857_100020105
342 Ga0068857_100065975
343 Ga0068856_100005308
344 Ga0068856_100167480
345 Ga0068866_10248642
346 Ga0068870_10104890
347 Ga0068862_100192436
348 Ga0081455_10231945
349 Ga0070717_10020867
350 Ga0070717_10111163
351 Ga0075363_100122774
352 Ga0075363_100284073
353 Ga0075364_10138389
354 Ga0070715_10056823
355 Ga0070712_100003212
356 Ga0070712_100038512
357 Ga0070712_100096006
358 Ga0070712_100317643
359 Ga0070712_100480071
360 Ga0075367_10019699
361 Ga0097621_100188130
362 Ga0075370_10064472
363 Ga0075428_100407352
364 Ga0075430_100693527
365 Ga0075434_100031117
366 Ga0099795_10007432
367 Ga0099795_10177356
368 Ga0111539_10726289
369 Ga0105245_10034499
370 Ga0105247_10095735
371 Ga0114129_10038116
372 Ga0114129_10038878
373 Ga0114129_10044039
374 Ga0105243_10085371
375 Ga0105241_10025330
376 Ga0105241_10111128
377 Ga0105242_10471836
378 Ga0105248_10218378
379 Ga0105237_10232247
380 Ga0105237_10403849
381 Ga0105237_11211334
382 Ga0105238_10764543
383 Ga0099796_10026480
384 Ga0105239_10083494
385 Ga0105246_10155185
386 Ga0157373_10030423
387 Ga0157370_10078333
388 Ga0157370_10207926
389 Ga0157369_10069692
390 Ga0157369_10213317
391 Ga0157374_10441781
392 Ga0157375_10117246
393 Ga0157375_10292734
394 Ga0157380_10145207
395 Ga0182008_10007533
396 Ga0157376_10127100
397 Ga0206353_11077985
398 Ga0207692_10108791
399 Ga0207692_10141453
400 Ga0207710_10068080
401 Ga0207699_10112760
402 Ga0207699_10269536
403 Ga0207645_10022027
404 Ga0207643_10058781
405 Ga0207654_10111029
406 Ga0207707_10049710
407 Ga0207707_10076990
408 Ga0207707_10104654
409 Ga0207671_10123552
410 Ga0207693_10000960
411 Ga0207693_10069694
412 Ga0207663_10047488
413 Ga0207663_10155932
414 Ga0207660_10080765
415 Ga0207652_10016013
416 Ga0207652_10299821
417 Ga0207659_10035300
418 Ga0207687_10169181
419 Ga0207700_10023925
420 Ga0207700_10031071
421 Ga0207664_10006630
422 Ga0207664_10029669
423 Ga0207690_10085690
424 Ga0207690_10108691
425 Ga0207706_10061578
426 Ga0207706_10445096
427 Ga0207686_10119742
428 Ga0207709_10065673
429 Ga0207704_10144053
430 Ga0207691_10235600
431 Ga0207689_10017512
432 Ga0207658_10085882
433 Ga0207703_11002280
434 Ga0207639_10020706
435 Ga0207639_11067486
436 Ga0207678_10038692
437 Ga0207708_10083318
438 Ga0207702_10007806
439 Ga0207702_10137146
440 Ga0207648_10030167
441 Ga0207674_10011570
442 Ga0207674_10030490
443 Ga0207674_10034630
444 Ga0268265_10916714
445 Ga0373944_0021924
446 Ga0373936_0183487
447 Ga0373945_0001950
448 Ga0373953_0009184
449 Ga0373954_0011851
450 Ga0373943_0001686
451 Ga0373943_0338336
452 Ga0373946_0005924
453 Ga0373955_0036399
454 Ga0373924_0100173
455 Ga0373935_0030988
456 Ga0373935_0035433
457 Ga0373927_0013954
458 Ga0373927_0015623
459 Ga0373933_0002268
460 Ga0373933_0045759
461 Ga0373933_0107488
462 Ga0373947_0004570
463 Ga0373937_0003201
464 Ga0373937_0219168
465 Ga0316582_0632610
466 Ga0373925_0001898
467 Ga0373925_0165981
468 Ga0373925_0211164
469 Ga0395899_0000311
470 Ga0395899_0044529
471 Ga0395899_0093640
472 Ga0395900_0000004
473 Ga0395900_0622095
474 Ga0395898_0011237
475 Ga0395898_0030917
476 Ga0395898_0188773
477 Ga0395905_0016987
478 Ga0395901_0000005
479 Ga0395901_0029224
480 Ga0395901_0068620
481 Ga0395901_0514372
482 Ga0436365_0411808
483 Ga0466963_0183207
484 Ga0466967_0080553
485 Ga0466967_0571768
486 Ga0495592_0009630
487 Ga0495651_0062719
488 Ga0495651_0150572
489 Ga0495653_0076262
490 Ga0495580_0206031
491 Ga0495662_0032928
492 Ga0495662_0060847
493 Ga0495608_0003679
494 Ga0495618_0034911
495 Ga0495630_0104259
496 Ga0495642_0029497
497 Ga0495652_0025580
498 Ga0495665_0141075
499 Ga0495640_0047100
500 Ga0495586_0023455
501 Ga0495667_0002510
502 Ga0495668_0281617
503 Ga0495634_0007982
504 Ga0495634_0126165
505 Ga0495635_0028307
506 Ga0495657_0013775
507 Ga0495657_0037303
508 Ga0495657_0057400
509 Ga0495657_0453442
510 Ga0495623_0006636
511 Ga0495623_0287215
512 Ga0495646_0005480
513 Ga0495613_0015891
514 Ga0495624_0000746
515 Ga0495600_0053628
516 Ga0495604_0020357
517 Ga0495674_0041049
518 Ga0495672_0185812
519 Ga0495676_0269892
520 Ga0495680_0050050
521 Ga0495680_0175047
522 Ga0495675_0055842
523 Ga0495675_0110613
524 Ga0495684_0014981
525 Ga0495686_0091922
526 Ga0495593_0047795
527 Ga0495593_0151652
528 Ga0495602_0024350
529 Ga0495602_0217868
530 Ga0496101_0730698
531 Ga0496102_0174807
532 Ga0496104_0851149
533 Ga0496107_0038353
534 Ga0496107_0605861
535 Ga0496112_0042653
536 Ga0496112_0123610
537 Ga0496115_0283105
538 Ga0496119_0273921
539 Ga0496121_0000596
540 Ga0496126_0005886
541 Ga0501031_0008276
542 Ga0501032_0076392
543 Ga0501032_0216881
544 Ga0501033_0068355
545 Ga0501034_0086000
546 Ga0501034_0123093
547 Ga0501036_0078672
548 Ga0501036_0227049
549 Ga0501037_0028465
550 Ga0501038_0451764
551 Ga0501040_0287378
552 Ga0501043_0057523
553 Ga0501043_0284772
554 Ga0501046_0282334
555 Ga0501047_0193442
556 Ga0501048_0217401
557 Ga0501070_0263162
558 Ga0501070_0448121
559 Ga0501072_0329822
560 Ga0501073_0061803
561 Ga0501073_0324383
562 Ga0501080_0358486
563 Ga0501080_0660636
564 Ga0501035_0081092
565 Ga0501044_0130578
566 Ga0501044_0170472
567 nmdc:mga03n38_97858_c1
568 nmdc:mga06z11_161296_c1
569 nmdc:mga05p37_109319_c1
570 nmdc:mga05p37_30859_c1
571 nmdc:mga05p37_41656_c1
572 nmdc:mga0qj67_89343_c1
573 nmdc:mga0n895_55361_c1
574 nmdc:mga08x19_584143_c1
575 nmdc:mga0a205_219305_c1
576 Ga0495601_0335345
577 Ga0495612_0007788
578 Ga0495612_0152785
579 Ga0495612_0193795
580 Ga0495595_0004507
581 Ga0495595_0014799
582 Ga0495595_0134419
583 Ga0495619_0013584
584 Ga0495619_0013923
585 Ga0495619_0185971
586 Ga0495619_0367537
587 Ga0500641_0009558
588 Ga0500603_023081
589 Ga0500616_0003652
590 Ga0500616_0040241
591 Ga0500627_0088432
592 Ga0501082_0040547
593 2753463748
594 2848998442
595 2885312670
596 3005722528

