F393724

General Info

Members Datasets Scaffolds Average Seq Length
297 209 594 237

Family's Representative Sequence

Representative Sequence 3300025906|Ga0207699_10033316|Ga0207699_100333163
Length 278
Sequence VSQRRKELSRGPPALLAHVLEFATMRDEITSPDANLDRVRERIERAAARVARSSTDITLIAVSKLHPAGRIRELYEAGVRHFAENRVQEWEAKRAALSDLDATWHLIGHLQSNKAARAIKMFSTIDSLESIALAERLEKAKRDFNTQSTEGAEKSEGEKSVARENRLRVLLEVRLDPAAAKSGVSEDELPGLVEAVPRLPHLELRGLMGVPPYFEDAEKVRPYFRHLRELRDALRLKFGGEILPVLSMGMSHDFEVAIEEGATEIRVGTALFGERRRT

Samples

Sample ID Description Type Environment
1 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
54 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
74 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
120 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
123 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
127 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
128 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
129 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
130 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
132 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
133 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
134 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
135 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
136 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
137 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
138 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
139 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
140 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
141 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
142 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
143 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
144 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
145 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
146 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
147 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
148 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
149 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
150 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
151 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
152 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
153 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
154 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
155 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
156 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
157 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
158 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
159 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
160 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
161 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
162 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
163 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
164 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
165 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
166 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
167 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
168 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
169 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
170 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
171 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
172 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
173 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
174 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
