F393603

General Info

Members Datasets Scaffolds Average Seq Length
297 194 594 225

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100078865|Ga0070679_1000788652
Length 258
Sequence VAYWAALERIDSVREDRRQETGDRREKTEGGVRISEIFYSLQGEGVLVGVPSAFVRTSGCNLRCVWCDTPYTSWSPEGEDRSIEDVIGEVKALDAGYVVVTGGEPMIAPEIVKLTTALREAGLHITVETAGTVYQPVACDLMSISPKLSNSIPHERDGGRWAAQHDRLRYQPEILRRLLRDYSHQLKFVVSEPEDLQEIAALREELAVCRERIILMPEGTRRDVLRERGLWLAEICKREGYRFSPRLHVELWGDRRGV

Samples

Sample ID Description Type Environment
1 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
46 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
67 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
80 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
81 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
82 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
121 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
122 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
123 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
124 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
125 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
126 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
127 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
128 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
129 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
130 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
131 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
132 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
133 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
134 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
135 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
136 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
137 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
138 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
139 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
140 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
141 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
142 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
143 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
144 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
145 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
146 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
147 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
148 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
149 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
150 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
151 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
152 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
153 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
154 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
155 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
156 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
157 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
158 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
159 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
160 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
161 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
162 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
174 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
175 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
