F393579

General Info

Members Datasets Scaffolds Average Seq Length
297 188 594 306

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100044810|Ga0070714_1000448104
Length 330
Sequence MPLICQFIASRRQEYGVAPICRALSVLGVPIAPRTYRAHLARPPSKRALWDAAITEVLAGHYEPDEQGRRPPECLYGATKMWAHLNREGIEVARCTVERLMRANGWRGATRARKVRTTVADPAATRAPDLVNRQFHAAAPGLLHVADFTYVPLAGGGFGYTAFVIDAYAGLIPGWECSTSTHTAFVEAAIRQAVAYRRRQGRPLGEGAIHHSDAGSQYTAVHFGQTLFLEGLTSSIGSVGDAYDNALAETTIGLYKTECVRADSPFRHGPIHTLADLEEITSTWVHWYNTRRLMHRLGRIPPTEAEAAYYAPTDAATPAASHTNYQHERK

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
11 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
12 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
36 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
47 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
49 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
53 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
54 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
55 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
60 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
61 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
62 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
63 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
64 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
65 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
66 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
67 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
68 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
69 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
70 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
71 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
72 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
73 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
74 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
75 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
76 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
77 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
78 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
82 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
83 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
89 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
90 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
91 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
92 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
93 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
94 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
95 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
96 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
97 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
98 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
99 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
100 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
104 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
105 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
106 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
109 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
110 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
113 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
114 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
115 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
116 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
117 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
123 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
124 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
125 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