175 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
176 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
177 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
178 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
179 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
180 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
184 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
185 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
186 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
188 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
191 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
192 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
193 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
194 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
195 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
196 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
197 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
198 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
199 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
200 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
201 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
202 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
203 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
204 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
205 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
206 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
207 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
208 2941479691
209 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.98
Metatranscriptomes 0.67
Isolates 1.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.34
Rhizoplane 1.68
Rhizosphere 89.56
Stem 0
Stem Tuber 0
Unclassified 16.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207699_10033316 3300025906 Bacteria 2911
2 Ga0070676_10122754 3300005328 Bacteria 1632
3 Ga0070670_100017339 3300005331 Bacteria 6176
4 Ga0070670_100253488 3300005331 Bacteria 1533
5 Ga0068869_100006646 3300005334 Bacteria 7343
6 Ga0068869_100026787 3300005334 Bacteria 4014
7 Ga0070666_10092471 3300005335 Unclassified 2079
8 Ga0068868_100035138 3300005338 Bacteria 3873
9 Ga0070689_100140244 3300005340 Unclassified 1944
10 Ga0070692_10002892 3300005345 Bacteria 6813
11 Ga0070669_100019398 3300005353 Bacteria 4856
12 Ga0070675_100007657 3300005354 Bacteria 8356
13 Ga0070675_100076334 3300005354 Bacteria 2787
14 Ga0070671_100040229 3300005355 Bacteria 3882
15 Ga0070688_100077588 3300005365 Bacteria 2140
16 Ga0070659_100216719 3300005366 Bacteria 1579
17 Ga0070709_10017112 3300005434 Bacteria 4151
18 Ga0070709_10055157 3300005434 Bacteria 2508
19 Ga0070714_100741424 3300005435 Unclassified 949
20 Ga0070713_100139957 3300005436 Unclassified 2143
21 Ga0070701_10105029 3300005438 Bacteria 1570
22 Ga0070705_100001028 3300005440 Bacteria 15539
23 Ga0070694_100001496 3300005444 Bacteria 13715
24 Ga0070694_100036499 3300005444 Bacteria 3256
25 Ga0070694_100205561 3300005444 Bacteria 1470
26 Ga0070708_100005089 3300005445 Bacteria 10404
27 Ga0070708_100007988 3300005445 Bacteria 8476
28 Ga0070708_100193855 3300005445 Bacteria 1901
29 Ga0070708_100196717 3300005445 Unclassified 1886
30 Ga0070663_100059223 3300005455 Unclassified 2752
31 Ga0070662_100159122 3300005457 Unclassified 1765
32 Ga0068867_100248859 3300005459 Unclassified 1444
33 Ga0070706_100000406 3300005467 Bacteria 51991
34 Ga0070706_100002812 3300005467 Bacteria 17410