176 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
177 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
180 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
185 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
188 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
189 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
190 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
191 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
194 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 99.66
Metatranscriptomes 0
Isolates 0.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.34
Nodule 0
Rhizoplane 3.37
Rhizosphere 94.28
Stem 0
Stem Tuber 0
Unclassified 17.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070679_100078865 3300005530 Bacteria 3282
2 Ga0065704_10113173 3300005289 Bacteria 1918
3 Ga0065712_10000197 3300005290 Bacteria 21056
4 Ga0065712_10068910 3300005290 Bacteria 8569
5 Ga0065715_10090390 3300005293 Bacteria 7105
6 Ga0070683_100049681 3300005329 Bacteria 3880
7 Ga0070690_100058648 3300005330 Bacteria 2473
8 Ga0070670_100001502 3300005331 Bacteria 18780
9 Ga0068869_100339976 3300005334 Unclassified 1221
10 Ga0070680_100004256 3300005336 Bacteria 10748
11 Ga0070680_100024479 3300005336 Bacteria 4824
12 Ga0070680_100086637 3300005336 Bacteria 2589
13 Ga0070680_100397377 3300005336 Bacteria 1175
14 Ga0068868_100106781 3300005338 Unclassified 2271
15 Ga0070689_100373932 3300005340 Unclassified 1200
16 Ga0070691_10109731 3300005341 Bacteria 1379
17 Ga0070687_100018060 3300005343 Bacteria 3254
18 Ga0070661_100034652 3300005344 Bacteria 3662
19 Ga0070692_10210746 3300005345 Bacteria 1143
20 Ga0070668_100086310 3300005347 Bacteria 2468
21 Ga0070668_100375058 3300005347 Unclassified 1209
22 Ga0070669_100397823 3300005353 Bacteria 1126
23 Ga0070675_100819228 3300005354 Bacteria 851
24 Ga0070671_100334497 3300005355 Bacteria 1291
25 Ga0070673_100159696 3300005364 Unclassified 1916
26 Ga0070673_100433997 3300005364 Bacteria 1179
27 Ga0070688_100130570 3300005365 Bacteria 1694
28 Ga0070667_100210085 3300005367 Bacteria 1730
29 Ga0070667_100266137 3300005367 Unclassified 1536
30 Ga0070713_100240147 3300005436 Bacteria 1649
31 Ga0070694_100057395 3300005444 Bacteria 2646
32 Ga0070663_100011933 3300005455 Bacteria 5480
33 Ga0070681_10001865 3300005458 Bacteria 19027
34 Ga0070681_10199159 3300005458 Bacteria 1921
35 Ga0070706_100046788 3300005467 Bacteria 3994
36 Ga0070699_100096227 3300005518 Bacteria 2593
37 Ga0070679_100022334 3300005530 Bacteria 6185
38 Ga0070679_100033615 3300005530 Bacteria 5078
39 Ga0070679_100308404 3300005530 Bacteria 1533
40 Ga0070684_100239086 3300005535 Bacteria 1659
41 Ga0070684_100687959 3300005535 Unclassified 953
42 Ga0070697_100033572 3300005536 Bacteria 4133
43 Ga0068853_100273507 3300005539 Unclassified 1556
44 Ga0070672_100422381 3300005543 Bacteria 1145
45 Ga0070672_100520184 3300005543 Unclassified 1031
46 Ga0070672_100687099 3300005543 Unclassified 896
47 Ga0070686_100253231 3300005544 Bacteria 1287
48 Ga0070695_100288262 3300005545 Bacteria 1209
49 Ga0070696_100328315 3300005546 Bacteria 1179
50 Ga0070696_100354763 3300005546 Bacteria 1137
51 Ga0070665_100052934 3300005548 Bacteria 4072
52 Ga0070665_100103440 3300005548 Bacteria 2851
53 Ga0070665_100108933 3300005548 Bacteria 2772
54 Ga0070664_100007514 3300005564 Bacteria 8797
55 Ga0070664_100144004 3300005564 Bacteria 2100