126 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
129 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
130 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
131 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
161 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
162 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
163 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
164 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
165 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
171 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
176 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
179 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
182 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
186 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
187 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
188 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.32
Metatranscriptomes 0
Isolates 1.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.34
Rhizoplane 4.71
Rhizosphere 93.27
Stem 0
Stem Tuber 0
Unclassified 3.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100044810 3300005435 Bacteria 3746
2 Ga0070658_10266739 3300005327 Bacteria 1455
3 Ga0068869_100373421 3300005334 Bacteria 1167
4 Ga0070668_100092356 3300005347 Bacteria 2387
5 Ga0070669_100225762 3300005353 Bacteria 1482
6 Ga0070711_100230222 3300005439 Bacteria 1444
7 Ga0070705_100104203 3300005440 Bacteria 1798
8 Ga0070700_100169124 3300005441 Bacteria 1512
9 Ga0070708_100066553 3300005445 Bacteria 3234
10 Ga0070708_100217707 3300005445 Bacteria 1790
11 Ga0068861_100184130 3300005719 Bacteria 1741
12 Ga0068858_100149135 3300005842 Bacteria 2198
13 Ga0068862_100336158 3300005844 Bacteria 1398
14 Ga0081455_10001480 3300005937 Bacteria 29049
15 Ga0081455_10116718 3300005937 Bacteria 2110
16 Ga0081538_10039648 3300005981 Bacteria 3018
17 Ga0081538_10079400 3300005981 Bacteria 1756
18 Ga0081539_10088011 3300005985 Bacteria 1612
19 Ga0070715_10050418 3300006163 Unclassified 1787
20 Ga0075428_100095673 3300006844 Bacteria 3237
21 Ga0075430_100080792 3300006846 Bacteria 2723
22 Ga0075430_100209970 3300006846 Bacteria 1615
23 Ga0075431_100111767 3300006847 Bacteria 2819
24 Ga0075433_10222134 3300006852 Bacteria 1678
25 Ga0075433_10356752 3300006852 Unclassified 1292
26 Ga0075434_100276184 3300006871 Bacteria 1699
27 Ga0075429_100098470 3300006880 Bacteria 2551
28 Ga0075429_100129715 3300006880 Bacteria 2205
29 Ga0075436_100353518 3300006914 Unclassified 1059
30 Ga0075435_100174579 3300007076 Bacteria 1814
31 Ga0075435_100225751 3300007076 Unclassified 1591
32 Ga0105240_10310964 3300009093 Bacteria 1799
33 Ga0111539_10427956 3300009094 Bacteria 1541
34 Ga0111539_10459810 3300009094 Bacteria 1482
35 Ga0105247_10157801 3300009101 Bacteria 1500
36 Ga0114129_10543724 3300009147 Bacteria 1511
37 Ga0105249_10150572 3300009553 Bacteria 2240
38 Ga0105249_10175362 3300009553 Bacteria 2082
39 Ga0157369_10153717 3300013105 Bacteria 2431
40 Ga0157374_10346011 3300013296 Bacteria 1476
41 Ga0163162_10319041 3300013306 Bacteria 1686
42 Ga0157372_10400639 3300013307 Bacteria 1599
43 Ga0157380_10315211 3300014326 Bacteria 1447
44 Ga0213874_10009212 3300021377 Bacteria 2434
45 Ga0213874_10016371 3300021377 Bacteria 1972
46 Ga0207692_10067475 3300025898 Bacteria 1873
47 Ga0207684_10145620 3300025910 Bacteria 2037
48 Ga0207646_10177484 3300025922 Bacteria 1924
49 Ga0207664_10319985 3300025929 Bacteria 1369
50 Ga0207704_10350437 3300025938 Bacteria 1149
51 Ga0207712_10089112 3300025961 Bacteria 2267
52 Ga0207668_10108099 3300025972 Bacteria 2081