35 Ga0070707_100023342 3300005468 Bacteria 5852
36 Ga0070698_100583555 3300005471 Bacteria 1058
37 Ga0070699_100015347 3300005518 Bacteria 6583
38 Ga0070699_100349849 3300005518 Bacteria 1331
39 Ga0070679_100023694 3300005530 Bacteria 6014
40 Ga0070697_100000305 3300005536 Bacteria 39083
41 Ga0070697_100089615 3300005536 Bacteria 2542
42 Ga0070697_100407749 3300005536 Bacteria 1180
43 Ga0068853_100482705 3300005539 Bacteria 1168
44 Ga0070672_100005145 3300005543 Bacteria 8636
45 Ga0070672_100253182 3300005543 Bacteria 1483
46 Ga0070695_100013464 3300005545 Bacteria 4916
47 Ga0070696_100001596 3300005546 Bacteria 14870
48 Ga0070696_100098848 3300005546 Bacteria 2088
49 Ga0070696_100269741 3300005546 Bacteria 1294
50 Ga0070693_100001052 3300005547 Bacteria 12323
51 Ga0070665_100009800 3300005548 Bacteria 9686
52 Ga0070665_100033434 3300005548 Bacteria 5174
53 Ga0070704_100018931 3300005549 Bacteria 4415
54 Ga0070704_100037887 3300005549 Bacteria 3298
55 Ga0070704_100213254 3300005549 Bacteria 1566
56 Ga0070664_100009444 3300005564 Bacteria 7906
57 Ga0070664_100118951 3300005564 Unclassified 2311
58 Ga0068857_100144637 3300005577 Unclassified 2151
59 Ga0068859_100086197 3300005617 Unclassified 3187
60 Ga0068859_100343133 3300005617 Bacteria 1588
61 Ga0068864_100040347 3300005618 Bacteria 3993
62 Ga0068864_100114149 3300005618 Unclassified 2408
63 Ga0068861_100029175 3300005719 Bacteria 4033
64 Ga0068861_100066670 3300005719 Bacteria 2775
65 Ga0068863_100031062 3300005841 Bacteria 5100
66 Ga0068863_100161977 3300005841 Bacteria 2143
67 Ga0068863_100166260 3300005841 Unclassified 2115
68 Ga0068863_100564223 3300005841 Bacteria 1125
69 Ga0068858_100704401 3300005842 Bacteria 983
70 Ga0068860_100033864 3300005843 Bacteria 4901
71 Ga0068860_100060057 3300005843 Unclassified 3614
72 Ga0068862_100612718 3300005844 Bacteria 1046
73 Ga0081455_10023262 3300005937 Bacteria 5770
74 Ga0070717_10135870 3300006028 Unclassified 2117
75 Ga0097621_100068385 3300006237 Bacteria 2929
76 Ga0075434_100039646 3300006871 Bacteria 4667
77 Ga0097620_100086193 3300006931 Unclassified 3187
78 Ga0097620_100343104 3300006931 Bacteria 1588
79 Ga0099826_10211404 3300006948 Bacteria 1053
80 Ga0075435_100292164 3300007076 Bacteria 1393
81 Ga0099794_10023765 3300007265 Bacteria 2807
82 Ga0099795_10061325 3300007788 Unclassified 1396
83 Ga0105240_10017009 3300009093 Bacteria 9825
84 Ga0105240_10596028 3300009093 Bacteria 1217
85 Ga0111539_10096191 3300009094 Unclassified 3478
86 Ga0105247_10029136 3300009101 Unclassified 3343
87 Ga0114129_10038423 3300009147 Bacteria 6752
88 Ga0105248_10893143 3300009177 Unclassified 1003
89 Ga0105237_10062296 3300009545 Bacteria 3730
90 Ga0105237_10222096 3300009545 Unclassified 1889
91 Ga0105249_10005108 3300009553 Bacteria 11314
92 Ga0105249_10317886 3300009553 Bacteria 1567
93 Ga0099796_10005480 3300010159 Unclassified 3172
94 Ga0099796_10122460 3300010159 Bacteria 1001
95 Ga0157373_10051393 3300013100 Bacteria 2936
96 Ga0157371_10259739 3300013102 Bacteria 1252
97 Ga0157378_10030178 3300013297 Bacteria 4790
98 Ga0157378_10055499 3300013297 Bacteria 3529
99 Ga0163162_10043183 3300013306 Bacteria 4514
100 Ga0163162_10142087 3300013306 Unclassified 2514
101 Ga0157372_10018144 3300013307 Bacteria 7565
102 Ga0157375_10023160 3300013308 Bacteria 5726
103 Ga0163163_10061771 3300014325 Unclassified 3712
104 Ga0163163_10102671 3300014325 Bacteria 2883
105 Ga0163163_10456057 3300014325 Bacteria 1339
106 Ga0157380_10017889 3300014326 Bacteria 5255