56 Ga0068854_100038995 3300005578 Bacteria 3344
57 Ga0068856_100508605 3300005614 Bacteria 1226
58 Ga0070702_100190046 3300005615 Bacteria 1351
59 Ga0068864_100451648 3300005618 Unclassified 1229
60 Ga0068864_100804309 3300005618 Bacteria 924
61 Ga0068861_100367476 3300005719 Bacteria 1267
62 Ga0068861_100761081 3300005719 Unclassified 905
63 Ga0068858_100118201 3300005842 Bacteria 2478
64 Ga0068860_100422991 3300005843 Bacteria 1321
65 Ga0081538_10002212 3300005981 Bacteria 19279
66 Ga0081538_10069432 3300005981 Bacteria 1952
67 Ga0081540_1159545 3300005983 Unclassified 877
68 Ga0081539_10023516 3300005985 Bacteria 4035
69 Ga0070717_10599355 3300006028 Unclassified 999
70 Ga0097621_100948636 3300006237 Bacteria 803
71 Ga0075428_100025583 3300006844 Bacteria 6535
72 Ga0075430_100057969 3300006846 Bacteria 3256
73 Ga0075430_100264503 3300006846 Bacteria 1424
74 Ga0075431_100008094 3300006847 Bacteria 10495
75 Ga0075431_100087419 3300006847 Bacteria 3216
76 Ga0075431_100198140 3300006847 Bacteria 2056
77 Ga0075433_10115923 3300006852 Bacteria 2377
78 Ga0075434_100001013 3300006871 Bacteria 22840
79 Ga0075434_100034717 3300006871 Bacteria 4982
80 Ga0068865_100400103 3300006881 Bacteria 1125
81 Ga0075435_100002540 3300007076 Bacteria 12145
82 Ga0075435_100710656 3300007076 Bacteria 874
83 Ga0105240_10931724 3300009093 Unclassified 933
84 Ga0111539_10348824 3300009094 Unclassified 1723
85 Ga0111539_10661529 3300009094 Bacteria 1216
86 Ga0105245_10150152 3300009098 Bacteria 2202
87 Ga0105245_10522248 3300009098 Bacteria 1206
88 Ga0105245_10708860 3300009098 Unclassified 1040
89 Ga0114129_10016537 3300009147 Bacteria 10503
90 Ga0105243_10140036 3300009148 Bacteria 2063
91 Ga0105242_10494858 3300009176 Bacteria 1162
92 Ga0105242_11096282 3300009176 Bacteria 810
93 Ga0105248_10080555 3300009177 Bacteria 3660
94 Ga0105248_10210622 3300009177 Bacteria 2190
95 Ga0105248_10330389 3300009177 Bacteria 1717
96 Ga0105248_10355059 3300009177 Bacteria 1650
97 Ga0105248_10788768 3300009177 Bacteria 1072
98 Ga0105237_10002749 3300009545 Bacteria 21438
99 Ga0105237_10068126 3300009545 Bacteria 3553
100 Ga0105239_10034556 3300010375 Bacteria 5552
101 Ga0105239_10628718 3300010375 Bacteria 1225
102 Ga0105239_10811008 3300010375 Unclassified 1072
103 Ga0105246_10132474 3300011119 Bacteria 1864
104 Ga0157373_10081607 3300013100 Bacteria 2280
105 Ga0157370_10016449 3300013104 Bacteria 7488
106 Ga0157370_10217939 3300013104 Unclassified 1768
107 Ga0157369_10254046 3300013105 Bacteria 1834
108 Ga0157369_10428528 3300013105 Bacteria 1371
109 Ga0157374_10468008 3300013296 Bacteria 1263
110 Ga0157374_10756447 3300013296 Bacteria 986
111 Ga0157378_10131626 3300013297 Bacteria 2316
112 Ga0163162_10024265 3300013306 Bacteria 5985
113 Ga0163162_11255920 3300013306 Unclassified 841
114 Ga0157372_11082598 3300013307 Unclassified 927
115 Ga0157375_10749451 3300013308 Bacteria 1128
116 Ga0157380_10590555 3300014326 Bacteria 1097
117 Ga0157380_10751225 3300014326 Bacteria 987
118 Ga0157379_10429092 3300014968 Bacteria 1218
119 Ga0157376_10003132 3300014969 Bacteria 11364
120 Ga0157376_10096879 3300014969 Bacteria 2568
121 Ga0157376_10310675 3300014969 Unclassified 1495
122 Ga0163161_10321142 3300017792 Bacteria 1224
123 Ga0213872_10000293 3300021361 Bacteria 42523
124 Ga0213875_10045656 3300021388 Bacteria 2057
125 Ga0213871_10000068 3300021441 Bacteria 8590
126 Ga0207697_10011874 3300025315 Bacteria 3670