53 Ga0207677_10235513 3300026023 Bacteria 1478
54 Ga0207703_10150286 3300026035 Bacteria 2030
55 Ga0207703_10345910 3300026035 Bacteria 1368
56 Ga0207675_100186894 3300026118 Bacteria 1986
57 Ga0209389_1052430 3300027296 Bacteria 2772
58 Ga0209998_10018172 3300027717 Bacteria 1491
59 Ga0207428_10325121 3300027907 Bacteria 1135
60 Ga0268265_10201392 3300028380 Bacteria 1727
61 Ga0307408_100141743 3300031548 Bacteria 1887
62 Ga0307408_100219931 3300031548 Bacteria 1549
63 Ga0316576_10186517 3300031727 Bacteria 1564
64 Ga0316578_10138165 3300031728 Bacteria 1467
65 Ga0307405_10056584 3300031731 Bacteria 2460
66 Ga0307405_10087701 3300031731 Bacteria 2051
67 Ga0307405_10153702 3300031731 Bacteria 1621
68 Ga0316577_10048145 3300031733 Bacteria 2381
69 Ga0307413_10000437 3300031824 Bacteria 13547
70 Ga0307410_10030225 3300031852 Bacteria 3459
71 Ga0307410_10055725 3300031852 Bacteria 2685
72 Ga0307406_10028570 3300031901 Bacteria 3370
73 Ga0307406_10185448 3300031901 Bacteria 1518
74 Ga0307407_10113164 3300031903 Bacteria 1707
75 Ga0307412_10187664 3300031911 Bacteria 1560
76 Ga0307409_100001592 3300031995 Bacteria 11338
77 Ga0307409_100004869 3300031995 Bacteria 7630
78 Ga0307409_100220052 3300031995 Bacteria 1713
79 Ga0307416_100128433 3300032002 Bacteria 2275
80 Ga0307416_100239272 3300032002 Bacteria 1757
81 Ga0307416_100357200 3300032002 Bacteria 1481
82 Ga0307411_10228923 3300032005 Bacteria 1447
83 Ga0307415_100002582 3300032126 Bacteria 9047
84 Ga0307415_100191983 3300032126 Bacteria 1612
85 Ga0307415_100268080 3300032126 Bacteria 1397
86 Ga0316583_10046841 3300032133 Bacteria 1525
87 Ga0316585_10040959 3300032137 Bacteria 1475
88 Ga0316580_10062818 3300032139 Bacteria 1140
89 Ga0373934_0002947 3300035086 Bacteria 6228
90 Ga0373934_0012961 3300035086 Unclassified 3150
91 Ga0373923_0090412 3300035111 Bacteria 1338
92 Ga0373936_0083546 3300035113 Bacteria 1331
93 Ga0373953_0000374 3300035117 Bacteria 12105
94 Ga0373953_0000421 3300035117 Bacteria 11537
95 Ga0373954_0036507 3300035118 Bacteria 2281
96 Ga0373956_0001521 3300035119 Bacteria 9583
97 Ga0373956_0026245 3300035119 Bacteria 2522
98 Ga0373957_0022227 3300035120 Unclassified 2258
99 Ga0373957_0032588 3300035120 Bacteria 1920
100 Ga0373957_0051413 3300035120 Bacteria 1576
101 Ga0373957_0066768 3300035120 Bacteria 1401
102 Ga0373943_0192520 3300035170 Bacteria 1125
103 Ga0373955_0002773 3300035172 Bacteria 7685
104 Ga0373955_0055477 3300035172 Bacteria 2170
105 Ga0316574_0152583 3300035398 Bacteria 1488
106 Ga0373924_0006124 3300035410 Unclassified 4294
107 Ga0373924_0009226 3300035410 Bacteria 3611
108 Ga0373924_0054521 3300035410 Bacteria 1662
109 Ga0373935_0062394 3300035692 Bacteria 2387
110 Ga0373935_0104290 3300035692 Bacteria 1874
111 Ga0373933_0002355 3300035724 Bacteria 10694
112 Ga0373933_0142571 3300035724 Bacteria 1513
113 Ga0373933_0188085 3300035724 Bacteria 1318
114 Ga0373937_0012275 3300036401 Bacteria 7529
115 Ga0373937_0209549 3300036401 Bacteria 1833
116 Ga0373937_0323379 3300036401 Bacteria 1459
117 Ga0373937_0356162 3300036401 Bacteria 1386
118 Ga0373937_0417565 3300036401 Bacteria 1273
119 Ga0316582_0060256 3300036647 Bacteria 2433
120 Ga0316582_0151544 3300036647 Bacteria 1567
121 Ga0316584_0022500 3300036712 Bacteria 4597
122 Ga0373925_0204446 3300037068 Bacteria 1571
123 Ga0373925_0283986 3300037068 Bacteria 1333
124 Ga0395900_0373118 3300037418 Bacteria 1396
125 Ga0395898_0310904 3300037466 Bacteria 1503
126 Ga0316581_0064585 3300037588 Bacteria 1124
127 Ga0395901_0272326 3300038443 Bacteria 1761
128 Ga0395901_0373280 3300038443 Bacteria 1469
129 Ga0436363_0040818 3300039450 Bacteria 3601