107 Ga0157379_10014821 3300014968 Bacteria 6836
108 Ga0157376_10000160 3300014969 Bacteria 46966
109 Ga0157376_10138756 3300014969 Bacteria 2179
110 Ga0228598_1000271 3300024227 Bacteria 9973
111 Ga0207697_10003339 3300025315 Bacteria 7980
112 Ga0207682_10017299 3300025893 Unclassified 2816
113 Ga0207710_10219425 3300025900 Unclassified 944
114 Ga0207688_10037566 3300025901 Unclassified 2687
115 Ga0207699_10019026 3300025906 Bacteria 3652
116 Ga0207699_10024352 3300025906 Bacteria 3309
117 Ga0207699_10072371 3300025906 Bacteria 2111
118 Ga0207699_10162206 3300025906 Bacteria 1489
119 Ga0207699_10576537 3300025906 Bacteria 818
120 Ga0207645_10005749 3300025907 Bacteria 8949
121 Ga0207643_10044920 3300025908 Unclassified 2494
122 Ga0207684_10004628 3300025910 Bacteria 12915
123 Ga0207684_10005423 3300025910 Bacteria 11766
124 Ga0207695_10479594 3300025913 Bacteria 1126
125 Ga0207671_10030949 3300025914 Bacteria 3990
126 Ga0207671_10389706 3300025914 Bacteria 1107
127 Ga0207693_10408632 3300025915 Unclassified 1061
128 Ga0207660_10449104 3300025917 Bacteria 1042
129 Ga0207657_10119522 3300025919 Unclassified 2169
130 Ga0207649_10087562 3300025920 Bacteria 2032
131 Ga0207652_10223199 3300025921 Bacteria 1698
132 Ga0207646_10032322 3300025922 Bacteria 4736
133 Ga0207681_10067341 3300025923 Unclassified 2482
134 Ga0207650_10021800 3300025925 Bacteria 4530
135 Ga0207650_10197607 3300025925 Unclassified 1609
136 Ga0207664_10686837 3300025929 Unclassified 920
137 Ga0207690_10265906 3300025932 Bacteria 1330
138 Ga0207706_10010164 3300025933 Bacteria 8614
139 Ga0207706_10019064 3300025933 Bacteria 6171
140 Ga0207670_10073622 3300025936 Unclassified 2369
141 Ga0207665_10000089 3300025939 Bacteria 59318
142 Ga0207691_10001356 3300025940 Bacteria 24406
143 Ga0207691_10041531 3300025940 Bacteria 4245
144 Ga0207711_10419561 3300025941 Bacteria 1244
145 Ga0207689_10008329 3300025942 Bacteria 9032
146 Ga0207689_10014116 3300025942 Bacteria 6799
147 Ga0207689_10231037 3300025942 Bacteria 1529
148 Ga0207712_10114322 3300025961 Unclassified 2030
149 Ga0207668_10020562 3300025972 Unclassified 4196
150 Ga0207668_10459033 3300025972 Bacteria 1089
151 Ga0207640_10133915 3300025981 Unclassified 1796
152 Ga0207677_10066876 3300026023 Bacteria 2515
153 Ga0207677_10400721 3300026023 Bacteria 1164
154 Ga0207639_10578052 3300026041 Unclassified 1034
155 Ga0207678_10011158 3300026067 Bacteria 7891
156 Ga0207678_10058349 3300026067 Bacteria 3321
157 Ga0207708_10057472 3300026075 Bacteria 2968
158 Ga0207641_10113869 3300026088 Bacteria 2402
159 Ga0207641_10519237 3300026088 Bacteria 1158
160 Ga0207648_10051605 3300026089 Bacteria 3595
161 Ga0207676_10031494 3300026095 Unclassified 3990
162 Ga0207676_10126753 3300026095 Bacteria 2163
163 Ga0207676_10917125 3300026095 Unclassified 860
164 Ga0207674_10112552 3300026116 Bacteria 2695
165 Ga0207675_100011748 3300026118 Bacteria 8185
166 Ga0207675_100028918 3300026118 Bacteria 5164
167 Ga0207683_10017362 3300026121 Bacteria 6132
168 Ga0207683_10033508 3300026121 Bacteria 4461
169 Ga0209371_1013201 3300027312 Bacteria 2337
170 Ga0209967_1005558 3300027364 Bacteria 1696
171 Ga0209995_1007207 3300027471 Bacteria 1793
172 Ga0209970_1002952 3300027614 Bacteria 2868
173 Ga0209983_1000003 3300027665 Bacteria 27434
174 Ga0209588_1029091 3300027671 Bacteria 1761
175 Ga0209971_1000405 3300027682 Bacteria 11690
176 Ga0209966_1002451 3300027695 Bacteria 3099
177 Ga0209998_10002208 3300027717 Bacteria 4513
178 Ga0209974_10000902 3300027876 Bacteria 10343
179 Ga0265354_1000411 3300028016 Bacteria 7549