127 Ga0207697_10094260 3300025315 Bacteria 1271
128 Ga0207688_10002785 3300025901 Bacteria 9483
129 Ga0207680_10208094 3300025903 Bacteria 1336
130 Ga0207645_10011899 3300025907 Bacteria 5922
131 Ga0207705_10185142 3300025909 Bacteria 1573
132 Ga0207654_10460822 3300025911 Unclassified 893
133 Ga0207707_10000974 3300025912 Bacteria 27522
134 Ga0207707_10036411 3300025912 Bacteria 4302
135 Ga0207707_10336999 3300025912 Bacteria 1301
136 Ga0207695_10010444 3300025913 Bacteria 11355
137 Ga0207695_10151274 3300025913 Bacteria 2260
138 Ga0207671_10012814 3300025914 Bacteria 6719
139 Ga0207663_10518008 3300025916 Bacteria 928
140 Ga0207660_10023544 3300025917 Bacteria 4161
141 Ga0207660_10082041 3300025917 Bacteria 2371
142 Ga0207660_10439582 3300025917 Bacteria 1054
143 Ga0207662_10191610 3300025918 Unclassified 1320
144 Ga0207649_10626746 3300025920 Unclassified 829
145 Ga0207649_10672734 3300025920 Unclassified 801
146 Ga0207652_10041750 3300025921 Bacteria 3901
147 Ga0207652_10099770 3300025921 Bacteria 2563
148 Ga0207652_10272543 3300025921 Bacteria 1526
149 Ga0207650_10001634 3300025925 Bacteria 15960
150 Ga0207659_10014165 3300025926 Bacteria 5135
151 Ga0207687_10147906 3300025927 Bacteria 1789
152 Ga0207687_10538541 3300025927 Unclassified 978
153 Ga0207700_10252704 3300025928 Bacteria 1506
154 Ga0207644_10296377 3300025931 Bacteria 1302
155 Ga0207644_10507306 3300025931 Bacteria 995
156 Ga0207686_10001884 3300025934 Bacteria 11625
157 Ga0207669_10315637 3300025937 Bacteria 1194
158 Ga0207691_10011070 3300025940 Bacteria 8659
159 Ga0207691_10139820 3300025940 Bacteria 2134
160 Ga0207691_10161684 3300025940 Bacteria 1964
161 Ga0207711_10070818 3300025941 Unclassified 3025
162 Ga0207711_10302831 3300025941 Bacteria 1474
163 Ga0207711_10701896 3300025941 Unclassified 944
164 Ga0207711_10756673 3300025941 Bacteria 905
165 Ga0207661_10037694 3300025944 Bacteria 3783
166 Ga0207679_10009522 3300025945 Bacteria 6227
167 Ga0207679_10480092 3300025945 Unclassified 1106
168 Ga0207667_10868571 3300025949 Bacteria 895
169 Ga0207651_10131553 3300025960 Unclassified 1916
170 Ga0207668_10114106 3300025972 Bacteria 2033
171 Ga0207658_10145308 3300025986 Unclassified 1925
172 Ga0207703_10096441 3300026035 Bacteria 2497
173 Ga0207678_10019043 3300026067 Bacteria 6029
174 Ga0207648_10121246 3300026089 Bacteria 2299
175 Ga0207676_10425514 3300026095 Unclassified 1246
176 Ga0207675_100057433 3300026118 Bacteria 3631
177 Ga0207683_10004346 3300026121 Bacteria 12238
178 Ga0209983_1029333 3300027665 Bacteria 1169
179 Ga0268266_10075211 3300028379 Bacteria 2934
180 Ga0268266_10090912 3300028379 Unclassified 2675
181 Ga0268266_10568716 3300028379 Bacteria 1087
182 Ga0268264_10275466 3300028381 Bacteria 1574
183 Ga0268264_10314508 3300028381 Bacteria 1479
184 Ga0268264_10682181 3300028381 Bacteria 1019
185 Ga0265318_10004155 3300028577 Bacteria 7079
186 Ga0265323_10003486 3300028653 Bacteria 6937
187 Ga0265323_10025729 3300028653 Bacteria 2223
188 Ga0265322_10014564 3300028654 Bacteria 2272
189 Ga0265322_10023280 3300028654 Bacteria 1771
190 Ga0307515_10144239 3300028794 Bacteria 2533
191 Ga0307515_10166436 3300028794 Bacteria 2220
192 Ga0265338_10000042 3300028800 Bacteria 226810
193 Ga0265330_10028939 3300031235 Bacteria 2494
194 Ga0265330_10243403 3300031235 Bacteria 758
195 Ga0265320_10003876 3300031240 Bacteria 9904
196 Ga0265331_10175349 3300031250 Bacteria 969