130 Ga0436363_0593719 3300039450 Bacteria 1906
131 Ga0436363_0914977 3300039450 Bacteria 1985
132 Ga0439439_0030140 3300041406 Bacteria 1378
133 Ga0439466_0050896 3300041411 Bacteria 1357
134 Ga0439465_0059803 3300041413 Bacteria 1261
135 Ga0439442_039284 3300042002 Bacteria 992
136 Ga0439432_054153 3300042006 Bacteria 1246
137 Ga0439452_025144 3300042010 Bacteria 1514
138 Ga0450919_006068 3300042121 Bacteria 1435
139 Ga0450922_003433 3300042124 Bacteria 1460
140 Ga0450923_012212 3300042125 Bacteria 1559
141 Ga0450923_059945 3300042125 Bacteria 829
142 Ga0439446_0044670 3300042156 Bacteria 1311
143 Ga0450908_018155 3300042184 Bacteria 1245
144 Ga0450909_005127 3300042185 Bacteria 1883
145 Ga0466969_0101368 3300044656 Bacteria 1355
146 Ga0466972_0097934 3300044658 Bacteria 1389
147 Ga0466968_0058790 3300044735 Bacteria 1655
148 Ga0466970_0074418 3300044765 Bacteria 1828
149 Ga0466967_0273894 3300045976 Bacteria 1618
150 Ga0495592_0005231 3300046454 Bacteria 9570
151 Ga0495592_0151358 3300046454 Bacteria 1604
152 Ga0495629_0176730 3300046459 Bacteria 1480
153 Ga0495651_0005571 3300046462 Bacteria 9598
154 Ga0495653_0020489 3300046463 Bacteria 5360
155 Ga0495653_0058338 3300046463 Unclassified 2934
156 Ga0495580_0191512 3300046472 Bacteria 1410
157 Ga0495608_0004876 3300046511 Bacteria 9598
158 Ga0495608_0052197 3300046511 Bacteria 2707
159 Ga0495608_0149031 3300046511 Bacteria 1491
160 Ga0495608_0184117 3300046511 Bacteria 1320
161 Ga0495618_0054072 3300046514 Bacteria 2539
162 Ga0495618_0106017 3300046514 Bacteria 1799
163 Ga0495628_0032128 3300046516 Bacteria 4240
164 Ga0495628_0198006 3300046516 Bacteria 1514
165 Ga0495628_0326853 3300046516 Bacteria 1131
166 Ga0495652_0008171 3300046529 Bacteria 9570
167 Ga0495652_0226910 3300046529 Bacteria 1399
168 Ga0495652_0361487 3300046529 Bacteria 1037
169 Ga0495665_0182347 3300046531 Bacteria 1091
170 Ga0495586_0130045 3300046535 Bacteria 1409
171 Ga0495587_0004135 3300046536 Bacteria 9598
172 Ga0495587_0041840 3300046536 Bacteria 2733
173 Ga0495645_0030616 3300046543 Bacteria 3920
174 Ga0495645_0108419 3300046543 Bacteria 1967
175 Ga0495645_0121483 3300046543 Bacteria 1838
176 Ga0495667_0102975 3300046559 Bacteria 1846
177 Ga0495667_0164477 3300046559 Bacteria 1426
178 Ga0495667_0177330 3300046559 Bacteria 1368
179 Ga0495667_0208985 3300046559 Bacteria 1248
180 Ga0495656_0081606 3300046615 Bacteria 1460
181 Ga0495656_0119668 3300046615 Bacteria 1241
182 Ga0495634_0113186 3300046642 Bacteria 1743
183 Ga0495635_0047006 3300046663 Bacteria 2977
184 Ga0495635_0080001 3300046663 Bacteria 2237
185 Ga0495635_0179207 3300046663 Bacteria 1440
186 Ga0495657_0005932 3300046675 Bacteria 9598
187 Ga0495657_0062749 3300046675 Bacteria 2454
188 Ga0495657_0075040 3300046675 Bacteria 2198
189 Ga0495657_0156798 3300046675 Bacteria 1410
190 Ga0495599_0003197 3300046678 Bacteria 9542
191 Ga0495623_0004062 3300046679 Bacteria 9638
192 Ga0495623_0143809 3300046679 Bacteria 1416
193 Ga0495646_0103178 3300046680 Bacteria 1632
194 Ga0495646_0131947 3300046680 Bacteria 1405
195 Ga0495646_0219192 3300046680 Bacteria 1029
196 Ga0495600_0056713 3300046809 Bacteria 2559
197 Ga0495600_0190584 3300046809 Bacteria 1318
198 Ga0495581_0306460 3300047315 Bacteria 928
199 Ga0495604_0006077 3300047317 Bacteria 9580
200 Ga0495604_0147379 3300047317 Bacteria 1676
201 Ga0495604_0217113 3300047317 Bacteria 1318
202 Ga0495674_0047694 3300047319 Bacteria 3796
203 Ga0495674_0250247 3300047319 Bacteria 1458
204 Ga0495674_0376413 3300047319 Bacteria 1149
205 Ga0495674_0403387 3300047319 Bacteria 1103
206 Ga0495676_0166528 3300047321 Bacteria 1554
207 Ga0495676_0220087 3300047321 Bacteria 1309