180 Ga0268266_10291430 3300028379 Bacteria 1520
181 Ga0268265_10050477 3300028380 Bacteria 3134
182 Ga0268264_10050658 3300028381 Unclassified 3458
183 Ga0265319_1001935 3300028563 Bacteria 11733
184 Ga0265318_10000470 3300028577 Bacteria 29937
185 Ga0265338_10232728 3300028800 Bacteria 1369
186 Ga0265338_10574129 3300028800 Bacteria 787
187 Ga0268256_1014483 3300030500 Bacteria 2337
188 Ga0265765_1004965 3300030879 Unclassified 1382
189 Ga0265760_10000016 3300031090 Bacteria 89697
190 Ga0265328_10050041 3300031239 Unclassified 1534
191 Ga0265320_10000458 3300031240 Bacteria 32020
192 Ga0265325_10041849 3300031241 Bacteria 2399
193 Ga0265329_10000608 3300031242 Bacteria 18454
194 Ga0265329_10035244 3300031242 Bacteria 1615
195 Ga0265329_10039229 3300031242 Bacteria 1523
196 Ga0265340_10077815 3300031247 Bacteria 1564
197 Ga0265339_10015031 3300031249 Bacteria 4652
198 Ga0265331_10000626 3300031250 Bacteria 30727
199 Ga0265331_10015208 3300031250 Bacteria 4071
200 Ga0265316_10006292 3300031344 Bacteria 11368
201 Ga0265313_10007574 3300031595 Bacteria 7380
202 Ga0265313_10031671 3300031595 Bacteria 2708
203 Ga0265314_10026888 3300031711 Bacteria 4317
204 Ga0265342_10004629 3300031712 Bacteria 10723
205 Ga0373954_0052640 3300035118 Bacteria 1913
206 Ga0373955_0055168 3300035172 Bacteria 2175
207 Ga0373937_0003192 3300036401 Bacteria 13728
208 Ga0373937_0047470 3300036401 Archaea 3929
209 Ga0373937_0306848 3300036401 Bacteria 1501
210 Ga0373937_0464591 3300036401 Bacteria 1202
211 Ga0316582_0213877 3300036647 Bacteria 1317
212 Ga0453683_0005916 3300044673 Bacteria 8446
213 Ga0453684_0000141 3300044712 Bacteria 316572
214 Ga0453684_0287457 3300044712 Unclassified 1873
215 Ga0451576_0062543 3300045051 Bacteria 3880
216 Ga0495603_0016253 3300046455 Bacteria 4503
217 Ga0495629_0011234 3300046459 Bacteria 6503
218 Ga0495629_0164979 3300046459 Bacteria 1538
219 Ga0495580_0333779 3300046472 Bacteria 1029
220 Ga0495580_0353244 3300046472 Bacteria 995
221 Ga0495582_0027967 3300046473 Bacteria 3093
222 Ga0495582_0365639 3300046473 Bacteria 831
223 Ga0495594_0068162 3300046499 Bacteria 1976
224 Ga0495628_0026495 3300046516 Bacteria 4726
225 Ga0495628_0050164 3300046516 Bacteria 3302
226 Ga0495630_0023119 3300046517 Bacteria 4593
227 Ga0495640_0044937 3300046533 Unclassified 3067
228 Ga0495640_0140755 3300046533 Bacteria 1555
229 Ga0495587_0195582 3300046536 Bacteria 1144
230 Ga0495645_0019680 3300046543 Bacteria 4863
231 Ga0495635_0112768 3300046663 Bacteria 1857
232 Ga0495657_0007474 3300046675 Bacteria 8444
233 Ga0495657_0066397 3300046675 Bacteria 2370
234 Ga0495599_0228345 3300046678 Bacteria 1137
235 Ga0495647_0100016 3300046681 Bacteria 1200
236 Ga0495658_0048417 3300046683 Bacteria 2396
237 Ga0495658_0229997 3300046683 Bacteria 1163
238 Ga0495613_0043014 3300046689 Unclassified 3342
239 Ga0495604_0177266 3300047317 Bacteria 1493
240 Ga0495674_0123705 3300047319 Bacteria 2184
241 Ga0495675_0062555 3300047444 Bacteria 2356
242 Ga0495684_0075052 3300047471 Bacteria 2569
243 Ga0495602_0028626 3300048088 Bacteria 5327
244 Ga0496103_0039058 3300048906 Unclassified 2916
245 Ga0496104_0077288 3300048907 Bacteria 3172
246 Ga0496105_0102407 3300048908 Bacteria 2364
247 Ga0496106_0054145 3300048909 Bacteria 3031
248 Ga0496110_0031030 3300048913 Bacteria 4610
249 Ga0496116_0006834 3300048919 Bacteria 10256
250 Ga0496116_0102289 3300048919 Bacteria 1708
251 Ga0496116_0115023 3300048919 Bacteria 1570
252 Ga0496117_0051622 3300048920 Bacteria 2905