197 Ga0265331_10215182 3300031250 Bacteria 864
198 Ga0265316_10001880 3300031344 Bacteria 22044
199 Ga0265316_10028787 3300031344 Bacteria 4577
200 Ga0265316_10029648 3300031344 Bacteria 4494
201 Ga0265316_10094962 3300031344 Bacteria 2271
202 Ga0265316_10473552 3300031344 Bacteria 897
203 Ga0265314_10007393 3300031711 Bacteria 9527
204 Ga0265342_10022805 3300031712 Bacteria 3974
205 Ga0373926_0048042 3300035083 Bacteria 1534
206 Ga0373932_0101689 3300035112 Bacteria 936
207 Ga0373936_0074520 3300035113 Bacteria 1404
208 Ga0373953_0058197 3300035117 Bacteria 1575
209 Ga0373931_0092805 3300035691 Bacteria 1685
210 Ga0373935_0009868 3300035692 Bacteria 5719
211 Ga0373935_0157104 3300035692 Bacteria 1547
212 Ga0373935_0535421 3300035692 Bacteria 853
213 Ga0373927_0094474 3300035695 Bacteria 1943
214 Ga0373927_0303473 3300035695 Bacteria 1051
215 Ga0373933_0027424 3300035724 Bacteria 3279
216 Ga0373947_0094025 3300035725 Bacteria 1874
217 Ga0373937_0212382 3300036401 Bacteria 1821
218 Ga0373925_0025549 3300037068 Bacteria 4316
219 Ga0373925_0040740 3300037068 Unclassified 3440
220 Ga0395900_0156718 3300037418 Bacteria 2326
221 Ga0395898_0080669 3300037466 Bacteria 3138
222 Ga0436364_0653105 3300037853 Unclassified 1039
223 Ga0436364_1559895 3300037853 Bacteria 17342
224 Ga0436365_0752155 3300039437 Unclassified 798
225 Ga0436360_1286234 3300039438 Bacteria 20515
226 Ga0436361_0474393 3300039447 Bacteria 166415
227 Ga0436362_1073801 3300039453 Unclassified 1242
228 Ga0439458_0028746 3300042157 Bacteria 1317
229 Ga0439444_0064704 3300042437 Unclassified 771
230 Ga0451577_0333958 3300042876 Bacteria 1375
231 Ga0451577_0571284 3300042876 Unclassified 1026
232 Ga0453684_0614244 3300044712 Bacteria 1190
233 Ga0453684_0638028 3300044712 Bacteria 1163
234 Ga0451576_0278621 3300045051 Bacteria 1748
235 Ga0451576_0455310 3300045051 Bacteria 1343
236 Ga0451576_1274059 3300045051 Bacteria 767
237 Ga0495580_0132085 3300046472 Unclassified 1731
238 Ga0495580_0139293 3300046472 Bacteria 1682
239 Ga0495582_0194786 3300046473 Bacteria 1157
240 Ga0495630_0123470 3300046517 Bacteria 1965
241 Ga0495586_0252805 3300046535 Bacteria 1006
242 Ga0495586_0284206 3300046535 Bacteria 947
243 Ga0495670_0090474 3300046691 Bacteria 1566
244 Ga0496101_0342719 3300048904 Bacteria 1174
245 Ga0496104_0085728 3300048907 Bacteria 3006
246 Ga0496104_0346728 3300048907 Bacteria 1398
247 Ga0496107_0032137 3300048910 Unclassified 3750
248 Ga0496108_0443399 3300048911 Bacteria 1134
249 Ga0496109_0348445 3300048912 Bacteria 1399
250 Ga0496110_0356895 3300048913 Bacteria 1332
251 Ga0496112_0005450 3300048915 Bacteria 11009
252 Ga0496112_0064313 3300048915 Bacteria 3620
253 Ga0501034_0420071 3300049571 Bacteria 1258
254 Ga0501034_0777918 3300049571 Unclassified 851
255 Ga0501036_0194816 3300049572 Unclassified 1705
256 Ga0501037_0124233 3300049573 Bacteria 1854
257 Ga0501038_0882995 3300049574 Unclassified 661
258 Ga0501040_0511105 3300049576 Unclassified 866
259 Ga0501041_0257264 3300049577 Bacteria 1098
260 Ga0501047_0039486 3300049581 Bacteria 4565
261 Ga0501047_0331867 3300049581 Bacteria 1359
262 Ga0501071_0041852 3300049587 Bacteria 3281
263 Ga0501075_0002193 3300049591 Bacteria 12925
264 Ga0501076_0014826 3300049592 Bacteria 5880
265 Ga0501077_0076923 3300049593 Unclassified 2114
266 Ga0501079_0026298 3300049741 Bacteria 4462
267 Ga0501079_0303179 3300049741 Bacteria 1250