208 Ga0495680_0008067 3300047322 Bacteria 9598
209 Ga0495680_0044441 3300047322 Bacteria 3512
210 Ga0495680_0147192 3300047322 Bacteria 1719
211 Ga0495680_0230273 3300047322 Bacteria 1319
212 Ga0495675_0006365 3300047444 Bacteria 7225
213 Ga0495675_0153171 3300047444 Bacteria 1423
214 Ga0495684_0147131 3300047471 Bacteria 1763
215 Ga0495684_0149714 3300047471 Bacteria 1745
216 Ga0495602_0010510 3300048088 Bacteria 9607
217 Ga0495602_0099766 3300048088 Bacteria 2386
218 Ga0495602_0109936 3300048088 Bacteria 2241
219 Ga0495602_0222571 3300048088 Bacteria 1423
220 Ga0496100_0227502 3300048903 Bacteria 1371
221 Ga0496101_0123708 3300048904 Bacteria 1958
222 Ga0496102_0258295 3300048905 Bacteria 1642
223 Ga0496103_0056801 3300048906 Bacteria 2430
224 Ga0496104_0298365 3300048907 Bacteria 1523
225 Ga0496105_0173425 3300048908 Bacteria 1767
226 Ga0496106_0176816 3300048909 Bacteria 1693
227 Ga0496107_0194274 3300048910 Bacteria 1508
228 Ga0496108_0221956 3300048911 Bacteria 1642
229 Ga0496109_0114247 3300048912 Bacteria 2512
230 Ga0496110_0193400 3300048913 Bacteria 1847
231 Ga0496111_0172659 3300048914 Bacteria 1606
232 Ga0496113_0212629 3300048916 Bacteria 1540
233 Ga0496114_0436361 3300048917 Bacteria 1160
234 Ga0501031_0159948 3300049568 Bacteria 1472
235 Ga0501036_0222100 3300049572 Bacteria 1586
236 Ga0501036_0381555 3300049572 Bacteria 1176
237 Ga0501037_0151992 3300049573 Bacteria 1654
238 Ga0501039_0385185 3300049575 Bacteria 1101
239 Ga0501040_0112147 3300049576 Bacteria 1907
240 Ga0501041_0168118 3300049577 Bacteria 1372
241 Ga0501041_0241770 3300049577 Bacteria 1134
242 Ga0501041_0266966 3300049577 Bacteria 1076
243 Ga0501042_0144170 3300049578 Bacteria 1717
244 Ga0501042_0158444 3300049578 Bacteria 1633
245 Ga0501046_0112251 3300049580 Bacteria 2081
246 Ga0501047_0135127 3300049581 Bacteria 2347
247 Ga0501048_0164855 3300049582 Bacteria 1569
248 Ga0501048_0180903 3300049582 Bacteria 1494
249 Ga0501067_0118805 3300049583 Bacteria 1470
250 Ga0501067_0131033 3300049583 Bacteria 1395
251 Ga0501068_0156373 3300049584 Bacteria 1435
252 Ga0501068_0156829 3300049584 Bacteria 1433
253 Ga0501069_0107802 3300049585 Bacteria 1584
254 Ga0501069_0122720 3300049585 Bacteria 1484
255 Ga0501069_0138629 3300049585 Bacteria 1395
256 Ga0501071_0186611 3300049587 Bacteria 1554
257 Ga0501072_0247909 3300049588 Bacteria 1418
258 Ga0501072_0256103 3300049588 Bacteria 1393
259 Ga0501074_0175247 3300049590 Bacteria 1530
260 Ga0501074_0555018 3300049590 Bacteria 813
261 Ga0501076_0250068 3300049592 Bacteria 1450
262 Ga0501077_0129405 3300049593 Bacteria 1600
263 Ga0501079_0176647 3300049741 Bacteria 1665
264 Ga0501080_0303028 3300049742 Bacteria 1449
265 Ga0501081_0163558 3300049743 Bacteria 1604
266 Ga0501271_006195 3300049768 Bacteria 1183
267 Ga0501035_0252842 3300049822 Bacteria 1496
268 Ga0501044_0129035 3300049823 Bacteria 2523
269 Ga0501044_0245030 3300049823 Bacteria 1735
270 nmdc:mga09592_272999_c1 3300050508 Bacteria 1467
271 nmdc:mga0qj67_116738_c1 3300050509 Bacteria 2157
272 nmdc:mga0qj67_210667_c1 3300050509 Bacteria 1579
273 nmdc:mga06r32_84984_c1 3300050510 Bacteria 3085
274 nmdc:mga08y16_279792_c1 3300050511 Bacteria 1721
275 nmdc:mga0n895_247085_c1 3300050512 Bacteria 1811
276 nmdc:mga0rr50_141452_c1 3300050513 Bacteria 1936
277 nmdc:mga0a205_259429_c1 3300050515 Bacteria 1616
278 nmdc:mga0a205_413277_c1 3300050515 Unclassified 1212
279 Ga0495601_0103595 3300053077 Bacteria 1839
280 Ga0495601_0130994 3300053077 Bacteria 1633
281 Ga0495595_0002462 3300053084 Bacteria 7236
282 Ga0495595_0071038 3300053084 Bacteria 1645
283 Ga0495595_0071769 3300053084 Bacteria 1637