253 Ga0496117_0058463 3300048920 Bacteria 2670
254 Ga0496118_0002848 3300048921 Bacteria 22568
255 Ga0496118_0012142 3300048921 Bacteria 8311
256 Ga0496120_0002648 3300048923 Bacteria 17676
257 Ga0496121_0000195 3300048924 Bacteria 136162
258 Ga0496121_0050772 3300048924 Bacteria 3500
259 Ga0496122_0000498 3300048925 Bacteria 81668
260 Ga0496122_0046543 3300048925 Bacteria 3358
261 Ga0496123_0000390 3300048926 Bacteria 82150
262 Ga0496123_0009300 3300048926 Bacteria 8868
263 Ga0496124_0000007 3300048927 Bacteria 883534
264 Ga0496124_0051629 3300048927 Bacteria 3497
265 Ga0496124_0148942 3300048927 Bacteria 1838
266 Ga0496125_0000364 3300048928 Bacteria 85440
267 Ga0496125_0012281 3300048928 Bacteria 8513
268 Ga0496125_0057822 3300048928 Bacteria 3137
269 Ga0496126_0016001 3300048929 Bacteria 7520
270 Ga0496126_0125537 3300048929 Bacteria 2221
271 Ga0501036_0369767 3300049572 Bacteria 1197
272 Ga0501039_0080318 3300049575 Bacteria 2538
273 Ga0501040_0108792 3300049576 Bacteria 1938
274 Ga0501042_0108684 3300049578 Bacteria 1997
275 Ga0501067_0270548 3300049583 Unclassified 946
276 Ga0501072_0238016 3300049588 Bacteria 1450
277 Ga0501074_0224448 3300049590 Bacteria 1337
278 Ga0501075_0039273 3300049591 Bacteria 3543
279 Ga0501076_0076009 3300049592 Bacteria 2693
280 Ga0501080_0204571 3300049742 Bacteria 1811
281 Ga0501080_0515397 3300049742 Bacteria 1067
282 Ga0501081_0233475 3300049743 Bacteria 1340
283 Ga0501045_0152446 3300049824 Bacteria 1719
284 nmdc:mga05p37_19487_c1 3300050507 Bacteria 8205
285 nmdc:mga08y16_208140_c1 3300050511 Unclassified 2026
286 nmdc:mga0n895_18411_c1 3300050512 Bacteria 6462
287 nmdc:mga0n895_471218_c1 3300050512 Unclassified 1267
288 Ga0495601_0014102 3300053077 Bacteria 4815
289 Ga0495601_0186899 3300053077 Bacteria 1354
290 Ga0495612_0054176 3300053078 Bacteria 1652
291 Ga0495595_0012395 3300053084 Bacteria 3583
292 Ga0495619_0007105 3300053085 Bacteria 7088
293 Ga0501084_0073179 3300054114 Bacteria 2870
294 2857537876 2857537821 Bacteria 5248181
295 2857544371 2857542790 Bacteria 5326616
296 2941484102
297 8055228542 8055225921 Bacteria 3341787
298 Ga0207699_10033316
299 Ga0070676_10122754
300 Ga0070670_100017339
301 Ga0070670_100253488
302 Ga0068869_100006646
303 Ga0068869_100026787
304 Ga0070666_10092471
305 Ga0068868_100035138
306 Ga0070689_100140244
307 Ga0070692_10002892
308 Ga0070669_100019398
309 Ga0070675_100007657
310 Ga0070675_100076334
311 Ga0070671_100040229
312 Ga0070688_100077588
313 Ga0070659_100216719
314 Ga0070709_10017112
315 Ga0070709_10055157
316 Ga0070714_100741424
317 Ga0070713_100139957
318 Ga0070701_10105029
319 Ga0070705_100001028
320 Ga0070694_100001496
321 Ga0070694_100036499
322 Ga0070694_100205561
323 Ga0070708_100005089
324 Ga0070708_100007988
325 Ga0070708_100193855
326 Ga0070708_100196717
327 Ga0070663_100059223
328 Ga0070662_100159122
329 Ga0068867_100248859
330 Ga0070706_100000406
331 Ga0070706_100002812
332 Ga0070707_100023342
333 Ga0070698_100583555
334 Ga0070699_100015347
335 Ga0070699_100349849
336 Ga0070679_100023694
337 Ga0070697_100000305
338 Ga0070697_100089615
339 Ga0070697_100407749
340 Ga0068853_100482705
341 Ga0070672_100005145
342 Ga0070672_100253182
343 Ga0070695_100013464
344 Ga0070696_100001596
345 Ga0070696_100098848
346 Ga0070696_100269741
347 Ga0070693_100001052
348 Ga0070665_100009800
349 Ga0070665_100033434
350 Ga0070704_100018931
351 Ga0070704_100037887
352 Ga0070704_100213254
353 Ga0070664_100009444
354 Ga0070664_100118951
355 Ga0068857_100144637
356 Ga0068859_100086197
357 Ga0068859_100343133