268 Ga0501079_0321681 3300049741 Bacteria 1211
269 Ga0501079_0477218 3300049741 Unclassified 980
270 Ga0501080_0014253 3300049742 Bacteria 7320
271 Ga0501080_0027828 3300049742 Bacteria 5256
272 Ga0501081_0001512 3300049743 Bacteria 14285
273 Ga0501083_0316465 3300049744 Unclassified 1015
274 Ga0501035_0271901 3300049822 Bacteria 1434
275 Ga0501044_0000986 3300049823 Bacteria 34202
276 Ga0501044_0004109 3300049823 Bacteria 16324
277 Ga0501044_0020513 3300049823 Bacteria 7058
278 Ga0501044_0103539 3300049823 Bacteria 2861
279 nmdc:mga09592_74601_c2 3300050508 Bacteria 1570
280 nmdc:mga0qj67_237256_c1 3300050509 Bacteria 1479
281 nmdc:mga06r32_336344_c1 3300050510 Bacteria 1495
282 nmdc:mga06r32_80999_c1 3300050510 Bacteria 3161
283 nmdc:mga08y16_925596_c1 3300050511 Unclassified 856
284 nmdc:mga0n895_112461_c1 3300050512 Unclassified 2740
285 nmdc:mga0n895_16406_c1 3300050512 Bacteria 6795
286 nmdc:mga0n895_7883_c1 3300050512 Bacteria 9183
287 nmdc:mga0rr50_204526_c1 3300050513 Bacteria 1624
288 nmdc:mga0rr50_6751_c1 3300050513 Bacteria 7027
289 nmdc:mga08x19_521022_c1 3300050514 Unclassified 840
290 nmdc:mga0a205_16711_c1 3300050515 Bacteria 6871
291 nmdc:mga0a205_87254_c1 3300050515 Bacteria 2630
292 nmdc:mga0a205_92156_c1 3300050515 Bacteria 2928
293 Ga0500568_0001784 3300053139 Bacteria 13268
294 Ga0501082_0034794 3300060353 Bacteria 4342
295 Ga0501082_0820377 3300060353 Unclassified 814
296 Ga0530510_0163756 3300061734 Bacteria 1646
297 2787438689 2786546517 Bacteria 6614109
298 Ga0070679_100078865
299 Ga0065704_10113173
300 Ga0065712_10000197
301 Ga0065712_10068910
302 Ga0065715_10090390
303 Ga0070683_100049681
304 Ga0070690_100058648
305 Ga0070670_100001502
306 Ga0068869_100339976
307 Ga0070680_100004256
308 Ga0070680_100024479
309 Ga0070680_100086637
310 Ga0070680_100397377
311 Ga0068868_100106781
312 Ga0070689_100373932
313 Ga0070691_10109731
314 Ga0070687_100018060
315 Ga0070661_100034652
316 Ga0070692_10210746
317 Ga0070668_100086310
318 Ga0070668_100375058
319 Ga0070669_100397823
320 Ga0070675_100819228
321 Ga0070671_100334497
322 Ga0070673_100159696
323 Ga0070673_100433997
324 Ga0070688_100130570
325 Ga0070667_100210085
326 Ga0070667_100266137
327 Ga0070713_100240147
328 Ga0070694_100057395
329 Ga0070663_100011933
330 Ga0070681_10001865
331 Ga0070681_10199159
332 Ga0070706_100046788
333 Ga0070699_100096227
334 Ga0070679_100022334
335 Ga0070679_100033615
336 Ga0070679_100308404
337 Ga0070684_100239086
338 Ga0070684_100687959
339 Ga0070697_100033572
340 Ga0068853_100273507
341 Ga0070672_100422381
342 Ga0070672_100520184
343 Ga0070672_100687099
344 Ga0070686_100253231
345 Ga0070695_100288262
346 Ga0070696_100328315
347 Ga0070696_100354763
348 Ga0070665_100052934
349 Ga0070665_100103440
350 Ga0070665_100108933
351 Ga0070664_100007514
352 Ga0070664_100144004
353 Ga0068854_100038995
354 Ga0068856_100508605
355 Ga0070702_100190046
356 Ga0068864_100451648
357 Ga0068864_100804309
358 Ga0068861_100367476
359 Ga0068861_100761081
360 Ga0068858_100118201
361 Ga0068860_100422991
362 Ga0081538_10002212
363 Ga0081538_10069432
364 Ga0081540_1159545
365 Ga0081539_10023516
366 Ga0070717_10599355
367 Ga0097621_100948636
368 Ga0075428_100025583
369 Ga0075430_100057969
370 Ga0075430_100264503
371 Ga0075431_100008094
372 Ga0075431_100087419
373 Ga0075431_100198140
374 Ga0075433_10115923
375 Ga0075434_100001013
376 Ga0075434_100034717
377 Ga0068865_100400103