284 Ga0495619_0110442 3300053085 Bacteria 1878
285 Ga0495619_0162368 3300053085 Bacteria 1543
286 Ga0495619_0183024 3300053085 Bacteria 1449
287 Ga0501084_0287473 3300054114 Bacteria 1388
288 Ga0590075_025950 3300059424 Bacteria 1475
289 Ga0501082_0259836 3300060353 Bacteria 1510
290 Ga0530510_0137602 3300061734 Bacteria 1798
291 Ga0530510_0190978 3300061734 Bacteria 1520
292 Ga0530510_0206036 3300061734 Bacteria 1461
293 651176306 651053060 Bacteria 4689946
294 651176334 651053060 Bacteria 4689946
295 651176600 651053060 Bacteria 4689946
296 651176820 651053060 Bacteria 4689946
297 651177437 651053060 Bacteria 4689946
298 Ga0070714_100044810
299 Ga0070658_10266739
300 Ga0068869_100373421
301 Ga0070668_100092356
302 Ga0070669_100225762
303 Ga0070711_100230222
304 Ga0070705_100104203
305 Ga0070700_100169124
306 Ga0070708_100066553
307 Ga0070708_100217707
308 Ga0068861_100184130
309 Ga0068858_100149135
310 Ga0068862_100336158
311 Ga0081455_10001480
312 Ga0081455_10116718
313 Ga0081538_10039648
314 Ga0081538_10079400
315 Ga0081539_10088011
316 Ga0070715_10050418
317 Ga0075428_100095673
318 Ga0075430_100080792
319 Ga0075430_100209970
320 Ga0075431_100111767
321 Ga0075433_10222134
322 Ga0075433_10356752
323 Ga0075434_100276184
324 Ga0075429_100098470
325 Ga0075429_100129715
326 Ga0075436_100353518
327 Ga0075435_100174579
328 Ga0075435_100225751
329 Ga0105240_10310964
330 Ga0111539_10427956
331 Ga0111539_10459810
332 Ga0105247_10157801
333 Ga0114129_10543724
334 Ga0105249_10150572
335 Ga0105249_10175362
336 Ga0157369_10153717
337 Ga0157374_10346011
338 Ga0163162_10319041
339 Ga0157372_10400639
340 Ga0157380_10315211
341 Ga0213874_10009212
342 Ga0213874_10016371
343 Ga0207692_10067475
344 Ga0207684_10145620
345 Ga0207646_10177484
346 Ga0207664_10319985
347 Ga0207704_10350437
348 Ga0207712_10089112
349 Ga0207668_10108099
350 Ga0207677_10235513
351 Ga0207703_10150286
352 Ga0207703_10345910
353 Ga0207675_100186894
354 Ga0209389_1052430
355 Ga0209998_10018172
356 Ga0207428_10325121
357 Ga0268265_10201392
358 Ga0307408_100141743
359 Ga0307408_100219931
360 Ga0316576_10186517
361 Ga0316578_10138165
362 Ga0307405_10056584
363 Ga0307405_10087701
364 Ga0307405_10153702
365 Ga0316577_10048145
366 Ga0307413_10000437
367 Ga0307410_10030225
368 Ga0307410_10055725
369 Ga0307406_10028570
370 Ga0307406_10185448
371 Ga0307407_10113164
372 Ga0307412_10187664
373 Ga0307409_100001592
374 Ga0307409_100004869
375 Ga0307409_100220052
376 Ga0307416_100128433
377 Ga0307416_100239272
378 Ga0307416_100357200
379 Ga0307411_10228923
380 Ga0307415_100002582
381 Ga0307415_100191983
382 Ga0307415_100268080
383 Ga0316583_10046841
384 Ga0316585_10040959
385 Ga0316580_10062818
386 Ga0373934_0002947
387 Ga0373934_0012961
388 Ga0373923_0090412
389 Ga0373936_0083546
390 Ga0373953_0000374
391 Ga0373953_0000421
392 Ga0373954_0036507
393 Ga0373956_0001521
394 Ga0373956_0026245
395 Ga0373957_0022227
396 Ga0373957_0032588
397 Ga0373957_0051413
398 Ga0373957_0066768
399 Ga0373943_0192520
400 Ga0373955_0002773
401 Ga0373955_0055477
402 Ga0316574_0152583
403 Ga0373924_0006124
404 Ga0373924_0009226
405 Ga0373924_0054521
406 Ga0373935_0062394
407 Ga0373935_0104290
408 Ga0373933_0002355
409 Ga0373933_0142571
410 Ga0373933_0188085
411 Ga0373937_0012275
412 Ga0373937_0209549
413 Ga0373937_0323379
414 Ga0373937_0356162
415 Ga0373937_0417565
416 Ga0316582_0060256
417 Ga0316582_0151544
418 Ga0316584_0022500
419 Ga0373925_0204446
420 Ga0373925_0283986
421 Ga0395900_0373118
422 Ga0395898_0310904
423 Ga0316581_0064585
424 Ga0395901_0272326
425 Ga0395901_0373280
426 Ga0436363_0040818
427 Ga0436363_0593719
428 Ga0436363_0914977
429 Ga0439439_0030140