358 Ga0068864_100040347
359 Ga0068864_100114149
360 Ga0068861_100029175
361 Ga0068861_100066670
362 Ga0068863_100031062
363 Ga0068863_100161977
364 Ga0068863_100166260
365 Ga0068863_100564223
366 Ga0068858_100704401
367 Ga0068860_100033864
368 Ga0068860_100060057
369 Ga0068862_100612718
370 Ga0081455_10023262
371 Ga0070717_10135870
372 Ga0097621_100068385
373 Ga0075434_100039646
374 Ga0097620_100086193
375 Ga0097620_100343104
376 Ga0099826_10211404
377 Ga0075435_100292164
378 Ga0099794_10023765
379 Ga0099795_10061325
380 Ga0105240_10017009
381 Ga0105240_10596028
382 Ga0111539_10096191
383 Ga0105247_10029136
384 Ga0114129_10038423
385 Ga0105248_10893143
386 Ga0105237_10062296
387 Ga0105237_10222096
388 Ga0105249_10005108
389 Ga0105249_10317886
390 Ga0099796_10005480
391 Ga0099796_10122460
392 Ga0157373_10051393
393 Ga0157371_10259739
394 Ga0157378_10030178
395 Ga0157378_10055499
396 Ga0163162_10043183
397 Ga0163162_10142087
398 Ga0157372_10018144
399 Ga0157375_10023160
400 Ga0163163_10061771
401 Ga0163163_10102671
402 Ga0163163_10456057
403 Ga0157380_10017889
404 Ga0157379_10014821
405 Ga0157376_10000160
406 Ga0157376_10138756
407 Ga0228598_1000271
408 Ga0207697_10003339
409 Ga0207682_10017299
410 Ga0207710_10219425
411 Ga0207688_10037566
412 Ga0207699_10019026
413 Ga0207699_10024352
414 Ga0207699_10072371
415 Ga0207699_10162206
416 Ga0207699_10576537
417 Ga0207645_10005749
418 Ga0207643_10044920
419 Ga0207684_10004628
420 Ga0207684_10005423
421 Ga0207695_10479594
422 Ga0207671_10030949
423 Ga0207671_10389706
424 Ga0207693_10408632
425 Ga0207660_10449104
426 Ga0207657_10119522
427 Ga0207649_10087562
428 Ga0207652_10223199
429 Ga0207646_10032322
430 Ga0207681_10067341
431 Ga0207650_10021800
432 Ga0207650_10197607
433 Ga0207664_10686837
434 Ga0207690_10265906
435 Ga0207706_10010164
436 Ga0207706_10019064
437 Ga0207670_10073622
438 Ga0207665_10000089
439 Ga0207691_10001356
440 Ga0207691_10041531
441 Ga0207711_10419561
442 Ga0207689_10008329
443 Ga0207689_10014116
444 Ga0207689_10231037
445 Ga0207712_10114322
446 Ga0207668_10020562
447 Ga0207668_10459033
448 Ga0207640_10133915
449 Ga0207677_10066876
450 Ga0207677_10400721
451 Ga0207639_10578052
452 Ga0207678_10011158
453 Ga0207678_10058349
454 Ga0207708_10057472
455 Ga0207641_10113869
456 Ga0207641_10519237
457 Ga0207648_10051605
458 Ga0207676_10031494
459 Ga0207676_10126753
460 Ga0207676_10917125
461 Ga0207674_10112552
462 Ga0207675_100011748
463 Ga0207675_100028918
464 Ga0207683_10017362
465 Ga0207683_10033508
466 Ga0209371_1013201
467 Ga0209967_1005558
468 Ga0209995_1007207
469 Ga0209970_1002952
470 Ga0209983_1000003
471 Ga0209588_1029091
472 Ga0209971_1000405
473 Ga0209966_1002451
474 Ga0209998_10002208
475 Ga0209974_10000902
476 Ga0265354_1000411
477 Ga0268266_10291430
478 Ga0268265_10050477
479 Ga0268264_10050658
480 Ga0265319_1001935
481 Ga0265318_10000470
482 Ga0265338_10232728
483 Ga0265338_10574129
484 Ga0268256_1014483
485 Ga0265765_1004965
486 Ga0265760_10000016
487 Ga0265328_10050041
488 Ga0265320_10000458
489 Ga0265325_10041849
490 Ga0265329_10000608
491 Ga0265329_10035244
492 Ga0265329_10039229
493 Ga0265340_10077815
494 Ga0265339_10015031
495 Ga0265331_10000626
496 Ga0265331_10015208
497 Ga0265316_10006292
498 Ga0265313_10007574
499 Ga0265313_10031671
500 Ga0265314_10026888
501 Ga0265342_10004629
502 Ga0373954_0052640
503 Ga0373955_0055168
504 Ga0373937_0003192
505 Ga0373937_0047470
506 Ga0373937_0306848
507 Ga0373937_0464591
508 Ga0316582_0213877
509 Ga0453683_0005916
510 Ga0453684_0000141