378 Ga0075435_100002540
379 Ga0075435_100710656
380 Ga0105240_10931724
381 Ga0111539_10348824
382 Ga0111539_10661529
383 Ga0105245_10150152
384 Ga0105245_10522248
385 Ga0105245_10708860
386 Ga0114129_10016537
387 Ga0105243_10140036
388 Ga0105242_10494858
389 Ga0105242_11096282
390 Ga0105248_10080555
391 Ga0105248_10210622
392 Ga0105248_10330389
393 Ga0105248_10355059
394 Ga0105248_10788768
395 Ga0105237_10002749
396 Ga0105237_10068126
397 Ga0105239_10034556
398 Ga0105239_10628718
399 Ga0105239_10811008
400 Ga0105246_10132474
401 Ga0157373_10081607
402 Ga0157370_10016449
403 Ga0157370_10217939
404 Ga0157369_10254046
405 Ga0157369_10428528
406 Ga0157374_10468008
407 Ga0157374_10756447
408 Ga0157378_10131626
409 Ga0163162_10024265
410 Ga0163162_11255920
411 Ga0157372_11082598
412 Ga0157375_10749451
413 Ga0157380_10590555
414 Ga0157380_10751225
415 Ga0157379_10429092
416 Ga0157376_10003132
417 Ga0157376_10096879
418 Ga0157376_10310675
419 Ga0163161_10321142
420 Ga0213872_10000293
421 Ga0213875_10045656
422 Ga0213871_10000068
423 Ga0207697_10011874
424 Ga0207697_10094260
425 Ga0207688_10002785
426 Ga0207680_10208094
427 Ga0207645_10011899
428 Ga0207705_10185142
429 Ga0207654_10460822
430 Ga0207707_10000974
431 Ga0207707_10036411
432 Ga0207707_10336999
433 Ga0207695_10010444
434 Ga0207695_10151274
435 Ga0207671_10012814
436 Ga0207663_10518008
437 Ga0207660_10023544
438 Ga0207660_10082041
439 Ga0207660_10439582
440 Ga0207662_10191610
441 Ga0207649_10626746
442 Ga0207649_10672734
443 Ga0207652_10041750
444 Ga0207652_10099770
445 Ga0207652_10272543
446 Ga0207650_10001634
447 Ga0207659_10014165
448 Ga0207687_10147906
449 Ga0207687_10538541
450 Ga0207700_10252704
451 Ga0207644_10296377
452 Ga0207644_10507306
453 Ga0207686_10001884
454 Ga0207669_10315637
455 Ga0207691_10011070
456 Ga0207691_10139820
457 Ga0207691_10161684
458 Ga0207711_10070818
459 Ga0207711_10302831
460 Ga0207711_10701896
461 Ga0207711_10756673
462 Ga0207661_10037694
463 Ga0207679_10009522
464 Ga0207679_10480092
465 Ga0207667_10868571
466 Ga0207651_10131553
467 Ga0207668_10114106
468 Ga0207658_10145308
469 Ga0207703_10096441
470 Ga0207678_10019043
471 Ga0207648_10121246
472 Ga0207676_10425514
473 Ga0207675_100057433
474 Ga0207683_10004346
475 Ga0209983_1029333
476 Ga0268266_10075211
477 Ga0268266_10090912
478 Ga0268266_10568716
479 Ga0268264_10275466
480 Ga0268264_10314508
481 Ga0268264_10682181
482 Ga0265318_10004155
483 Ga0265323_10003486
484 Ga0265323_10025729
485 Ga0265322_10014564
486 Ga0265322_10023280
487 Ga0307515_10144239
488 Ga0307515_10166436
489 Ga0265338_10000042
490 Ga0265330_10028939
491 Ga0265330_10243403
492 Ga0265320_10003876
493 Ga0265331_10175349
494 Ga0265331_10215182
495 Ga0265316_10001880
496 Ga0265316_10028787
497 Ga0265316_10029648
498 Ga0265316_10094962
499 Ga0265316_10473552
500 Ga0265314_10007393
501 Ga0265342_10022805
502 Ga0373926_0048042
503 Ga0373932_0101689
504 Ga0373936_0074520
505 Ga0373953_0058197
506 Ga0373931_0092805
507 Ga0373935_0009868
508 Ga0373935_0157104
509 Ga0373935_0535421
510 Ga0373927_0094474
511 Ga0373927_0303473
512 Ga0373933_0027424
513 Ga0373947_0094025
514 Ga0373937_0212382
515 Ga0373925_0025549
516 Ga0373925_0040740
517 Ga0395900_0156718
518 Ga0395898_0080669
519 Ga0436364_0653105
520 Ga0436364_1559895
521 Ga0436365_0752155
522 Ga0436360_1286234
523 Ga0436361_0474393
524 Ga0436362_1073801
525 Ga0439458_0028746
526 Ga0439444_0064704