430 Ga0439466_0050896
431 Ga0439465_0059803
432 Ga0439442_039284
433 Ga0439432_054153
434 Ga0439452_025144
435 Ga0450919_006068
436 Ga0450922_003433
437 Ga0450923_012212
438 Ga0450923_059945
439 Ga0439446_0044670
440 Ga0450908_018155
441 Ga0450909_005127
442 Ga0466969_0101368
443 Ga0466972_0097934
444 Ga0466968_0058790
445 Ga0466970_0074418
446 Ga0466967_0273894
447 Ga0495592_0005231
448 Ga0495592_0151358
449 Ga0495629_0176730
450 Ga0495651_0005571
451 Ga0495653_0020489
452 Ga0495653_0058338
453 Ga0495580_0191512
454 Ga0495608_0004876
455 Ga0495608_0052197
456 Ga0495608_0149031
457 Ga0495608_0184117
458 Ga0495618_0054072
459 Ga0495618_0106017
460 Ga0495628_0032128
461 Ga0495628_0198006
462 Ga0495628_0326853
463 Ga0495652_0008171
464 Ga0495652_0226910
465 Ga0495652_0361487
466 Ga0495665_0182347
467 Ga0495586_0130045
468 Ga0495587_0004135
469 Ga0495587_0041840
470 Ga0495645_0030616
471 Ga0495645_0108419
472 Ga0495645_0121483
473 Ga0495667_0102975
474 Ga0495667_0164477
475 Ga0495667_0177330
476 Ga0495667_0208985
477 Ga0495656_0081606
478 Ga0495656_0119668
479 Ga0495634_0113186
480 Ga0495635_0047006
481 Ga0495635_0080001
482 Ga0495635_0179207
483 Ga0495657_0005932
484 Ga0495657_0062749
485 Ga0495657_0075040
486 Ga0495657_0156798
487 Ga0495599_0003197
488 Ga0495623_0004062
489 Ga0495623_0143809
490 Ga0495646_0103178
491 Ga0495646_0131947
492 Ga0495646_0219192
493 Ga0495600_0056713
494 Ga0495600_0190584
495 Ga0495581_0306460
496 Ga0495604_0006077
497 Ga0495604_0147379
498 Ga0495604_0217113
499 Ga0495674_0047694
500 Ga0495674_0250247
501 Ga0495674_0376413
502 Ga0495674_0403387
503 Ga0495676_0166528
504 Ga0495676_0220087
505 Ga0495680_0008067
506 Ga0495680_0044441
507 Ga0495680_0147192
508 Ga0495680_0230273
509 Ga0495675_0006365
510 Ga0495675_0153171
511 Ga0495684_0147131
512 Ga0495684_0149714
513 Ga0495602_0010510
514 Ga0495602_0099766
515 Ga0495602_0109936
516 Ga0495602_0222571
517 Ga0496100_0227502
518 Ga0496101_0123708
519 Ga0496102_0258295
520 Ga0496103_0056801
521 Ga0496104_0298365
522 Ga0496105_0173425
523 Ga0496106_0176816
524 Ga0496107_0194274
525 Ga0496108_0221956
526 Ga0496109_0114247
527 Ga0496110_0193400
528 Ga0496111_0172659
529 Ga0496113_0212629
530 Ga0496114_0436361
531 Ga0501031_0159948
532 Ga0501036_0222100
533 Ga0501036_0381555
534 Ga0501037_0151992
535 Ga0501039_0385185
536 Ga0501040_0112147
537 Ga0501041_0168118
538 Ga0501041_0241770
539 Ga0501041_0266966
540 Ga0501042_0144170
541 Ga0501042_0158444
542 Ga0501046_0112251
543 Ga0501047_0135127
544 Ga0501048_0164855
545 Ga0501048_0180903
546 Ga0501067_0118805
547 Ga0501067_0131033
548 Ga0501068_0156373
549 Ga0501068_0156829
550 Ga0501069_0107802
551 Ga0501069_0122720
552 Ga0501069_0138629
553 Ga0501071_0186611
554 Ga0501072_0247909
555 Ga0501072_0256103
556 Ga0501074_0175247
557 Ga0501074_0555018
558 Ga0501076_0250068
559 Ga0501077_0129405
560 Ga0501079_0176647
561 Ga0501080_0303028
562 Ga0501081_0163558
563 Ga0501271_006195
564 Ga0501035_0252842
565 Ga0501044_0129035
566 Ga0501044_0245030
567 nmdc:mga09592_272999_c1
568 nmdc:mga0qj67_116738_c1
569 nmdc:mga0qj67_210667_c1
570 nmdc:mga06r32_84984_c1
571 nmdc:mga08y16_279792_c1
572 nmdc:mga0n895_247085_c1
573 nmdc:mga0rr50_141452_c1
574 nmdc:mga0a205_259429_c1
575 nmdc:mga0a205_413277_c1
576 Ga0495601_0103595
577 Ga0495601_0130994
578 Ga0495595_0002462
579 Ga0495595_0071038
580 Ga0495595_0071769
581 Ga0495619_0110442
582 Ga0495619_0162368
583 Ga0495619_0183024
584 Ga0501084_0287473
585 Ga0590075_025950
586 Ga0501082_0259836
587 Ga0530510_0137602
588 Ga0530510_0190978
589 Ga0530510_0206036
590 651176306
591 651176334
592 651176600
593 651176820
594 651177437