511 Ga0453684_0287457
512 Ga0451576_0062543
513 Ga0495603_0016253
514 Ga0495629_0011234
515 Ga0495629_0164979
516 Ga0495580_0333779
517 Ga0495580_0353244
518 Ga0495582_0027967
519 Ga0495582_0365639
520 Ga0495594_0068162
521 Ga0495628_0026495
522 Ga0495628_0050164
523 Ga0495630_0023119
524 Ga0495640_0044937
525 Ga0495640_0140755
526 Ga0495587_0195582
527 Ga0495645_0019680
528 Ga0495635_0112768
529 Ga0495657_0007474
530 Ga0495657_0066397
531 Ga0495599_0228345
532 Ga0495647_0100016
533 Ga0495658_0048417
534 Ga0495658_0229997
535 Ga0495613_0043014
536 Ga0495604_0177266
537 Ga0495674_0123705
538 Ga0495675_0062555
539 Ga0495684_0075052
540 Ga0495602_0028626
541 Ga0496103_0039058
542 Ga0496104_0077288
543 Ga0496105_0102407
544 Ga0496106_0054145
545 Ga0496110_0031030
546 Ga0496116_0006834
547 Ga0496116_0102289
548 Ga0496116_0115023
549 Ga0496117_0051622
550 Ga0496117_0058463
551 Ga0496118_0002848
552 Ga0496118_0012142
553 Ga0496120_0002648
554 Ga0496121_0000195
555 Ga0496121_0050772
556 Ga0496122_0000498
557 Ga0496122_0046543
558 Ga0496123_0000390
559 Ga0496123_0009300
560 Ga0496124_0000007
561 Ga0496124_0051629
562 Ga0496124_0148942
563 Ga0496125_0000364
564 Ga0496125_0012281
565 Ga0496125_0057822
566 Ga0496126_0016001
567 Ga0496126_0125537
568 Ga0501036_0369767
569 Ga0501039_0080318
570 Ga0501040_0108792
571 Ga0501042_0108684
572 Ga0501067_0270548
573 Ga0501072_0238016
574 Ga0501074_0224448
575 Ga0501075_0039273
576 Ga0501076_0076009
577 Ga0501080_0204571
578 Ga0501080_0515397
579 Ga0501081_0233475
580 Ga0501045_0152446
581 nmdc:mga05p37_19487_c1
582 nmdc:mga08y16_208140_c1
583 nmdc:mga0n895_18411_c1
584 nmdc:mga0n895_471218_c1
585 Ga0495601_0014102
586 Ga0495601_0186899
587 Ga0495612_0054176
588 Ga0495595_0012395
589 Ga0495619_0007105
590 Ga0501084_0073179
591 2857537876
592 2857544371
593 2941484102
594 8055228542

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01168

Ala_racemase_N

Alanine racemase, N-terminal domain

34

276

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7f8e-assembly3.cif.gz_C crystal structure of yggs from fusobacterium nucleatum 0.9498 7 230
7ygf-assembly3.cif.gz_C crystal structure of yggs from fusobacterium nucleatum 0.9493 7 230
3r79-assembly3.cif.gz_B crystal structure of an uncharactertized protein from agrobacterium tumefaciens 0.9416 8 233
3r79-assembly3.cif.gz_A-2 crystal structure of an uncharactertized protein from agrobacterium tumefaciens 0.941 7 233
3sy1-assembly1.cif.gz_A crystal structure of engineered protein. northeast structural genomics consortium target or70 0.94 7 232
ID Description Score Start End Superfamily
af_Q9Z2Y8_11_258_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.939 8 235 3.20.20.10
3r79B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9389 8 233 3.20.20.10
1w8gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9362 8 232 3.20.20.10
1w8gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9283 8 232 3.20.20.10
af_Q9P6Q1_1_232_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9127 7 236 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A7V0TYI0-F1-model_v4 YggS family pyridoxal phosphate-dependent enzyme 0.991 84 230 GO:0030170
AF-A0A7C5X3F0-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9858 8 231 GO:0030170
AF-A0A7C7UVC6-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9839 33 233 GO:0030170
AF-A0A366H6B1-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9825 7 233 GO:0030170
AF-A0A7V0T4I7-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9817 7 233 GO:0030170

Map