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01638

HxlR

HxlR-like helix-turn-helix

65

155

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hzt-assembly1.cif.gz_B crystal structure of a putative hth-type transcriptional regulator ytcd 0.9216 37 104
1wq2-assembly1.cif.gz_B neutron crystal structure of dissimilatory sulfite reductase d (dsrd) 0.9024 37 82
4lb5-assembly1.cif.gz_A-2 crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.8875 23 83
7bze-assembly1.cif.gz_A-2 structure of bacillus subtilis hxlr, k13a mutant 0.8742 16 104
5hs7-assembly1.cif.gz_A reduced form of the transcriptional regulator yodb from b. subtilis 0.8629 22 103
ID Description Score Start End Superfamily
af_Q69XJ1_51_114_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9095 27 81 1.10.10.10
af_B4FTK6_47_112_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9021 23 84 1.10.10.10
af_Q58793_245_317_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8913 27 84 1.10.10.10
af_Q58793_322_389_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8891 19 85 1.10.10.10
4lb5A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8875 23 83 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A435TSP8-F1-model_v4 Transcriptional regulator 0.969 39 232 GO:0003677
AF-A0A5R2NDE4-F1-model_v4 Transcriptional regulator 0.964 84 225
AF-A0A2N6D186-F1-model_v4 Transcriptional regulator 0.9615 33 226 GO:0003677
AF-A0A3S0F6E7-F1-model_v4 Transcriptional regulator 0.9592 113 232
AF-A0A435TSP8-F1-model_v4 Transcriptional regulator 0.9592 39 232 GO:0003677

Map