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13683

rve_3

Integrase core domain

230

302

0.93

PF00665

rve

Integrase core domain

137

242

0.9

PF13276

HTH_21

HTH-like domain

46

114

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o03-assembly1.cif.gz_A-2 crystal structure of furb from m. tuberculosis- a zinc uptake regulator 0.8618 36 89
7cqy-assembly2.cif.gz_D tetrathionate hydrolase from acidithiobacillus ferrooxidans mutant - d325n 0.8323 131 164
7cqy-assembly1.cif.gz_A tetrathionate hydrolase from acidithiobacillus ferrooxidans mutant - d325n 0.8307 131 164
6qbt-assembly1.cif.gz_A structure of the htlv-2 integrase catalytic core domain in complex with magnesium (trimeric form) 0.8085 123 284
6qbv-assembly1.cif.gz_B structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.8061 123 272
ID Description Score Start End Superfamily
af_P9WKH9_102_261_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9445 122 280 3.30.420.10
3mwmB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9378 43 90 1.10.10.10
af_P9WKH9_102_261_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9331 122 280 3.30.420.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9136 122 283 3.30.420.10
af_Q8IAU7_736_1093_2.140.10.30 Mainly Beta;8 Propeller;Methanol Dehydrogenase; Chain A;Dipeptidylpeptidase IV, N-terminal domain 0.9086 131 162 2.140.10.30
ID Description Score Start End GO Terms
AF-A0A5S3ZBB7-F1-model_v4 Integrase catalytic domain-containing protein 0.961 121 182 GO:0003676
GO:0015074
AF-A0A6H3M6X4-F1-model_v4 deleted 0.9539 138 291
AF-A0A2S7JS23-F1-model_v4 IS3 family transposase 0.9501 125 297 GO:0003676
GO:0015074
GO:0016020
AF-A0A1V4PFQ4-F1-model_v4 Transposase 0.945 137 296 GO:0003676
GO:0015074
AF-A0A370EME1-F1-model_v4 Putative transposase 0.9446 118 293 GO:0003676
GO:0015074

Map