527 Ga0451577_0333958
528 Ga0451577_0571284
529 Ga0453684_0614244
530 Ga0453684_0638028
531 Ga0451576_0278621
532 Ga0451576_0455310
533 Ga0451576_1274059
534 Ga0495580_0132085
535 Ga0495580_0139293
536 Ga0495582_0194786
537 Ga0495630_0123470
538 Ga0495586_0252805
539 Ga0495586_0284206
540 Ga0495670_0090474
541 Ga0496101_0342719
542 Ga0496104_0085728
543 Ga0496104_0346728
544 Ga0496107_0032137
545 Ga0496108_0443399
546 Ga0496109_0348445
547 Ga0496110_0356895
548 Ga0496112_0005450
549 Ga0496112_0064313
550 Ga0501034_0420071
551 Ga0501034_0777918
552 Ga0501036_0194816
553 Ga0501037_0124233
554 Ga0501038_0882995
555 Ga0501040_0511105
556 Ga0501041_0257264
557 Ga0501047_0039486
558 Ga0501047_0331867
559 Ga0501071_0041852
560 Ga0501075_0002193
561 Ga0501076_0014826
562 Ga0501077_0076923
563 Ga0501079_0026298
564 Ga0501079_0303179
565 Ga0501079_0321681
566 Ga0501079_0477218
567 Ga0501080_0014253
568 Ga0501080_0027828
569 Ga0501081_0001512
570 Ga0501083_0316465
571 Ga0501035_0271901
572 Ga0501044_0000986
573 Ga0501044_0004109
574 Ga0501044_0020513
575 Ga0501044_0103539
576 nmdc:mga09592_74601_c2
577 nmdc:mga0qj67_237256_c1
578 nmdc:mga06r32_336344_c1
579 nmdc:mga06r32_80999_c1
580 nmdc:mga08y16_925596_c1
581 nmdc:mga0n895_112461_c1
582 nmdc:mga0n895_16406_c1
583 nmdc:mga0n895_7883_c1
584 nmdc:mga0rr50_204526_c1
585 nmdc:mga0rr50_6751_c1
586 nmdc:mga08x19_521022_c1
587 nmdc:mga0a205_16711_c1
588 nmdc:mga0a205_87254_c1
589 nmdc:mga0a205_92156_c1
590 Ga0500568_0001784
591 Ga0501082_0034794
592 Ga0501082_0820377
593 Ga0530510_0163756
594 2787438689

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

54

147

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5tgs-assembly1.cif.gz_A crystal structure of quee from bacillus subtilis with methionine bound 0.7976 1 222
5tgs-assembly1.cif.gz_A crystal structure of quee from bacillus subtilis with methionine bound 0.7746 1 222
5tgs-assembly1.cif.gz_B crystal structure of quee from bacillus subtilis with methionine bound 0.7742 1 224
5tgs-assembly1.cif.gz_B crystal structure of quee from bacillus subtilis with methionine bound 0.7585 1 224
4njh-assembly1.cif.gz_B crystal structure of quee from burkholderia multivorans in complex with adomet and 6-carboxy-5,6,7,8-tetrahydropterin 0.7543 2 221
ID Description Score Start End Superfamily
af_Q2G1X7_4_231_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8277 1 222 3.20.20.70
4njjA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7518 2 221 3.20.20.70
4njjA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7318 2 221 3.20.20.70
af_P64554_2_223_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7294 2 221 3.20.20.70
af_Q2FX16_20_293_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7281 29 209 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A2V5UUU2-F1-model_v4 Radical SAM protein 0.9994 93 228
AF-A0A1F9DTF5-F1-model_v4 Radical SAM core domain-containing protein 0.9965 70 228 GO:0003824
GO:0046872
GO:0051539
AF-A0A534S9R5-F1-model_v4 7-carboxy-7-deazaguanine synthase (CDG synthase) (EC 4.3.99.3) (Queuosine biosynthesis protein QueE) 0.9897 1 228 GO:0000287
GO:0008616
GO:0016840
GO:0051539
GO:1904047
AF-A0A2V5UUU2-F1-model_v4 Radical SAM protein 0.985 93 228
AF-A0A2M7KSU4-F1-model_v4 7-carboxy-7-deazaguanine synthase (CDG synthase) (EC 4.3.99.3) (Queuosine biosynthesis protein QueE) 0.9848 1 228 GO:0000287
GO:0008616
GO:0016840
GO:0051539
GO:1904047

Map